BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002810
(877 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359473972|ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Vitis
vinifera]
Length = 1013
Score = 1275 bits (3299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/894 (70%), Positives = 743/894 (83%), Gaps = 23/894 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI DS MMENGGSCLP TP++E+QIV DL N+S+ LKEGNLY+++S RW+ SW+RY
Sbjct: 71 MTIADSG-FMMENGGSCLPYTPEQEKQIVDDLMNKSESSLKEGNLYYVVSNRWFTSWQRY 129
Query: 61 VC---GDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLE 117
+ G+ P ++S DS ++ V SK AERPGPIDNSDI+ NGN E DDLE+ R LE
Sbjct: 130 IGQGNGEYPINGHLS-DSQRLDAVPSKTAERPGPIDNSDIVLNGN-ECELDDLEILRTLE 187
Query: 118 EGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQT 176
EG+DYVLVPQ+VWEKLF WYKGGPALPRKMIS+GI ++K VE++ LCLKL DSRDNSQ+
Sbjct: 188 EGRDYVLVPQEVWEKLFDWYKGGPALPRKMISQGITHKKFMVEIYRLCLKLTDSRDNSQS 247
Query: 177 VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
VIRLSKKAS +LYE+VC L+ +EQEKARIWDYFNK R + L S+QTL+++ LQMDQD
Sbjct: 248 VIRLSKKASVHELYERVCTLKVVEQEKARIWDYFNK-RKQAILVASNQTLEESNLQMDQD 306
Query: 237 ILLEVQVD----NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEVQ+D +G MDSTGN+LALVP+EP RSS++IAGGP LSNG++ + N Y GS
Sbjct: 307 ILLEVQLDGYWPSGFGMDSTGNELALVPMEPPRSSVSIAGGPTLSNGYSKVHTSNLYQGS 366
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
GSTF DM+DGYD + KG++GGLAGLQNLGNTCFMNSA+QCLVHTP + +YFL DY
Sbjct: 367 PLGSTFTDMEDGYDVLRSVAKGDRGGLAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQDY 426
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
++EIN +NPLGM+GELA AFG+LLRKLWSSGR VAPRAFKGKLARFAPQFSGYNQHDSQ
Sbjct: 427 TEEINKQNPLGMNGELAFAFGELLRKLWSSGRTPVAPRAFKGKLARFAPQFSGYNQHDSQ 486
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIE KDS GRPDEEVA+ECW+NHKARNDSLIVDV QGQY
Sbjct: 487 ELLAFLLDGLHEDLNRVKQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVDVCQGQY 546
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVCSK+SITFDPFMYL+LPLPSTVTR MTVTVFY +GSGLPMP+TVT++KHG C
Sbjct: 547 KSTLVCPVCSKISITFDPFMYLSLPLPSTVTRIMTVTVFYGDGSGLPMPYTVTVLKHGYC 606
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
KDL AL+ ACCLK DE LLLAEVY H+I+R+ ENP+EL+++IKD+EHIVAYR +K+ G
Sbjct: 607 KDLSQALAAACCLKSDENLLLAEVYEHRIYRYIENPSELLTNIKDEEHIVAYRLPKKRAG 666
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR-T 651
+LEI++R Q++ D LKG ERKL GAPLVTYL E+ +GADIDIAVS+LLSPLRR T
Sbjct: 667 LTRLEIIHRCQQQCTPDSLKGGERKLLGAPLVTYLGEDAQTGADIDIAVSRLLSPLRRKT 726
Query: 652 Y-SSAKAHGGKENGFLPEVIDELSN-------SHNESVETAELEDLCSRELSFQLSLTDE 703
Y SS+ H GKENG + E D +N S N+S + ELE++ ELSFQLS+TDE
Sbjct: 727 YPSSSNVHSGKENGSVSEATDNPTNSCNTQSGSGNQSTDGTELEEMSRWELSFQLSITDE 786
Query: 704 RISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAI 763
R SCKPI+KDS+++PG+ I+V+LDWTD HELYD SY++DLP VHK GFT KKTR EAI
Sbjct: 787 RGLSCKPIEKDSLIRPGQFIRVMLDWTDKEHELYDASYLRDLPEVHKNGFTAKKTRPEAI 846
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+LFSCL+AFL EEPLGP DMWYCP CKEHRQATKKLDLW LPD+LVFHLKRFSYSRYLKN
Sbjct: 847 TLFSCLEAFLKEEPLGPQDMWYCPNCKEHRQATKKLDLWRLPDILVFHLKRFSYSRYLKN 906
Query: 824 KLDTFVNFPILNLDLSKYMKSKDG--ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
KLDT VNFPI +LDLS+Y+K KD +S+VY+L+AISNHYGGLGGGHY+AYAK+
Sbjct: 907 KLDTLVNFPIHSLDLSQYVKCKDASSQSHVYELYAISNHYGGLGGGHYSAYAKL 960
>gi|297742456|emb|CBI34605.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/895 (70%), Positives = 738/895 (82%), Gaps = 24/895 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYR-SWER 59
MTI DS MMENGGSCLP TP++E+QIV DL N+S+ LKEGNL+F + SW+R
Sbjct: 1 MTIADSG-FMMENGGSCLPYTPEQEKQIVDDLMNKSESSLKEGNLFFFFHLFRWFTSWQR 59
Query: 60 YVC---GDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNL 116
Y+ G+ P ++S DS ++ V SK AERPGPIDNSDI+ NGN E DDLE+ R L
Sbjct: 60 YIGQGNGEYPINGHLS-DSQRLDAVPSKTAERPGPIDNSDIVLNGN-ECELDDLEILRTL 117
Query: 117 EEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQ 175
EEG+DYVLVPQ+VWEKLF WYKGGPALPRKMIS+GI ++K VE++ LCLKL DSRDNSQ
Sbjct: 118 EEGRDYVLVPQEVWEKLFDWYKGGPALPRKMISQGITHKKFMVEIYRLCLKLTDSRDNSQ 177
Query: 176 TVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQ 235
+VIRLSKKAS +LYE+VC L+ +EQEKARIWDYFNK R + L S+QTL+++ LQMDQ
Sbjct: 178 SVIRLSKKASVHELYERVCTLKVVEQEKARIWDYFNK-RKQAILVASNQTLEESNLQMDQ 236
Query: 236 DILLEVQVD----NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPG 291
DILLEVQ+D +G MDSTGN+LALVP+EP RSS++IAGGP LSNG++ + N Y G
Sbjct: 237 DILLEVQLDGYWPSGFGMDSTGNELALVPMEPPRSSVSIAGGPTLSNGYSKVHTSNLYQG 296
Query: 292 SSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
S GSTF DM+DGYD + KG++GGLAGLQNLGNTCFMNSA+QCLVHTP + +YFL D
Sbjct: 297 SPLGSTFTDMEDGYDVLRSVAKGDRGGLAGLQNLGNTCFMNSAIQCLVHTPPIFEYFLQD 356
Query: 352 YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDS 411
Y++EIN +NPLGM+GELA AFG+LLRKLWSSGR VAPRAFKGKLARFAPQFSGYNQHDS
Sbjct: 357 YTEEINKQNPLGMNGELAFAFGELLRKLWSSGRTPVAPRAFKGKLARFAPQFSGYNQHDS 416
Query: 412 QELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQ 471
QELLAFLLDGLHEDLNRVKQKPYIE KDS GRPDEEVA+ECW+NHKARNDSLIVDV QGQ
Sbjct: 417 QELLAFLLDGLHEDLNRVKQKPYIETKDSNGRPDEEVADECWRNHKARNDSLIVDVCQGQ 476
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
YKSTLVCPVCSK+SITFDPFMYL+LPLPSTVTR MTVTVFY +GSGLPMP+TVT++KHG
Sbjct: 477 YKSTLVCPVCSKISITFDPFMYLSLPLPSTVTRIMTVTVFYGDGSGLPMPYTVTVLKHGY 536
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG 591
CKDL AL+ ACCLK DE LLLAEVY H+I+R+ ENP+EL+++IKD+EHIVAYR +K+
Sbjct: 537 CKDLSQALAAACCLKSDENLLLAEVYEHRIYRYIENPSELLTNIKDEEHIVAYRLPKKRA 596
Query: 592 GKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR- 650
G +LEI++R Q++ D LKG ERKL GAPLVTYL E+ +GADIDIAVS+LLSPLRR
Sbjct: 597 GLTRLEIIHRCQQQCTPDSLKGGERKLLGAPLVTYLGEDAQTGADIDIAVSRLLSPLRRK 656
Query: 651 TY-SSAKAHGGKENGFLPEVIDELSN-------SHNESVETAELEDLCSRELSFQLSLTD 702
TY SS+ H GKENG + E D +N S N+S + ELE++ ELSFQLS+TD
Sbjct: 657 TYPSSSNVHSGKENGSVSEATDNPTNSCNTQSGSGNQSTDGTELEEMSRWELSFQLSITD 716
Query: 703 ERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA 762
ER SCKPI+KDS+++PG+ I+V+LDWTD HELYD SY++DLP VHK GFT KKTR EA
Sbjct: 717 ERGLSCKPIEKDSLIRPGQFIRVMLDWTDKEHELYDASYLRDLPEVHKNGFTAKKTRPEA 776
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+LFSCL+AFL EEPLGP DMWYCP CKEHRQATKKLDLW LPD+LVFHLKRFSYSRYLK
Sbjct: 777 ITLFSCLEAFLKEEPLGPQDMWYCPNCKEHRQATKKLDLWRLPDILVFHLKRFSYSRYLK 836
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDG--ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
NKLDT VNFPI +LDLS+Y+K KD +S+VY+L+AISNHYGGLGGGHY+AYAK+
Sbjct: 837 NKLDTLVNFPIHSLDLSQYVKCKDASSQSHVYELYAISNHYGGLGGGHYSAYAKL 891
>gi|255555787|ref|XP_002518929.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223541916|gb|EEF43462.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 938
Score = 1202 bits (3110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/894 (67%), Positives = 722/894 (80%), Gaps = 24/894 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MT+ DS LM SCLPCTP EE+QIV++L N+++LDLKEGNLY+++S RW+ W+RY
Sbjct: 1 MTMADSECLMENGESSCLPCTPHEEQQIVKELMNEAELDLKEGNLYYVVSARWFAGWQRY 60
Query: 61 VCGDEPS--IDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V S +D DS H++ V A+RPGPIDNSD++QNG+ + E DDLE+ R L E
Sbjct: 61 VGQGNNSHLVDGQPSDSQHLHVVPLTVADRPGPIDNSDLVQNGS-NIEADDLELSRTLLE 119
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLCLKLIDSRDNSQT 176
G+DYVLVPQ+VW+KL WYKGGP LPRKMIS+G+ N+K+ VEV+ LCLKL+DSRD+S+
Sbjct: 120 GRDYVLVPQKVWDKLVQWYKGGPTLPRKMISQGVSNKKQFNVEVYPLCLKLVDSRDDSEF 179
Query: 177 VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
IRLSKKAS QL+E+VC L+G +QEK IWDY+NK+R S L +++TL+++ LQMDQ+
Sbjct: 180 TIRLSKKASLHQLFERVCALKGTKQEKIIIWDYYNKRRH-SQLIAANRTLEESNLQMDQE 238
Query: 237 ILLEVQVDNGI----SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEVQ D DSTGN+LALV +EP+R+SL+IAGGP LSNGH++ Y N PG
Sbjct: 239 ILLEVQGDGPYLSQSGKDSTGNELALVALEPARTSLSIAGGPTLSNGHSSTYGLNLRPGG 298
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
+ + F D DD +Y ++ E+GGLAGLQN+GNTCFMNSALQCLVHTP L YFL DY
Sbjct: 299 ALSTGFTDNDDASGAYTAVRRSERGGLAGLQNMGNTCFMNSALQCLVHTPPLVDYFLKDY 358
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
SDEIN ENPLGMHGELALAFGDLLRKLWSSGR APR FKGKLA FAPQFSGYNQHDSQ
Sbjct: 359 SDEINAENPLGMHGELALAFGDLLRKLWSSGRTTFAPRVFKGKLALFAPQFSGYNQHDSQ 418
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIEMKD GGRPDEEVA+ECW+NHKARNDS+IVDV QGQY
Sbjct: 419 ELLAFLLDGLHEDLNRVKQKPYIEMKDWGGRPDEEVADECWRNHKARNDSVIVDVCQGQY 478
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVCSK+SITFDPFMYL+LPLPSTVTR+MT+TVFY +GS LPMP+TV+++K+G C
Sbjct: 479 KSTLVCPVCSKISITFDPFMYLSLPLPSTVTRSMTITVFYGDGSALPMPYTVSVLKNGHC 538
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
+DL AL+ ACCL +E LLLAEVY+H+I+R FENP E + SIKD+E+IVAYR ++ G
Sbjct: 539 RDLTQALAAACCLGSEESLLLAEVYDHRIYRLFENPYESLVSIKDEEYIVAYRLSQRDTG 598
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K KLEI+N QEKSA D L+GS K FGAPL+T L+++ SGADI++AVS+LLSPLRRT
Sbjct: 599 KKKLEIIN--QEKSALD-LRGSGWKDFGAPLLTCLQDDSPSGADIELAVSRLLSPLRRTC 655
Query: 653 SSAKA--HGGKENGFLPEVIDELSNSHNES-------VETAELEDLCSRELSFQLSLTDE 703
SS+ A H GKENGFL E D SNS N S +E E ED ++ELSF+L LTD+
Sbjct: 656 SSSVAHIHSGKENGFLLEANDRPSNSCNGSPEQEDQPMENVEPEDTSNQELSFRLFLTDD 715
Query: 704 RISSCKPIQKDSILKP-GKHIKVLLDWTDDVHELYDPSYIKDLPVV-HKTGFTVKKTRQE 761
R S+ KPI +DS++K G +KV L+WT+ H+ YDP Y+KDLPVV HKTGFT KKTRQE
Sbjct: 716 RCSTHKPILRDSVIKSGGSRMKVFLEWTEMEHKTYDPCYLKDLPVVYHKTGFTAKKTRQE 775
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
A+SLFSCL+AFLTEEPLGPDDMWYCP CKEHRQATKKLDLW LP++LVFHLKRFSYSRYL
Sbjct: 776 AVSLFSCLEAFLTEEPLGPDDMWYCPGCKEHRQATKKLDLWTLPEILVFHLKRFSYSRYL 835
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
KNKLDTFV+FPI NLDLSK++K KD SYVY+L+AISNHYGGLGGGHYTA+AK+
Sbjct: 836 KNKLDTFVDFPIHNLDLSKFVKRKDDRSYVYELYAISNHYGGLGGGHYTAFAKL 889
>gi|356576624|ref|XP_003556430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 933
Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/890 (67%), Positives = 711/890 (79%), Gaps = 23/890 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI DS V M+N SC+ P+EE +IV +L +S+L+LKEGNLY++IS RW+ W+ Y
Sbjct: 1 MTIADS-VFPMDNVASCILLPPEEENRIVSELIKESELNLKEGNLYYVISNRWFSRWQSY 59
Query: 61 V--CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V C S+D S D + N K A+RPGPIDNSDII GN S + ++L++ R LEE
Sbjct: 60 VGPCVGMLSVDKQSSDGHNANMTHPKIADRPGPIDNSDIISKGN-SCDNNNLDIHRMLEE 118
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTV 177
G DYVLVP++VWE+L WYKGGPALPRK+IS+G +++ VEV+ L LK+ D+RD Q++
Sbjct: 119 GTDYVLVPEKVWERLLEWYKGGPALPRKLISQGHEHKQYNVEVYPLSLKVTDARDKRQSI 178
Query: 178 IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSD-QTLDDAMLQMDQD 236
++LS+KA+ +L+E VCK++G+EQ KA IWDYFN + S L VSD +TL+DA L MDQD
Sbjct: 179 VKLSRKATIGELHELVCKIKGVEQNKACIWDYFNLNKQ-SLLTVSDPKTLEDANLIMDQD 237
Query: 237 ILLEVQVDNGIS----MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEV +D S MDS GN+LALVP+EPSRSS++IAGGP +SNGH+TG F+ Y GS
Sbjct: 238 ILLEVSLDRDGSSHSGMDSMGNELALVPLEPSRSSMSIAGGPTMSNGHSTGSSFSLYQGS 297
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
S S+ +MDD YD Y KGE+GGLAGLQNLGNTCFMNS++QCLVHTP L++YFL DY
Sbjct: 298 SVSSSLTNMDDRYDVY----KGERGGLAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDY 353
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
SDEIN +NPLGM GELALAFGDLLRKLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQ
Sbjct: 354 SDEINMDNPLGMCGELALAFGDLLRKLWSSGRTAIAPRAFKSKLARFAPQFSGYNQHDSQ 413
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIEMKDS GRPDEEVA+ECWKNH ARNDSLIVDV QGQY
Sbjct: 414 ELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQY 473
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVC K+SITFDPFMYL+LPLPSTVTRTMT+TVFY +GSGLPMP+TVT++KHG C
Sbjct: 474 KSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTITVFYCDGSGLPMPYTVTVLKHGSC 533
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
+DL AL ACCLK DE LLLAEVY H+I+R+ ENP E ++SIKDDEHIVAYR +
Sbjct: 534 RDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLENPMEPLNSIKDDEHIVAYRV-KSGAR 592
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K K+EI++RW + + D +K +RKLFG PLVTYL E+ GA+I+ +V K+L PLR+ Y
Sbjct: 593 KTKVEIMHRWLAQCSLDSMKAGDRKLFGTPLVTYLVEDPQFGANIEASVHKMLEPLRKAY 652
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAEL-------EDLCSRELSFQLSLTDERI 705
SS+K+H GKENGF+ DE SN N E+ L E E SFQL LT+E
Sbjct: 653 SSSKSHDGKENGFISAGSDEQSNISNTQSESQSLTTGNKEQEGTSCGESSFQLVLTNECC 712
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
SC+PI+K S +KP + ++V LDWTD HELYD SY++DLP VHKTGFTVKKTRQEAISL
Sbjct: 713 LSCEPIEKASFIKPNQVVRVFLDWTDKEHELYDASYLRDLPEVHKTGFTVKKTRQEAISL 772
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
FSCL+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP++LVFHLKRFSYSRYLKNKL
Sbjct: 773 FSCLEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKL 832
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
DTFVNFPI NLDL+KY+KSKDG SYVYDL+AISNHYGGLGGGHYTAY K+
Sbjct: 833 DTFVNFPIHNLDLTKYVKSKDGPSYVYDLYAISNHYGGLGGGHYTAYCKL 882
>gi|224117792|ref|XP_002317669.1| predicted protein [Populus trichocarpa]
gi|222860734|gb|EEE98281.1| predicted protein [Populus trichocarpa]
Length = 942
Score = 1195 bits (3092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/902 (66%), Positives = 725/902 (80%), Gaps = 40/902 (4%)
Query: 1 MTIRDSSVLMMENGG----------SCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLIS 50
MT+ DS LM ENGG SCLPCTP+EE+QIV++L +++ DLKEGNLYF++S
Sbjct: 1 MTMIDSRCLM-ENGGGGGGGGGGEGSCLPCTPEEEKQIVEELNREAERDLKEGNLYFVVS 59
Query: 51 TRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSK----RAERPGPIDNSDIIQNGNGSSE 106
+RW+ WE YV +DN+ NG SS+ ERPGPIDNSDII+ G S+E
Sbjct: 60 SRWFSKWESYV--GRGGVDNLD------NGKSSEPQDLDVERPGPIDNSDIIE-GRSSNE 110
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLC 164
GD+LE+ R L EG+DYVLVP++VWEKL WYKGGP LPRKMIS+G+ N+K+ VEV+ LC
Sbjct: 111 GDELELVRTLLEGRDYVLVPKKVWEKLVQWYKGGPVLPRKMISQGVFNKKQFNVEVYPLC 170
Query: 165 LKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQ 224
LKLIDSRD+S++ I++SKKAS +LYEKVC RG+E+EKA IWD+FNKQ+S S L +S+Q
Sbjct: 171 LKLIDSRDDSESTIQISKKASLHELYEKVCSARGVEREKASIWDFFNKQKS-SQLSISNQ 229
Query: 225 TLDDAMLQMDQDILLEVQVDNGISM---DSTGNDLALVPIEPSRSSLTIAGGPALSNGHT 281
TL++ LQMDQ+ILLE++VD+ S DSTGN+LALV +EP RS ++IAGGPA+SNGH+
Sbjct: 230 TLEELHLQMDQEILLELKVDSSPSQSGKDSTGNELALVALEPPRSPMSIAGGPAMSNGHS 289
Query: 282 TGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHT 341
+ Y N +PGS+ S+F DMDDG+ +++ ++ EKGGLAGLQN+GNTCFMNSALQCL+HT
Sbjct: 290 SSYSLNLWPGSAVNSSFKDMDDGFGVHSSVRRVEKGGLAGLQNMGNTCFMNSALQCLLHT 349
Query: 342 PDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAP 401
P L +YFL DYS+EINT+NPLGMHGELALAFGDLLRKLWSSGR A+APR FKGKLA FAP
Sbjct: 350 PQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLLRKLWSSGRTAIAPRVFKGKLALFAP 409
Query: 402 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARND 461
QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD G PDEEVA+ECW+NHK RND
Sbjct: 410 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDWSGEPDEEVADECWRNHKTRND 469
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S+IVDV QGQYKSTLVCP+CSK+SITFDPFMYL+LPLPSTVTR MTVTVF+ +GSGLPMP
Sbjct: 470 SVIVDVCQGQYKSTLVCPICSKISITFDPFMYLSLPLPSTVTRIMTVTVFHGDGSGLPMP 529
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
TV+++KHG C+DL AL +AC LK E LLLAEVY+H+I+R ENP E + SIKD++HI
Sbjct: 530 CTVSVLKHGNCRDLGQALDSACGLKSGESLLLAEVYDHKIYRMLENPFEPLVSIKDEDHI 589
Query: 582 VAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAV 641
VAYRF K G+ KLEIV+R +K D LKG+ K FG PL+TY++++ SGADI +A
Sbjct: 590 VAYRFCGKGAGRKKLEIVHR--DKCTPDILKGNVGKYFGTPLITYMDDDSPSGADIYLAA 647
Query: 642 SKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHN-------ESVETAELEDLCSREL 694
S+LLSPL+R +S AH G+ENGFL E E S+ N +S+ ELE S+EL
Sbjct: 648 SRLLSPLKRACASTMAHSGEENGFLLEANGETSSGCNGQCEPRDQSMGNTELEGTSSQEL 707
Query: 695 SFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLP-VVHKTGF 753
FQL LTD+R SCKPI KDS++K G IKV+ +WT+ +LYD S +KDLP V HKTG+
Sbjct: 708 PFQLFLTDDRYLSCKPIFKDSVIKSGNRIKVVFEWTEKEQKLYDSSNLKDLPEVYHKTGY 767
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
KKTRQEA+SLFSCL+AFLTEEPLGPDDMWYCP CKEHRQATKKLDLWMLPD+LVFHLK
Sbjct: 768 RAKKTRQEAVSLFSCLEAFLTEEPLGPDDMWYCPSCKEHRQATKKLDLWMLPDILVFHLK 827
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
RFSYSRYLKNKLDTFV+FP+ NLDLSKY+K KDG+SY Y+L+AISNHYGGLGGGHYTA+A
Sbjct: 828 RFSYSRYLKNKLDTFVDFPVHNLDLSKYVKQKDGQSYTYELYAISNHYGGLGGGHYTAFA 887
Query: 874 KV 875
K+
Sbjct: 888 KL 889
>gi|356576622|ref|XP_003556429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 928
Score = 1191 bits (3080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/890 (67%), Positives = 709/890 (79%), Gaps = 28/890 (3%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI DS V M+N SC+ P+EE +IV +L +S+L+LKEGNLY++IS RW+ W+ Y
Sbjct: 1 MTIADS-VFPMDNVASCILLPPEEENRIVSELIKESELNLKEGNLYYVISNRWFSRWQSY 59
Query: 61 V--CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V C S+D S D + N K A+RPGPIDNSDII GN S + ++L++ R LEE
Sbjct: 60 VGPCVGMLSVDKQSSDGHNANMTHPKIADRPGPIDNSDIISKGN-SCDNNNLDIHRMLEE 118
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTV 177
G DYVLVP++VWE+L WYKGGPALPRK+IS+G +++ VEV+ L LK+ D+RD Q++
Sbjct: 119 GTDYVLVPEKVWERLLEWYKGGPALPRKLISQGHEHKQYNVEVYPLSLKVTDARDKRQSI 178
Query: 178 IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSD-QTLDDAMLQMDQD 236
++LS+KA+ +L+E VCK++G+EQ KA IWDYFN + S L VSD +TL+DA L MDQD
Sbjct: 179 VKLSRKATIGELHELVCKIKGVEQNKACIWDYFNLNKQ-SLLTVSDPKTLEDANLIMDQD 237
Query: 237 ILLEVQVDNGIS----MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEV +D S MDS GN+LALVP+EPSRSS++IAGGP +SNGH+TG F+ Y GS
Sbjct: 238 ILLEVSLDRDGSSHSGMDSMGNELALVPLEPSRSSMSIAGGPTMSNGHSTGSSFSLYQGS 297
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
S S+ +MDD YD Y KGE+GGLAGLQNLGNTCFMNS++QCLVHTP L++YFL DY
Sbjct: 298 SVSSSLTNMDDRYDVY----KGERGGLAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDY 353
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
SDEIN +NPLGM GELALAFGDLLRKLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQ
Sbjct: 354 SDEINMDNPLGMCGELALAFGDLLRKLWSSGRTAIAPRAFKSKLARFAPQFSGYNQHDSQ 413
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIEMKDS GRPDEEVA+ECWKNH ARNDSLIVDV QGQY
Sbjct: 414 ELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQY 473
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVC K+SITFDPFMYL+LPLPSTVTRTMT+TVFY +GSGLPMP+TVT++KHG C
Sbjct: 474 KSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTITVFYCDGSGLPMPYTVTVLKHGSC 533
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
+DL AL ACCLK DE LLLAEVY H+I+R+ ENP E ++SIKDDEHIVAYR +
Sbjct: 534 RDLCQALGIACCLKSDEMLLLAEVYEHKIYRYLENPMEPLNSIKDDEHIVAYRV-KSGAR 592
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K K+EI++RW D +K +RKLFG PLVTYL E+ GA+I+ +V K+L PLR+ Y
Sbjct: 593 KTKVEIMHRWL-----DNMKAGDRKLFGTPLVTYLVEDPQFGANIEASVHKMLEPLRKAY 647
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAEL-------EDLCSRELSFQLSLTDERI 705
SS+K+H GKENGF+ DE SN N E+ L E E SFQL LT+E
Sbjct: 648 SSSKSHDGKENGFISAGSDEQSNISNTQSESQSLTTGNKEQEGTSCGESSFQLVLTNECC 707
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
SC+PI+K S +KP + ++V LDWTD HELYD SY++DLP VHKTGFTVKKTRQEAISL
Sbjct: 708 LSCEPIEKASFIKPNQVVRVFLDWTDKEHELYDASYLRDLPEVHKTGFTVKKTRQEAISL 767
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
FSCL+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP++LVFHLKRFSYSRYLKNKL
Sbjct: 768 FSCLEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKL 827
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
DTFVNFPI NLDL+KY+KSKDG SYVYDL+AISNHYGGLGGGHYTAY K+
Sbjct: 828 DTFVNFPIHNLDLTKYVKSKDGPSYVYDLYAISNHYGGLGGGHYTAYCKL 877
>gi|224056675|ref|XP_002298967.1| predicted protein [Populus trichocarpa]
gi|222846225|gb|EEE83772.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 1189 bits (3075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/899 (66%), Positives = 723/899 (80%), Gaps = 43/899 (4%)
Query: 1 MTIRDSSVLMMENGG------SCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWY 54
MT+ DSS LM ENGG SCL CTP+EE+QIV++L +++ DLKEGNLYF++S+RW+
Sbjct: 1 MTMIDSSCLM-ENGGGGGGGGSCLTCTPEEEKQIVEELSREAERDLKEGNLYFVVSSRWF 59
Query: 55 RSWERYVCGDEPSIDNI----SFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDL 110
WERYV + +DN+ S +S ++ AERPGPIDNSDII+ G+G+ EGD+L
Sbjct: 60 SKWERYV--GQGFVDNLDNGKSLESQDLD------AERPGPIDNSDIIEGGSGN-EGDEL 110
Query: 111 EVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLCLKLI 168
E+ R L EG+DYVLVP++VWEKL WYKGGP LPRKMIS+G+ N K+ VEV+ LCLKLI
Sbjct: 111 ELVRALLEGKDYVLVPKKVWEKLVQWYKGGPTLPRKMISQGVFNRKQFNVEVYPLCLKLI 170
Query: 169 DSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDD 228
D RD+S++ IR+SKKAS ++LYE+VC +R +E+EKA IWDYFNKQ+ S L S+QTL++
Sbjct: 171 DPRDDSESTIRISKKASLQELYERVCSVRRVEREKASIWDYFNKQK-ISQLSDSNQTLEE 229
Query: 229 AMLQMDQDILLEVQVDNGISM---DSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYR 285
LQMDQ+ILLE++ D+ S DSTGN+LA+V +EP RS ++IAGGP +SNGH++ Y
Sbjct: 230 LNLQMDQEILLELKEDSSPSQSGKDSTGNELAVVTLEPPRSPVSIAGGPVMSNGHSSSYS 289
Query: 286 FNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLA 345
N PGS+ S+F DMD+G+ + ++ ++ EKGGLAGLQN+GNTCFMNSALQCLVHTP L
Sbjct: 290 LNLQPGSALNSSFTDMDNGFGA-SSVRRVEKGGLAGLQNMGNTCFMNSALQCLVHTPQLV 348
Query: 346 QYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSG 405
+YFL DYS+EINT+NPLGMHGELALAFGDLLRKLWSSGR AVAPR FKGKLA FAPQFSG
Sbjct: 349 EYFLQDYSEEINTQNPLGMHGELALAFGDLLRKLWSSGRTAVAPRVFKGKLALFAPQFSG 408
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD G PDEE+A+ECW+NHKARNDS+IV
Sbjct: 409 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDWSGEPDEEIADECWRNHKARNDSVIV 468
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
DV QGQYKSTLVCP+CSK+S+TFDPFMYL+LPLPSTVTR+MTVTVFY +GSGLPMP+T++
Sbjct: 469 DVCQGQYKSTLVCPICSKISVTFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTIS 528
Query: 526 LMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR 585
++KHG C+DL AL TACCLK E LLLAEV++H+I+R ENP E + SIKD++ IVAYR
Sbjct: 529 VLKHGNCRDLSQALGTACCLKGGESLLLAEVFDHKIYRLLENPFEPLVSIKDEDRIVAYR 588
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
F K G+ KLEI++R D G+ K FG PL+TY++++ +GADI +A KLL
Sbjct: 589 FSGKGTGRRKLEIIHR-------DNFMGNVGKSFGTPLITYMDDDSPTGADIYLAACKLL 641
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHN--------ESVETAELEDLCSRELSFQ 697
SPL+R S AH GKENG L E E S+S N +S+ ELED S+ELSFQ
Sbjct: 642 SPLKRACSPTMAHSGKENGLLSEANAETSSSCNGQCEPPRDQSMGDTELEDTSSQELSFQ 701
Query: 698 LSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLP-VVHKTGFTVK 756
L LTD+R SSCKPI KDS++ G IKV+++WT+ +LYD SY+KDLP V HKTG+T K
Sbjct: 702 LFLTDDRYSSCKPIFKDSVINSGNQIKVVVEWTEKEQKLYDSSYLKDLPEVYHKTGYTTK 761
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
KTRQEA+SLFSCL+AFLTEEPLGPDDMWYCP CKEHRQATKKLDLWMLPD+LVFHLKRFS
Sbjct: 762 KTRQEAVSLFSCLEAFLTEEPLGPDDMWYCPSCKEHRQATKKLDLWMLPDILVFHLKRFS 821
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
YSRYLKNKLDTFV+FPI NLDLSKY+K DG S+ Y+LFAISNHYGGLGGGHYTA+AK+
Sbjct: 822 YSRYLKNKLDTFVDFPIHNLDLSKYVKKNDGHSFTYELFAISNHYGGLGGGHYTAFAKL 880
>gi|449456269|ref|XP_004145872.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Cucumis
sativus]
Length = 915
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/886 (67%), Positives = 717/886 (80%), Gaps = 19/886 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MT+ S +M G SCLP PD E +IV +L NQS+ +LKEGNLY++IS RW+R W+ Y
Sbjct: 1 MTVPASGFIMENGGSSCLPPPPDVENRIVSELVNQSESNLKEGNLYYVISNRWFRRWQLY 60
Query: 61 VC--GDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V +E S ++ S DS H N V S ERPGPIDNSDII +G+ SSE DDLE++ LEE
Sbjct: 61 VGLPTEEFSSEDHSSDSQHCNMVPSNVVERPGPIDNSDIIISGSDSSENDDLELKSFLEE 120
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLCLKLIDSRDNSQT 176
+DYVLVP +VWEKL+ WYKGGP LPRKMIS+G VN++ VEV+ LCLKLID+RD S+
Sbjct: 121 RRDYVLVPTEVWEKLYDWYKGGPPLPRKMISQG-VNQRNFSVEVYLLCLKLIDARDGSEC 179
Query: 177 VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
IRLSKKA+ L+EKV L+GI+QEKA I+DYFN+Q+ S LD + QTL++ LQM+Q
Sbjct: 180 TIRLSKKATIIDLHEKVFALKGIKQEKACIFDYFNQQKQ-SILDGTSQTLEELNLQMNQH 238
Query: 237 ILLEVQVDN-GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFG 295
ILLEV MD+T N+LALV +EPSRS L+IAGGP +SNGH++GY Y GSSF
Sbjct: 239 ILLEVDGPTPQTGMDATRNELALVALEPSRSPLSIAGGPVMSNGHSSGY---GYQGSSFS 295
Query: 296 STFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDE 355
++ DMDD D NTAK+ EKGGLAGLQNLGNTCFMNSALQCLVHTP L +YFL DYS+E
Sbjct: 296 TSVSDMDDRNDLSNTAKRKEKGGLAGLQNLGNTCFMNSALQCLVHTPPLVEYFLQDYSEE 355
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
IN ENPLGMHGELA+ FG+LLRKLWS G+ +APR FKGKLARFAPQFSGYNQHDSQELL
Sbjct: 356 INAENPLGMHGELAIVFGELLRKLWS-GQTTIAPRVFKGKLARFAPQFSGYNQHDSQELL 414
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRVK+KPY E KDS GRPD EVA+ECW+ HKARNDSLIVDV QGQYKST
Sbjct: 415 AFLLDGLHEDLNRVKRKPYFETKDSDGRPDVEVADECWRYHKARNDSLIVDVCQGQYKST 474
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
LVCPVC K+SITFDPFMYL+LPLPSTVTR++TVTVFY +GSGLPMP+TVT+ +HGC KDL
Sbjct: 475 LVCPVCEKISITFDPFMYLSLPLPSTVTRSVTVTVFYGDGSGLPMPYTVTVQRHGCTKDL 534
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIK 595
AL+TACCL+ DE LL+AEVY+H+I+R+ +NP E ++S+KD+E++VAYR +++ G+ K
Sbjct: 535 THALATACCLRSDENLLIAEVYDHRIYRYLDNPLESLTSVKDEEYLVAYRLPQRESGRPK 594
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA 655
LEI++R EK + +KG ERKLFG PLVTYL E+ SGADI+ AVSK+L PLRRTYSS
Sbjct: 595 LEIIHRSLEKCPMERVKGMERKLFGTPLVTYLGEDFHSGADINAAVSKILLPLRRTYSST 654
Query: 656 KAHGGKENGFLPEVIDELSN------SHNESVETAELEDLCSRELSFQLSLTDERISSCK 709
K++G KENGF+ E+ DE +N S +++V+ E+E+ E FQL LTD+R SCK
Sbjct: 655 KSNGSKENGFVSEMNDEPANCSPQSESRSQAVDI-EVEEASENEPCFQLFLTDDRSLSCK 713
Query: 710 PIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
PI+KDS +K G +KV LDWT+ HE+YD SYIKDLP VH+T F +KKTRQEAISLFSCL
Sbjct: 714 PIEKDSAIKYGPLVKVFLDWTEKEHEVYDVSYIKDLPPVHQTRF-MKKTRQEAISLFSCL 772
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP+++VFHLKRFSYSRYLKNKLDTFV
Sbjct: 773 EAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEIIVFHLKRFSYSRYLKNKLDTFV 832
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+FPI NLDLSKY+KS DG+SY+Y+L+AISNHYGGLGGGHYTAYAK+
Sbjct: 833 DFPIHNLDLSKYVKSNDGKSYLYNLYAISNHYGGLGGGHYTAYAKL 878
>gi|449507201|ref|XP_004162960.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 9-like [Cucumis sativus]
Length = 915
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/886 (67%), Positives = 717/886 (80%), Gaps = 19/886 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MT+ S +M G SCLP PD E +IV +L NQS+ +LKEGNLY++IS RW+R W+ Y
Sbjct: 1 MTVPASGFIMENGGSSCLPPPPDVENRIVSELVNQSESNLKEGNLYYVISNRWFRRWQLY 60
Query: 61 VC--GDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V +E S ++ S DS H N V S ERPGPIDNSDII +G+ SSE DDLE++ LEE
Sbjct: 61 VGLPTEEFSSEDHSSDSQHCNMVPSNVVERPGPIDNSDIIISGSDSSENDDLELKSFLEE 120
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLCLKLIDSRDNSQT 176
+DYVLVP +VWEKL+ WYKGGP LPRKMIS+G VN++ VEV+ LCLKLID+RD S+
Sbjct: 121 RRDYVLVPTEVWEKLYDWYKGGPPLPRKMISQG-VNQRNFSVEVYLLCLKLIDARDGSEC 179
Query: 177 VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
IRLSKKA+ L+EKV L+GI+QEKA I+DYFN+Q+ S LD + QTL++ LQM+Q
Sbjct: 180 TIRLSKKATIIDLHEKVFALKGIKQEKACIFDYFNQQKQ-SILDGTSQTLEELNLQMNQH 238
Query: 237 ILLEVQVDN-GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFG 295
ILLEV MD+T N+LALV +EPSRS L+IAGGP +SNGH++GY Y GSSF
Sbjct: 239 ILLEVDGPTPQTGMDATRNELALVALEPSRSPLSIAGGPVMSNGHSSGY---GYQGSSFS 295
Query: 296 STFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDE 355
++ DMDD D NTAK+ EKGGLAGLQNLGNTCFMNSALQCLVHTP L +YFL DYS+E
Sbjct: 296 TSVSDMDDRNDLSNTAKRKEKGGLAGLQNLGNTCFMNSALQCLVHTPPLVEYFLQDYSEE 355
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
IN ENPLGMHGELA+AFG+LLRKLWS G+ +APR FKGKLARFAPQFSGYNQHDSQELL
Sbjct: 356 INAENPLGMHGELAIAFGELLRKLWS-GQTTIAPRVFKGKLARFAPQFSGYNQHDSQELL 414
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRVK+KPY E KDS GRPD EVA+ECW+ HKARNDSLIVDV QGQYKST
Sbjct: 415 AFLLDGLHEDLNRVKRKPYFETKDSDGRPDVEVADECWRYHKARNDSLIVDVCQGQYKST 474
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
LVCPVC K+SITFDPFMYL+LPLPSTVTR++TVTVFY +GSGLPMP+TVT+ +HGC KDL
Sbjct: 475 LVCPVCEKISITFDPFMYLSLPLPSTVTRSVTVTVFYGDGSGLPMPYTVTVQRHGCTKDL 534
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIK 595
AL+TACCL+ DE LL+AEVY+H+I+R+ +NP E ++S+KD+E++VAYR +++ G+ K
Sbjct: 535 THALATACCLRSDENLLIAEVYDHRIYRYLDNPLESLTSVKDEEYLVAYRLPQRESGRPK 594
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA 655
LEI++R EK + +KG ERKLFG PLVTYL E+ SGADI+ AVSK+L PLRRTYSS
Sbjct: 595 LEIIHRSLEKCPMERVKGMERKLFGTPLVTYLGEDFHSGADINAAVSKILLPLRRTYSST 654
Query: 656 KAHGGKENGFLPEVIDELSN------SHNESVETAELEDLCSRELSFQLSLTDERISSCK 709
K++G KENGF+ E+ DE +N S +++V+ E+E+ E FQ LTD+R SCK
Sbjct: 655 KSNGSKENGFVSEMNDEPANCSPQSESRSQAVDI-EVEEASENEPCFQXFLTDDRSLSCK 713
Query: 710 PIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
PI+KDS +K G +KV LDWT+ HE+YD SYIKDLP VH+T F +KKTRQEAISLFSCL
Sbjct: 714 PIEKDSAIKYGPLVKVFLDWTEKEHEVYDVSYIKDLPPVHQTRF-MKKTRQEAISLFSCL 772
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP+++VFHLKRFSYSRYLKNKLDTFV
Sbjct: 773 EAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEIIVFHLKRFSYSRYLKNKLDTFV 832
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+FPI NLDLSKY+KS DG+SY+Y+L+AISNHYGGLGGGHYTAYAK+
Sbjct: 833 DFPIHNLDLSKYVKSNDGKSYLYNLYAISNHYGGLGGGHYTAYAKL 878
>gi|356535266|ref|XP_003536169.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Glycine max]
Length = 931
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/890 (67%), Positives = 716/890 (80%), Gaps = 25/890 (2%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI DS V M+N SC+ P+EE +IV +L +S+L+LKEGNLY++IS RW+ W+ Y
Sbjct: 1 MTIADS-VFPMDNVASCIQLPPEEENRIVSELIKESELNLKEGNLYYVISNRWFSRWQSY 59
Query: 61 V--CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V C SID S D+ + K A+RPGPIDNSDII GN + + ++L++ R LEE
Sbjct: 60 VGPCVGMLSIDKQSSDNHLI--THPKIADRPGPIDNSDIISKGN-NCDSNNLDIHRMLEE 116
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTV 177
G DYVLVP++VWE+L WYKGGPALPRK+IS+G+ + + VEV+ L LK+ D+RDNSQ++
Sbjct: 117 GTDYVLVPEKVWERLLEWYKGGPALPRKLISQGLELKQYNVEVYPLSLKVTDARDNSQSI 176
Query: 178 IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQ-TLDDAMLQMDQD 236
++LS+KA+ +L+E VCK++G+EQ KA IWDYFN ++ S L VS Q TL+DA L MDQD
Sbjct: 177 VKLSRKATIGELHELVCKIKGVEQNKACIWDYFNLKKQ-SLLTVSGQKTLEDANLIMDQD 235
Query: 237 ILLEVQVDNGIS----MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEV +D S MDS GN+LALVP+EP RSS++IAGGP +SNGH+TG F+ Y GS
Sbjct: 236 ILLEVSLDRDHSSHSGMDSMGNELALVPLEPPRSSVSIAGGPTMSNGHSTGSSFSSYQGS 295
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
S S+ +MDD YD Y +GE+GGLAGLQNLGNTCFMNS++QCLVHTP L++YFL DY
Sbjct: 296 SVSSSLTNMDDKYDVY----RGERGGLAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDY 351
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
SDEIN +NPLGM GELALAFGDLLRKLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQ
Sbjct: 352 SDEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKSKLARFAPQFSGYNQHDSQ 411
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIEMKDS GRPDEEVA+ECWKNH ARNDSLIVDV QGQY
Sbjct: 412 ELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQY 471
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVC K+SITFDPFMYL+LPLPSTVTRTMTVTVFY++GSGLPMP+TVT++KHG C
Sbjct: 472 KSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTVFYSDGSGLPMPYTVTVLKHGSC 531
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
+DL AL TACCLK DE LLLAEVY H+I+R+ ENP E ++SIKDDEHIVAYR +
Sbjct: 532 RDLCQALGTACCLKSDEMLLLAEVYEHKIYRYLENPMEPLNSIKDDEHIVAYRI-KSGAR 590
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K K+EI++RW + + D +KG +RKLFG PLVT L E+ GA+I+ +V K+L+PLR+TY
Sbjct: 591 KTKVEIMHRWLARCSLDSMKGGDRKLFGTPLVTCLVEDPQFGANIEASVHKMLAPLRKTY 650
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAEL-------EDLCSRELSFQLSLTDERI 705
SS+K+H GKENGF+ DE SN N E+ L E E S QL LT+E
Sbjct: 651 SSSKSHDGKENGFISGDSDEQSNISNTESESLSLTTGNKEQEGTSCGESSLQLVLTNESC 710
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
SC+PI+K S++KP + ++V LDWTD ELYD SY++DLP VHKTGFTVKKTRQEAISL
Sbjct: 711 LSCEPIEKASLIKPNQVVRVFLDWTDKEQELYDSSYLRDLPEVHKTGFTVKKTRQEAISL 770
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
FSCL+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP++LVFHLKRFSYSRYLKNKL
Sbjct: 771 FSCLEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKL 830
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
DTFVNFPI NLDL+KY+KSKDGESYVY+L+AISNHYGGLGGGHYTAY K+
Sbjct: 831 DTFVNFPIHNLDLTKYVKSKDGESYVYNLYAISNHYGGLGGGHYTAYCKL 880
>gi|356535264|ref|XP_003536168.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Glycine max]
Length = 926
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/890 (67%), Positives = 714/890 (80%), Gaps = 30/890 (3%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI DS V M+N SC+ P+EE +IV +L +S+L+LKEGNLY++IS RW+ W+ Y
Sbjct: 1 MTIADS-VFPMDNVASCIQLPPEEENRIVSELIKESELNLKEGNLYYVISNRWFSRWQSY 59
Query: 61 V--CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
V C SID S D+ + K A+RPGPIDNSDII GN + + ++L++ R LEE
Sbjct: 60 VGPCVGMLSIDKQSSDNHLI--THPKIADRPGPIDNSDIISKGN-NCDSNNLDIHRMLEE 116
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTV 177
G DYVLVP++VWE+L WYKGGPALPRK+IS+G+ + + VEV+ L LK+ D+RDNSQ++
Sbjct: 117 GTDYVLVPEKVWERLLEWYKGGPALPRKLISQGLELKQYNVEVYPLSLKVTDARDNSQSI 176
Query: 178 IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQ-TLDDAMLQMDQD 236
++LS+KA+ +L+E VCK++G+EQ KA IWDYFN ++ S L VS Q TL+DA L MDQD
Sbjct: 177 VKLSRKATIGELHELVCKIKGVEQNKACIWDYFNLKKQ-SLLTVSGQKTLEDANLIMDQD 235
Query: 237 ILLEVQVDNGIS----MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
ILLEV +D S MDS GN+LALVP+EP RSS++IAGGP +SNGH+TG F+ Y GS
Sbjct: 236 ILLEVSLDRDHSSHSGMDSMGNELALVPLEPPRSSVSIAGGPTMSNGHSTGSSFSSYQGS 295
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY 352
S S+ +MDD YD Y +GE+GGLAGLQNLGNTCFMNS++QCLVHTP L++YFL DY
Sbjct: 296 SVSSSLTNMDDKYDVY----RGERGGLAGLQNLGNTCFMNSSIQCLVHTPPLSEYFLQDY 351
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
SDEIN +NPLGM GELALAFGDLLRKLWSSGR A+APRAFK KLARFAPQFSGYNQHDSQ
Sbjct: 352 SDEINMDNPLGMRGELALAFGDLLRKLWSSGRTAIAPRAFKSKLARFAPQFSGYNQHDSQ 411
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVKQKPYIEMKDS GRPDEEVA+ECWKNH ARNDSLIVDV QGQY
Sbjct: 412 ELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVASECWKNHMARNDSLIVDVCQGQY 471
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCPVC K+SITFDPFMYL+LPLPSTVTRTMTVTVFY++GSGLPMP+TVT++KHG C
Sbjct: 472 KSTLVCPVCGKISITFDPFMYLSLPLPSTVTRTMTVTVFYSDGSGLPMPYTVTVLKHGSC 531
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
+DL AL TACCLK DE LLLAEVY H+I+R+ ENP E ++SIKDDEHIVAYR +
Sbjct: 532 RDLCQALGTACCLKSDEMLLLAEVYEHKIYRYLENPMEPLNSIKDDEHIVAYRI-KSGAR 590
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K K+EI++RW D +KG +RKLFG PLVT L E+ GA+I+ +V K+L+PLR+TY
Sbjct: 591 KTKVEIMHRWL-----DNMKGGDRKLFGTPLVTCLVEDPQFGANIEASVHKMLAPLRKTY 645
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAEL-------EDLCSRELSFQLSLTDERI 705
SS+K+H GKENGF+ DE SN N E+ L E E S QL LT+E
Sbjct: 646 SSSKSHDGKENGFISGDSDEQSNISNTESESLSLTTGNKEQEGTSCGESSLQLVLTNESC 705
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
SC+PI+K S++KP + ++V LDWTD ELYD SY++DLP VHKTGFTVKKTRQEAISL
Sbjct: 706 LSCEPIEKASLIKPNQVVRVFLDWTDKEQELYDSSYLRDLPEVHKTGFTVKKTRQEAISL 765
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
FSCL+AFLTEEPLGPDDMWYCP+CKEHRQATKKLDLW LP++LVFHLKRFSYSRYLKNKL
Sbjct: 766 FSCLEAFLTEEPLGPDDMWYCPRCKEHRQATKKLDLWKLPEILVFHLKRFSYSRYLKNKL 825
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
DTFVNFPI NLDL+KY+KSKDGESYVY+L+AISNHYGGLGGGHYTAY K+
Sbjct: 826 DTFVNFPIHNLDLTKYVKSKDGESYVYNLYAISNHYGGLGGGHYTAYCKL 875
>gi|42566404|ref|NP_192795.3| ubiquitin carboxyl-terminal hydrolase 10 [Arabidopsis thaliana]
gi|166201359|sp|Q9ZSB5.2|UBP10_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; Short=AtUBP10; AltName:
Full=Ubiquitin thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|332657500|gb|AEE82900.1| ubiquitin carboxyl-terminal hydrolase 10 [Arabidopsis thaliana]
Length = 923
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/881 (61%), Positives = 678/881 (76%), Gaps = 27/881 (3%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG LP TP+EE++IV +L ++S+ +LK+GNLYF+IS RWY SW+ Y
Sbjct: 1 MTIPNSD-FMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKRWYTSWQEY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S + S G SS+ A RPGPIDN DII++ S+ +D ++RR L EG+
Sbjct: 60 V---ENSANECS------TGESSE-APRPGPIDNHDIIES---DSDINDPQLRRLLVEGE 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVP+QVW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
L K+AS R+LYEKVC + G+ QEKA IWDYF+K+++ +S ++L+++ L MDQDIL+
Sbjct: 167 LGKQASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILV 226
Query: 240 EVQ---VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
EV + +M STGN+LALVP+EPSRS +TIAGGP LSNGH+T F+ +P
Sbjct: 227 EVDGLSSSSQSAMSSTGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFP------ 280
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEI 356
DDG DS + KGEKGGLAGL NLGNTCFMNSALQCL HTP + +YFL DYSD+I
Sbjct: 281 RITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDI 340
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
N +NPLGM GELA+AFGDLL+KLWSSGR AVAPRAFK KLARFAPQFSGYNQHDSQELLA
Sbjct: 341 NRDNPLGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLA 400
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARNDS+IVDV QGQYKSTL
Sbjct: 401 FLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTL 460
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCPVC K+SITFDPFMYL++PLPST+TR+MT+TVFY +GS LPMP+TV + K G +DLI
Sbjct: 461 VCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGSIRDLI 520
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG--KI 594
AL TACCL DE LLLAEVY+H+IFR+FE P + +S+IKDDEHIVAYR ++ G K
Sbjct: 521 TALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQIPKGSRKA 580
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSS 654
KLEI++ QE++ D ++GS+ KLFG P VTY+ E LSG DID +S LSPL + ++
Sbjct: 581 KLEILHGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDAVISGFLSPLHKVHAP 640
Query: 655 AKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD 714
+K H G +NG L + + ++ S +T E+++ RELSF++ LTDER + KP+Q +
Sbjct: 641 SKIHNGSDNGHLADATVDQASGILSSPDT-EIDNASDRELSFRIFLTDERGLNIKPLQSE 699
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
S + PG +VL++W + HE YD SY+ DLP VHKT F+ KKTRQE+ISLFSCL+AFL
Sbjct: 700 SSISPGTVTRVLVEWNEGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLA 759
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
EEPLGPDDMW+CP CKEHRQA KKLDLW LPD+LVFHLKRF+YSRYLKNK+DTFVNFP+
Sbjct: 760 EEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVH 819
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+LDLSKY+K+K+G+SY+Y+L+A+SNHYGGLGGGHYTAYAK+
Sbjct: 820 DLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKL 860
>gi|18413358|ref|NP_567363.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|30681496|ref|NP_849356.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|75249397|sp|Q93Y01.1|UBP9_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 9; AltName:
Full=Deubiquitinating enzyme 9; Short=AtUBP9; AltName:
Full=Ubiquitin thioesterase 9; AltName:
Full=Ubiquitin-specific-processing protease 9
gi|15450767|gb|AAK96655.1| putative protein [Arabidopsis thaliana]
gi|34098847|gb|AAQ56806.1| At4g10590 [Arabidopsis thaliana]
gi|222423042|dbj|BAH19503.1| AT4G10590 [Arabidopsis thaliana]
gi|332657501|gb|AEE82901.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
gi|332657502|gb|AEE82902.1| ubiquitin carboxyl-terminal hydrolase 9 [Arabidopsis thaliana]
Length = 910
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/881 (61%), Positives = 676/881 (76%), Gaps = 28/881 (3%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG P TP+EE++IV +L +S+ +LKEGNLYF+IS RWY SWE+Y
Sbjct: 1 MTIPNSD-FMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKRWYTSWEKY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S +++G SS+ A RPGPIDN DII++ S+ +D ++RR L E
Sbjct: 60 V---EQSTKE------YISGESSE-ASRPGPIDNHDIIES---ESDVNDPQLRRLLMERV 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVPQ+VW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
L K+AS R+LYEKVC L G+ QEKA IWDYF+K+++ +S ++L+++ L MDQDILL
Sbjct: 167 LGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILL 226
Query: 240 EVQ--VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
EV + +M STGN+LALVP+EPSRSS+TIAGGP LSNGH+T F+ +P
Sbjct: 227 EVDGSSSSQSAMSSTGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFP------R 280
Query: 298 FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEIN 357
DDG +S + KGEKGGLAGL NLGNTCFMNSALQCL HTP + +YFL DYSD+IN
Sbjct: 281 ITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDIN 340
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLGM GELA+AFGDLL+KLWSSGR +VAPRAFK KLARFAPQFSGYNQHDSQELLAF
Sbjct: 341 RDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAF 400
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
LLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARNDS+IVDV QGQYKSTLV
Sbjct: 401 LLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLV 460
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C K+SITFDPFMYL++PLPST+TR+MTVTVFY +GS LPMP+TV + K+G +DLI
Sbjct: 461 CPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLIT 520
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIK 595
AL TAC L DE LLLAEVY+H+IF++FENP + +SSIKDDEHIVAYR ++ K GK K
Sbjct: 521 ALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAK 580
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA 655
LEI++ Q++ + ++G + KLFG P VTY+ E LSGADID +S+ LSPL + ++ +
Sbjct: 581 LEILHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPS 640
Query: 656 KAHGGKENGFLPE-VIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD 714
K H G ENG LP+ +DE S S E++D RELSF++ LTDER + KP+Q +
Sbjct: 641 KIHNGSENGHLPDATVDEASEIL--SSPDTEIDDASDRELSFRIFLTDERGLNFKPLQSE 698
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
S + G +VL++W + HE YD SY+ DLP VHKT F+ KKTRQE+ISLFSCL+AFL
Sbjct: 699 SSISLGIATRVLVEWNEGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLA 758
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
EEPLGPDDMW+CP CKEHRQA KKLDLW LPD+LVFHLKRF+YSRYLKNK+DTFVNFP+
Sbjct: 759 EEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVH 818
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+LDLSKY+K+K+ +SY+Y+L+A+SNHYGGLGGGHYTAYAK+
Sbjct: 819 DLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKL 859
>gi|4115922|gb|AAD03433.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=48.3, E=3.5e-13, N=2) and
(Pfam:PF00442, Score=40.0 E=5.2e-08, N=1) [Arabidopsis
thaliana]
Length = 1028
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/911 (59%), Positives = 679/911 (74%), Gaps = 56/911 (6%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG LP TP+EE++IV +L ++S+ +LK+GNLYF+IS RWY SW+ Y
Sbjct: 1 MTIPNSD-FMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKRWYTSWQEY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S + S G SS+ A RPGPIDN DII++ S+ +D ++RR L EG+
Sbjct: 60 V---ENSANECS------TGESSE-APRPGPIDNHDIIES---DSDINDPQLRRLLVEGE 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVP+QVW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEK-----------------------------ARIWDYF 210
L K+AS R+LYEKVC + G+ QEK A IWDYF
Sbjct: 167 LGKQASIRELYEKVCAMTGVPQEKFLLMKNALFRYEVVLFAALPHIDNFFYKQAHIWDYF 226
Query: 211 NKQRSTSPLDVSDQTLDDAMLQMDQDILLEV---QVDNGISMDSTGNDLALVPIEPSRSS 267
+K+++ +S ++L+++ L MDQDIL+EV + +M STGN+LALVP+EPSRS
Sbjct: 227 DKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLSSSSQSAMSSTGNELALVPLEPSRSI 286
Query: 268 LTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGN 327
+TIAGGP LSNGH+T F+ +P DDG DS + KGEKGGLAGL NLGN
Sbjct: 287 VTIAGGPTLSNGHSTTSNFSLFP------RITSEDDGRDSLSILGKGEKGGLAGLSNLGN 340
Query: 328 TCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAV 387
TCFMNSALQCL HTP + +YFL DYSD+IN +NPLGM GELA+AFGDLL+KLWSSGR AV
Sbjct: 341 TCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGRNAV 400
Query: 388 APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE 447
APRAFK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN+VK+KPYIE+KDS RPD+E
Sbjct: 401 APRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDE 460
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
VA E W HKARNDS+IVDV QGQYKSTLVCPVC K+SITFDPFMYL++PLPST+TR+MT
Sbjct: 461 VAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMT 520
Query: 508 VTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
+TVFY +GS LPMP+TV + K G +DLI AL TACCL DE LLLAEVY+H+IFR+FE
Sbjct: 521 ITVFYCDGSRLPMPYTVIVPKQGSIRDLITALGTACCLAEDESLLLAEVYDHKIFRYFEI 580
Query: 568 PAELISSIKDDEHIVAYRFDRKQGG--KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
P + +S+IKDDEHIVAYR ++ G K KLEI++ QE++ D ++GS+ KLFG P VT
Sbjct: 581 PLDSLSAIKDDEHIVAYRLNQIPKGSRKAKLEILHGGQERAVLDSVRGSDVKLFGTPFVT 640
Query: 626 YLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
Y+ E LSG DID +S LSPL + ++ +K H G +NG L + + ++ S +T E
Sbjct: 641 YVNTEPLSGTDIDAVISGFLSPLHKVHAPSKIHNGSDNGHLADATVDQASGILSSPDT-E 699
Query: 686 LEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDL 745
+++ RELSF++ LTDER + KP+Q +S + PG +VL++W + HE YD SY+ DL
Sbjct: 700 IDNASDRELSFRIFLTDERGLNIKPLQSESSISPGTVTRVLVEWNEGEHERYDSSYLSDL 759
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
P VHKT F+ KKTRQE+ISLFSCL+AFL EEPLGPDDMW+CP CKEHRQA KKLDLW LP
Sbjct: 760 PEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLP 819
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
D+LVFHLKRF+YSRYLKNK+DTFVNFP+ +LDLSKY+K+K+G+SY+Y+L+A+SNHYGGLG
Sbjct: 820 DILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLG 879
Query: 866 GGHYTAYAKVN 876
GGHYTAYAKV+
Sbjct: 880 GGHYTAYAKVD 890
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 39/41 (95%)
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG 847
+L+FHLK+F+YSRYLKNK++TFVNFPI +L+LSKY+K K+G
Sbjct: 987 ILLFHLKQFTYSRYLKNKINTFVNFPIHDLNLSKYVKYKNG 1027
>gi|297813507|ref|XP_002874637.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320474|gb|EFH50896.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 913
Score = 1058 bits (2735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/886 (60%), Positives = 668/886 (75%), Gaps = 36/886 (4%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG P TP EE++IV +L +S+ +LKEGNLYF+IS RWY SW++Y
Sbjct: 1 MTIPNSD-FMIENGVCDFPTTPAEEKRIVSELITESEDNLKEGNLYFVISKRWYASWQKY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V N S + RPG IDN DII++ S+ +D ++RR L EG
Sbjct: 60 V-------------EQSTNECLSGESSRPGAIDNHDIIES---ESDANDPQLRRLLVEGV 103
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVPQ+VW++L WY GGP + RK+I +G + VEV+ LCL L D RD S+T IR
Sbjct: 104 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYSRSYSVEVYPLCLMLTDGRDESRTTIR 163
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
L K+ S R+L EKVC + G+ QEKA IWDYF+K+++ S+++L+++ LQMDQDILL
Sbjct: 164 LGKQTSIRELCEKVCTMTGVAQEKAHIWDYFHKRKNGLLDPSSNKSLEESSLQMDQDILL 223
Query: 240 EVQ--VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
EV + ++ S GN+LALVP+EPSRS +TIAGGP LSNGH+T +F+ +P
Sbjct: 224 EVDGSSSSQYAISSAGNELALVPLEPSRSRVTIAGGPTLSNGHSTSSKFSLFP------R 277
Query: 298 FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEIN 357
DDG +S + KGEKGGLAGL NLGNTCFMNSALQCL HTP + YFL DYSD+IN
Sbjct: 278 ITSEDDGCNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVDYFLQDYSDDIN 337
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLGM GELA+AFGDLL+KLWSS R AVAPR+FK KLARFAPQFSGYNQHDSQELLAF
Sbjct: 338 RDNPLGMCGELAIAFGDLLKKLWSS-RNAVAPRSFKTKLARFAPQFSGYNQHDSQELLAF 396
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDV------FQGQ 471
LLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARNDS+IV+V FQGQ
Sbjct: 397 LLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVNVCQVFDFFQGQ 456
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
YKSTLVCPVC K+SITFDPFMYL++PLPST+TR+MTVTVFY +GS LPMP+TVT+ KHG
Sbjct: 457 YKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSRLPMPYTVTVPKHGS 516
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--K 589
+DLI AL TACCL DE LLLAEVY+H+IFR+FENP + +S+IKDDEHIVAYR ++ K
Sbjct: 517 IRDLITALGTACCLADDESLLLAEVYDHKIFRYFENPLDSLSAIKDDEHIVAYRLNQMPK 576
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR 649
G KLEI++ E+ + ++G + KLFG PLVTY+ + LSG DID +S LSPL
Sbjct: 577 GSGNAKLEILHGGLERDVLESVRGRDVKLFGTPLVTYVNTDPLSGTDIDAVISGFLSPLH 636
Query: 650 RTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK 709
R ++S+K H G +NG L + + +++ S +T E++D +LSF++ LTDER + K
Sbjct: 637 RVHASSKIHNGSDNGHLADATTDETSASLSSPDT-EIDDASDGQLSFRIFLTDERGLNYK 695
Query: 710 PIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
P+Q +S + PG KVL++W + HE YD SY+ DLP VHKT F+ KKTRQEAISLFSCL
Sbjct: 696 PLQSESSVSPGTITKVLVEWNEGEHETYDSSYLNDLPEVHKTSFSAKKTRQEAISLFSCL 755
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+AFL EEPLGPDDMW+CP CKEHRQA KKLDLW LPD+LVFHLKRF+YSRYLKNK+DTFV
Sbjct: 756 EAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFV 815
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
NFPI +LDLSKY+K+K+G+SY+Y+L+AISNHYGGLGGGHYTAYAK+
Sbjct: 816 NFPIQDLDLSKYVKNKNGQSYLYELYAISNHYGGLGGGHYTAYAKL 861
>gi|4539437|emb|CAB40025.1| putative protein [Arabidopsis thaliana]
gi|7267756|emb|CAB78182.1| putative protein [Arabidopsis thaliana]
Length = 937
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/908 (60%), Positives = 676/908 (74%), Gaps = 55/908 (6%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG P TP+EE++IV +L +S+ +LKEGNLYF+IS RWY SWE+Y
Sbjct: 1 MTIPNSD-FMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKRWYTSWEKY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S +++G SS+ A RPGPIDN DII++ S+ +D ++RR L E
Sbjct: 60 V---EQSTKE------YISGESSE-ASRPGPIDNHDIIES---ESDVNDPQLRRLLMERV 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVPQ+VW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEK---------------------------ARIWDYFNK 212
L K+AS R+LYEKVC L G+ QEK A IWDYF+K
Sbjct: 167 LGKQASIRELYEKVCALTGVPQEKFLLMKDALFRYEDFAALPHIDIFFYKQAHIWDYFDK 226
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQ--VDNGISMDSTGNDLALVPIEPSRSSLTI 270
+++ +S ++L+++ L MDQDILLEV + +M STGN+LALVP+EPSRSS+TI
Sbjct: 227 RKNGLLDSLSYKSLEESSLHMDQDILLEVDGSSSSQSAMSSTGNELALVPLEPSRSSVTI 286
Query: 271 AGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCF 330
AGGP LSNGH+T F+ +P DDG +S + KGEKGGLAGL NLGNTCF
Sbjct: 287 AGGPTLSNGHSTTSNFSLFP------RITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCF 340
Query: 331 MNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
MNSALQCL HTP + +YFL DYSD+IN +NPLGM GELA+AFGDLL+KLWSSGR +VAPR
Sbjct: 341 MNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPR 400
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
AFK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN+VK+KPYIE+KDS RPD+EVA
Sbjct: 401 AFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAE 460
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W HKARNDS+IVDV QGQYKSTLVCP C K+SITFDPFMYL++PLPST+TR+MTVTV
Sbjct: 461 ELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVPLPSTLTRSMTVTV 520
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
FY +GS LPMP+TV + K+G +DLI AL TAC L DE LLLAEVY+H+IF++FENP +
Sbjct: 521 FYCDGSHLPMPYTVIVPKNGSIRDLITALGTACLLAEDESLLLAEVYDHKIFKYFENPLD 580
Query: 571 LISSIKDDEHIVAYRFDR--KQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+SSIKDDEHIVAYR ++ K GK KLEI++ Q++ + ++G + KLFG P VTY+
Sbjct: 581 SLSSIKDDEHIVAYRLNQMPKGSGKAKLEILHGGQKRPILESVRGRDVKLFGTPFVTYVN 640
Query: 629 EEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPE-VIDELSNSHNESVETAELE 687
E LSGADID +S+ LSPL + ++ +K H G ENG LP+ +DE S S E++
Sbjct: 641 TEPLSGADIDAVLSRFLSPLHKVHAPSKIHNGSENGHLPDATVDEASEIL--SSPDTEID 698
Query: 688 DLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPV 747
D RELSF++ LTDER + KP+Q +S + G +VL++W + HE YD SY+ DLP
Sbjct: 699 DASDRELSFRIFLTDERGLNFKPLQSESSISLGIATRVLVEWNEGEHERYDSSYLSDLPE 758
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
VHKT F+ KKTRQE+ISLFSCL+AFL EEPLGPDDMW+CP CKEHRQA KKLDLW LPD+
Sbjct: 759 VHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDI 818
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LVFHLKRF+YSRYLKNK+DTFVNFP+ +LDLSKY+K+K+ +SY+Y+L+A+SNHYGGLGGG
Sbjct: 819 LVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG 878
Query: 868 HYTAYAKV 875
HYTAYAK+
Sbjct: 879 HYTAYAKL 886
>gi|4115923|gb|AAD03434.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=40.0, E=5.2e-08, N=1) and
(Pfam:PF00442, Score=37.9 E=5.3e-10, N=1) [Arabidopsis
thaliana]
Length = 887
Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/917 (59%), Positives = 671/917 (73%), Gaps = 73/917 (7%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG P TP+EE++IV +L +S+ +LKEGNLYF+IS RWY SWE+Y
Sbjct: 1 MTIPNSD-FMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKRWYTSWEKY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S +++G SS+ A RPGPIDN DII++ S+ +D ++RR L E
Sbjct: 60 V---EQSTKE------YISGESSE-ASRPGPIDNHDIIES---ESDVNDPQLRRLLMERV 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVPQ+VW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEK----------------------ARIWDYFNKQRSTS 217
L K+AS R+LYEKVC L G+ QEK A IWDYF+K+++
Sbjct: 167 LGKQASIRELYEKVCALTGVPQEKDALFRYEDFAALPHIDIFFYKQAHIWDYFDKRKNGL 226
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQ--VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPA 275
+S ++L+++ L MDQDILLEV + +M STGN+LALVP+EPSRSS+TIAGGP
Sbjct: 227 LDSLSYKSLEESSLHMDQDILLEVDGSSSSQSAMSSTGNELALVPLEPSRSSVTIAGGPT 286
Query: 276 LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSAL 335
LSNGH+T F+ +P DDG +S + KGEKGGLAGL NLGNTCFMNSAL
Sbjct: 287 LSNGHSTTSNFSLFP------RITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSAL 340
Query: 336 QCLVHTPDLAQYFLGDYSDEINTENPLGM--------------HGELALAFGDLLRKLWS 381
QCL HTP + +YFL DYSD+IN +NPLGM GELA+AFGDLL+KLWS
Sbjct: 341 QCLAHTPPIVEYFLQDYSDDINRDNPLGMCVSACYLNLLFTHVMGELAIAFGDLLKKLWS 400
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
SGR +VAPRAFK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN+VK+KPYIE+KDS
Sbjct: 401 SGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSD 460
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
RPD+EVA E W HKARNDS+IVDV QGQYKSTLVCP C K+SITFDPFMYL++PLPST
Sbjct: 461 SRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPACGKISITFDPFMYLSVPLPST 520
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
+TR+MTVTVFY +GS LPMP+TV + K+G +DLI AL TAC L DE LLLAEVY+H+I
Sbjct: 521 LTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLITALGTACLLAEDESLLLAEVYDHKI 580
Query: 562 FRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIKLEIVNRWQEKSASDYLKGSERKLF 619
F++FENP + +SSIKDDEHIVAYR ++ K GK KLEI++ Q++ KLF
Sbjct: 581 FKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAKLEILHGGQKRDV---------KLF 631
Query: 620 GAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPE-VIDELSNSHN 678
G P VTY+ E LSGADID +S+ LSPL + ++ +K H G ENG LP+ +DE S
Sbjct: 632 GTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHAPSKIHNGSENGHLPDATVDEASEIL- 690
Query: 679 ESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYD 738
S E++D RELSF++ LTDER + KP+Q +S + G +VL++W + HE YD
Sbjct: 691 -SSPDTEIDDASDRELSFRIFLTDERGLNFKPLQSESSISLGIATRVLVEWNEGEHERYD 749
Query: 739 PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
SY+ DLP VHKT F+ KKTRQE+ISLFSCL+AFL EEPLGPDDMW+CP CKEHRQA KK
Sbjct: 750 SSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKK 809
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAIS 858
LDLW LPD+LVFHLKRF+YSRYLKNK+DTFVNFP+ +LDLSKY+K+K+ +SY+Y+L+A+S
Sbjct: 810 LDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVS 869
Query: 859 NHYGGLGGGHYTAYAKV 875
NHYGGLGGGHYTAYAKV
Sbjct: 870 NHYGGLGGGHYTAYAKV 886
>gi|297846262|ref|XP_002891012.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336854|gb|EFH67271.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 894
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/883 (60%), Positives = 645/883 (73%), Gaps = 44/883 (4%)
Query: 1 MTIRDSSVLMMENGGSC-LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWER 59
MTI DS E+ G C +P +P+EER+IV +L N+++ DLKEGNLYF+IS RWY W+R
Sbjct: 1 MTIPDS-----ESTGVCEVPYSPEEERRIVTELNNEAEADLKEGNLYFVISNRWYTRWQR 55
Query: 60 YVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEG 119
+V + + RPGPIDN DII + S+ D ++R LEEG
Sbjct: 56 FVG---------------LLTEETSEVTRPGPIDNHDII---DSESDASDPQLRIMLEEG 97
Query: 120 QDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVI 178
DY LVPQQVW KL WYKGGP LPRK+IS+G + VEV+ LCLKL DSRD S T+I
Sbjct: 98 VDYTLVPQQVWRKLVEWYKGGPPLPRKLISQGFYTKSFSVEVYPLCLKLTDSRDESTTII 157
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
RLSK+AS QLYE VC RG+ +EKARIWDYF K++S S+++++++ LQ++QDIL
Sbjct: 158 RLSKQASIGQLYEMVCAGRGVAKEKARIWDYFEKKKSVLLDPSSEKSVEESGLQLNQDIL 217
Query: 239 LEV--QVDNGISMDSTGNDLALVPIEPSRSSL--TIAGGPALSNGHTTGYRFNQYPGSSF 294
L+V + M GN+LALVP+EP+RS + GG LSNGH+ G +F S F
Sbjct: 218 LDVDGSASSQYDMSLAGNELALVPLEPTRSDAMDIVRGGGNLSNGHSNGSKF-----SLF 272
Query: 295 GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD 354
G + D S +T KGE+ GL GLQNLGNTCFMNS LQCL HTP + +YFL DYS
Sbjct: 273 GRNAFEDDV---SSSTFGKGERRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYSS 329
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
+IN ENPLGM GELA+AFG+LLRKLWSSG+ AVAPRAFK KLARFAPQFSGYNQHDSQE+
Sbjct: 330 DINAENPLGMRGELAIAFGELLRKLWSSGQNAVAPRAFKTKLARFAPQFSGYNQHDSQEM 389
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLN+VK+KPYIE KDS GRPD+EVA E WK HKARNDS+IVDV QGQYKS
Sbjct: 390 LAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVCQGQYKS 449
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
TLVCP C K+SITFDPFMYL+LPLPS+ TR+MTVTVFY +GS LPMP+TVT+ K G C+D
Sbjct: 450 TLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSCRD 509
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGG 592
L AL TACCL DE LLLAEVY+H++F++FENP EL++ IKD+E IVAYRF++ K G
Sbjct: 510 LSNALGTACCLNNDESLLLAEVYDHKVFKYFENPLELLNGIKDNERIVAYRFNQMHKGLG 569
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
K+KLEI++ QEK Y G KLFG PLVTY+ +E L+G+DI ++ LLSPLRR +
Sbjct: 570 KVKLEILHGEQEK----YDSGRGPKLFGTPLVTYINKEPLTGSDIAASIFGLLSPLRRVH 625
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQ 712
S+ H EN +P+V DE S S + E + RELSF L L D S + +
Sbjct: 626 MSSIVHSENENSHVPDVADESSRSASSRDTETEDNAVDDRELSFSL-LPDYHSFSLQLLD 684
Query: 713 KDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAF 772
DS++ PG KVL+ W + HE YD SY+ DLP VHKT F KK RQE ISLFSCL+AF
Sbjct: 685 SDSVVNPGSVTKVLVKWNEKEHEKYDSSYLNDLPEVHKTSFLAKKIRQEEISLFSCLEAF 744
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFP 832
L EEPLGPDDMWYCP CKEHRQA KKLDLW LPD+LVFHLKRF+YSRY KNK+DT VNFP
Sbjct: 745 LAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFP 804
Query: 833 ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
I LDLSKY+ +KDG+SY+Y+L+AISNHYGGLGGGHYTAYAK+
Sbjct: 805 IHGLDLSKYVTNKDGQSYLYELYAISNHYGGLGGGHYTAYAKL 847
>gi|4539435|emb|CAB40023.1| putative protein [Arabidopsis thaliana]
gi|7267754|emb|CAB78180.1| putative protein [Arabidopsis thaliana]
Length = 928
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/896 (59%), Positives = 664/896 (74%), Gaps = 52/896 (5%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG LP TP+EE++IV +L ++S+ +LK+GNLYF+IS RWY SW+ Y
Sbjct: 1 MTIPNSD-FMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKRWYTSWQEY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S + S G SS+ A RPGPIDN DII++ S+ +D ++RR L EG+
Sbjct: 60 V---ENSANECS------TGESSE-APRPGPIDNHDIIES---DSDINDPQLRRLLVEGE 106
Query: 121 DYVLVPQQVWEKLF-CWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVI 178
DYVLVP+QVW++L C GGP + RK+I +G VEV+ LCL L D RD S+T
Sbjct: 107 DYVLVPKQVWKRLVEC---GGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRT-- 161
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
AS R+LYEKVC + G+ QEKA IWDYF+K+++ +S ++L+++ L MDQDIL
Sbjct: 162 -----ASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDIL 216
Query: 239 LEVQ---VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFG 295
+EV + +M STGN+LALVP+EPSRS +TIAGGP LSNGH+T F+ +P
Sbjct: 217 VEVDGLSSSSQSAMSSTGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFP----- 271
Query: 296 STFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDE 355
DDG DS + KGEKGGLAGL NLGNTCFMNSALQCL HTP + +YFL DY +
Sbjct: 272 -RITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYMLD 330
Query: 356 --------------INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAP 401
+N L GELA+AFGDLL+KLWSSGR AVAPRAFK KLARFAP
Sbjct: 331 TYMFYFLVMVLTCILNIILTLNFQGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAP 390
Query: 402 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARND 461
QFSGYNQHDSQELLAFLLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARND
Sbjct: 391 QFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARND 450
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S+IVDV QGQYKSTLVCPVC K+SITFDPFMYL++PLPST+TR+MT+TVFY +GS LPMP
Sbjct: 451 SVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMP 510
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
+TV + K G +DLI AL TACCL DE LLLAEVY+H+IFR+FE P + +S+IKDDEHI
Sbjct: 511 YTVIVPKQGSIRDLITALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHI 570
Query: 582 VAYRFDRKQGG--KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDI 639
VAYR ++ G K KLEI++ QE++ D ++GS+ KLFG P VTY+ E LSG DID
Sbjct: 571 VAYRLNQIPKGSRKAKLEILHGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDA 630
Query: 640 AVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLS 699
+S LSPL + ++ +K H G +NG L + + ++ S +T E+++ RELSF++
Sbjct: 631 VISGFLSPLHKVHAPSKIHNGSDNGHLADATVDQASGILSSPDT-EIDNASDRELSFRIF 689
Query: 700 LTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTR 759
LTDER + KP+Q +S + PG +VL++W + HE YD SY+ DLP VHKT F+ KKTR
Sbjct: 690 LTDERGLNIKPLQSESSISPGTVTRVLVEWNEGEHERYDSSYLSDLPEVHKTSFSAKKTR 749
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
QE+ISLFSCL+AFL EEPLGPDDMW+CP CKEHRQA KKLDLW LPD+LVFHLKRF+YSR
Sbjct: 750 QESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSR 809
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
YLKNK+DTFVNFP+ +LDLSKY+K+K+G+SY+Y+L+A+SNHYGGLGGGHYTAYAK+
Sbjct: 810 YLKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKL 865
>gi|42562472|ref|NP_174562.2| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
gi|166201360|sp|Q9MAQ3.2|UBP11_ARATH RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 11;
AltName: Full=Deubiquitinating enzyme 11; Short=AtUBP11;
AltName: Full=Ubiquitin thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|332193411|gb|AEE31532.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
Length = 892
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/862 (60%), Positives = 633/862 (73%), Gaps = 41/862 (4%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP+EER+IV +L N+++ DLKEGNLYF+IS RWY W+R+V + F S +
Sbjct: 18 TPEEERRIVTELNNEAEADLKEGNLYFVISNRWYTRWQRFV-----GLLTEEFRSGEPSE 72
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
V+ RPGPIDN DII + S+ D ++R LEEG DY LV Q+VW KL WYKGG
Sbjct: 73 VT-----RPGPIDNHDII---DSESDASDPQLRMMLEEGVDYTLVQQEVWRKLVKWYKGG 124
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P +PRK+IS+G + VEV+ LCL L DSRD S T+IRLSK+AS QLYE VC +G+
Sbjct: 125 PPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDESTTIIRLSKQASIGQLYEMVCAGKGV 184
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV--QVDNGISMDSTGNDLA 257
+EKARIWDYF K++S S+Q++++A LQ +QDILLEV + M N+LA
Sbjct: 185 AKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQDILLEVDGSASSQFVMSLAENELA 244
Query: 258 LVPIEPSRSSL--TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+VP+EP RS + GG LSNGH+ G++F+ + ++F DD S T KGE
Sbjct: 245 MVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTFK------DDV--SSRTFGKGE 296
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDL 375
K GL GLQNLGNTCFMNS LQCL HTP + +YFL DY +IN +NPLGM GELA+AFG+L
Sbjct: 297 KRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGEL 356
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
LRKLWSSG+ VAPRAFK KLARFAPQFSGYNQHDSQE+LAFLLDGLHEDLN+VK+KPYI
Sbjct: 357 LRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 416
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E KDS GRPD+EVA E WK HKARNDS+IVDVFQGQYKSTLVCP C K+SITFDPFMYL+
Sbjct: 417 EAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLS 476
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPLPS+ TR+MTVTVFY +GS LPMP+TVT+ K G C+DL AL TACCL DE LLLAE
Sbjct: 477 LPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSCRDLSNALGTACCLDNDESLLLAE 536
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIKLEIVNRWQEKSASDYLKG 613
VY+H++F+++ENP EL++ IKD+EHIVAYRF + K GK+KLEI++ QEKS+ +G
Sbjct: 537 VYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHKGPGKVKLEILHGEQEKSSD---RG 593
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDEL 673
K FG PLVTY+ +E LSG DI ++S LLSPLRR + S + G ENG +P DE
Sbjct: 594 P--KCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHMSCVVNSGNENGHVP---DES 648
Query: 674 SNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDV 733
S S E D RELS L L D + +P++ DS++ PG KVL+ W +
Sbjct: 649 SRSILSRDTETEDND---RELSLSL-LRDYYSFNLQPLESDSVVNPGSVTKVLVKWNEKE 704
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
HE YD SY+ DLP VHK KKT QE ISLFSCL+AFL EEPLGPDDMWYCP CKEHR
Sbjct: 705 HEKYDSSYLNDLPKVHKN-VLAKKTMQEGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHR 763
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QA KKLDLW LPD+LVFHLKRF+YSRY KNK+DT VNF I +LDLSKY+K++DG+SY+Y+
Sbjct: 764 QANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYE 823
Query: 854 LFAISNHYGGLGGGHYTAYAKV 875
L+AISNHYGGLGGGHYTAYAK+
Sbjct: 824 LYAISNHYGGLGGGHYTAYAKL 845
>gi|6910582|gb|AAF31287.1|AC006424_16 CDS [Arabidopsis thaliana]
Length = 887
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/862 (60%), Positives = 629/862 (72%), Gaps = 46/862 (5%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP+EER+IV +L N+++ DLKEGNLYF+IS RWY W+R+V + F S +
Sbjct: 18 TPEEERRIVTELNNEAEADLKEGNLYFVISNRWYTRWQRFV-----GLLTEEFRSGEPSE 72
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
V+ RPGPIDN DII + S+ D ++R LEEG DY LV Q+VW KL WYKGG
Sbjct: 73 VT-----RPGPIDNHDII---DSESDASDPQLRMMLEEGVDYTLVQQEVWRKLVKWYKGG 124
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P +PRK+IS+G + VEV+ LCL L DSRD S T+IRLSK+AS QLYE VC +G
Sbjct: 125 PPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDESTTIIRLSKQASIGQLYEMVCAGKG- 183
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV--QVDNGISMDSTGNDLA 257
ARIWDYF K++S S+Q++++A LQ +QDILLEV + M N+LA
Sbjct: 184 ----ARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQDILLEVDGSASSQFVMSLAENELA 239
Query: 258 LVPIEPSRSSL--TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+VP+EP RS + GG LSNGH+ G++F+ + ++F DD S T KGE
Sbjct: 240 MVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTF------KDDV--SSRTFGKGE 291
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDL 375
K GL GLQNLGNTCFMNS LQCL HTP + +YFL DY +IN +NPLGM GELA+AFG+L
Sbjct: 292 KRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGEL 351
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
LRKLWSSG+ VAPRAFK KLARFAPQFSGYNQHDSQE+LAFLLDGLHEDLN+VK+KPYI
Sbjct: 352 LRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 411
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E KDS GRPD+EVA E WK HKARNDS+IVDVFQGQYKSTLVCP C K+SITFDPFMYL+
Sbjct: 412 EAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLS 471
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPLPS+ TR+MTVTVFY +GS LPMP+TVT+ K G C+DL AL TACCL DE LLLAE
Sbjct: 472 LPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSCRDLSNALGTACCLDNDESLLLAE 531
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIKLEIVNRWQEKSASDYLKG 613
VY+H++F+++ENP EL++ IKD+EHIVAYRF + K GK+KLEI++ QEKS+ +G
Sbjct: 532 VYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHKGPGKVKLEILHGEQEKSSD---RG 588
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDEL 673
K FG PLVTY+ +E LSG DI ++S LLSPLRR + S + G ENG +P DE
Sbjct: 589 P--KCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHMSCVVNSGNENGHVP---DES 643
Query: 674 SNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDV 733
S S E D RELS L L D + +P++ DS++ PG KVL+ W +
Sbjct: 644 SRSILSRDTETEDND---RELSLSL-LRDYYSFNLQPLESDSVVNPGSVTKVLVKWNEKE 699
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
HE YD SY+ DLP VHK KKT QE ISLFSCL+AFL EEPLGPDDMWYCP CKEHR
Sbjct: 700 HEKYDSSYLNDLPKVHKN-VLAKKTMQEGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHR 758
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QA KKLDLW LPD+LVFHLKRF+YSRY KNK+DT VNF I +LDLSKY+K++DG+SY+Y+
Sbjct: 759 QANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYE 818
Query: 854 LFAISNHYGGLGGGHYTAYAKV 875
L+AISNHYGGLGGGHYTAYAK+
Sbjct: 819 LYAISNHYGGLGGGHYTAYAKL 840
>gi|357145636|ref|XP_003573712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Brachypodium distachyon]
Length = 931
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/881 (55%), Positives = 620/881 (70%), Gaps = 38/881 (4%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
SCLPCT +EER V L Q++ ++K G+L +L+S W+ +W+ YV G DN +
Sbjct: 12 AASCLPCTAEEERAAVDSLTRQAEANVKTGDLRYLVSQSWWNNWQSYV-GLPRHGDNDT- 69
Query: 74 DSPHMNGVSSKRAERPGPIDNSDII--QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWE 131
D P S+ RPG IDNS ++ + +GS E E++R L EG+DY LVP++VW
Sbjct: 70 DMP------SQPTNRPGEIDNSKLVLEETISGSEEP---ELQRTLREGEDYALVPEEVWR 120
Query: 132 KLFCWYKGGPALPRKMISEGIVNEKR--VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQL 189
KL+ WYKGGP + RK+I E N KR V+V+ L LKLID RD+S+ +I++S+KA +L
Sbjct: 121 KLYGWYKGGPVISRKVICED-PNSKRYIVDVYPLRLKLIDERDSSERIIQISRKAKVHEL 179
Query: 190 YEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM 249
Y+ VC L +EQ K IWD+F K + L ++TL++A L MDQ+ILLE+ D+ S
Sbjct: 180 YQLVCSLISVEQSKLHIWDHFQKMK-VKKLTNFNETLEEAQLMMDQEILLEISADDTWSS 238
Query: 250 D----STGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
D S N+LA+VP+EPS SS +IAGGP SNG+++G + +SF D +DGY
Sbjct: 239 DLSTRSFNNELAIVPLEPSTSSFSIAGGPTFSNGYSSGIGSSFSQDNSFNPLQRDAEDGY 298
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMH 365
S++ K + GL+GL NLGNTCFMNSA+Q LVHTP L QYFL DYS EINTENPLG+
Sbjct: 299 SSFSNGVKDDMHGLSGLHNLGNTCFMNSAIQALVHTPPLVQYFLKDYSQEINTENPLGLQ 358
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GELA+AFGDLL+KLWS+GR +V PRAFK KL+RFAPQFSGYNQHDSQELLAFLLDGLHED
Sbjct: 359 GELAVAFGDLLQKLWSAGRTSVPPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGLHED 418
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LNRVK+KPYIE KD+ GRP+EE A ECW NHKARNDS+IVD FQGQYKSTLVCP C+K+S
Sbjct: 419 LNRVKKKPYIEAKDADGRPEEEFAEECWNNHKARNDSIIVDKFQGQYKSTLVCPECNKIS 478
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
+TFDPFMYL+LPLPSTVTR MTVTVF G LPMP+TVT+ K+G C+DL ALS ACCL
Sbjct: 479 VTFDPFMYLSLPLPSTVTRMMTVTVFSGTGDSLPMPYTVTVQKNGVCRDLCKALSDACCL 538
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEK 605
K E LLLAEVY+++++R+F +P E + IKD++ +VAY+ +++EI++R ++
Sbjct: 539 KDSETLLLAEVYDNRMYRYF-SPLEQLQIIKDNDKLVAYKLPVGHEKLLRVEILHRKVDR 597
Query: 606 SASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE--- 662
+ RKL G+PLVT + S ADI AV+ +L+P R AK H E
Sbjct: 598 FTPELQFNITRKLIGSPLVTCIPNHSTSKADIYAAVTAVLAPFVR----AKVHTPDESAV 653
Query: 663 --NGFLPE----VIDELSNSHNESVETAEL-EDLCSRELSFQ-LSLTDERISSCKPIQKD 714
NG P V+ + S + + T+ L E+ ELS LSL+DE+ PIQ+D
Sbjct: 654 KLNGNGPSLDGIVLTDNSACSEKGLSTSNLDEETADAELSPSWLSLSDEKGHVRNPIQED 713
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
S G +++ +DW+D HE+Y+ Y+ DLP V KTGF KKTRQEA++LFSCLDAFL
Sbjct: 714 SNHVVGLPMRLSMDWSDREHEIYNLKYMDDLPDVFKTGFMSKKTRQEAVNLFSCLDAFLK 773
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
+EPLGPDDMWYCP CKEHRQA KKLDLW LP++LV HLKRFSYSRY+KNKLDT+V FPI
Sbjct: 774 DEPLGPDDMWYCPSCKEHRQARKKLDLWRLPEILVVHLKRFSYSRYMKNKLDTYVTFPIH 833
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+LD+SKY K G +Y+L+A+ NHYGGLGGGHY+AYAK+
Sbjct: 834 DLDMSKYAKHTSGPP-IYELYAVINHYGGLGGGHYSAYAKL 873
>gi|242034643|ref|XP_002464716.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
gi|241918570|gb|EER91714.1| hypothetical protein SORBIDRAFT_01g025350 [Sorghum bicolor]
Length = 935
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/889 (53%), Positives = 613/889 (68%), Gaps = 49/889 (5%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
SCLPCT EER++V L +++ ++K G+L +L+S W+ W+ YV
Sbjct: 12 ASSCLPCTAAEEREVVDALTREAEKNVKHGDLRYLVSQSWWMEWQGYV----------GI 61
Query: 74 DSPHMNGVSS--KRAERPGPIDNSDII--QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S NG + RPG IDNS ++ + NGS E E++R L EG+ Y LVPQ+V
Sbjct: 62 FSHGENGTEQFPQAMNRPGEIDNSKLVSAERINGSEEP---ELQRTLREGEHYTLVPQEV 118
Query: 130 WEKLFCWYKGGPALPRKMISEGIVNEKR-VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQ 188
W++L+ WYKGGP +PRK+I + +++ V+V+ LCLKLID RD+ Q V R+S+KA +
Sbjct: 119 WQRLYEWYKGGPEIPRKVIFDNPIDKTYIVDVYPLCLKLIDGRDSCQKVFRISRKAKVHE 178
Query: 189 LYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV---DN 245
LY VC L +EQ + IWDY+ + + L+ ++TL++A L MDQ+ILLE+++ +
Sbjct: 179 LYSMVCSLMSVEQSEIVIWDYYQRSKGKKLLN-QNETLEEAQLTMDQEILLEMKLGESSS 237
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
G S ST ++LAL+P+EPS SS +IAGGP S G ++G + +SF D +DGY
Sbjct: 238 GFSTRSTNDELALIPLEPSTSSFSIAGGPTFSKGFSSGIGSSFSQDNSFSPLLRDSEDGY 297
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMH 365
+S + K GL+GL NLGNTCFMNSA+Q LVHTP L QYFL DY+ EINTENPLG+
Sbjct: 298 NSLSNGTKDGTHGLSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINTENPLGLQ 357
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GELA+AFG+LLRKLWSSGR +VAPRAFK KL+RFAPQFSGYNQHDSQELLAFLLDGLHED
Sbjct: 358 GELAIAFGELLRKLWSSGRTSVAPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGLHED 417
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LNRVK+KPYIE KD+ GRPD+E A ECW HKARNDS+IVD FQGQYKSTLVCPVC+K+S
Sbjct: 418 LNRVKKKPYIEAKDADGRPDDEFAEECWNYHKARNDSIIVDRFQGQYKSTLVCPVCNKIS 477
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
+TFDPFMYL+LPLPSTVTR +TVTVF G LPMP+TVT+ K+G C+DL AL+ CCL
Sbjct: 478 VTFDPFMYLSLPLPSTVTRMITVTVFSGTGDVLPMPYTVTVQKNGNCRDLTKALADVCCL 537
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEK 605
K E LLLAEVY +I+R+ NP E + SIKD++ +VAYR ++LEI++R ++
Sbjct: 538 KDSETLLLAEVYERRIYRYLTNPIEGLHSIKDEDILVAYRLPVGYEKLLRLEILHRRADR 597
Query: 606 SASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH-----GG 660
+ RKL G P+VT + +DI AVS +L P R AKAH
Sbjct: 598 FLVEPQFNINRKLIGCPIVTCIPNGSTGKSDIYAAVSAVLVPFVR----AKAHSPDVSAV 653
Query: 661 KENGFLPEV------------IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSC 708
K NG P + + LS S + + A +++L L FQLSLTDE+ S
Sbjct: 654 KLNGNGPSLDGIVLTDNGTTSEEGLSISRSSEDDNAAVDEL----LPFQLSLTDEKGSIR 709
Query: 709 KPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSC 768
I DS G I+VL+DW++ H +Y+ Y+ LP V K GF KKTRQEA++LFSC
Sbjct: 710 NAIDTDSNRGLGLVIRVLMDWSEKEHGMYNIDYMDGLPEVFKPGFMSKKTRQEAVNLFSC 769
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
LDAFL EEPLGPDDMWYCP CKEHRQA+KKLDLW LP++LV HLKRFSYSRY+KNKLDTF
Sbjct: 770 LDAFLKEEPLGPDDMWYCPGCKEHRQASKKLDLWRLPEILVVHLKRFSYSRYMKNKLDTF 829
Query: 829 VNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
VNFPI +L++SKY+K S+ + +Y+L+A+ NHYGGLGGGHY+AYAK+
Sbjct: 830 VNFPIHDLNMSKYVKLTSRGDQHPMYELYAVINHYGGLGGGHYSAYAKL 878
>gi|115481222|ref|NP_001064204.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|78707833|gb|ABB46808.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113638813|dbj|BAF26118.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|215767234|dbj|BAG99462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612471|gb|EEE50603.1| hypothetical protein OsJ_30790 [Oryza sativa Japonica Group]
Length = 931
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/879 (52%), Positives = 614/879 (69%), Gaps = 32/879 (3%)
Query: 13 NGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNIS 72
+ SCLPCT +EER +V L +++ ++K+G+L +L+S W+ +W+ YV +P ++
Sbjct: 11 HAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVGLIKPDENDAD 70
Query: 73 FDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEK 132
+ + RPG IDNS ++ SS GD+ E++R L EG DY LVPQ+VW K
Sbjct: 71 --------MLPQAPSRPGEIDNSKLVSE-ESSSIGDEPELQRTLREGDDYALVPQEVWRK 121
Query: 133 LFCWYKGGPALPRKMISEGIVNEKR-VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYE 191
L WYKGGP L R++I + V+V+ L LKL D RD+ + +IR+S+KA +LY
Sbjct: 122 LHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELYS 181
Query: 192 KVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMD- 250
VC L +EQ K IWD++ K + +++ ++T+++A L MDQ+I++E + D+ D
Sbjct: 182 LVCSLLSVEQSKIDIWDFYQKTKGKKLINL-NETVEEAQLMMDQEIIIEAKADDAWCSDL 240
Query: 251 --STGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
+ N+LAL+P+EPS SS +IAGGPA SNG ++G+ + +SF D +DGY S+
Sbjct: 241 GTRSNNELALIPLEPSTSSFSIAGGPAFSNGFSSGFGSSFSQDNSFSPLLRDAEDGY-SF 299
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ K + GL+GL NLGNTCFMNSA+Q LVHTP L +YFL DYS EINTENPLG+ GEL
Sbjct: 300 SNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGEL 359
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A AFG+LLRKLWS+GR ++APR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 360 ATAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 419
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK+KPYIE KD+ GRPDEE+A ECW HKARNDS+IVD FQGQYKSTLVCP C K+S+TF
Sbjct: 420 VKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTF 479
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPLPSTVTR + VTVF G LPMP+TV + K+G C DLI +LS CCL+
Sbjct: 480 DPFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSC 539
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E LLLAEVY+H+I+R++ NP+E + +KD++ +VAYR +++EI++R ++ S
Sbjct: 540 ETLLLAEVYDHRIYRYW-NPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTS 598
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH-----GGKEN 663
+ + RKL G+PLVT + + ADI VS LL+P R AK H K N
Sbjct: 599 ESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVR----AKVHTLDESATKLN 654
Query: 664 GFLPE----VIDELSNSHNESVETAELEDLCSRE--LSFQLSLTDERISSCKPIQKDSIL 717
P V+ + + E V T+ +++ + E L FQL LTD++ + + I DS
Sbjct: 655 SNGPSLDGIVLTDNGVTCEEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNG 714
Query: 718 KPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
PG +++L+DW+D HE+YD Y+ +L VV K GF KK RQEA++LFSCLDAFL +EP
Sbjct: 715 VPGSTMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEP 774
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLD 837
LGPDDMWYCP+C EH+QA+KKLDLW LP++LV HLKRFSYSR++KNKLDTFVNFPI +LD
Sbjct: 775 LGPDDMWYCPRCTEHKQASKKLDLWRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLD 834
Query: 838 LSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+S+Y S+ + +Y+L+A+ NHYGG+GGGHY+AYAK+
Sbjct: 835 MSRYANHSRGDQPPIYELYAVINHYGGMGGGHYSAYAKL 873
>gi|224089911|ref|XP_002308863.1| predicted protein [Populus trichocarpa]
gi|222854839|gb|EEE92386.1| predicted protein [Populus trichocarpa]
Length = 951
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/888 (48%), Positives = 583/888 (65%), Gaps = 45/888 (5%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHM-- 78
TP+EER +++D+ S+ + KEG+ ++LI+ RW++ W YV ++ ++ N D M
Sbjct: 18 TPEEERVLIRDIAITSENNSKEGDSFYLITQRWWQHWIDYVNQEQTNVTN---DGSSMLE 74
Query: 79 --NGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCW 136
+ VSS R RP IDNSD+I + N E+ L EG+DY+L+PQ+VW +L+ W
Sbjct: 75 NCDAVSSSR--RPASIDNSDLIHDANSEESNVGFEIHDTLLEGRDYILLPQEVWNQLYSW 132
Query: 137 YKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK 195
Y GGPAL RK+IS G+ E VEV+ L L+L Q+ IR+SKK + +L+++ C+
Sbjct: 133 YGGGPALARKVISSGLSQTEYAVEVYPLRLRLFVMPKGDQSTIRISKKETIGELHKRACE 192
Query: 196 LRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD-NGISMD---- 250
L + E+ IWDY+ QR + ++ D+TLDDA LQMDQDIL+EV + NG ++
Sbjct: 193 LFDLNLEQVCIWDYYG-QRKHALMNDMDRTLDDANLQMDQDILVEVHNNANGTALSRFIR 251
Query: 251 ------STGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
ST + + +EPS+SSL+IAGG + S G + G + S ++D+
Sbjct: 252 SAQGNGSTVKEASSFLLEPSKSSLSIAGGLSASRGASRGGSTELSQSLNLTSQGRELDNT 311
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGM 364
Y +G GGL GLQNLGNTCFMNSA+QCLVHT + A+YF DY EIN +NPLGM
Sbjct: 312 YGISTVTTRGSSGGLIGLQNLGNTCFMNSAIQCLVHTSEFAKYFREDYHQEINWQNPLGM 371
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
GELALAFG+LLR+LW+ GR A+APR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHE
Sbjct: 372 VGELALAFGELLRRLWAPGRTAIAPRQFKMKLARFAPQFSGYNQHDSQELLAFLLDGLHE 431
Query: 425 DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
DLNRVK KPY + KD+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCP C K+
Sbjct: 432 DLNRVKHKPYKKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPECHKI 491
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
S+TFDPFMYL+LPL ST TR+MTVT+F +GS LP TVT+ K G C+DLI ALS+AC
Sbjct: 492 SVTFDPFMYLSLPLQSTTTRSMTVTIFTCDGSALPFSCTVTVPKQGRCRDLINALSSACS 551
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQE 604
LK +E L LAEV NH RF E+P +S IKDD+H+VAY+ + + + +++R QE
Sbjct: 552 LKNNEDLKLAEVRNHLFQRFLEDPLISLSMIKDDDHLVAYKIPKSLKKTLLIRLIHRRQE 611
Query: 605 KSASDYLKGSERKLFGAPLVTYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKEN 663
+ K FG PLV+ + +E ++ DI V+ +LSPL R+ S +A +
Sbjct: 612 QEMGATQAAQHWKPFGTPLVSLISRDEVITRGDIQTVVNTMLSPLLRSESLRQADTSEP- 670
Query: 664 GFLPEVIDE----------LSNSHNESVETAELEDLCSRELSFQL-----SLTDERISSC 708
FL E SNS ++SV + + +L QL + D +
Sbjct: 671 -FLSLAASEKRRDSSSGEACSNSMSDSV-NKDGNAVTLFKLPLQLVEESNACVDLSVGED 728
Query: 709 KPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSC 768
K I+ S + V +DW+ ++ E YD Y+++LP V K G KK R E +SL++C
Sbjct: 729 KAIKLSST---STSVLVYVDWSRELLEKYDTHYLENLPEVFKYGPVNKKARTEPLSLYTC 785
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
L+AFL EEPL P+DMWYCP+CKE RQA+KKLDLW LP+VLV HLKRFS+SR +K+KL+TF
Sbjct: 786 LEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSFSRSMKHKLETF 845
Query: 829 VNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
VNFPI + DL+KY+ +K+ + +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 846 VNFPIHDFDLTKYIANKNNTQRQLYELYALTNHYGGMGSGHYTAHIKL 893
>gi|296088825|emb|CBI38283.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/885 (48%), Positives = 571/885 (64%), Gaps = 34/885 (3%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
+P+EER ++D ++ KEG+ ++LI+ RW++ W YV D+ + ++S S H +
Sbjct: 16 SPEEERLAIRDFVISAEAHTKEGDTFYLITQRWWQQWLEYVNQDQANNIDVSSLSEHCDS 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
VSS +RP IDNSD+I + +E+ L EG+DY+L+PQ+VW +L+ WY GG
Sbjct: 76 VSSSDVKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILLPQEVWNQLYAWYGGG 135
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P LPRK+I+ G+ VEV+ L L+L+ + + IR+SKK + +L+ + C++ +
Sbjct: 136 PTLPRKVINSGLSQTGLSVEVYPLRLQLVVVPKGAHSTIRISKKETIGELHRRACEIFDL 195
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM---------- 249
E+ IWDY+ R + ++ D+TLDDA +Q DQD+L+EV + S
Sbjct: 196 NMEQVCIWDYYG-HRKHALMNDMDKTLDDANIQTDQDVLVEVHSNGSSSAFGGCMSSVQE 254
Query: 250 -DSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
S + V +EPS+SSL+IAGG + S G + + S ++D Y
Sbjct: 255 NGSADKETMSVLVEPSKSSLSIAGGLSASKGVSRSCSSELSQSQNLTSPVRELDSTYGVS 314
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ +G GGL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GEL
Sbjct: 315 GVSTRGATGGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHKEINWQNPLGMVGEL 374
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFGDLLRKLW+ GR VAPR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 375 ALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 434
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC+K+S+TF
Sbjct: 435 VKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKISVTF 494
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPL ST+TRTMTVTVF +GS LP TVT+ K G C+DLI ALS AC +K +
Sbjct: 495 DPFMYLSLPLQSTITRTMTVTVFTCDGSALPSACTVTVPKQGRCRDLIQALSGACSVKHN 554
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E LLLAE+ NH I RF E+P L+S+IKDD+H+ AY+ + I L++++R +E+
Sbjct: 555 EKLLLAEIRNHLIDRFLEDPLILLSTIKDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIG 614
Query: 609 DYLKGSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRT---------------- 651
+ K K +G PLV+ + ++ ++ DI V +LSP+ RT
Sbjct: 615 NAQKSFGWKPYGTPLVSPISCDDVITRGDIQSIVYTMLSPMLRTERQGHTDISETSISVA 674
Query: 652 YSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPI 711
S F + +L + S +T L L + + + D + KPI
Sbjct: 675 ASDPSCDITTSEAFTDSIESDLKDMDGNSYKTVTLSKLPLQLVDENNACIDLSVGEEKPI 734
Query: 712 QKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
+ S I V +DW+ E YD Y+++LP V K G KK R E +SL++CL+A
Sbjct: 735 KLSS---SSMSILVFVDWSHKFLEKYDTHYLENLPEVFKYGPVTKKARTEPLSLYTCLEA 791
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
FL EEPL P+DMW+CPQCKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNF
Sbjct: 792 FLREEPLVPEDMWFCPQCKEQRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNF 851
Query: 832 PILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
PI +LDL+ Y+ K + S +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 852 PIHDLDLTNYVAHKNNSRSQIYELYALTNHYGGMGSGHYTAHIKL 896
>gi|359495412|ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
vinifera]
Length = 1056
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/885 (48%), Positives = 571/885 (64%), Gaps = 34/885 (3%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
+P+EER ++D ++ KEG+ ++LI+ RW++ W YV D+ + ++S S H +
Sbjct: 16 SPEEERLAIRDFVISAEAHTKEGDTFYLITQRWWQQWLEYVNQDQANNIDVSSLSEHCDS 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
VSS +RP IDNSD+I + +E+ L EG+DY+L+PQ+VW +L+ WY GG
Sbjct: 76 VSSSDVKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILLPQEVWNQLYAWYGGG 135
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P LPRK+I+ G+ VEV+ L L+L+ + + IR+SKK + +L+ + C++ +
Sbjct: 136 PTLPRKVINSGLSQTGLSVEVYPLRLQLVVVPKGAHSTIRISKKETIGELHRRACEIFDL 195
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM---------- 249
E+ IWDY+ R + ++ D+TLDDA +Q DQD+L+EV + S
Sbjct: 196 NMEQVCIWDYYG-HRKHALMNDMDKTLDDANIQTDQDVLVEVHSNGSSSAFGGCMSSVQE 254
Query: 250 -DSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
S + V +EPS+SSL+IAGG + S G + + S ++D Y
Sbjct: 255 NGSADKETMSVLVEPSKSSLSIAGGLSASKGVSRSCSSELSQSQNLTSPVRELDSTYGVS 314
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ +G GGL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GEL
Sbjct: 315 GVSTRGATGGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHKEINWQNPLGMVGEL 374
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFGDLLRKLW+ GR VAPR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 375 ALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 434
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC+K+S+TF
Sbjct: 435 VKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKISVTF 494
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPL ST+TRTMTVTVF +GS LP TVT+ K G C+DLI ALS AC +K +
Sbjct: 495 DPFMYLSLPLQSTITRTMTVTVFTCDGSALPSACTVTVPKQGRCRDLIQALSGACSVKHN 554
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E LLLAE+ NH I RF E+P L+S+IKDD+H+ AY+ + I L++++R +E+
Sbjct: 555 EKLLLAEIRNHLIDRFLEDPLILLSTIKDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIG 614
Query: 609 DYLKGSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRT---------------- 651
+ K K +G PLV+ + ++ ++ DI V +LSP+ RT
Sbjct: 615 NAQKSFGWKPYGTPLVSPISCDDVITRGDIQSIVYTMLSPMLRTERQGHTDISETSISVA 674
Query: 652 YSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPI 711
S F + +L + S +T L L + + + D + KPI
Sbjct: 675 ASDPSCDITTSEAFTDSIESDLKDMDGNSYKTVTLSKLPLQLVDENNACIDLSVGEEKPI 734
Query: 712 QKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
+ S I V +DW+ E YD Y+++LP V K G KK R E +SL++CL+A
Sbjct: 735 KLSS---SSMSILVFVDWSHKFLEKYDTHYLENLPEVFKYGPVTKKARTEPLSLYTCLEA 791
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
FL EEPL P+DMW+CPQCKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNF
Sbjct: 792 FLREEPLVPEDMWFCPQCKEQRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNF 851
Query: 832 PILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
PI +LDL+ Y+ K + S +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 852 PIHDLDLTNYVAHKNNSRSQIYELYALTNHYGGMGSGHYTAHIKL 896
>gi|357509209|ref|XP_003624893.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355499908|gb|AES81111.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 912
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/866 (48%), Positives = 574/866 (66%), Gaps = 25/866 (2%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE--PSIDNISFDSPHM 78
+PDEER +++D+ S KEG+ +F+I+ RW++ W YV D+ PS D SF H
Sbjct: 15 SPDEERIMIRDIALSSQTTPKEGDTFFIITQRWWQHWIEYVNQDQANPSYDGSSFPE-HS 73
Query: 79 NGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK 138
+ VSS +RP IDN D+I N +E+ L EG+DYVL+P++VW++LF WY
Sbjct: 74 DLVSSSAIKRPAGIDNYDLIDNTGSEDSSTGIEIHDTLLEGRDYVLLPREVWDQLFKWYG 133
Query: 139 GGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLR 197
GGP L RK+IS G+ E VEV+ L L+L+ N ++ IR+SKK + QL+++ C++
Sbjct: 134 GGPTLERKVISSGLSQTEFAVEVYPLRLQLLVLTRNVRSTIRISKKETIGQLHKRACEIF 193
Query: 198 GIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGN--- 254
+ ++ RIWDY+ R + ++ D+TLDD LQMDQDIL+EV V+N S G+
Sbjct: 194 DLLLDQVRIWDYYG-HRKHALMNDMDKTLDDVNLQMDQDILVEV-VNNTSSAQENGSVHR 251
Query: 255 DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG 314
+ V +EP++SS++ AGG + S G + G Y S D ++ Y + +G
Sbjct: 252 EANSVLVEPTKSSVSTAGGLSTSKGASRGNNVEYYSSQKLNSPVRDSENPYGTLGVTTRG 311
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGD 374
GGL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GELALAFG+
Sbjct: 312 SFGGLIGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINFQNPLGMVGELALAFGE 371
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LLRKLW+ GR +APR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY
Sbjct: 372 LLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPY 431
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
I+ +D+ GRPDEEVA+E W NH +RNDS+IVDV QGQYKSTLVCPVC+KVS+TFDPFMYL
Sbjct: 432 IKSRDADGRPDEEVADEYWANHISRNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYL 491
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
+LPL ST RTMTVTVF + LP P TVT+ K G C+DLI ALS +C LK +E ++L
Sbjct: 492 SLPLQSTTNRTMTVTVFSCDSITLPSPCTVTVPKQGRCRDLIQALSNSCSLKHNERIVLV 551
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGS 614
E+ NH I R+FE+P +L+SSIKDD+ + AY+ + L++++R +E+S SD S
Sbjct: 552 EIRNHLIHRYFEDPLQLLSSIKDDDRLAAYKITKMDKNTKYLQLIHRRREQS-SDSHTIS 610
Query: 615 ERKLFGAPLVTYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVI--- 670
K +G P+V+ + ++ ++ DI + V+++LSPL +A+ E + I
Sbjct: 611 GWKPYGTPIVSLISSDDKITRGDIQVMVNRILSPLLLKGDNAQQAASAETNVVSNSINKD 670
Query: 671 DELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWT 730
D +S + + L D LS+ +E++ P + V +DW+
Sbjct: 671 DTVSKATHLPTLPLLLVD--DNNACIDLSMGEEKVVKLSP--------SSARVLVYIDWS 720
Query: 731 DDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
+ E YD ++ LP V K G KK R E +SL++CL+AFL EEPL P+DMWYCP+CK
Sbjct: 721 QKLLEKYDTRPLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCK 780
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGES 849
E RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI + DL+ Y+ +K +
Sbjct: 781 ERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYIANKNNSRR 840
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAKV 875
VY+L+A++NHYG +G GHYTA+ K+
Sbjct: 841 QVYELYALTNHYGSMGSGHYTAHIKL 866
>gi|255578843|ref|XP_002530276.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223530208|gb|EEF32116.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 942
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/874 (48%), Positives = 580/874 (66%), Gaps = 23/874 (2%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNI-SFDSPHMN 79
TP+EER +++D+ ++ + KEG+ ++LI+ RW++ W YV ++P+ N S + + +
Sbjct: 17 TPEEERVLIRDIAIAAESNSKEGDYFYLITQRWWQHWIEYVNHEQPNTANDGSSSTEYCD 76
Query: 80 GVSSKRAERPGPIDNSDIIQNGNG--SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
V S + +P IDNSD+I + S +EV +L EG+DYVL+PQ+VW++L+ WY
Sbjct: 77 LVGSSK--KPASIDNSDLIYDATTIDDSHVAGIEVHDSLLEGRDYVLLPQEVWKQLYSWY 134
Query: 138 KGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
GGP L RK+I G+ E VEV+ L L+L+ ++ IR+SKK + QL+++ C++
Sbjct: 135 GGGPTLARKVICSGLSRTELAVEVYPLRLQLLVMPKGDRSTIRISKKETIGQLHKRACEI 194
Query: 197 RGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD-NGISMDSTGN- 254
+ E+ RIWDY+ QR + ++ D+TLDDA +QMDQDIL+EV + NG +++ N
Sbjct: 195 FDLNSEQLRIWDYYG-QRKHALMNDMDKTLDDANIQMDQDILVEVLNNVNGTALNGCMNS 253
Query: 255 --DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
D I S L+IAGG + S G + G + S ++D+ Y + +
Sbjct: 254 ILDKGSTEIYSEESYLSIAGGLSASKGGSRSCIAEVPQGQNLISPGGELDNTYGATGVST 313
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAF 372
+G GGL GLQNLGNTCFMNSA+QCLVHTP+ +YF DY EIN +NPLGM GELA+AF
Sbjct: 314 RGSSGGLTGLQNLGNTCFMNSAIQCLVHTPEFVKYFREDYHQEINWQNPLGMVGELAIAF 373
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G+LLRKLW+ GRA V PR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK K
Sbjct: 374 GELLRKLWAPGRAPVPPRQFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHK 433
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
PYI+ KD+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC+KVS+TFDPFM
Sbjct: 434 PYIKSKDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFM 493
Query: 493 YLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLL 552
YL+LPL ST TR++TVT+F +GS LP P TVT+ K G C+DLI ALS +C LK +E L
Sbjct: 494 YLSLPLQSTTTRSITVTIFTGDGSTLPFPCTVTVPKQGRCRDLIHALSNSCSLKNNEDLQ 553
Query: 553 LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLK 612
LAEV NH RF E+P +S+IKDD+H+ AY+ + K+ L +++R Q++ +D
Sbjct: 554 LAEVRNHLFQRFLEDPLISLSTIKDDDHLAAYKIPKSSKKKLILRLIHRHQDRETNDTQT 613
Query: 613 GSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVID 671
+ K G PL++ + ++ ++ D+ V K+LSP R S + ++ L D
Sbjct: 614 ATRWKPCGIPLLSSIPCDDVITRGDVQTVVHKMLSPFLRA-ESLRHDDIADSNTLVSASD 672
Query: 672 ELSNSHNES----VETAELEDLCSRELSFQLSLTDERISSCK--PIQKDSILK---PGKH 722
E +S E+ V + + L + +C + ++ +K
Sbjct: 673 ECHDSSGEASTDPVSDKDSSSSKALMLLKLPLQLVDESDACIDLSVGEEKAIKLSSSTTS 732
Query: 723 IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
I V LDW+ ++ + YD +Y+++LP V K G KK R E +SL++CL+AFL EEPL P+D
Sbjct: 733 IVVYLDWSQELLKKYDMNYMENLPEVLKYGPINKKARTEPLSLYTCLEAFLREEPLVPED 792
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
MWYCPQCKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI +LDL+ Y+
Sbjct: 793 MWYCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTSYV 852
Query: 843 KSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+K+ +Y+L+A++NHYGG+G GHYTA K+
Sbjct: 853 ANKNSIRRQLYELYALTNHYGGMGSGHYTARIKL 886
>gi|18405549|ref|NP_565944.1| ubiquitin carboxyl-terminal hydrolase 5 [Arabidopsis thaliana]
gi|62901125|sp|O22207.2|UBP5_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; AltName:
Full=Deubiquitinating enzyme 5; Short=AtUBP5; AltName:
Full=Ubiquitin thioesterase 5; AltName:
Full=Ubiquitin-specific-processing protease 5
gi|6648604|gb|AAF21246.1|AF048705_1 ubiquitin-specific protease [Arabidopsis thaliana]
gi|20196935|gb|AAB86453.2| ubiquitin-specific protease 5 (UBP5), putative [Arabidopsis
thaliana]
gi|20466470|gb|AAM20552.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|23198184|gb|AAN15619.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330254806|gb|AEC09900.1| ubiquitin carboxyl-terminal hydrolase 5 [Arabidopsis thaliana]
Length = 924
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/879 (48%), Positives = 569/879 (64%), Gaps = 37/879 (4%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP-SIDNISFDSPHMN 79
+P+EER ++D+ ++ + KEG+ ++LI+ RW++ W YV D+P + ++ S S H +
Sbjct: 16 SPEEERVFIRDIAIAAEANSKEGDTFYLITQRWWQEWIEYVNQDQPCNTNDGSSLSEHCD 75
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
S ++P IDNSD+I + + + E+ L+EG+DYVL+PQ+VW +L WY G
Sbjct: 76 SPGSSTLKKPSRIDNSDLIYDSSLEDPSNTSEIIETLQEGRDYVLLPQEVWNQLRSWYGG 135
Query: 140 GPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRG 198
GP L R++IS G+ E VEV+ L L+L+ + + IR+SKK + R+L+ + C++
Sbjct: 136 GPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFD 195
Query: 199 IEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------SMDS 251
++ E RIWDY+ Q+ + D+ D+TLDDA LQMDQDIL+EV NG S
Sbjct: 196 LDSEHVRIWDYYGHQKYSLMNDL-DKTLDDANLQMDQDILVEVLDINGTLSSAHIQSAQE 254
Query: 252 TG---NDLALVPIEPSRSSLTIAGGPALS-NGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
G D + IEPS+SSL AGG + S N TG +F D+ Y S
Sbjct: 255 NGLVDGDSTSILIEPSKSSLAAAGGFSSSRNAFRTG-------SVEVSQSF---DNTYSS 304
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGE 367
+G GL GL NLGNTCFMNSA+QCLVHTP+ A YF DY EIN +NPLGM GE
Sbjct: 305 TGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGE 364
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
LALAFGDLLRKLW+ GR +APR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN
Sbjct: 365 LALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 424
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
RVK KPYI +D+ GRPDEEVA+E WKNH ARNDS+IVDV QGQYKSTLVCP+C+KVS+T
Sbjct: 425 RVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVT 484
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPFMYL+LPL TR +TVTVF + + LP TV + K G C+DLI AL+ AC LK
Sbjct: 485 FDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDLIQALTNACSLKQ 544
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E L LAE+ N+ I R FE+P +SSIKDD+H+ AY+ + L +V R +++ A
Sbjct: 545 SEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSKSSENTTLLRLVLRRRDQKA 604
Query: 608 SDYLKGSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
+ + K G PL++ + L+ I V +LSP RR S K G + +
Sbjct: 605 GERESTVQLKPCGTPLLSSASCGDALTKGKIHCLVQNMLSPFRREESVGKK--GNSDSSI 662
Query: 667 PEVIDELSNSHNESVETAELE--------DLCSRELSFQLSLTDERISSCKPIQKDSILK 718
PE N+ E + L+ DL + +LS QL D + + + +++
Sbjct: 663 PERRSARFNNTEEEDKVGGLKKAKKSNSSDLGASKLSLQLIDEDNKTINLPDNEAEAMKL 722
Query: 719 PGKH-IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
P + + LDWT ++ +YD + ++ LP V K G T KK R E +SL++CL+AFL EEP
Sbjct: 723 PSSATVTIYLDWTPELSGMYDITCLESLPEVLKYGPTTKKARSEPLSLYACLEAFLREEP 782
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLD 837
L PD+MW+CPQC E RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI +LD
Sbjct: 783 LVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLD 842
Query: 838 LSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAKV 875
L+KY+ +K+ + +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 843 LTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKL 881
>gi|297827733|ref|XP_002881749.1| ubiquitin-specific protease 5 [Arabidopsis lyrata subsp. lyrata]
gi|297327588|gb|EFH58008.1| ubiquitin-specific protease 5 [Arabidopsis lyrata subsp. lyrata]
Length = 924
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/879 (47%), Positives = 567/879 (64%), Gaps = 37/879 (4%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP-SIDNISFDSPHMN 79
+P+EER ++D+ ++ + KEG+ ++LI+ RW++ W YV D+P + ++ S S H +
Sbjct: 16 SPEEERVFIRDIAIAAEANSKEGDTFYLITQRWWQDWIEYVNQDQPCNTNDGSSLSEHCD 75
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
S ++P IDNSD+I + + + E+ L+EG+DYVL+PQ+VW +L WY G
Sbjct: 76 SPGSSTLKKPSRIDNSDLIYDSSLEDPSNTSEIIETLQEGRDYVLLPQEVWNQLRSWYGG 135
Query: 140 GPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRG 198
GP L R++IS G+ E VEV+ L L+L+ + + IR+SKK + R+L+ + C++
Sbjct: 136 GPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSDHSSIRISKKETIRELHRRACEIFD 195
Query: 199 IEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------SMDS 251
+ E RIWDY+ Q+ + D+ D+TLDDA LQMDQDIL+EV NG S
Sbjct: 196 LNSEHVRIWDYYGHQKYSLMNDL-DKTLDDANLQMDQDILVEVLDINGTLSSAHIQSAQE 254
Query: 252 TG---NDLALVPIEPSRSSLTIAGGPALS-NGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
G D + IEPS+SSL AGG + S N TG + SF ST Y S
Sbjct: 255 NGLVDEDSTSILIEPSKSSLAAAGGFSSSRNAFRTG---SVEVSQSFDST-------YSS 304
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGE 367
+G GL GL NLGNTCFMNSA+QCLVHTP+ A YF DY EIN +NPLGM GE
Sbjct: 305 TGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGE 364
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
LALAFGDLLRKLW+ GR +APR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN
Sbjct: 365 LALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 424
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
RVK KPYI +D+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCP+C+KVS+T
Sbjct: 425 RVKHKPYINSRDADGRPDEEVADEFWANHIARNDSIIVDVCQGQYKSTLVCPICNKVSVT 484
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPFMYL+LPL TR +TVTVF + + LP TV + K G C+DLI AL++AC LK
Sbjct: 485 FDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDLIQALTSACSLKQ 544
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E L LAE+ N+ I R FE+P +S+IKDD+H+ AY+ + L +V R +++ A
Sbjct: 545 SEELKLAEIRNNFIHRLFEDPLIPLSTIKDDDHLAAYKLSKSSENTTLLRLVLRRRDQKA 604
Query: 608 SDYLKGSERKLFGAPLVTYLEE-EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
+ + K G PL++ + L+ I + +LSP RR S K G + +
Sbjct: 605 GERESTVQLKPCGTPLLSSASRGDALTKGKIHCLIQNMLSPFRREESVGKR--GNSDSSI 662
Query: 667 PEVIDELSNSHNES--------VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILK 718
PE N+ E + + +L + +LS QL + + + + ++I
Sbjct: 663 PERRSARFNNSEEEDKVDGLKKAKKSNSSELGASKLSLQLIDENNKTINLPDDEAEAIKL 722
Query: 719 PGKH-IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
P + + LDWT ++ +YD + ++ LP V K G KK R E +SL++CL+AFL EEP
Sbjct: 723 PSSATVTIYLDWTPELSGMYDITCLESLPEVLKYGPATKKARSEPLSLYACLEAFLREEP 782
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLD 837
L PD+MW+CPQC E RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFP+ +LD
Sbjct: 783 LVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPVHDLD 842
Query: 838 LSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAKV 875
L+KY+ +K+ + +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 843 LTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKL 881
>gi|356571884|ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine
max]
Length = 938
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/891 (46%), Positives = 583/891 (65%), Gaps = 49/891 (5%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFD----SP 76
+PDEER +++D+ + + KEG+ +FLI+ RW++ W YV ++ N S+D S
Sbjct: 15 SPDEERILIRDIALTAQANSKEGDTFFLITQRWWQHWIEYVNQEQ---TNTSYDASSLSE 71
Query: 77 HMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCW 136
H + +S +RP IDNSD+I + G +E+ L EG+DYVL+PQ+VW +LF W
Sbjct: 72 HCDLANSSVLKRPAGIDNSDLIDDAVSEDTGMGIEIHDTLLEGRDYVLLPQEVWNQLFRW 131
Query: 137 YKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK 195
Y GGP L RK+IS G+ E VEV+ L L+L+ N + IR+SKK + QL+ K C+
Sbjct: 132 YGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDRFPIRISKKETIGQLHRKACE 191
Query: 196 LRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV--QVDNGISMDSTG 253
+ ++ ++ IWDY+ + R + ++ D+TLDDA LQMDQDIL+EV +N G
Sbjct: 192 IFDLQPDQVCIWDYYAR-RKHALMNDMDKTLDDANLQMDQDILVEVINNTNNTSFAQENG 250
Query: 254 N---DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNT 310
+ ++ +EPS+SSL+IAGG + S G + G+ + + S D+++ Y +
Sbjct: 251 SAQREMNSALVEPSKSSLSIAGGLSASRGASRGHNMDLSSSQNLNSPVRDVENPYGTSGV 310
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELAL 370
+G GGL GL NLGNTC+MNSA+QCLVHTP+ A+YF DY EIN +NPLGM GELAL
Sbjct: 311 TTRGSFGGLTGLLNLGNTCYMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGELAL 370
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
AFG+LLRKLW+ GR +APR FK KL RFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK
Sbjct: 371 AFGELLRKLWAPGRTPIAPRPFKAKLVRFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVK 430
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC+KVS+TFDP
Sbjct: 431 HKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDP 490
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
FMYL+LPL T RTMTVTVF +G+ LP TVT+ K G C+DLI ALS AC LK +E
Sbjct: 491 FMYLSLPLQPTTNRTMTVTVFACDGAALPSACTVTVPKQGRCRDLIQALSNACSLKHNER 550
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDY 610
L+L E+ NH I R+FE+P +L+S+IKDD+ + AY+ + L++++R +E+S+ +
Sbjct: 551 LVLVEIRNHLIHRYFEDPLQLLSNIKDDDRLAAYKVPKIDKNTKYLQLIHRRREQSSDSH 610
Query: 611 LKGSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
+ S K +G P+V+ + ++ ++ DI + V+++LSPL R + + E
Sbjct: 611 II-SGWKPYGTPIVSLISCDDTVTRGDIQVIVNRMLSPLLRKGINVEQATTSETSIPKAT 669
Query: 670 IDELS-NSHNESVETAELEDLCSRELS-----------------------FQLSLTDERI 705
D+ S NS +++ + + +++ + LS+ +E++
Sbjct: 670 SDQCSFNSSDDACAANMVSNSVNKDTTNSKAPPVPLPTLPLLLVDDNNACIDLSMGEEKV 729
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
P+ I V +DW+ + E YD ++ LP V K G KK R E +SL
Sbjct: 730 VKLSPL--------SPKILVYIDWSQKLLEKYDTHPLETLPEVLKYGPVTKKARTEPLSL 781
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
++CL+AFL EEPL P+DMWYCP+CKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL
Sbjct: 782 YTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKL 841
Query: 826 DTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+TFVNFPI + DL+ Y+ +K+ +Y+L+A++NHYG +G GHYTA+ K+
Sbjct: 842 ETFVNFPIHDFDLTNYIANKNNTRRQLYELYALTNHYGSMGSGHYTAHIKL 892
>gi|356503356|ref|XP_003520476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine
max]
Length = 938
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/895 (46%), Positives = 578/895 (64%), Gaps = 57/895 (6%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFD----SP 76
+PDEER +++D+ S + KEG+ +FLI+ RW++ W YV D+ N S+D S
Sbjct: 15 SPDEERILIRDIALASQANSKEGDTFFLITQRWWQHWIEYVNQDQT---NTSYDASSLSE 71
Query: 77 HMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCW 136
+ +S +RP IDNSD+I + G +E+ L EG+DYVL+PQ+VW +LF W
Sbjct: 72 QFDLANSSALKRPAGIDNSDLIDDAVLEDSGTGIEIHDTLLEGRDYVLLPQEVWNQLFRW 131
Query: 137 YKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK 195
Y GGP L RK+IS G+ E VEV+ L L+L+ N + IR+SKK + QL+ K C+
Sbjct: 132 YGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDRFPIRISKKETIGQLHRKACE 191
Query: 196 LRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV---------QVDNG 246
+ ++ ++ IWDY+ ++R D+ D+TLDDA LQMDQDIL+EV +NG
Sbjct: 192 IFDLQPDQVCIWDYYARRRHALMNDM-DKTLDDANLQMDQDILVEVINNTNNTSFAQENG 250
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
+ + L +EPS+SSL+IAGG + S G + GY + + S D+++ Y
Sbjct: 251 SAQREANSAL----VEPSKSSLSIAGGLSASRGASKGYNTDLSSSQNLNSPVRDVENPYG 306
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHG 366
+ + GL GL NLGNTC+MNSA+QCLVHTP+ A+YF DY EIN +NPLGM G
Sbjct: 307 TSGVTTRSSFLGLTGLLNLGNTCYMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVG 366
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
ELALAFG+LLRKLW+ GR +APR FK KL RFAPQFSG+NQHDSQELLAFLLDGLHEDL
Sbjct: 367 ELALAFGELLRKLWAPGRTPIAPRPFKAKLVRFAPQFSGHNQHDSQELLAFLLDGLHEDL 426
Query: 427 NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
NRVK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC+KVS+
Sbjct: 427 NRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSV 486
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDPFMYL+LPL T RTMTVTVF +G+ LP TVT+ K G C+DLI ALS AC LK
Sbjct: 487 TFDPFMYLSLPLQPTTNRTMTVTVFACDGASLPFSCTVTVPKQGRCRDLIQALSNACSLK 546
Query: 547 IDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKS 606
+E L+L E+ NH I R+FE+P +L+S+IKDD+ + AY+ + L++++R +E+S
Sbjct: 547 HNERLVLVEIRNHLIHRYFEDPLQLLSNIKDDDRLAAYKVPKIDKNTKYLQLIHRQREQS 606
Query: 607 ASDYLKGSERKLFGAPLVTYLE-EEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGF 665
+ ++ S K +G P+V+ + ++ ++ DI + V+ +LSPL R + + E
Sbjct: 607 SDSHII-SGWKPYGTPIVSLISCDDTVTRGDIQVIVNCMLSPLLRKGINVEQATTSETSI 665
Query: 666 LPEVIDELS-NSHNESVETAELEDLCSRELS-----------------------FQLSLT 701
D S NS +++ + + +++ + LS+
Sbjct: 666 PKATSDHCSFNSDDDACAPNMMSNSVNKDTTNSKAPPMPLPTLPLLLVDDNNACIDLSMG 725
Query: 702 DERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQE 761
+E++ P+ I V +DW+ + E YD ++ LP V K G KK R E
Sbjct: 726 EEKVVKLSPL--------SPKILVYIDWSQKLLEKYDTHTLETLPEVLKYGPVTKKARTE 777
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
+SL++CL+AFL EEPL P+DMWYCP+CKE RQA+KKLDLW LP+VLV HLKRFSYSR +
Sbjct: 778 PLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSM 837
Query: 822 KNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
K+KL+TFVNFPI + DL+ Y+ +K + +Y+L+A++NHYG +G GHYTA+ K+
Sbjct: 838 KHKLETFVNFPIHDFDLTNYIANKNNSRRQLYELYALTNHYGSMGSGHYTAHIKL 892
>gi|449459070|ref|XP_004147269.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Cucumis
sativus]
Length = 940
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/906 (46%), Positives = 580/906 (64%), Gaps = 57/906 (6%)
Query: 6 SSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE 65
+ V M + GS TP+EER +++D+ ++ + KEG++++LI+ RW++ W YV D+
Sbjct: 2 AEVSMCSSSGST-ELTPEEERIMIRDIALAAEANTKEGDIFYLITQRWWQHWIEYVNQDQ 60
Query: 66 P--SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYV 123
P + D SF + + S +RP IDNSD+I + +E+ L EG+DYV
Sbjct: 61 PINTNDGSSFAEIY-DSFGSSMLKRPASIDNSDLIYDAASEDSSAGIEIHDTLLEGRDYV 119
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSK 182
L+PQ+VW +L WY GGP L RK+IS G+ E VEV+ L L+L++ ++ IR+SK
Sbjct: 120 LLPQEVWNQLCLWYGGGPKLARKVISAGLSQTELTVEVYPLRLQLLEVPKGDRSTIRISK 179
Query: 183 KASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV- 241
K + +L+ + C++ + E+ IWDY+ R + ++ D+TLDDA +QMDQDIL+E+
Sbjct: 180 KETIGELHRRACEIFDLNLEQVCIWDYYG-HRKHALMNDMDKTLDDANIQMDQDILVEIL 238
Query: 242 --------------QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFN 287
DNG +T + + +E S+S+L AGG T +
Sbjct: 239 NHGNHNALGGCTSYVQDNG----TTDKEATSIHLEASKSNLISAGGMPNKGASKTEVVQS 294
Query: 288 QYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
Q P SS ++D+ Y + +G GL GL NLGNTCFMNSA+QCLVHTP+ A+Y
Sbjct: 295 QNPTSSIK----ELDNAYGQSGVSTRGSSCGLTGLLNLGNTCFMNSAIQCLVHTPEFARY 350
Query: 348 FLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYN 407
F DY EIN +NPLGM GELA+AFGDLLRKLW+ GR +VAPR FK KLARFAPQFSGYN
Sbjct: 351 FREDYHQEINWQNPLGMVGELAMAFGDLLRKLWAPGRTSVAPRPFKAKLARFAPQFSGYN 410
Query: 408 QHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDV 467
QHDSQELLAFLLDGLHEDLNRVK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV
Sbjct: 411 QHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDV 470
Query: 468 FQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
QGQYKSTLVCPVC+KVS+TFDPFMYL+LPL ST TRTMTVTVF ++GS P TVT+
Sbjct: 471 CQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTTRTMTVTVFTSDGSKRPSTLTVTVP 530
Query: 528 KHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
K G C+DLI AL+ C L+ E LLLAEV +H + RF E+P +S+IKDD+HI AY+
Sbjct: 531 KQGRCRDLIQALNGTCSLRHSEKLLLAEVRDHLVHRFLEDPLISLSTIKDDDHIAAYKIP 590
Query: 588 RKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGAD-IDIAVSKLLS 646
+ L++V+R QE+ SD S + FG PLV+ + E D + V + LS
Sbjct: 591 KLTKNAKYLQLVHRSQEQVTSDADIMSGWRPFGTPLVSVVSCEGPVKKDYLQRIVKRALS 650
Query: 647 PLRRTYS--------SAKAHGGKE---NGFLPEVIDELSNSHNESVETAE-----LEDLC 690
PL + + S+ +H G++ + E NS + + E L+ L
Sbjct: 651 PLAKIGTLMDTDVSDSSMSHAGEDLHHHDSSAETCTSSLNSDDPKSKAMEPFKLPLQLLN 710
Query: 691 SRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK 750
+ +LS +E + L P + V +DW+ + + +D Y+++LP V K
Sbjct: 711 EENVCIELSSGEEAVK----------LPPSSSVLVYIDWSQKLLKKFDTGYLENLPEVFK 760
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+G +KK R E +SL+SCL++FL EEPL P+DMW+CPQCKE RQA+KKLDLW LP+VLV
Sbjct: 761 SGPVMKKARTEPLSLYSCLESFLREEPLVPEDMWFCPQCKERRQASKKLDLWRLPEVLVI 820
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHY 869
HLKRFSYSR +K+KL+TFVNFPI + DL+ Y+ +K + + +Y+L+A++NHYG +G GHY
Sbjct: 821 HLKRFSYSRSMKHKLETFVNFPIHDFDLTNYVANKNNSQRQLYELYALTNHYGSMGSGHY 880
Query: 870 TAYAKV 875
TA+ K+
Sbjct: 881 TAHIKL 886
>gi|218184165|gb|EEC66592.1| hypothetical protein OsI_32808 [Oryza sativa Indica Group]
Length = 788
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/787 (50%), Positives = 534/787 (67%), Gaps = 31/787 (3%)
Query: 13 NGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNIS 72
+ SCLPCT +EER +V L +++ ++K+G+L +L+S W+ +W+ YV +P ++
Sbjct: 11 HAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVGLIKPDENDAD 70
Query: 73 FDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEK 132
+ + RPG IDNS ++ SS GD+ E++R L EG DY LVPQ+VW K
Sbjct: 71 --------MLPQAPSRPGEIDNSKLVSE-ESSSIGDEPELQRTLREGDDYALVPQEVWRK 121
Query: 133 LFCWYKGGPALPRKMISEGIVNEKR-VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYE 191
L WYKGGP L R++I + V+V+ L LKL D RD+ + +IR+S+KA +LY
Sbjct: 122 LHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELYS 181
Query: 192 KVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMD- 250
VC L +EQ K IWD++ K + +++ ++T+++A L MDQ+I++E + D+ D
Sbjct: 182 LVCSLLSVEQSKIDIWDFYQKTKGKKLINL-NETVEEAQLMMDQEIIIEAKADDAWCSDL 240
Query: 251 --STGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
+ N+LAL+P+EPS SS +IAGGPA SNG ++G+ + +SF D +DGY S+
Sbjct: 241 GTRSNNELALIPLEPSTSSFSIAGGPAFSNGFSSGFGSSFSQDNSFSPLLRDAEDGY-SF 299
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ K + GL+GL NLGNTCFMNSA+Q LVHTP L +YFL DYS EINTENPLG+ GEL
Sbjct: 300 SNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGEL 359
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A AFG+LLRKLWS+GR ++APR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 360 ATAFGELLRKLWSAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 419
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK+KPYIE KD+ GRPDEE+A ECW HKARNDS+IVD FQGQYKSTLVCP C K+S+TF
Sbjct: 420 VKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQGQYKSTLVCPDCKKISVTF 479
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPLPSTVTR + VTVF G LPMP+TV + K+G C DLI +LS CCL+
Sbjct: 480 DPFMYLSLPLPSTVTRMINVTVFSGTGDALPMPYTVKVQKNGVCGDLIKSLSVMCCLQSC 539
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E LLLAEVY+H+I+R++ NP+E + +KD++ +VAYR +++EI++R ++ S
Sbjct: 540 ETLLLAEVYDHRIYRYW-NPSEPLCHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTS 598
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH-----GGKEN 663
+ + RKL G+PLVT + + ADI VS LL+P R AK H K N
Sbjct: 599 ESMFNLSRKLIGSPLVTCIPSDSTRKADIYATVSSLLAPFVR----AKVHTLDESATKLN 654
Query: 664 GFLPE----VIDELSNSHNESVETAELEDLCSRE--LSFQLSLTDERISSCKPIQKDSIL 717
P V+ + + E V T+ +++ + E L FQL LTD++ + + I DS
Sbjct: 655 SNGPSLDGIVLTDNGVTCVEDVSTSNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNG 714
Query: 718 KPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
PG +++L+DW+D HE+YD Y+ +L VV K GF KK RQEA++LFSCLDAFL +EP
Sbjct: 715 VPGSTMRLLMDWSDREHEVYDIKYMDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEP 774
Query: 778 LGPDDMW 784
LGPDDMW
Sbjct: 775 LGPDDMW 781
>gi|357152240|ref|XP_003576054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like
[Brachypodium distachyon]
Length = 930
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/873 (45%), Positives = 556/873 (63%), Gaps = 48/873 (5%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
P+EE +++D+ ++ KEG+++FLI+ RW++SW YV D + + + H +
Sbjct: 28 PEEEMALIRDITVAAESQAKEGDVFFLITNRWWQSWIDYVIQDSAGVTSNGY---HHHEF 84
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
S RPG I+N+D++ + D+E+ L EG+DY+L+PQQVWEKL WY GGP
Sbjct: 85 GSNAPRRPGAINNTDLLDDLAYEVSNMDMELHDTLVEGRDYILLPQQVWEKLHGWYGGGP 144
Query: 142 ALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIE 200
LPRK I+ G+ + +EV+ L L+L+ Q VIR+SKK +L++K C++ +
Sbjct: 145 TLPRKAINTGLSQTDLAIEVYPLRLQLLLMPKGEQAVIRISKKDIVGELHKKACEVFDLV 204
Query: 201 QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD-NGI----SMDSTG-N 254
++ IWDY+ +++ + +D ++TLDDA +QMDQDIL+EV D NGI M S N
Sbjct: 205 PDEVCIWDYYGRKKH-ALMDNLEKTLDDANIQMDQDILVEVSTDANGIFDGGCMSSIQEN 263
Query: 255 DL----ALVPIEPSRSSLT---IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
D + + + S+S L+ +A S +++G NQ P SS G D ++ +
Sbjct: 264 DFFERASSLMADASKSGLSSENLASINYASRSYSSGLPQNQCPRSSNG----DSENVPGT 319
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGE 367
+G GL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN NPLGM GE
Sbjct: 320 VGVTTRGSPSGLTGLLNLGNTCFMNSAVQCLVHTPEFARYFREDYHCEINWNNPLGMVGE 379
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
LALAFG+LLRKLWS R V+PR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLN
Sbjct: 380 LALAFGELLRKLWSPSRTPVSPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLN 439
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
RVK +PY++ D+ GR DEEVA+E W NH ARNDS+IVDV QGQYKSTLVCP+C KVS+T
Sbjct: 440 RVKHRPYLKSNDADGRSDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPICGKVSVT 499
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPFMYL+LPL TR+MTV VF +GS P P+TV++ K G C+DLI ALS+AC LK
Sbjct: 500 FDPFMYLSLPLQFASTRSMTVVVFTCDGSAPPTPYTVSVPKQGRCRDLIQALSSACSLKN 559
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
+E LL+AE+ NH++ F E+P +S+IKDD+H+ YR + + ++ V+R +E
Sbjct: 560 EEKLLIAEIRNHRVHLFLEDPVLQLSTIKDDDHLAVYRLPKLEKRASYIQFVHRREELDH 619
Query: 608 SDYLKGSERKLFGAPLVTYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
+ K +G PL+ + E ++G+ I K+L P+ R
Sbjct: 620 GNNSSSMSWKPYGVPLLAQIPRNETVTGSAIHEMGRKMLVPMLRN--------------- 664
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD-SILKPGKHIK- 724
+V + + S T S+ FQL L D+ + + Q D +I P +
Sbjct: 665 -QVAQHTAVQSSLSTRTQSYHTDGSK---FQLQLNDDSNTVIE--QTDYAIRVPQSSLAT 718
Query: 725 -VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ ++W+ + + +++++LP V K K+TR E +SL++CLDAFL EEPL P++M
Sbjct: 719 IIFVNWSKSDLKKLNTNHLENLPEVFKYAPPAKRTRGEPLSLYACLDAFLREEPLVPEEM 778
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP+CKE RQA+KKLDLW LP+VLV HLKRFS+SR K+KL+TFVNFPI +LDL+ Y+
Sbjct: 779 WYCPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKHKLETFVNFPIHDLDLTNYIA 838
Query: 844 SKD-GESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+K + +Y+L+A+SNHYG + GHYTA K+
Sbjct: 839 NKKISQRQIYELYAVSNHYGSMASGHYTANIKL 871
>gi|222615950|gb|EEE52082.1| hypothetical protein OsJ_33861 [Oryza sativa Japonica Group]
Length = 918
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/871 (45%), Positives = 551/871 (63%), Gaps = 46/871 (5%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+EER +++D+ ++ KEG+ +FLI+ RW++SW YV D + N + + H +
Sbjct: 19 EEERALIRDITVAAEAHAKEGDTFFLITHRWWQSWIDYVIQD---LANSTNNGSHHHEHG 75
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
S RPG IDN+D+I + ++E+ L EG+DY+L+PQQVWEKL WY GGP
Sbjct: 76 SNVLRRPGAIDNTDLIDDTASEVSNMEIELHDTLVEGRDYILLPQQVWEKLHGWYGGGPT 135
Query: 143 LPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQ 201
LPRK I+ G+ + +EV+ L L+L+ + Q VIR+SKK + +L++K C++ +
Sbjct: 136 LPRKAINTGLSQTDLAIEVYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEVFDLIP 195
Query: 202 EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS--TGNDLALV 259
++ IWDY+ + R S +D ++TLDDA +QMDQDIL+EV D S+D G+
Sbjct: 196 DEVCIWDYYGRTRH-SLMDNLEKTLDDANIQMDQDILVEVTTDANGSLDGGCIGSIQENE 254
Query: 260 PIEPSRSSLTI-AGGPALSNGHTTGYRFNQYPGSSFGSTFM----------DMDDGYDSY 308
+E +SL A LSN + N Y S+ S+ D+D+ + +
Sbjct: 255 YLERESTSLIADASKSGLSN---ENFASNNYTSRSYSSSLTQSQYLRSSNGDLDNMHGTS 311
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+G GL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GEL
Sbjct: 312 AMITRGSPLGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGEL 371
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFG+LLRKLW+ GR V+PR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 372 ALAFGELLRKLWAPGRTPVSPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 431
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK +PYI+ KD+ GR D+EVA+E W NH ARN+S+IVDV QGQYKSTLVCP C KVS+TF
Sbjct: 432 VKHRPYIKSKDADGRSDDEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPACGKVSVTF 491
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPL T TR+MTV VF +GS P P+TV + K G C+DLI A+S AC L+
Sbjct: 492 DPFMYLSLPLQFTSTRSMTVMVFTFDGSTPPTPYTVNVPKQGRCRDLIQAISNACSLRNG 551
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E L++AE+ NH+I R ++P +S+I DD+H+ YR + + ++ V+R +
Sbjct: 552 ERLVIAEIRNHRIHRLLDDPVVQLSTINDDDHLAVYRLPKMEKKPNYIQFVHRRDDWDNG 611
Query: 609 DYLKGSERKLFGAPLVTYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP 667
+ + + K +G PL+ + E ++G I V K+L+P+++ S + +
Sbjct: 612 NNISVTAWKPYGVPLLAQVSRNETVTGMHIHEMVRKMLAPMQKNQESQHSVQSSVST--- 668
Query: 668 EVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK--V 725
H +S + FQL L D+ ++ + D+I P + +
Sbjct: 669 ----RTQTYHTDSTK-------------FQLQLIDDSNTTIEQ-SNDTIRVPQSSLAAVI 710
Query: 726 LLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
++W+ + + ++++LP V K K+TR E +SL+SCLDAFL EEPL P+DMWY
Sbjct: 711 FVNWSKADLKKLNTHHLENLPEVFKYAPPAKRTRGEPLSLYSCLDAFLREEPLVPEDMWY 770
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS- 844
CP+CKE RQA+KKLDLW LP+VLV HLKRFS+SR K KL+TFVNFPI + DL+ Y+ +
Sbjct: 771 CPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDFDLTNYIANK 830
Query: 845 KDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
K E +Y+L+A+SNHYG + GHYTAY K+
Sbjct: 831 KSSERQIYELYAVSNHYGSMASGHYTAYIKL 861
>gi|218185716|gb|EEC68143.1| hypothetical protein OsI_36069 [Oryza sativa Indica Group]
Length = 918
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/871 (45%), Positives = 551/871 (63%), Gaps = 46/871 (5%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+EER +++D+ ++ KEG+ +FLI+ RW++SW YV D + N + + H +
Sbjct: 19 EEERALIRDITLAAEAHAKEGDTFFLITHRWWQSWIDYVIQD---LANSTNNGSHHHEHG 75
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
S RPG IDN+D+I + ++E+ L EG+DY+L+PQQVWEKL WY GGP
Sbjct: 76 SNVLRRPGAIDNTDLIDDTASEVSNMEIELHDTLVEGRDYILLPQQVWEKLHGWYGGGPT 135
Query: 143 LPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQ 201
LPRK I+ G+ + +EV+ L L+L+ + Q VIR+SKK + +L++K C++ +
Sbjct: 136 LPRKAINTGLSQTDLAIEVYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEVFDLIP 195
Query: 202 EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS--TGNDLALV 259
++ IWDY+ + R S +D ++TLDDA +QMDQDIL+EV D S+D G+
Sbjct: 196 DEVCIWDYYGRTRH-SLMDNLEKTLDDANIQMDQDILVEVTTDANGSLDGGCIGSIQENE 254
Query: 260 PIEPSRSSLTI-AGGPALSNGHTTGYRFNQYPGSSFGSTFM----------DMDDGYDSY 308
+E +SL A LSN + N Y S+ S+ D+D+ + +
Sbjct: 255 YLERESTSLIADASKSGLSN---ENFASNNYTSRSYSSSLTQSQYLRSSNGDLDNMHGTS 311
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+G GL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GEL
Sbjct: 312 AMITRGSPLGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLGMVGEL 371
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFG+LLRKLW+ GR V+PR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 372 ALAFGELLRKLWAPGRTPVSPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 431
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK +PYI+ KD+ GR D+EVA+E W NH ARN+S+IVDV QGQYKSTLVCP C KVS+TF
Sbjct: 432 VKHRPYIKSKDADGRSDDEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPACGKVSVTF 491
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPL T TR+MTV VF +GS P P+TV + K G C+DLI A+S AC L+
Sbjct: 492 DPFMYLSLPLQFTSTRSMTVMVFTFDGSTPPTPYTVNVPKQGRCRDLIQAISNACSLRNG 551
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E L++AE+ NH+I R ++P +S+I DD+H+ YR + + ++ V+R +
Sbjct: 552 ERLVIAEIRNHRIHRLLDDPVVQLSTINDDDHLAVYRLPKMEKKPNYIQFVHRRDDWDNG 611
Query: 609 DYLKGSERKLFGAPLVTYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP 667
+ + + K +G PL+ + E ++G I V K+L+P+++ S + +
Sbjct: 612 NNISVTAWKPYGVPLLAQVSRNEAVTGMHIHEMVRKMLAPMQKNQESQHSVQSSVST--- 668
Query: 668 EVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK--V 725
H +S + FQL L D+ ++ + D+I P + +
Sbjct: 669 ----RTQTYHTDSTK-------------FQLQLIDDSNTTIEQ-SNDTIRVPQSSLAAVI 710
Query: 726 LLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
++W+ + + ++++LP V K K+TR E +SL+SCLDAFL EEPL P+DMWY
Sbjct: 711 FVNWSKADLKKLNTHHLENLPEVFKYAPPAKRTRGEPLSLYSCLDAFLREEPLVPEDMWY 770
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS- 844
CP+CKE RQA+KKLDLW LP+VLV HLKRFS+SR K KL+TFVNFPI + DL+ Y+ +
Sbjct: 771 CPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDFDLTNYIANK 830
Query: 845 KDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
K E +Y+L+A+SNHYG + GHYTAY K+
Sbjct: 831 KSSERQIYELYAVSNHYGSMASGHYTAYIKL 861
>gi|22655793|gb|AAN04210.1| Putative ubiquitin carboxyl terminal hydrolase [Oryza sativa
Japonica Group]
Length = 890
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/915 (44%), Positives = 552/915 (60%), Gaps = 145/915 (15%)
Query: 13 NGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNIS 72
+ SCLPCT +EER +V L +++ ++K+G+L +L+S W+ +W+ YV +P ++
Sbjct: 11 HAASCLPCTAEEERDLVVALTREAEENVKDGDLRYLVSHSWWLNWQSYVGLIKPDENDAD 70
Query: 73 FDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEK 132
+ + RPG IDNS ++ SS GD+ E++R L EG DY LVPQ+VW K
Sbjct: 71 --------MLPQAPSRPGEIDNSKLVSE-ESSSIGDEPELQRTLREGDDYALVPQEVWRK 121
Query: 133 LFCWYKGGPALPRKMISEGIVNEKR-VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYE 191
L WYKGGP L R++I + V+V+ L LKL D RD+ + +IR+S+KA +LY
Sbjct: 122 LHEWYKGGPELSRRVICSSPTSRSYIVDVYPLRLKLFDGRDSLERIIRISRKAKVSELYS 181
Query: 192 KVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMD- 250
VC L +EQ K IWD++ K + +++ ++T+++A L MDQ+I++E + D+ D
Sbjct: 182 LVCSLLSVEQSKIDIWDFYQKTKGKKLINL-NETVEEAQLMMDQEIIIEAKADDAWCSDL 240
Query: 251 --STGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
+ N+LAL+P+EPS SS +IAGGPA SNG ++G+ + +SF D +DGY S+
Sbjct: 241 GTRSNNELALIPLEPSTSSFSIAGGPAFSNGFSSGFGSSFSQDNSFSPLLRDAEDGY-SF 299
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ K + GL+GL NLGNTCFMNSA+Q LVHTP L +YFL DYS EINTENPLG+
Sbjct: 300 SNGTKDDIHGLSGLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGL---- 355
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
QELLAFLLDGLHEDLNR
Sbjct: 356 -------------------------------------------QELLAFLLDGLHEDLNR 372
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ------------------- 469
VK+KPYIE KD+ GRPDEE+A ECW HKARNDS+IVD FQ
Sbjct: 373 VKKKPYIEAKDADGRPDEELAEECWNYHKARNDSIIVDKFQVYVCSQLFTTHQYTFSIAC 432
Query: 470 -----------------GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
GQYKSTLVCP C K+S+TFDPFMYL+LPLPSTVTR + VTVF
Sbjct: 433 CFCNDYLLETRPERLGQGQYKSTLVCPDCKKISVTFDPFMYLSLPLPSTVTRMINVTVFS 492
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
G LPMP+TV +VY+H+I+R++ NP+E +
Sbjct: 493 GTGDALPMPYTV------------------------------KVYDHRIYRYW-NPSEPL 521
Query: 573 SSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHL 632
+KD++ +VAYR +++EI++R ++ S+ + RKL G+PLVT + +
Sbjct: 522 CHVKDEDKLVAYRLPVGSENLLRVEILHRVVDRYTSESMFNLSRKLIGSPLVTCIPSDST 581
Query: 633 SGADIDIAVSKLLSPLRRTYSSAKAH-----GGKENGFLPE----VIDELSNSHNESVET 683
ADI VS LL+P R AK H K N P V+ + + E V T
Sbjct: 582 RKADIYATVSSLLAPFVR----AKVHTLDESATKLNSNGPSLDGIVLTDNGVTCEEDVST 637
Query: 684 AELEDLCSRE--LSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSY 741
+ +++ + E L FQL LTD++ + + I DS PG +++L+DW+D HE+YD Y
Sbjct: 638 SNVDEEAADEEVLPFQLWLTDDKANKREHIDADSNGVPGSTMRLLMDWSDREHEVYDIKY 697
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
+ +L VV K GF KK RQEA++LFSCLDAFL +EPLGPDDMWYCP+C EH+QA+KKLDL
Sbjct: 698 MDELSVVFKPGFMSKKNRQEAVNLFSCLDAFLKDEPLGPDDMWYCPRCTEHKQASKKLDL 757
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNH 860
W LP++LV HLKRFSYSR++KNKLDTFVNFPI +LD+S+Y S+ + +Y+L+A+ NH
Sbjct: 758 WRLPEILVVHLKRFSYSRFMKNKLDTFVNFPIHDLDMSRYANHSRGDQPPIYELYAVINH 817
Query: 861 YGGLGGGHYTAYAKV 875
YGG+GGGHY+AYAK+
Sbjct: 818 YGGMGGGHYSAYAKL 832
>gi|255549649|ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 889
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/896 (43%), Positives = 536/896 (59%), Gaps = 85/896 (9%)
Query: 24 EERQIVQDLKN----QSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMN 79
E + +DL + Q D D + LYF + RW++ + IS +S
Sbjct: 2 ENNDVSEDLSDLTHRQPDSDNNDQRLYF-VPYRWWK---------DAQDSTISSESDGKR 51
Query: 80 GV---SSKRAERPGP------IDNSDIIQNGNGSSEGDDLEVRRNLE---EGQDYVLVPQ 127
GV + + GP I NSD++ N E + L+ N E G+DY LV
Sbjct: 52 GVLYMGTSGSSYAGPMKLINNIFNSDLVLNLR--REEESLQNGENGEVGVSGRDYALVSG 109
Query: 128 QVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTR 187
++W K W+ + + + +V+ L L+L R+ + +++SKK +
Sbjct: 110 EMWLKALKWHSDAKVASKSSKTFSAAEDDMSDVYPLQLRLSVLREVNSLGVKISKKENAT 169
Query: 188 QLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV---- 243
+L+ + CK+ ++ E RIWD F+ Q + ++ ++ ++ Q+DQ+I+LE+QV
Sbjct: 170 ELFRRACKIFSVDSEMLRIWD-FSGQTTLFFVNDKSKSPKESQRQLDQEIVLELQVYGLS 228
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
DN D +D + SS T ++SN T+ +R + + FG
Sbjct: 229 DNMKCRDGKKDDAVAQNCNGTHSSGTSLMNGSVSNTSTSFFRCDS--SALFG-------- 278
Query: 304 GYDSYNTAKKGEKG--GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
K GE G GL GLQNLGNTCFMNSA+QCL HTP L YFLGDY EIN +NP
Sbjct: 279 --------KSGEAGSLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGREINHDNP 330
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+ALAFGDLLRKLW+ G VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDG
Sbjct: 331 LGMDGEIALAFGDLLRKLWAPGATPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDG 390
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNRVK KPY+E KD GR DEEVA+E W+NH ARNDS+IVD+ QGQYKSTLVCP+C
Sbjct: 391 LHEDLNRVKSKPYVEAKDGEGRLDEEVADEYWQNHVARNDSIIVDICQGQYKSTLVCPIC 450
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
KVS+TFDPFMYL+LPLPST RTMT+TV +GS P FT+++ K+G C+DL ALS
Sbjct: 451 KKVSVTFDPFMYLSLPLPSTNIRTMTLTVVSTDGSSQPSSFTISVPKYGKCEDLTQALSK 510
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
AC L IDE LL+AEVYN++I R+ E P++ +S I+D + +VAYR ++ + +++
Sbjct: 511 ACSLGIDEMLLVAEVYNNRIIRYLEEPSDSLSLIRDGDRLVAYRLKKELDNIPLVVFMHQ 570
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR-----------R 650
E+ + S K FG PLV + ++G+DI KLLSP
Sbjct: 571 HMEEQYVHGKQTSSWKAFGIPLVGPV-HSLVNGSDIHNLYLKLLSPFHIPADDGMYSCNN 629
Query: 651 TYSSAKAH-GGKENGFL-------PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
T S+AK K+NG P +++E +NS + S EL+ + E + D
Sbjct: 630 TTSTAKEEITEKDNGCSASHGNANPSIVEEATNSSSYS----ELQFYITDEKGI---VQD 682
Query: 703 ERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA 762
+I +P+ + K VL+ WT+ E YD + LP V K+GF K+ QE+
Sbjct: 683 LKIGINEPVPVTGV---PKRFNVLVCWTEKQIEQYDTRLLSSLPEVFKSGFLAKRP-QES 738
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+SL+ CL+AFL EEPLGPDDMW+CP CK+HRQA+KKLDLW LP++LV HLKRFSY+R++K
Sbjct: 739 VSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMK 798
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
NKL+ +V+FP+ +LDLS Y+ K+G+ S+ Y L+AISNHYG +GGGHYTA+ A
Sbjct: 799 NKLEAYVDFPVDDLDLSAYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAFVHHGA 854
>gi|224145371|ref|XP_002336224.1| predicted protein [Populus trichocarpa]
gi|222832697|gb|EEE71174.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/694 (51%), Positives = 465/694 (67%), Gaps = 48/694 (6%)
Query: 223 DQTLDDAMLQMDQDILLEVQ-VDNGISMDS----------TGNDLALVPIEPSRSSLTIA 271
D+TLDDA LQMDQDIL+EV + NG ++ T D + +EPS+SSL+IA
Sbjct: 5 DKTLDDANLQMDQDILVEVHDIANGTALSRFIRSAQDNGPTVKDASSFHLEPSKSSLSIA 64
Query: 272 GGPALSNGHTTGYRF--NQYP-----GSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQN 324
GG + S G + G +Q P G + ++D+ Y + +G GGL GLQN
Sbjct: 65 GGLSASKGASRGCSAEPSQSPNLTSQGPNLTYQGRELDNAYGTSTVTTRGSSGGLIGLQN 124
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGR 384
LGNTCFMNSA+QCLVHT + A+YF DY EIN +NPLGM GELALAFG+LLR+LW+ GR
Sbjct: 125 LGNTCFMNSAIQCLVHTSEFAEYFREDYHQEINWKNPLGMVGELALAFGELLRRLWAPGR 184
Query: 385 AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP 444
A+APR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK KPY + KD+ GRP
Sbjct: 185 TAIAPRQFKMKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYKKSKDADGRP 244
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
DEEVA+E W +H ARNDS+IVDV QGQYKSTLVCP C+K+S+TFDPFMYL+LPL ST TR
Sbjct: 245 DEEVADEYWASHIARNDSIIVDVCQGQYKSTLVCPECNKISVTFDPFMYLSLPLQSTTTR 304
Query: 505 TMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
+MTVTVF +GS LP TVT+ K G C+DL+ ALS AC LK E L LAEV NH RF
Sbjct: 305 SMTVTVFTCDGSALPFACTVTVPKQGRCRDLMNALSCACSLKNSEELKLAEVRNHLFQRF 364
Query: 565 FENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
E+P +S+IKDD+H+ AY+ + + L +++R QE+ D + K FG PLV
Sbjct: 365 LEDPLISLSTIKDDDHLAAYKIAKSLKKTLLLRLIHRCQEQETGDTKAAQKLKPFGTPLV 424
Query: 625 TYL-EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNS----HNE 679
+ + ++ ++ DI V +LSPL R+ S +A +PE L+ S H+
Sbjct: 425 SLISHDDVITRGDIQKVVHTMLSPLLRSESLRQAD-------IPEPCSSLAASDMCHHSS 477
Query: 680 SVE--TAELEDLCSRELS-------FQLSLT-DERISSC--KPIQKDSILK---PGKHIK 724
S E T L D +++ S F+L L E ++C + +D +K +
Sbjct: 478 SDEACTNPLSDSMNKDSSGSRAVTLFKLPLQLVEESNACIDLSVGEDKTIKLSSTSTSML 537
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V +DW+ ++ E YD Y+++LP V K G KK R E +SL++CL+ FL EEPL P+DMW
Sbjct: 538 VYVDWSQELLEKYDIHYLENLPEVFKYGPVNKKARTEPLSLYTCLEGFLREEPLVPEDMW 597
Query: 785 --YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
YCP+CKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI + DL+ Y+
Sbjct: 598 LVYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIRDFDLTNYI 657
Query: 843 KSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+K+ + +Y+L+A++NHYGG+G GHYTA+ K+
Sbjct: 658 ANKNNTQRQLYELYALTNHYGGMGSGHYTAHIKL 691
>gi|359479088|ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
vinifera]
Length = 882
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/777 (45%), Positives = 482/777 (62%), Gaps = 49/777 (6%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI 178
G+DY LVP +W + W+ + + ++ + +V+ L L+L R+ + +
Sbjct: 94 GRDYALVPGDLWLQALKWHTDSRVATKDGRTFSVMEDDMADVYPLLLRLSILRETNSLGV 153
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
+++KK + + + + CK+ +E E IWD F+ Q + ++ ++ D Q DQ+IL
Sbjct: 154 KITKKDNAVEFFRRACKIFSVESELLHIWD-FSGQTTLFFINDKNKLPKDCQRQSDQEIL 212
Query: 239 LEVQVDNGIS---------MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQY 289
LE+QV G+S D + + +SL + G A N ++ +
Sbjct: 213 LELQV-YGLSDSLRCREGKKDEMAAQHSNLAGSSCGASLMMNGSLACMNSNSVHTNSPVF 271
Query: 290 PGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
GSS GE G GL GLQNLGNTCFMNS+LQCL HTP L Y
Sbjct: 272 YGSS--------------------GEAGSLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDY 311
Query: 348 FLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYN 407
FLGDYS EIN EN LGM GE+ALAFGDL+RKLW+ G VAPR FK KLARFAPQFSG+N
Sbjct: 312 FLGDYSREINHENALGMDGEIALAFGDLIRKLWAPGATPVAPRMFKSKLARFAPQFSGFN 371
Query: 408 QHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDV 467
QHDSQELLAFLLDGLHEDLNRVK KPYIE KD G PDEEVA+E W+NH ARNDS+IVDV
Sbjct: 372 QHDSQELLAFLLDGLHEDLNRVKCKPYIEAKDGEGWPDEEVADEYWRNHLARNDSIIVDV 431
Query: 468 FQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
QGQY+STLVCPVC KVSITFDPFMYL+LPLPST RTMT+TV A+G P P T+T+
Sbjct: 432 SQGQYRSTLVCPVCKKVSITFDPFMYLSLPLPSTTMRTMTLTVVSADGITQPSPCTITVP 491
Query: 528 KHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
K+G C+DLI ALS++C LK DE LL+AE+YN++I R+ E+P + +S I+D + +VAYR
Sbjct: 492 KNGKCEDLIQALSSSCYLKDDETLLVAEIYNNRIIRYLEDPTDSLSLIRDGDRLVAYRLP 551
Query: 588 RKQGGKIKLEIVNRWQEKSASDYLKG---SERKLFGAPLVTYLEEEHLSGADIDIAVSKL 644
+ +V ++ Y+ G S K FG PLV + ++G+D+ KL
Sbjct: 552 KVTNED---RLVVFMHQRIDEQYIHGKLSSSWKAFGIPLVARICNS-VNGSDVYNLYLKL 607
Query: 645 LSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETA-----ELEDLCSRELSFQLS 699
++P + T + + E + EL ++ + + E+ + Q
Sbjct: 608 INPFQITSEGISNNSDSSEKTVIEEVKELKDAISPVLSAGVNGINEIWVDPDSDAELQFY 667
Query: 700 LTDER--ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK 757
LTD++ + K + + + + + + +L+ W + E YD I LP + K+GF ++
Sbjct: 668 LTDDKGATRASKLVMDEPVTRLPRRLNLLVFWPEKKIEQYDTHLISSLPEIFKSGFIARR 727
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
QE++SL+ CL+AFL EEPLGPDDMWYCP CK HRQA+KKLDLW LP++LV HLKRFSY
Sbjct: 728 P-QESVSLYRCLEAFLKEEPLGPDDMWYCPGCKTHRQASKKLDLWRLPEILVIHLKRFSY 786
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
SR++KNKL+T+V+FP+ NLDLS Y+ K+G S Y L+A+SNHYG +GGGHYTA+
Sbjct: 787 SRFMKNKLETYVDFPVDNLDLSTYITHKNGMVSNRYMLYAVSNHYGSMGGGHYTAFV 843
>gi|449444827|ref|XP_004140175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 877
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/870 (43%), Positives = 513/870 (58%), Gaps = 97/870 (11%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP------IDNSDIIQN 100
+ + RW++ + + GD SF ++S + GP I +SD++ N
Sbjct: 24 YFVPYRWWKDAQDSLTGDADGKRGHSF-------LASPGSSYAGPMKIINSIFSSDLVFN 76
Query: 101 GNGSSEGDDLEVRRNLE---EGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR 157
E D + N E G+DY LV ++W + W+ + R S + +
Sbjct: 77 LR--REEDSSQNSENGEVGISGRDYALVSGEMWVEALKWHSDSKSSTRNGGSFSVAEDNI 134
Query: 158 VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTS 217
+V+ L L+L R+ + +R+SKK + +L+ + CKL +E E RIWD+ S
Sbjct: 135 ADVYPLQLRLSIQREANLLGVRISKKDNVVELFRRACKLFNVESELLRIWDF-------S 187
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQV---DNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
+S + + Q DQ++LLE+QV + I D I + S+ ++
Sbjct: 188 GHTISLFSNSNKQRQSDQEVLLELQVYGLSDFIKCKEGKKDELANSILGNSSATSLMMNG 247
Query: 275 ALSNGHTTGYRFNQ--YPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
A G + +R N + GSS ++ GL GLQNLGNTCFMN
Sbjct: 248 ASGTGSASCFRVNSSVFSGSS------------------REAGSLGLTGLQNLGNTCFMN 289
Query: 333 SALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
SALQCLVHTP L YFLGDY EIN +NPLGM+GE+ALAFGD+LRKLW+ G + VAPR F
Sbjct: 290 SALQCLVHTPKLVDYFLGDYGREINHDNPLGMNGEIALAFGDMLRKLWAPGASPVAPRTF 349
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K KLARFAPQFSG NQHDSQELLAFLLDGLHEDLNRVK+KPY+E KD GR D EVA+E
Sbjct: 350 KSKLARFAPQFSGCNQHDSQELLAFLLDGLHEDLNRVKKKPYVEAKDGDGRSDNEVADEY 409
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH ARNDS+IVDV QGQYKSTLVCP+C KVS TFDPFMYL+LPLPST RTMT+TV
Sbjct: 410 WQNHLARNDSIIVDVCQGQYKSTLVCPICKKVSTTFDPFMYLSLPLPSTTMRTMTLTVVS 469
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+GS P P+T+T+ K G +DLI ALS AC LK DE LL+AEVYN++I R+ E PA+ +
Sbjct: 470 TDGS-TPAPYTITVPKSGKWEDLIKALSIACSLKADETLLVAEVYNNRIIRYLEEPADSL 528
Query: 573 SSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKG---SERKLFGAPLVTYLEE 629
S I+D + +VAYR + + ++ L + ++ Y+ G + K FG PLV L
Sbjct: 529 SLIRDGDRLVAYRLAKDE-EQVPLAVF--MHQRIEEQYINGKRTTSLKAFGFPLVAKL-P 584
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDL 689
+G+DI KLLSP + + P+ ++E S ++ E E+E+
Sbjct: 585 GGFNGSDIKDIYKKLLSPYQVS--------------APDALEENHTSDVDTTEKTEVENG 630
Query: 690 CSRELSFQLS-LTDERISSC---------------KPIQKDSILKPG---------KHIK 724
S + + LT E +C K I + S ++ G K +
Sbjct: 631 TSSTSACVIDPLTIEDGVNCNSPSDADLQFYTTDDKGIIRGSEIEVGEFVVGSEKSKRLY 690
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
VL+ W + E YD + LP V K+ F K+ QE++SL+ CL+AFL EEPLGP+DMW
Sbjct: 691 VLVSWPEKQIERYDTHLLTSLPEVFKSSFFAKRP-QESVSLYKCLEAFLQEEPLGPEDMW 749
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YCP CK+H QA+KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ +LDLS Y+
Sbjct: 750 YCPSCKKHCQASKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPVDDLDLSMYVAY 809
Query: 845 KDGESYV-YDLFAISNHYGGLGGGHYTAYA 873
K+G+S Y L+A+SNHYG +GGGHYTA+
Sbjct: 810 KNGQSCTRYVLYAVSNHYGSMGGGHYTAFV 839
>gi|257050978|sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; Short=AtUBP8; AltName:
Full=Ubiquitin thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
Length = 871
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/799 (46%), Positives = 485/799 (60%), Gaps = 53/799 (6%)
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLE---EGQDYVLVPQQVWEKLFCWYKGGPALPRKMI 148
I NSDI+ + EGD L+ E G+D+ LV +W + WY + +
Sbjct: 71 IFNSDILFDLR--REGDALQNGETGEASVSGRDFALVSSDMWLQALKWYHDDKNTEKGVK 128
Query: 149 SEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWD 208
S R +V+ + L+L ++ + +++ KK ++ + + + CK+ ++ E+ RIWD
Sbjct: 129 SFSAGGVDRGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLRIWD 188
Query: 209 YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
+ DVS+ D Q DQ+ILLE+Q+ G+S + + L + S
Sbjct: 189 ISGQTTLFFESDVSNSK--DCQQQADQEILLELQI-YGLS-----DSIKLKESKKEDGST 240
Query: 269 TIAGGPALSNGHTTG--YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAGLQN 324
G ++NG G +RF + SF K GE G GL GLQN
Sbjct: 241 QQTNG--ITNGMNGGTVFRFGRSNSLSF---------------LGKAGEAGTLGLTGLQN 283
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGR 384
LGNTCFMNS+LQCL HTP L +FLG+YS EIN +NPLGM GE+ALAFGDLLR LW+ G
Sbjct: 284 LGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGA 343
Query: 385 AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP 444
+ VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD GRP
Sbjct: 344 STVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRP 403
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
D EVA+E W+NH ARNDS+IVDV QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP T R
Sbjct: 404 DAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMR 463
Query: 505 TMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
TM +TV A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++I RF
Sbjct: 464 TMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRF 523
Query: 565 FENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KLFGA 621
E P + ++ I+D + +V YR + ++ +K ++ G K FG
Sbjct: 524 LEEPTDSLTLIRDGDKLVVYRLKKDANNS---PLIVYMHQKLEEQFISGKSSPTWKAFGI 580
Query: 622 PLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESV 681
PLV+ L + +G+D++ KLLS + + EN E D+ SV
Sbjct: 581 PLVSRLCDVE-NGSDVENLYLKLLSSFKMPTEFFTEN--LENPTEEEATDKTDTDGTTSV 637
Query: 682 ETAELEDLCSRELS-----FQLSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHE 735
E D+ S +L LTD+R +S + + K+ + K + VL W +
Sbjct: 638 EDTNSTDVKETTESLPDPVLRLYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKELD 697
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
+YD + LP V K+G K QE++SLF CL+AFLTEEPLGPDDMWYCP CKEHRQA
Sbjct: 698 VYDTCLLSSLPEVSKSG---TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQA 754
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDL 854
KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ NLDLS Y+ K+G+ +Y Y L
Sbjct: 755 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYML 814
Query: 855 FAISNHYGGLGGGHYTAYA 873
+AISNHYG +GGGHYTAY
Sbjct: 815 YAISNHYGSMGGGHYTAYV 833
>gi|356550050|ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 872
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 380/867 (43%), Positives = 511/867 (58%), Gaps = 88/867 (10%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP------IDN 94
K+ +YF + RW++ + + D I+F S + GP I N
Sbjct: 19 KDQRVYF-VPHRWWKDAQDSMPADSDKKKGIAF-------ASFPGSSYAGPMKIINNIFN 70
Query: 95 SDIIQNGNGSSEGDDLE-VRRNLE---EGQDYVLVPQQVWEKLFCWYKGGPALPRKMISE 150
SD++ + DDL+ +R N E G+D+ LV +W + W+ + +
Sbjct: 71 SDLVFS---LRREDDLQHIRENGEVGVSGRDFALVSGDMWLQALKWHSDSKNVMKDDKGF 127
Query: 151 GIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYF 210
+ +V+ L L+L R+ + +R+SKK + +L+++ CK+ ++ E +WDY
Sbjct: 128 SATDSDMADVYPLQLRLSVQRETNSFGVRISKKDNAVELFKRACKMFSVDSETLCMWDY- 186
Query: 211 NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTI 270
+ T ++ +Q D Q DQ+ILLE+QV G+S S+
Sbjct: 187 -SDQITFLMNDKNQVPVDCQRQSDQEILLELQV-YGLS-----------------DSIRC 227
Query: 271 AGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYN-----------TAKKGEKG-- 317
G + + GS + M+D YD N ++ GE G
Sbjct: 228 REGKKDEMANFS------------GSASLKMNDTYDGANSDCMNSNSLTFSSGPGEAGSL 275
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
GL GLQNLGNTCFMNS+LQCL HTP L YFL DY EIN +NPLGM+GE+ALAFGDLLR
Sbjct: 276 GLTGLQNLGNTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFGDLLR 335
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ G + VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPYIE+
Sbjct: 336 KLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEV 395
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
KD RPDEEVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC KVS+TFDPFMYL+LP
Sbjct: 396 KDGDDRPDEEVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLP 455
Query: 498 LPSTVTRTMTVTVFYANGSGLPM--PFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPST RTMT+TV NG +P P+T+T+ K+G +DL ALS AC L DE LL+AE
Sbjct: 456 LPSTTMRTMTITV-SGNGGEMPQLSPYTITVPKNGRFEDLTRALSIACALGADETLLVAE 514
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGS- 614
VYN+ I RF E+P + +S I+D + +VAYRF + + +N+ E+ Y+ G
Sbjct: 515 VYNNCIIRFLEDPTDSLSLIRDADKLVAYRFLKYNADAPLVVFINQRMEEQ---YVYGKL 571
Query: 615 --ERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENG--FLPEVI 670
K FG P+V L +G+D+ K P + A EN F
Sbjct: 572 TLNWKAFGIPVVDMLYSV-TNGSDLRNLYLKWFYPFQNPIEEA-----LENCLVFKETEE 625
Query: 671 DELSNSHNESVETAELEDLCSRELSFQLSLTDER--ISSCKPIQKDSILKPG--KHIKVL 726
D + + S+ + + + +TDE+ I + K + + ++ G + + VL
Sbjct: 626 DTETEATTPSLGSNVNGLDTPSDGGMEFYVTDEKGTIKNSKILMNEPLVINGELRLLHVL 685
Query: 727 LDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
+ W+++ + Y+ LP V K+GF K+ QE++SL+ CL+AFL EEPLGP+DMWYC
Sbjct: 686 VCWSEEQLKKYNTQLCSSLPEVFKSGFLAKRP-QESVSLYKCLEAFLQEEPLGPEDMWYC 744
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEHRQA+KKLDLW LP++LV HLKRF YSRYLKNKL+T+V+FP+ NLDLS Y+ +
Sbjct: 745 PGCKEHRQASKKLDLWRLPEILVIHLKRFQYSRYLKNKLETYVDFPVDNLDLSAYITHGN 804
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYA 873
GESY Y L+A+SNHYG +GGGHYTA+
Sbjct: 805 GESYNYTLYAVSNHYGSMGGGHYTAFV 831
>gi|356543638|ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 874
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 363/798 (45%), Positives = 492/798 (61%), Gaps = 49/798 (6%)
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLE---EGQDYVLVPQQVWEKLFCWYKGGPALPRKMI 148
I NSD++ + E D +R N E G+D+ LV +W + W+ + +
Sbjct: 69 IFNSDLV--FSLRREEDSPRIRENGEVGVSGRDFALVSGDMWLQALKWHSDSKNVMKDDK 126
Query: 149 SEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWD 208
+ +V+ L L+L R+ + +R+SKK + +L+++ CK+ ++ E IWD
Sbjct: 127 GFSATDSDMADVYPLQLRLSVQRETNSFGVRISKKDNAVELFKRACKMFSVDSEMLCIWD 186
Query: 209 YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
Y + T ++ ++Q D Q DQ+ILLE+QV G+S S+
Sbjct: 187 Y--SDQITFLMNDNNQVPVDCQRQSDQEILLELQV-YGLS-----------------DSI 226
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAGLQNLG 326
G + +G + G+ G+ M+ ++++ GE G GL GLQNLG
Sbjct: 227 RCREGKKDEMANFSGSASLKMNGTYDGANSDCMNANSLTFSSGP-GEAGSLGLTGLQNLG 285
Query: 327 NTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAA 386
NTCFMNS+LQCL HTP L YFL DY EIN +NPLGM+GE+ALAFGDLLRKLW+ G +
Sbjct: 286 NTCFMNSSLQCLAHTPKLVDYFLEDYIREINHDNPLGMNGEIALAFGDLLRKLWAPGASP 345
Query: 387 VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDE 446
V+PR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPYIE+KD GR DE
Sbjct: 346 VSPRIFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEVKDGDGRRDE 405
Query: 447 EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTM 506
EVA+E W NH ARNDS+IVDV QGQYKSTLVCPVC KVS+TFDPFMYL+LPLPST RTM
Sbjct: 406 EVADEYWHNHLARNDSVIVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTVRTM 465
Query: 507 TVTVFYANGSGLPM--PFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
T+TV NG + P+T+T+ K+G +DL AL AC L DE LL+AEVYN+ I RF
Sbjct: 466 TITVVSGNGGEMSQLSPYTITVPKNGRFEDLTRALGIACSLGADETLLVAEVYNNCIIRF 525
Query: 565 FENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KLFGA 621
E+P + +S I+D + +VAYRF + + +N+ E+ Y+ G + K FG
Sbjct: 526 LEDPTDSLSLIRDADKLVAYRFLKCNVDAPLVVFINQRMEEQ---YVYGKQTLNWKAFGI 582
Query: 622 PLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSH--NE 679
P+V L +G+D+ K P + A EN + + +E + +
Sbjct: 583 PVVDRLYSV-TNGSDLRNLYLKWFYPFQNPIEEA-----LENCLVSKETEEDAETEVTTP 636
Query: 680 SVETAELEDLCSRELSFQLSLTDER--ISSCKPIQKDSILKPG--KHIKVLLDWTDDVHE 735
S+ + E + + +TDE+ I + K + + + G + + VL+ W+++ +
Sbjct: 637 SLGSNVNELDTPSDGGMEFYVTDEKGTIKNSKILMNEPLAINGDLRLLHVLVCWSEEQLK 696
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
+YD LP V K+GF K+ QE++SL+ CL+AFL EEPLGP+DMWYCP CKEHRQA
Sbjct: 697 IYDTQLCSSLPEVFKSGFLAKRP-QESVSLYKCLEAFLQEEPLGPEDMWYCPGCKEHRQA 755
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLF 855
+KKLDLW LP++LV HLKRF YSRYLKNKL+T+V+FP+ NLDLS Y+ + ESY Y L+
Sbjct: 756 SKKLDLWRLPEILVIHLKRFQYSRYLKNKLETYVDFPVDNLDLSAYITYGNDESYHYTLY 815
Query: 856 AISNHYGGLGGGHYTAYA 873
A+SNHYG +GGGHYTA+
Sbjct: 816 AVSNHYGSMGGGHYTAFV 833
>gi|13374862|emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabidopsis thaliana]
Length = 901
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 355/742 (47%), Positives = 463/742 (62%), Gaps = 50/742 (6%)
Query: 146 KMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKAR 205
K S G V+ R +V+ + L+L ++ + +++ KK ++ + + + CK+ ++ E+ R
Sbjct: 158 KSFSAGGVD--RGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLR 215
Query: 206 IWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSR 265
IWD + DVS+ D Q DQ+ILLE+Q+ G+S + + L +
Sbjct: 216 IWDISGQTTLFFESDVSNSK--DCQQQADQEILLELQI-YGLS-----DSIKLKESKKED 267
Query: 266 SSLTIAGGPALSNGHTTG--YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAG 321
S G ++NG G +RF + SF K GE G GL G
Sbjct: 268 GSTQQTNG--ITNGMNGGTVFRFGRSNSLSF---------------LGKAGEAGTLGLTG 310
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWS 381
LQNLGNTCFMNS+LQCL HTP L +FLG+YS EIN +NPLGM GE+ALAFGDLLR LW+
Sbjct: 311 LQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWA 370
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
G + VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD
Sbjct: 371 PGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGD 430
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD EVA+E W+NH ARNDS+IVDV QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP T
Sbjct: 431 GRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCT 490
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
RTM +TV A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++I
Sbjct: 491 SMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRI 550
Query: 562 FRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KL 618
RF E P + ++ I+D + +V YR + ++ +K ++ G K
Sbjct: 551 IRFLEEPTDSLTLIRDGDKLVVYRLKKDANNS---PLIVYMHQKLEEQFISGKSSPTWKA 607
Query: 619 FGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHN 678
FG PLV+ L + +G+D++ KLLS + + EN E D+
Sbjct: 608 FGIPLVSRLCDVE-NGSDVENLYLKLLSSFKMPTEFFTEN--LENPTEEEATDKTDTDGT 664
Query: 679 ESVETAELEDLCSRELS-----FQLSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDD 732
SVE D+ S +L LTD+R +S + + K+ + K + VL W
Sbjct: 665 TSVEDTNSTDVKETTESLPDPVLRLYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVK 724
Query: 733 VHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEH 792
++YD + LP V K+G K QE++SLF CL+AFLTEEPLGPDDMWYCP CKEH
Sbjct: 725 ELDVYDTCLLSSLPEVSKSG---TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEH 781
Query: 793 RQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYV 851
RQA KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ NLDLS Y+ K+G+ +Y
Sbjct: 782 RQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYR 841
Query: 852 YDLFAISNHYGGLGGGHYTAYA 873
Y L+AISNHYG +GGGHYTAY
Sbjct: 842 YMLYAISNHYGSMGGGHYTAYV 863
>gi|297812317|ref|XP_002874042.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
gi|297319879|gb|EFH50301.1| ubiquitin carboxyl-terminal hydrolase 8 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 350/735 (47%), Positives = 459/735 (62%), Gaps = 56/735 (7%)
Query: 157 RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRST 216
R +V+ + L+L ++ + +++ KK ++ + + + CK+ ++ E+ RIWD +
Sbjct: 157 RGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLRIWDISGQTTLF 216
Query: 217 SPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL 276
DVS+ D Q DQ++LLE+Q+ G+S DS + ++ S+ G
Sbjct: 217 FESDVSNSK--DCQQQADQEMLLELQI-YGLS-DS-------IKLKESKKE---DGSTQQ 262
Query: 277 SNGHTTG------YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAGLQNLGNT 328
+NG T G +RF + SF K GE G GL GLQNLGNT
Sbjct: 263 TNGITNGINGGTVFRFGRSNSLSF---------------LVKAGEAGTLGLTGLQNLGNT 307
Query: 329 CFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
CFMNS+LQCL HTP L +FLG+YS EIN +NPLGM GE+ALAFGDLLR LW+ G + VA
Sbjct: 308 CFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGSSTVA 367
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRV+ KPY+E KD GRPD EV
Sbjct: 368 PRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVRNKPYVEAKDGDGRPDAEV 427
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A+E W+NH ARNDS+IVD+ QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP T RTM +
Sbjct: 428 ADEYWRNHVARNDSIIVDLCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDL 487
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
TV A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++I RF E P
Sbjct: 488 TVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEP 547
Query: 569 AELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KLFGAPLVT 625
+ ++ I+D + +V YR + ++ +K ++ G K FG PLV+
Sbjct: 548 TDSLTLIRDGDKLVVYRLKKDANNS---PLIVYMHQKLEEQFISGKSSPTWKAFGIPLVS 604
Query: 626 YLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
L + +G+D++ KLLS + + EN E D+ SVE
Sbjct: 605 RLCDVE-NGSDLENLYLKLLSSFKMPTEFFTEN--LENRTEEEATDKADTDGTTSVEDIN 661
Query: 686 LEDLCSRELS-----FQLSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDP 739
D+ S +L LTD+R +S + I K+ + K + VL W ++YD
Sbjct: 662 STDVKETTESLPDPVLRLYLTDDRGNSIESEILKEKPVNKSKRVNVLARWPVKDLDVYDT 721
Query: 740 SYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKL 799
+ LP V K G K QE++SLF CL+AFLTEEPLGPDDMWYCP CKEHRQA KKL
Sbjct: 722 CLMSSLPEVSKFG---TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKL 778
Query: 800 DLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAIS 858
DLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ +LDLS Y+ K+G+ +Y Y L+AIS
Sbjct: 779 DLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDDLDLSSYISYKNGQTTYRYMLYAIS 838
Query: 859 NHYGGLGGGHYTAYA 873
NHYG +GGGHYTAY
Sbjct: 839 NHYGSMGGGHYTAYV 853
>gi|240256325|ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|240256327|ref|NP_851052.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005587|gb|AED92970.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005588|gb|AED92971.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 913
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 345/700 (49%), Positives = 440/700 (62%), Gaps = 48/700 (6%)
Query: 188 QLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI 247
+ + + CK+ ++ E+ RIWD + DVS+ D Q DQ+ILLE+Q+ G+
Sbjct: 210 ECFRRACKIFSLDSEQLRIWDISGQTTLFFESDVSNSK--DCQQQADQEILLELQI-YGL 266
Query: 248 SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTG--YRFNQYPGSSFGSTFMDMDDGY 305
S + + L + S G ++NG G +RF + SF
Sbjct: 267 S-----DSIKLKESKKEDGSTQQTNG--ITNGMNGGTVFRFGRSNSLSF----------- 308
Query: 306 DSYNTAKKGEKG--GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLG 363
K GE G GL GLQNLGNTCFMNS+LQCL HTP L +FLG+YS EIN +NPLG
Sbjct: 309 ----LGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLG 364
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+ALAFGDLLR LW+ G + VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLH
Sbjct: 365 MKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLH 424
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK KPY+E KD GRPD EVA+E W+NH ARNDS+IVDV QGQYKSTLVCP+C K
Sbjct: 425 EDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKK 484
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+ FDPFMYL+LPLP T RTM +TV A+GS LP+P TV + K G +DL AL TAC
Sbjct: 485 VSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTAC 544
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
L +E LL+ EVYN++I RF E P + ++ I+D + +V YR + ++
Sbjct: 545 SLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRLKKDANNS---PLIVYMH 601
Query: 604 EKSASDYLKGSER---KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGG 660
+K ++ G K FG PLV+ L + +G+D++ KLLS + +
Sbjct: 602 QKLEEQFISGKSSPTWKAFGIPLVSRLCDVE-NGSDVENLYLKLLSSFKMPTEFFTEN-- 658
Query: 661 KENGFLPEVIDELSNSHNESVETAELEDLCSRELS-----FQLSLTDERISSCKP-IQKD 714
EN E D+ SVE D+ S +L LTD+R +S + + K+
Sbjct: 659 LENPTEEEATDKTDTDGTTSVEDTNSTDVKETTESLPDPVLRLYLTDDRGNSIEAEMLKE 718
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
+ K + VL W ++YD + LP V K+G K QE++SLF CL+AFLT
Sbjct: 719 KPVNKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKSG---TKRPQESVSLFKCLEAFLT 775
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
EEPLGPDDMWYCP CKEHRQA KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+
Sbjct: 776 EEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLD 835
Query: 835 NLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
NLDLS Y+ K+G+ +Y Y L+AISNHYG +GGGHYTAY
Sbjct: 836 NLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYV 875
>gi|414877602|tpg|DAA54733.1| TPA: hypothetical protein ZEAMMB73_341521 [Zea mays]
Length = 888
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 349/767 (45%), Positives = 473/767 (61%), Gaps = 46/767 (5%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGI--VNEKRVEVFXLCLKLIDSRDNSQT 176
+ Y L+P ++ K WY +P K + + E V ++ + L++ SRD
Sbjct: 102 ARSYALLPADLFSKAREWY----IVPAKSAVKNVSPAGEGSVNIYPIMLRVSASRDTYTL 157
Query: 177 VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
+++ KK ++ + +++ CK+ + E IWD+ + +++ D DQ+
Sbjct: 158 TVKIGKKDNSTENFKRACKILTADSEPVHIWDFSGRTTYIVMTELNRSPHDSK--SADQE 215
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
+ L++ + DL+ EP + G S+G SS
Sbjct: 216 MPLQIHI----------YDLS----EP------MVNG---SDGKRDELALTLGGSSSSNG 252
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEI 356
M+MD DS + + K GL GL NLGNTCFMNSA+QCL HT L YFLGD+ E+
Sbjct: 253 GSMNMD--LDSSSGSSKQVGSGLTGLDNLGNTCFMNSAVQCLAHTSKLVDYFLGDFHKEV 310
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
N NPLGM GELA AFGDLLRKLW+ R VAPR FK +L RFAPQFSG+NQHDSQELLA
Sbjct: 311 NPHNPLGMKGELAYAFGDLLRKLWAIDRTPVAPRQFKARLGRFAPQFSGFNQHDSQELLA 370
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD+ QGQYKSTL
Sbjct: 371 FLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHLARNDSIIVDICQGQYKSTL 430
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCP+C KVS+TFDPFMYL+LPLPST RTMT+TVF +G+ P P+T+++ K G + LI
Sbjct: 431 VCPICKKVSVTFDPFMYLSLPLPSTTMRTMTITVFSTDGTSGPSPYTISVPKSGDTRTLI 490
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKL 596
ALS+AC L+ DE LL+AEVYN+ + R+ + P+E+IS I+D + +VAYR + +
Sbjct: 491 NALSSACSLRDDERLLVAEVYNNSLIRYLDEPSEVISLIRDGDRLVAYRLPKDNEDAPIV 550
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
N+ E S S + + S K FG PLV+ L + ++G++I K+++P R + A
Sbjct: 551 VFRNQRMESSLSSFGRKS-WKTFGTPLVSSLPDT-VTGSNIYNLFLKVMTPFRVSRGDAA 608
Query: 657 AHGGK--ENGFLPEVID-ELSN--SHNESVETAELEDLCSRELSFQLSLTDERISSCK-P 710
E+ + E D +S+ S + S+ +ED E Q LT+ERI +
Sbjct: 609 VADQTLGESSLVDETEDINMSSDASEHTSINNNSVEDETGTEDVMQFFLTNERIPDQRMK 668
Query: 711 IQKD---SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFS 767
I+ D ++ P K + V + W D + Y+ S + LP V+K ++ Q+ SL++
Sbjct: 669 IEMDLSITVNDPHKRLHVAVCWEDSGLDQYNFSSLNSLPEVYKAVLFSRRP-QDTCSLYA 727
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CL+AF+ EEPLGP+DMWYCP CKEHRQA+KKLDLW LP++L+ HLKRFSYSRY KNKL+T
Sbjct: 728 CLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLET 787
Query: 828 FVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
FV+FPI +LDLSKY+ + + + Y L+A SNHYG LGGGHYTAY
Sbjct: 788 FVDFPIHDLDLSKYIGHRCQDVPHNYRLYATSNHYGSLGGGHYTAYV 834
>gi|357453291|ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 871
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 355/789 (44%), Positives = 468/789 (59%), Gaps = 94/789 (11%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI 178
G+D+ LV +W + W+ + + +V+ L L+L R+ + +
Sbjct: 98 GRDFALVSGDMWLQALKWHSDSKNATKDDKGFSATDTDMGDVYPLQLRLSVQRETNSFEV 157
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDY-------FNKQRSTSPLDVSDQTLDDAML 231
R+SKK +T +LY++ CKL ++ E RI DY F+ + P D Q+
Sbjct: 158 RISKKDNTVELYKRACKLFSVDSEMLRILDYSGHITLLFSDGENHVPTDFQRQS------ 211
Query: 232 QMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPG 291
DQ+ LLE+QV G+S S+ G S
Sbjct: 212 --DQENLLELQV-YGLS-----------------DSMRCREGKKDS-------------- 237
Query: 292 SSFGSTFMDMDDGYDSYNTAK------KGEKG--GLAGLQNLGNTCFMNSALQCLVHTPD 343
GS M M+ D + GE G GL GLQNLGNTCFMNS+LQCL HTP
Sbjct: 238 ---GSASMKMNGTADCTRASSLTFCLGPGEAGSLGLTGLQNLGNTCFMNSSLQCLTHTPK 294
Query: 344 LAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQF 403
L YFL DYS EIN++NPLGM+GE+A AFGDLLRKLW+ G + VAPR FK KLARFAPQF
Sbjct: 295 LVDYFLEDYSREINSDNPLGMNGEIASAFGDLLRKLWAPGASPVAPRMFKSKLARFAPQF 354
Query: 404 SGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSL 463
SG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD GRPDEEVA+E W H ARNDS+
Sbjct: 355 SGFNQHDSQELLAFLLDGLHEDLNRVKCKPYVEAKDGDGRPDEEVADEYWNYHLARNDSV 414
Query: 464 IVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPM--P 521
IVDV QGQYKSTLVCPVC KVS+TFDPFMYL+LPLPST RTMT+TV G+ P
Sbjct: 415 IVDVCQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMTLTVVSNTCDGMSQLSP 474
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
+T+++ KHG +DL ALSTAC L DE LL+AEVYN++I RF E+PA+ +S I+D + +
Sbjct: 475 YTISVPKHGKFEDLTRALSTACSLGPDEALLVAEVYNNRIIRFLEDPADSLSLIRDADKL 534
Query: 582 VAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGS---ERKLFGAPLVTYLEEEHLSGADID 638
VAYRF + + +N+ E+ Y+ G K FG P+V L ++G+D+
Sbjct: 535 VAYRFPKDNVDTPLVVFINQRMEEQ---YIYGKLAPNWKAFGIPVVASL-CNIVNGSDLR 590
Query: 639 IAVSKLLSPLR--------------RTYSSAKAHGGKENGFLPEVIDELSNSHNESVETA 684
K PL+ RT A+ G ++G +++ L + +E
Sbjct: 591 NLYLKWFHPLQDLIEETLESCVVSERTEEVAEIEGVADSGS-DTIVNGLDTPSDGEMEFY 649
Query: 685 ELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKD 744
+D + ++ + +I +P+ + L P + VL+ W++ + YD
Sbjct: 650 ITDD--------KGTVKNSKILMNEPLTVNGGLNP---LHVLVCWSEKQIKKYDTQLSSS 698
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
LP V K+ F K+ QE +SL+ CL+ FL EEPLGP+DMWYCP CK HRQA+KKLDLW L
Sbjct: 699 LPEVCKSSFLAKRP-QEPVSLYKCLETFLQEEPLGPEDMWYCPGCKNHRQASKKLDLWRL 757
Query: 805 PDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGL 864
P++LV HLKRF YSR++KNKL+T V+FP+ NLDLS Y+ + +SY Y L+AISNH+G +
Sbjct: 758 PEILVIHLKRFQYSRFMKNKLETLVDFPVDNLDLSSYITHGNQKSYHYTLYAISNHFGSM 817
Query: 865 GGGHYTAYA 873
GGGHYTA+
Sbjct: 818 GGGHYTAFV 826
>gi|224059196|ref|XP_002299762.1| predicted protein [Populus trichocarpa]
gi|222847020|gb|EEE84567.1| predicted protein [Populus trichocarpa]
Length = 624
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 312/580 (53%), Positives = 401/580 (69%), Gaps = 28/580 (4%)
Query: 311 AKKGEKG--GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ GE G GL GLQNLGNTCFMNSA+QCL HTP L YFLGDY E+N +NPLGM+GE+
Sbjct: 17 GRSGEAGSLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGREVNHKNPLGMNGEI 76
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFGDLLR+LW+ G VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNR
Sbjct: 77 ALAFGDLLRRLWAPGATPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNR 136
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK KPY+E KD RPDEEVA+E W+NH ARNDS+IVDV QGQYKSTLVCP C KVS+TF
Sbjct: 137 VKSKPYVEAKDEESRPDEEVADEYWQNHVARNDSVIVDVCQGQYKSTLVCPDCRKVSVTF 196
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMYL+LPLPST TRTMT+TV A+GS P +T+++ K G C+DLI ALS AC L ID
Sbjct: 197 DPFMYLSLPLPSTNTRTMTLTVVSADGSIQPSSYTISVPKFGKCEDLIHALSIACSLGID 256
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E LL+AEVYN++I RF E PA+ +S I+D++ +VAYR + + +++ E+
Sbjct: 257 ETLLVAEVYNNRIIRFLEEPADYLSLIRDNDRLVAYRLKKDFDNSPLVVFMHQHMEEHYF 316
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPE 668
S K FG PLV + +SG+DI +L++P R G +N
Sbjct: 317 HGKLTSSWKAFGIPLVGNV-HNFVSGSDIHNLYLQLVAPFR-----IPPDGTLDNDLDST 370
Query: 669 VIDELSNSHNESVETAE----------LEDLCSRELSFQLS-----LTDERISSCKPIQK 713
I+E+ + + + + +E EL F L+ + DE I +P+ K
Sbjct: 371 TIEEVEGMVDNTSSSPDGDAKPCSAKGVELPSDSELQFYLTDEKGMVKDENIVMNEPVPK 430
Query: 714 DSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFL 773
+ + VL+ W + + + YD S + LP + K+GF K+ QE++SL++CL+AFL
Sbjct: 431 IGL---HRRFNVLVCWPEKLTKQYDTSLLSSLPEIFKSGFFAKRP-QESVSLYNCLEAFL 486
Query: 774 TEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
EEPLGP+DMWYCP CK+HRQA+KKLDLW LP++LV HLKRFSY+ KNKL+T+V+FP+
Sbjct: 487 KEEPLGPEDMWYCPSCKQHRQASKKLDLWRLPEILVIHLKRFSYTHSAKNKLETYVDFPV 546
Query: 834 LNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAY 872
+LDLS ++ K+G+ S+ Y L+AISNHYG +GGGHYTA+
Sbjct: 547 DDLDLSTHLSYKNGQLSHRYMLYAISNHYGSMGGGHYTAF 586
>gi|414588303|tpg|DAA38874.1| TPA: hypothetical protein ZEAMMB73_967629 [Zea mays]
Length = 829
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 351/751 (46%), Positives = 458/751 (60%), Gaps = 52/751 (6%)
Query: 133 LFCWYKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYE 191
L Y GGP LPRK I+ G + +EV+ L L+LI +T IR+SKK
Sbjct: 62 LVVGYGGGPTLPRKAINTGFSQTDLAIEVYPLRLQLILMSRGERTFIRISKK-------- 113
Query: 192 KVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS 251
VC IWDY+ + + S +D D+TLDDA +QMDQ+IL+EV D S+D
Sbjct: 114 -VC-----------IWDYYGRTKH-SLMDSLDKTLDDANIQMDQNILVEVTTDASGSLDG 160
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
+ +S L A +N + Y + P S D+D+ + S
Sbjct: 161 LVKRNNFFESDAPKSGLPDENFAA-NNYASRSYSSSLTPSIYLRSPNGDLDNVHGSSGMI 219
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALA 371
+G GL GL NLGNTC+MNSA+QCLVHTP +YF DY EIN +NPLG GELALA
Sbjct: 220 TRGSPLGLTGLLNLGNTCYMNSAIQCLVHTPQFTKYFCEDYHREINRQNPLGNVGELALA 279
Query: 372 FGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
FG+LLRKLW+ GRA V+PR FK KL+RFA QFSGYNQHDSQELLAFLLDGLHEDLNRVK
Sbjct: 280 FGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVK 339
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+PYI D+ GR DEEVA+E W NH ARN+S+IVDV QGQYKSTLVCPVC KVS+TFDP
Sbjct: 340 HRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDP 399
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
FMYL+LPL TR++T VF +GS P PFTV + K G C+DL+ AL AC LK E
Sbjct: 400 FMYLSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEK 459
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDY 610
LL+AE+ NH+I+RF ++P +S+I DD+H+ Y+ + + ++ V+R ++ +
Sbjct: 460 LLIAEIRNHKIYRFIDDPVLQLSTISDDDHLAVYKLPKLEKRVNYIQFVHRHEDLDHGNN 519
Query: 611 LKGSERKLFGAPLVTYLEE-EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
+ K +G PL+ + E ++G DI V K+L P+ R
Sbjct: 520 NSLTSWKPYGVPLLAQISRNEIVTGFDIHELVHKMLVPVLRN------------------ 561
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQK--DSILKPGKHIKVL- 726
D L + SV T + QL L D+ S I+K D+I P + +
Sbjct: 562 PDSLHLAVQSSVST-RTHSYHTDSSKCQLLLVDD---SNTVIEKSNDAIRIPQSSLATVF 617
Query: 727 -LDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
++W + D +++ LP V K+TR EA+SL++CLDAFL EEPL P+DMWY
Sbjct: 618 FINWPKADLKKIDTHHLEYLPEVFMYAPPAKRTRGEALSLYACLDAFLREEPLVPEDMWY 677
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK 845
CP+CKE RQA+KKLDLW LP+VLV HLKRFS+SR K KL+TFVNFPI +LDL+ Y+ +K
Sbjct: 678 CPRCKEQRQASKKLDLWRLPEVLVIHLKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANK 737
Query: 846 D-GESYVYDLFAISNHYGGLGGGHYTAYAKV 875
E +Y+L+A+SNHYG + GHYTA+ K+
Sbjct: 738 KTSERQIYELYAVSNHYGNMASGHYTAHIKL 768
>gi|225439374|ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
vinifera]
Length = 961
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 354/787 (44%), Positives = 473/787 (60%), Gaps = 63/787 (8%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI 178
GQ+Y L+ + +W + W+ A + + S +VF L ++L S + ++
Sbjct: 166 GQEYALLSESMWLRALKWHNDSNAAEKDVGSILAAEVYTQDVFPLQIRLSVSWGTNSLLV 225
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
++S+K + ++YE+ + +E E IWD F+ Q + ++ ++ +D + + D+ IL
Sbjct: 226 KISQKDNPIEIYERASTIFRVESELLHIWD-FSGQTTLLLMNDRTKSANDYLSRSDEQIL 284
Query: 239 LEVQVDNGI--SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
LE+QV G+ SM G + ++ + G NG T F+ Y
Sbjct: 285 LELQV-YGLTDSMKGRGGKKDDQMVGQTKMEGSFVSGSLKMNGSTGN--FDSYFTLPHTK 341
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEI 356
F GY ++ GL GL N+GNTCFMNSA+QCLVHTP L YFLGDY EI
Sbjct: 342 LF---GRGY------REAGFLGLTGLHNIGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEI 392
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
N ENPLGM+GELALAFGDLLRKLW+ G VAPR FK KL+ FAPQFSGYNQHDSQE LA
Sbjct: 393 NYENPLGMNGELALAFGDLLRKLWAPGATPVAPRMFKLKLSSFAPQFSGYNQHDSQEFLA 452
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLNRVK KPYIE D GRPDEEVA+E W+NH ARNDS+IV++ QGQ++S L
Sbjct: 453 FLLDGLHEDLNRVKCKPYIEAGDPDGRPDEEVADEYWRNHLARNDSIIVNLCQGQFRSML 512
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCPVC KVS+TFDPFMYL+LPLPST RTMTVTV +G+ LP P TVT+ K G KDLI
Sbjct: 513 VCPVCKKVSVTFDPFMYLSLPLPSTTMRTMTVTVLSTDGTTLPYPCTVTVPKCGRLKDLI 572
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKL 596
ALS AC L+ DE LL+AE+YN+ I R+ E P++ ++ I+D + +VAYR
Sbjct: 573 QALSIACSLRNDERLLVAEIYNNCIIRYLEEPSDSLALIRDGDRLVAYRLSEDSKDCDTS 632
Query: 597 EIVNRWQEKSASDYLKGSE---RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYS 653
+V E+ + G RK+FG PLV + E +G DI KLL P
Sbjct: 633 SLVVFMHERVEKHDINGKAELCRKMFGIPLVVRMSECS-NGCDIHKQFLKLLDPF----- 686
Query: 654 SAKAHGGKENGFLP--EVIDELSNSHNESVETAELEDLCSRELS---------------- 695
F+P + +D+++ + N + E E+ED S +S
Sbjct: 687 -----------FMPTEDSLDDIT-AGNAANEDTEMEDAISSTVSNGDANSDSETGDELQL 734
Query: 696 ---FQLSLTDERISS----CKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVV 748
F LTDE+ S+ + + I + + + VL+ W + E YD + LP +
Sbjct: 735 GNNFSFYLTDEKGSTKGSNINMNKLELISQLPRRLNVLVHWPYRMIEKYDTCLLSLLPEI 794
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
K K+ QE++SL+ CL+AFL EEPLGP+DMW CP CK+HRQA+KKLDLW LP++L
Sbjct: 795 CKPELFAKRP-QESVSLYKCLEAFLKEEPLGPEDMWNCPCCKKHRQASKKLDLWRLPEIL 853
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGG 867
V HLKRFSYSR+ KNKL+TF++FPI +LDLS Y+ K+ S Y L+AI NHYGG+G G
Sbjct: 854 VIHLKRFSYSRFWKNKLETFIDFPIDDLDLSTYIAQKNSHLSNHYKLYAICNHYGGMGSG 913
Query: 868 HYTAYAK 874
HYTA+ +
Sbjct: 914 HYTAFVR 920
>gi|449501186|ref|XP_004161301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 949
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 341/777 (43%), Positives = 472/777 (60%), Gaps = 50/777 (6%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALP----RKMISEGIVNEKRVEVFXLCLKLIDSRDNS 174
G++Y L+ + +W + + A R E I+ VF L ++++ S + +
Sbjct: 163 GREYALIGESMWLQALKRHNDFEATSNYGGRLFRDEDILQA----VFPLQIRILVSWETN 218
Query: 175 QTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMD 234
+++++K ++ Y++ + E IWD F+ Q + + S+ LD +++Q
Sbjct: 219 LLTVKINRKDNSANFYKRASVIFNSNSELFHIWD-FSGQTNKLFTNNSNNFLDGSLVQGV 277
Query: 235 QDILLEVQV----DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYP 290
+++LLE+QV DN + G L E R + P + NG T +F+
Sbjct: 278 KEVLLELQVLETLDNMMGRYGKGAKLT----EEQRKT---EKSPTIINGITEKVKFH--- 327
Query: 291 GSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
+ D + N+ GL GLQNLGNTCFMNSALQCLVHTP L YFLG
Sbjct: 328 --------LTESDRMIAGNSFGVASSMGLTGLQNLGNTCFMNSALQCLVHTPKLVDYFLG 379
Query: 351 DYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
++ EIN +NPLGM GELALAFGDLLRKLW+ G +V PR FK KLA FAPQFSGYNQHD
Sbjct: 380 NFQKEINYDNPLGMKGELALAFGDLLRKLWAPGSKSVPPRMFKLKLANFAPQFSGYNQHD 439
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQE L+FLLDGLHEDLNRVK KPY E KD GR DEEVA E W+NH ARNDS+IVD+ QG
Sbjct: 440 SQEFLSFLLDGLHEDLNRVKCKPYFEAKDVEGRRDEEVAEEYWQNHLARNDSIIVDLCQG 499
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
QY+STLVCP C+K+S+TFDPFMYL+LPLPST R+MT+ V +G LP FTV++ K G
Sbjct: 500 QYRSTLVCPACNKLSVTFDPFMYLSLPLPSTTMRSMTLMVISCDGISLPSTFTVSVPKSG 559
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
KDLI ALSTAC L+ DE LLLAEVY ++I R E+P++ ++ I++++ +VAYRF R +
Sbjct: 560 RLKDLIDALSTACSLRADETLLLAEVYKNRICRVLEDPSDSLALIRNEDKLVAYRFPRDE 619
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE-EHLSGADIDIAVSKLLSPLR 649
+ +++ E + S K FGAP V + + H S DI K L PL+
Sbjct: 620 ESSKLIVYMHQQSETHDNSGKLISGSKTFGAPFVAKVPDLPHES--DIRQLFLKFLDPLK 677
Query: 650 ----RTYSSAKAHGG--------KENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQ 697
++S+ G ++ P +D + ++E++ + L + L+ Q
Sbjct: 678 MPAEESFSNCDGEAGVSANDDFEMDDASDPANLDPDGSPNDETIVNSCLPADFTFYLAHQ 737
Query: 698 LSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK 757
+ ++ + KP + +I K + + V++ W D + YD + LP V K ++
Sbjct: 738 MGASEGTL--IKPNEPLAISKSTERLDVIVMWPDTMVNKYDTCLMSSLPDVSKPNLHPRR 795
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
QE++ L+ CL+AFL EEPLGPDDMWYCP+CK+ +QA KKLDLW LP++LV HLKRFSY
Sbjct: 796 L-QESVDLYKCLEAFLKEEPLGPDDMWYCPRCKKPQQARKKLDLWRLPEILVIHLKRFSY 854
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
SR+ KNKL+TFV+FPI +LDLS Y+ ++ S Y L+A+SNHYGG+G GHYTAY
Sbjct: 855 SRFFKNKLETFVDFPIDDLDLSNYIAYQNSHLSNRYMLYAVSNHYGGMGAGHYTAYV 911
>gi|242084278|ref|XP_002442564.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
gi|241943257|gb|EES16402.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
Length = 890
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 343/778 (44%), Positives = 472/778 (60%), Gaps = 45/778 (5%)
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLK 166
D+L + + Y L+P ++ K WY K +S V ++ + L+
Sbjct: 93 ADELLEQTASASARSYALLPADLFAKARDWYIDSAKSAGKNVSPA---GDSVNIYPIMLR 149
Query: 167 LIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTL 226
+ +R +++ KK ++ + +++ K+ + E IWD F+ + + ++ +++
Sbjct: 150 VSATRGTYTLTVKIGKKDNSTENFKRANKILTADSEPVHIWD-FSGRTTYIVMNELNRSP 208
Query: 227 DDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA-GGPALSNGHTTGYR 285
D+ DQ++ L++ + + G+D R L + GG + SNG T
Sbjct: 209 HDSK-SADQEMPLQIHIYDLSEPMVNGSD-------GKRDELALTLGGSSFSNGGT---- 256
Query: 286 FNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLA 345
M+MD DS + + K GL GL NLGNTCFMNSA+QCL HT L
Sbjct: 257 -------------MNMD--VDSSSGSSKQVGSGLTGLDNLGNTCFMNSAVQCLAHTSKLV 301
Query: 346 QYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSG 405
YFLGD+ EIN NPLGM GELA AFGDLLRKLW+ R VAPR FK +L RFAPQFSG
Sbjct: 302 DYFLGDFHKEINPHNPLGMKGELACAFGDLLRKLWAIDRTPVAPRQFKSRLGRFAPQFSG 361
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
+NQHDSQELLAFLLDGLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IV
Sbjct: 362 FNQHDSQELLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHLARNDSIIV 421
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
D+ QGQYKSTLVCP+C KVS+TFDPFMYL+LPLP+T RTMT+TVF +G+ P P+T++
Sbjct: 422 DICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPTTTMRTMTITVFSTDGTSGPSPYTIS 481
Query: 526 LMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR 585
+ K G + LI LS AC L+ DE LL+AEVYN+ + R+ + P+E+IS I+D + +VAYR
Sbjct: 482 VPKSGDTRTLINTLSNACSLRDDERLLVAEVYNNSLIRYLDEPSEVISLIRDGDRLVAYR 541
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
+ + N+ E S +++ + S K FG PLV+ L + ++G+ I K++
Sbjct: 542 LPKDNEDAPIVVFRNQRMESSLANFGRKS-WKTFGTPLVSSLPDT-ITGSTICNLFLKVM 599
Query: 646 SPLR--RTYSSAKAHGGKENGFLPEVID---ELSNSHNESVETAELEDLCSRELSFQLSL 700
+P R R A E+ + E+ D S ++ +ED E Q L
Sbjct: 600 TPFRVSRDDVPAAVKTVGESSLVDEIADSNMSADASEPTTINNNSVEDETGTEDVMQFFL 659
Query: 701 TDERISSCK-PIQKD---SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVK 756
T+ER + I+ D ++ P K + V + W D+ + YD + LP V+K +
Sbjct: 660 TNERFPDQRMKIEMDLSITVKDPHKRLHVAVCWEDNGLDQYDLDSLDSLPEVYKAVLFSR 719
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
+ Q+ SL++CL+AF+ EEPLGP+DMWYCP CKEH+QA+KKLDLW LP++L+ HLKR S
Sbjct: 720 RP-QDTCSLYACLEAFIKEEPLGPEDMWYCPGCKEHQQASKKLDLWRLPEILIIHLKRCS 778
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
YSRY K KL+TFV+FPI +LDLSKY+ + + + Y L+AISNHYG LGGGHYTAY
Sbjct: 779 YSRYTKYKLETFVDFPIHDLDLSKYIGHRCQDVPHNYRLYAISNHYGSLGGGHYTAYV 836
>gi|326500890|dbj|BAJ95111.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 347/732 (47%), Positives = 449/732 (61%), Gaps = 40/732 (5%)
Query: 152 IVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFN 211
+ E V ++ + L++ +R + +++S+K ++ + ++K K+ E E IWD+
Sbjct: 17 LTEEASVNIYPIMLRVSVTRGTNALTVKISRKDNSAENFKKANKILASESEPVHIWDF-- 74
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA 271
R+T L + DQ++ LE+Q + + G SLT+
Sbjct: 75 SGRTTFILMNEWNRMPQDTRSSDQEMPLEIQFYDISEPPANG-----AAGRKDELSLTM- 128
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
G A SNG MDMD DS K GL GL NLGNTCFM
Sbjct: 129 GSSAFSNG-----------------GIMDMD--LDSSGGICKQVGSGLIGLDNLGNTCFM 169
Query: 332 NSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
NSA+QCL HT L +FLGDY EINT NPLGM GELA +FGDL+RKLW+ + +PR
Sbjct: 170 NSAVQCLAHTSKLVDFFLGDYQKEINTHNPLGMKGELAYSFGDLVRKLWAIDGTSFSPRQ 229
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK +LARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY E KDS GRPDEEVA+E
Sbjct: 230 FKARLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYAEAKDSDGRPDEEVADE 289
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W NH ARNDS+IVD QGQYKSTLVCP+C KVSITFDPFMYL+LPLPST RTMTVTVF
Sbjct: 290 YWGNHLARNDSIIVDTCQGQYKSTLVCPLCKKVSITFDPFMYLSLPLPSTTMRTMTVTVF 349
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS P P+TV++ K G K LI ALS AC L+ DE LL+AEVYN + R+ E+P++
Sbjct: 350 STDGSIGPSPYTVSIPKSGDFKTLINALSNACSLRDDERLLVAEVYNSSLIRYLEDPSDD 409
Query: 572 ISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
IS I+D + +VAYR + G + + E S S + + S + FG PLV+ L +
Sbjct: 410 ISLIRDGDKLVAYRLPKDSEGAPVVVFKSERMESSISSFGRKSWKN-FGTPLVSNLPDT- 467
Query: 632 LSGADIDIAVSKLLSPLRRTYS---SAKAHGGKENGFLPEVIDELSNSHNE--SVETAEL 686
+ G I + K L+P R + A GK + ++S+ E S+ T
Sbjct: 468 IDGRTIYNLLLKALTPFRVSKDDALDADQITGKSSPVNETSDVDMSSDAAECSSMNTNAG 527
Query: 687 EDLCSRELSFQLSLTDERISSCK-PIQKDSILKPG---KHIKVLLDWTDDVHELYDPSYI 742
ED E SL ER + + I+ D + K + V + W D+ + Y+ +
Sbjct: 528 EDDMMTEGGMLFSLNTERFPNQRLKIEMDQTITLSNLQKRLIVSVSWQDNGLKQYNLDSL 587
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
LP V+KT +K QE SL++CL+AF+ EEPLGP+DMWYCP CKEHRQA+KKLDLW
Sbjct: 588 DSLPEVYKTVLFTRKP-QETCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLW 646
Query: 803 MLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHY 861
LP++L+ HLKRFSYSRY KNKLDT+V+FPI +LDLS Y++ + G+ S Y L+A+SNHY
Sbjct: 647 RLPEILIIHLKRFSYSRYTKNKLDTYVDFPIHDLDLSSYIRDRSGQMSNHYQLYAVSNHY 706
Query: 862 GGLGGGHYTAYA 873
G +GGGHYTAY
Sbjct: 707 GSMGGGHYTAYV 718
>gi|357155832|ref|XP_003577253.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 879
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 338/773 (43%), Positives = 453/773 (58%), Gaps = 82/773 (10%)
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI 178
+ Y LV ++ K W+ K + E V ++ + L++ +R + +
Sbjct: 112 ARSYALVAADLFGKARAWHLESAKSNGK--GSLLTEETSVNIYPIMLRVSVTRGTNALTV 169
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
++SKK ++ + +++ K+ + E IWD+ R+T L + + DQ++
Sbjct: 170 KISKKDNSVENFKRATKILAPDSEPVHIWDF--SGRTTFILMNEWNRMPQDLRSSDQEMP 227
Query: 239 LEVQVDNGISMDSTG-----NDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSS 293
LE+Q + S G ++LAL G LSNG
Sbjct: 228 LEIQFYDMSEPTSNGAVGKKDELALT-----------MGSSVLSNG-------------- 262
Query: 294 FGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS 353
+ MDMD DS + K GL GL NLGNTCFMNS++QCL HT L
Sbjct: 263 ---SIMDMD--LDSSSGICKQVGSGLTGLDNLGNTCFMNSSVQCLAHTSKL--------- 308
Query: 354 DEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
GELA +FGDLLRKLW+ R++ +PR FK +LARFAPQFSG+NQHDSQE
Sbjct: 309 ------------GELAYSFGDLLRKLWTIDRSSFSPRQFKARLARFAPQFSGFNQHDSQE 356
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
LLAFLLDGLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD QGQYK
Sbjct: 357 LLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHLARNDSIIVDTCQGQYK 416
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
STLVCP+C KVS+TFDPFMYL+LPLPST RTMT+TVF +G P P+TV + K G K
Sbjct: 417 STLVCPLCKKVSVTFDPFMYLSLPLPSTTMRTMTITVFSTDGITGPSPYTVNVPKSGDTK 476
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
LI ALS AC L+ DE LL+AEVYN I R+ E P+E+IS I+D + +VAYR +
Sbjct: 477 TLINALSNACSLRDDERLLVAEVYNSSIIRYLEEPSEVISLIRDGDRLVAYRLPKDSEDA 536
Query: 594 IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR---- 649
+ N+ E S S + + S + FGAPLV+ L ++G I +LL P R
Sbjct: 537 PIVVFKNQRMESSLSSFGRKSWKN-FGAPLVSSLPGT-INGHTIYNLFLQLLVPFRVSKD 594
Query: 650 ------RTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDE 703
+ + A G + + E ++ HN + E A + D + + L +E
Sbjct: 595 DIADADQINCKSSAVNGIADMDMGSGAAECASIHNNAGEDAIMTD-----TAMEFYLNNE 649
Query: 704 RISSCK-PIQKDSILKPG--KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQ 760
R I+ D ++ PG K + V++ W DD + Y+ + LP ++K+ ++ Q
Sbjct: 650 RFPDQHFKIEMDQVVTPGLRKRLHVIVCWQDDGLKQYNLDSLDSLPEIYKSVLFARRP-Q 708
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
E SL++CL+AF+ EEPLGP+DMWYCP CKEHRQA+KKLDLW LP++L+ HLKRFSYSRY
Sbjct: 709 ETCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRY 768
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAY 872
KNKLDTFV+FPI +LDLSK+++ + G+ S Y L+A+SNHYG +GGGHYTAY
Sbjct: 769 TKNKLDTFVDFPIHDLDLSKFVRDRSGQLSNHYQLYAVSNHYGSMGGGHYTAY 821
>gi|218187268|gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indica Group]
Length = 868
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 335/762 (43%), Positives = 455/762 (59%), Gaps = 67/762 (8%)
Query: 122 YVLVPQQVWEKLFCWY-KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRL 180
Y LV ++ K W+ G +K +S + E V ++ + L++ +RD + +++
Sbjct: 104 YALVAADLFSKARAWHIDSGKNAGKKSLS---IEEGSVNIYPIMLRVSVTRDTNALTVKI 160
Query: 181 SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE 240
SKK ++ + +++ K+ + E IWD+ R+T L + DQ++ LE
Sbjct: 161 SKKDNSAENFKRANKILTADSEPVHIWDF--SGRTTFILMNEWNRMPQDTRSSDQEMPLE 218
Query: 241 VQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
+ + + G + + L + ++SNG G MD
Sbjct: 219 IHFYDLSEPTANGTN-------GKKDELALTMSRSMSNGSIMG---------------MD 256
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTEN 360
+D S K GL GL NLGNTCFMNSA+QCL HT L
Sbjct: 257 LDSSGSS-----KQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKL---------------- 295
Query: 361 PLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
GELA +FGDLLRKLW+ R VAPR FKGKLARFAPQFSG+NQHDSQELLAFLLD
Sbjct: 296 -----GELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLD 350
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
GLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD+ QGQYKSTLVCP
Sbjct: 351 GLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVDICQGQYKSTLVCPD 410
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVS+TFDPFMYL+LPLPST RTMT+TVF +G+ P P+TV++ K G K LI ALS
Sbjct: 411 CRKVSVTFDPFMYLSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALS 470
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVN 600
AC LK DE LL+AEVYN + R+ E P+E+IS I+D + +VAY+ + + N
Sbjct: 471 IACSLKGDERLLVAEVYNSALIRYLEEPSEVISLIRDGDRLVAYKLPKDSEDAPIVVFRN 530
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E + + + + S K FG PLV+ L + ++G+ I K+++P R + SS H
Sbjct: 531 QRMESTLTSFGRKS-WKSFGTPLVSSLPDT-INGSTIFELYQKVMTPFRVPKDDSSDADH 588
Query: 659 GGKENGFLPEVIDELSNS---HNESVETAELEDLCSRELSFQLSLTDERISSCK-PIQKD 714
++ + E D NS + S++ + +D E Q +ER + I+ D
Sbjct: 589 IIGKSSPVEETTDVDMNSDATESTSIKNNDCDDETMTEDGMQFYFINERFPDQRMKIEMD 648
Query: 715 SILK---PGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
++ K + V++ W D+ E Y+ S + +LP ++K ++ QE SL++CL+A
Sbjct: 649 QPIRLTASQKRLHVVVCWQDNGLEQYNFSSLDNLPEIYKAVLFSRRP-QETCSLYACLEA 707
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
F+ EEPLGP+DMWYCP CKEHRQA+KKLDLW LP++L+ HLKRFSYSRY KNKL+T V+F
Sbjct: 708 FIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDF 767
Query: 832 PILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAY 872
P+ +LDLSKY+ S+ + S Y L+AISNHYG +GGGHYTAY
Sbjct: 768 PVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGGGHYTAY 809
>gi|222617496|gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japonica Group]
Length = 882
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/777 (43%), Positives = 454/777 (58%), Gaps = 81/777 (10%)
Query: 122 YVLVPQQVWEKLFCWYK---------------GGPALPRKMISEGIVNEKRVEVFXLCLK 166
Y LV ++ K W+ G +K +S + E V ++ + L+
Sbjct: 104 YALVAADLFSKARAWFDPMILSRYIENQSHIDSGKNAGKKSLS---IEEGSVNIYPIMLR 160
Query: 167 LIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTL 226
+ +RD + +++SKK ++ + +++ K+ + E IWD+ R+T L +
Sbjct: 161 VSVTRDTNALTVKISKKDNSAENFKRANKILTSDSEPVHIWDF--SGRTTFILMNEWNRM 218
Query: 227 DDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRF 286
DQ++ LE+ + + G + + L + ++SNG G
Sbjct: 219 PQDTRSSDQEMPLEIHFYDLSEPTANGTN-------GKKDELALTMSRSMSNGSIMG--- 268
Query: 287 NQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQ 346
MD+D S K GL GL NLGNTCFMNSA+QCL HT L
Sbjct: 269 ------------MDLDSSGSS-----KQVGTGLIGLDNLGNTCFMNSAVQCLAHTSKL-- 309
Query: 347 YFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGY 406
GELA +FGDLLRKLW+ R VAPR FKGKLARFAPQFSG+
Sbjct: 310 -------------------GELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGF 350
Query: 407 NQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVD 466
NQHDSQELLAFLLDGLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD
Sbjct: 351 NQHDSQELLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVD 410
Query: 467 VFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
+ QGQYKSTLVCP C KVS+TFDPFMYL+LPLPST RTMT+TVF +G+ P P+TV++
Sbjct: 411 ICQGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSV 470
Query: 527 MKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
K G K LI ALS AC LK DE LL+AEVYN + R+ E P+E+IS I+D + +VAY+
Sbjct: 471 PKSGDTKTLIDALSIACSLKGDERLLVAEVYNSALIRYLEEPSEVISLIRDGDRLVAYKL 530
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS 646
+ + N+ E + + + + S K FG PLV+ L + ++G+ I K+++
Sbjct: 531 PKDSEDAPIVVFRNQRMESTLTSFGRKS-WKSFGTPLVSSLPDT-INGSTIFELYQKVMT 588
Query: 647 PLR--RTYSSAKAHGGKENGFLPEVIDELSNS---HNESVETAELEDLCSRELSFQLSLT 701
P R + SS H ++ + E D NS + S+ + +D E Q
Sbjct: 589 PFRVPKDDSSGADHIIGKSSPVEETTDVDMNSDATESTSINNNDCDDETMTEDGMQFYFI 648
Query: 702 DERISSCK-PIQKDSILK---PGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK 757
+ER + I+ D ++ K + V++ W D+ E Y+ S + +LP ++K ++
Sbjct: 649 NERFPDQRMKIEMDQPIRLTASQKRLHVVVCWQDNGLEQYNFSSLDNLPEIYKAVLFSRR 708
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
QE SL++CL+AF+ EEPLGP+DMWYCP CKEHRQA+KKLDLW LP++L+ HLKRFSY
Sbjct: 709 P-QETCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSY 767
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
SRY KNKL+T V+FP+ +LDLSKY+ S+ + S Y L+AISNHYG +GGGHYTAY
Sbjct: 768 SRYTKNKLETCVDFPVHDLDLSKYIGSRGQQISNHYRLYAISNHYGSMGGGHYTAYV 824
>gi|297613547|ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group]
gi|255670491|dbj|BAF30317.2| Os12g0621000 [Oryza sativa Japonica Group]
Length = 864
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/759 (43%), Positives = 449/759 (59%), Gaps = 65/759 (8%)
Query: 122 YVLVPQQVWEKLFCWY-KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRL 180
Y LV ++ K W+ G +K +S + E V ++ + L++ +RD + +++
Sbjct: 104 YALVAADLFSKARAWHIDSGKNAGKKSLS---IEEGSVNIYPIMLRVSVTRDTNALTVKI 160
Query: 181 SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE 240
SKK ++ + +++ K+ + E IWD+ R+T L + DQ++ LE
Sbjct: 161 SKKDNSAENFKRANKILTSDSEPVHIWDF--SGRTTFILMNEWNRMPQDTRSSDQEMPLE 218
Query: 241 VQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
+ + + G + + L + ++SNG G MD
Sbjct: 219 IHFYDLSEPTANGTN-------GKKDELALTMSRSMSNGSIMG---------------MD 256
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTEN 360
+D S GL GL NLGNTCFMNSA+QCL HT L
Sbjct: 257 LDSSGSSKQVGT-----GLIGLDNLGNTCFMNSAVQCLAHTSKL---------------- 295
Query: 361 PLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
GELA +FGDLLRKLW+ R VAPR FKGKLARFAPQFSG+NQHDSQELLAFLLD
Sbjct: 296 -----GELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLD 350
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
GLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD+ QGQYKSTLVCP
Sbjct: 351 GLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVDICQGQYKSTLVCPD 410
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVS+TFDPFMYL+LPLPST RTMT+TVF +G+ P P+TV++ K G K LI ALS
Sbjct: 411 CRKVSVTFDPFMYLSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALS 470
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVN 600
AC LK DE LL+AEVYN + R+ E P+E+IS I+D + +VAY+ + + N
Sbjct: 471 IACSLKGDERLLVAEVYNSALIRYLEEPSEVISLIRDGDRLVAYKLPKDSEDAPIVVFRN 530
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E + + + + S K FG PLV+ L + ++G+ I K+++P R + SS H
Sbjct: 531 QRMESTLTSFGRKS-WKSFGTPLVSSLPDT-INGSTIFELYQKVMTPFRVPKDDSSGADH 588
Query: 659 GGKENGFLPEVIDELSNS---HNESVETAELEDLCSRELSFQLSLTDERISSCK-PIQKD 714
++ + E D NS + S+ + +D E Q +ER + I+ D
Sbjct: 589 IIGKSSPVEETTDVDMNSDATESTSINNNDCDDETMTEDGMQFYFINERFPDQRMKIEMD 648
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
++ K L D+ E Y+ S + +LP ++K ++ QE SL++CL+AF+
Sbjct: 649 QPIRLTASQK-RLHVVDNGLEQYNFSSLDNLPEIYKAVLFSRRP-QETCSLYACLEAFIK 706
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
EEPLGP+DMWYCP CKEHRQA+KKLDLW LP++L+ HLKRFSYSRY KNKL+T V+FP+
Sbjct: 707 EEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVH 766
Query: 835 NLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAY 872
+LDLSKY+ S+ + S Y L+AISNHYG +GGGHYTAY
Sbjct: 767 DLDLSKYIGSRGQQISNHYRLYAISNHYGSMGGGHYTAY 805
>gi|110741704|dbj|BAE98798.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 582
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/558 (53%), Positives = 375/558 (67%), Gaps = 29/558 (5%)
Query: 331 MNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
MNS+LQCL HTP L +FLG+YS EIN +NPLGM GE+ALAFGDLLR LW+ G + VAPR
Sbjct: 1 MNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPR 60
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD GRPD EVA+
Sbjct: 61 TFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVAD 120
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+NH ARNDS+IVDV QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP T RTM +TV
Sbjct: 121 EYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTV 180
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++I RF E P +
Sbjct: 181 MSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTD 240
Query: 571 LISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KLFGAPLVTYL 627
++ I+D + +V YR + ++ +K ++ G K FG PLV+ L
Sbjct: 241 SLTLIRDGDKLVVYRLKKDANNS---PLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRL 297
Query: 628 EEEHLSGADIDIAVSKLLSPLR----------RTYSSAKAHGGKENGFLPEVIDELSNSH 677
+ +G+D++ KLLS + + + +A + V D S
Sbjct: 298 CDVE-NGSDVENLYLKLLSSFKMPTEFFTENLKNPTEEEATDKTDTDGTTSVEDTNSTDV 356
Query: 678 NESVETAELEDLCSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHEL 736
E+ E+ L D R L LTD+R +S + + K+ + K + VL W ++
Sbjct: 357 KETTES--LPDPVLR-----LYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKELDV 409
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
YD + LP V K+G K QE++SLF CL+AFLTEEPLGPDDMWYCP CKEHRQA
Sbjct: 410 YDTCLLSSLPEVSKSG---TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAI 466
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLF 855
KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ NLDLS Y+ K+G+ +Y Y L+
Sbjct: 467 KKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLY 526
Query: 856 AISNHYGGLGGGHYTAYA 873
AISNHYG +GGGHYTAY
Sbjct: 527 AISNHYGSMGGGHYTAYV 544
>gi|297606766|ref|NP_001058936.2| Os07g0160000 [Oryza sativa Japonica Group]
gi|255677531|dbj|BAF20850.2| Os07g0160000 [Oryza sativa Japonica Group]
Length = 911
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/786 (41%), Positives = 455/786 (57%), Gaps = 76/786 (9%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP ++ AL K E + L L+ I R+ S +++S
Sbjct: 101 YALVPADELSRVLARQNSSLALHNKHS----FAEDSAGAYPLVLR-ISVRETSILTVKIS 155
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + + Y++ K+ I+ + +WD F+ Q + ++ +++ D ++IL EV
Sbjct: 156 KKDNPVENYKRAYKIFNIDSQPVHVWD-FSGQTNLILMNEWNRSNHDCCHSELENIL-EV 213
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV S S + GG + + N MD+
Sbjct: 214 QV-----------------YAMSDSLTSKIGGTSKEYTEQSSADVND----------MDV 246
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D Y S+ + GL GL+NLGNTCFMNS++QCL HT L YFLGDY +IN NP
Sbjct: 247 DLSYGSFG---RSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNP 303
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR+LW++ R V+P FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 304 LGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDG 363
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN+VK KPY E KD+ GRPD+EVA+E W NH ARNDS+IVD + GQYKSTL CP C
Sbjct: 364 LHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTC 423
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PST RTMTVTVF +GS P+ + VT+ + G DL+ ALS+
Sbjct: 424 SKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSS 483
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK-QGGKIKLEIVN 600
AC L DE LL+ EVYN++I R+ E P++ +S ++D + + A+R RK + + +
Sbjct: 484 ACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQ 543
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E+S+ D + + K F APL+ L E +G + KLL PLR ++ SS
Sbjct: 544 YFDERSSIDNIT-PQMKEFEAPLLAVLPER-ANGLTLKNIYLKLLEPLRFSKSTSSLNDS 601
Query: 659 GGKENGFLPEVIDEL----------------SNSHNESVETAELE-------------DL 689
G +G ++D +S +E++E E D
Sbjct: 602 GRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDR 661
Query: 690 CSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKVLLD--WTDDVHELYDPSYIKDLP 746
+ F+ L + R + IQ D + ++L++ W + YD S +K LP
Sbjct: 662 EAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLP 721
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+HK + K +++++L CL+AFL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+
Sbjct: 722 EIHKLEL-IPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE 780
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYV-YDLFAISNHYGGLG 865
VLV HLKRFSY+++ +NKL+TFV+FPI +LDLS Y+ K S Y L+AISNHYG +G
Sbjct: 781 VLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMG 840
Query: 866 GGHYTA 871
GGHYTA
Sbjct: 841 GGHYTA 846
>gi|218199123|gb|EEC81550.1| hypothetical protein OsI_24972 [Oryza sativa Indica Group]
Length = 885
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/786 (41%), Positives = 455/786 (57%), Gaps = 76/786 (9%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP ++ AL K E + L L+ I R+ S +++S
Sbjct: 101 YALVPADELSRVLARQNSSLALHNKHS----FAEDSAGAYPLVLR-ISVRETSILTVKIS 155
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + + Y++ K+ I+ + +WD F+ Q + ++ +++ D ++IL EV
Sbjct: 156 KKDNPVENYKRAYKIFNIDSQPVHVWD-FSGQTNLILMNEWNRSNHDCCHSELENIL-EV 213
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV S S + GG + + N MD+
Sbjct: 214 QV-----------------YAMSDSLTSKIGGTSKEYTEQSSADVND----------MDV 246
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D Y S+ + GL GL+NLGNTCFMNS++QCL HT L YFLGDY +IN NP
Sbjct: 247 DLSYGSFG---RSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNP 303
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR+LW++ R V+P FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 304 LGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDG 363
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN+VK KPY E KD+ GRPD+EVA+E W NH ARNDS+IVD + GQYKSTL CP C
Sbjct: 364 LHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTC 423
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PST RTMTVTVF +GS P+ + VT+ + G DL+ ALS+
Sbjct: 424 SKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSS 483
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK-QGGKIKLEIVN 600
AC L DE LL+ EVYN++I R+ E P++ +S ++D + + A+R RK + + +
Sbjct: 484 ACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQ 543
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E+S+ D + + K F APL+ L E +G + KLL PLR ++ SS
Sbjct: 544 YFDERSSIDNIT-PQMKEFEAPLLAVLPER-ANGLTLKNIYLKLLEPLRFSKSTSSLNDS 601
Query: 659 GGKENGFLPEVIDEL----------------SNSHNESVETAELE-------------DL 689
G +G ++D +S +E++E E D
Sbjct: 602 GRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDR 661
Query: 690 CSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKVLLD--WTDDVHELYDPSYIKDLP 746
+ F+ L + R + IQ D + ++L++ W + YD S +K LP
Sbjct: 662 EAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLP 721
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+HK + K +++++L CL+AFL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+
Sbjct: 722 EIHKLEL-IPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE 780
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYV-YDLFAISNHYGGLG 865
VLV HLKRFSY+++ +NKL+TFV+FPI +LDLS Y+ K S Y L+AISNHYG +G
Sbjct: 781 VLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMG 840
Query: 866 GGHYTA 871
GGHYTA
Sbjct: 841 GGHYTA 846
>gi|222636464|gb|EEE66596.1| hypothetical protein OsJ_23160 [Oryza sativa Japonica Group]
Length = 885
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/786 (41%), Positives = 455/786 (57%), Gaps = 76/786 (9%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP ++ AL K E + L L+ I R+ S +++S
Sbjct: 101 YALVPADELSRVLARQNSSLALHNKHS----FAEDSAGAYPLVLR-ISVRETSILTVKIS 155
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + + Y++ K+ I+ + +WD F+ Q + ++ +++ D ++IL EV
Sbjct: 156 KKDNPVENYKRAYKIFNIDSQPVHVWD-FSGQTNLILMNEWNRSNHDCCHSELENIL-EV 213
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV S S + GG + + N MD+
Sbjct: 214 QV-----------------YAMSDSLTSKIGGTSKEYTEQSSADVND----------MDV 246
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D Y S+ + GL GL+NLGNTCFMNS++QCL HT L YFLGDY +IN NP
Sbjct: 247 DLSYGSFG---RSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNP 303
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR+LW++ R V+P FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 304 LGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDG 363
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN+VK KPY E KD+ GRPD+EVA+E W NH ARNDS+IVD + GQYKSTL CP C
Sbjct: 364 LHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTC 423
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PST RTMTVTVF +GS P+ + VT+ + G DL+ ALS+
Sbjct: 424 SKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSS 483
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK-QGGKIKLEIVN 600
AC L DE LL+ EVYN++I R+ E P++ +S ++D + + A+R RK + + +
Sbjct: 484 ACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQ 543
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E+S+ D + + K F APL+ L E +G + KLL PLR ++ SS
Sbjct: 544 YFDERSSIDNIT-PQMKEFEAPLLAVLPER-ANGLTLKNIYLKLLEPLRFSKSTSSLNDS 601
Query: 659 GGKENGFLPEVIDEL----------------SNSHNESVETAELE-------------DL 689
G +G ++D +S +E++E E D
Sbjct: 602 GRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDR 661
Query: 690 CSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKVLLD--WTDDVHELYDPSYIKDLP 746
+ F+ L + R + IQ D + ++L++ W + YD S +K LP
Sbjct: 662 EAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLP 721
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+HK + K +++++L CL+AFL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+
Sbjct: 722 EIHKLEL-IPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE 780
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYV-YDLFAISNHYGGLG 865
VLV HLKRFSY+++ +NKL+TFV+FPI +LDLS Y+ K S Y L+AISNHYG +G
Sbjct: 781 VLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMG 840
Query: 866 GGHYTA 871
GGHYTA
Sbjct: 841 GGHYTA 846
>gi|22831079|dbj|BAC15941.1| putative ubiquitin C-terminal hydrolase [Oryza sativa Japonica
Group]
Length = 951
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 330/786 (41%), Positives = 455/786 (57%), Gaps = 76/786 (9%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP ++ AL K E + L L+ I R+ S +++S
Sbjct: 101 YALVPADELSRVLARQNSSLALHNKHS----FAEDSAGAYPLVLR-ISVRETSILTVKIS 155
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + + Y++ K+ I+ + +WD F+ Q + ++ +++ D ++IL EV
Sbjct: 156 KKDNPVENYKRAYKIFNIDSQPVHVWD-FSGQTNLILMNEWNRSNHDCCHSELENIL-EV 213
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV S S + GG + + N MD+
Sbjct: 214 QV-----------------YAMSDSLTSKIGGTSKEYTEQSSADVND----------MDV 246
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D Y S+ + GL GL+NLGNTCFMNS++QCL HT L YFLGDY +IN NP
Sbjct: 247 DLSYGSFG---RSSSHGLIGLENLGNTCFMNSSIQCLAHTSKLVDYFLGDYDRDINRTNP 303
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR+LW++ R V+P FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 304 LGLNGELALAFGELLRRLWNTERKPVSPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDG 363
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN+VK KPY E KD+ GRPD+EVA+E W NH ARNDS+IVD + GQYKSTL CP C
Sbjct: 364 LHEDLNQVKCKPYEEAKDASGRPDKEVADEYWSNHLARNDSVIVDTYHGQYKSTLTCPTC 423
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PST RTMTVTVF +GS P+ + VT+ + G DL+ ALS+
Sbjct: 424 SKTSVTFDPFMYLSLPVPSTAKRTMTVTVFSTDGSIEPISYDVTVPQFGSLNDLVQALSS 483
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK-QGGKIKLEIVN 600
AC L DE LL+ EVYN++I R+ E P++ +S ++D + + A+R RK + + +
Sbjct: 484 ACSLGDDEILLITEVYNNRILRYLEEPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQ 543
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAH 658
+ E+S+ D + + K F APL+ L E +G + KLL PLR ++ SS
Sbjct: 544 YFDERSSIDNIT-PQMKEFEAPLLAVLPER-ANGLTLKNIYLKLLEPLRFSKSTSSLNDS 601
Query: 659 GGKENGFLPEVIDEL----------------SNSHNESVETAELE-------------DL 689
G +G ++D +S +E++E E D
Sbjct: 602 GRCNSGCAAVMMDATPDSDSKFQSAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDR 661
Query: 690 CSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKVLLD--WTDDVHELYDPSYIKDLP 746
+ F+ L + R + IQ D + ++L++ W + YD S +K LP
Sbjct: 662 EAHMEEFEFYLINGRGEFQQTRIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLP 721
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+HK + K +++++L CL+AFL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+
Sbjct: 722 EIHKLEL-IPKGNEDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE 780
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYV-YDLFAISNHYGGLG 865
VLV HLKRFSY+++ +NKL+TFV+FPI +LDLS Y+ K S Y L+AISNHYG +G
Sbjct: 781 VLVIHLKRFSYTQFTRNKLETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMG 840
Query: 866 GGHYTA 871
GGHYTA
Sbjct: 841 GGHYTA 846
>gi|224088124|ref|XP_002308332.1| predicted protein [Populus trichocarpa]
gi|222854308|gb|EEE91855.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/589 (50%), Positives = 378/589 (64%), Gaps = 22/589 (3%)
Query: 303 DGYDSYNTAKKGEKG---------GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS 353
D SY++ + + G GL GLQNLGNTCFMNSA+QCL HTP L YFLGDY
Sbjct: 6 DHVRSYSSLRNSQSGSGFRVFGYLGLRGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYG 65
Query: 354 DEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
EIN EN LG GELALAFGDLL KLW+ VAP FK KLA FAPQFSGYNQHDSQE
Sbjct: 66 KEINQENLLGTKGELALAFGDLLSKLWTPRDTPVAPAIFKRKLADFAPQFSGYNQHDSQE 125
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
L+FLLDGLHEDLNRVK KPYI +KD+ GR DE VA E W+NH ARNDS+IVD+ QGQY+
Sbjct: 126 FLSFLLDGLHEDLNRVKSKPYIAIKDAEGRLDEVVAEEYWRNHLARNDSIIVDLCQGQYQ 185
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
STLVCP C+K S+TFDPFMYL+LPLPST RTMT+TV +G LP P TVT+ K G K
Sbjct: 186 STLVCPACNKKSVTFDPFMYLSLPLPSTTMRTMTLTVLSTDGMNLPTPITVTVPKCGRQK 245
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
DLI ALS AC L+ DE L++ E+Y ++IFR P++ ++ I+D++ +VAYR +
Sbjct: 246 DLIEALSIACSLRNDEMLMVVEIYKNRIFRRLTEPSDSVALIRDEDKLVAYRLLKDNRNS 305
Query: 594 IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYS 653
+ ++ E+ KLFG P V LE + +G D+ KLLSPL
Sbjct: 306 PMVVFMHERVERPCEFERAIPNLKLFGIPFVARLENLY-TGFDLHKQYLKLLSPLLMPAD 364
Query: 654 SA------KAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD-ERIS 706
A E+ + +V+ + N +T +D CS FQ L D R +
Sbjct: 365 DALNDYDDVGITTNEDSTMEDVVCPTISDSNTGSDTGTEDDQCSSS-DFQFYLKDGMRST 423
Query: 707 SCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
K + + K +++V + W++ + E YD + LP V K ++ QE++SL+
Sbjct: 424 EIKMNEPLPVPKFSDNLEVYVTWSESMIEKYDTCLLSSLPEVLKPQLYARRP-QESVSLY 482
Query: 767 SCLDAFLTEEPLGPDDMWY--CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
CL+AFL EEPLGP+DMW CP CK+ RQA KKLDLW LP++LV HLKRFSYSRY++NK
Sbjct: 483 KCLEAFLKEEPLGPEDMWLVDCPSCKKPRQARKKLDLWRLPEILVVHLKRFSYSRYIRNK 542
Query: 825 LDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAY 872
L+T+V+FPI + DLS Y KD + S Y L+AISNH+GG+G GHY A+
Sbjct: 543 LETYVDFPIDDFDLSTYTSKKDSQFSNHYVLYAISNHHGGMGCGHYDAF 591
>gi|414868202|tpg|DAA46759.1| TPA: hypothetical protein ZEAMMB73_550567 [Zea mays]
Length = 525
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/508 (54%), Positives = 362/508 (71%), Gaps = 20/508 (3%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI + + SCLPCT EER++V L +++ ++K G+L +L+S W+ W+ Y
Sbjct: 1 MTIPSAEGFL--QASSCLPCTATEEREVVDALTKEAEKNVKHGDLRYLVSQSWWMEWQGY 58
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII--QNGNGSSEGDDLEVRRNLEE 118
V + N + RPG IDNS ++ + NGS E E++R L E
Sbjct: 59 V-----GLVNYGESGTEQ---FPQATNRPGEIDNSKLVLAERINGSEEP---ELQRTLRE 107
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRV-EVFXLCLKLIDSRDNSQTV 177
G+ Y LVPQ+VW++L+ WYKGGP +PRK+I + ++ V +V+ LCLKLID+RD+S+ V
Sbjct: 108 GEHYTLVPQEVWQRLYEWYKGGPEIPRKVIFDNPTDKTYVVDVYPLCLKLIDARDDSEKV 167
Query: 178 IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDI 237
R+S+KA +LY VC L +EQ + IWDY+ + + + +D TL++A L MDQ+I
Sbjct: 168 FRISRKAKVHELYSMVCSLMSVEQSEIVIWDYYRRTKGKELTNQND-TLEEAQLSMDQEI 226
Query: 238 LLEVQV---DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSF 294
LLE+++ +G S ST ++LAL+P+EPS SS +IAGGP SNG ++G + +SF
Sbjct: 227 LLEMKLGGGSSGFSARSTNDELALIPLEPSTSSFSIAGGPTFSNGFSSGIGSSFSQDNSF 286
Query: 295 GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD 354
D +DGY+S + K + GL+GL NLGNTCFMNSA+Q LVHTP L QYFL DY+
Sbjct: 287 SPLLRDGEDGYNSLSNGTKDDTHGLSGLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTC 346
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
EIN ENPLG+ GELA+AFG+LLRKLWSSGR ++APRAFK KL+RFAPQFSGYNQHDSQEL
Sbjct: 347 EINKENPLGLQGELAIAFGELLRKLWSSGRTSIAPRAFKSKLSRFAPQFSGYNQHDSQEL 406
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLNRVK+KPYIE KD+ GRPD+E A ECW HKARNDS+IVD FQGQYKS
Sbjct: 407 LAFLLDGLHEDLNRVKEKPYIEAKDADGRPDDEFAEECWNYHKARNDSIIVDKFQGQYKS 466
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTV 502
TLVCPVC+K+S+TFDPFMYL+LPLPSTV
Sbjct: 467 TLVCPVCNKISVTFDPFMYLSLPLPSTV 494
>gi|414883586|tpg|DAA59600.1| TPA: hypothetical protein ZEAMMB73_544083 [Zea mays]
Length = 874
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 326/790 (41%), Positives = 449/790 (56%), Gaps = 88/790 (11%)
Query: 120 QDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR 179
+ Y LVP + G L K G + L L+ I R+ S ++
Sbjct: 96 RSYALVPADELSRALARQNSGLGLQNKHSFAG----DSAGAYPLVLR-ISVRETSILTLK 150
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
+SKK + + Y++ K+ ++ + +WD F+ Q + ++ ++ D DQ+ LL
Sbjct: 151 ISKKDNPFENYKRANKIFNVDSQPVHVWD-FSGQTNLILMNEWNRLHD--CCHADQENLL 207
Query: 240 EVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS-TF 298
EVQV S S + GG N +G +
Sbjct: 208 EVQV-----------------YAMSDSLTSKIGGTNKEN---------------YGDISD 235
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINT 358
M+ D Y S+ A GL GL+NLGNTCFMNS++QCL HTP L +YFLGDY+ IN
Sbjct: 236 MNSDSSYRSFGRAGSM---GLIGLENLGNTCFMNSSIQCLAHTPKLVEYFLGDYAKNINR 292
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPLG++GELALAFG+LLR LW++ V P FK K+A FAPQF G+NQHDSQELLAFL
Sbjct: 293 TNPLGLNGELALAFGELLRSLWTTDGKPVPPHYFKEKIACFAPQFGGFNQHDSQELLAFL 352
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLN+VK KPY E KD+ GRPDEEVA+E W NH ARNDS+IVD GQYKSTL C
Sbjct: 353 LDGLHEDLNQVKCKPYEEAKDASGRPDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTC 412
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P CSK S+TFDPFMYL+LP+PST R MTVTVF +GS P + V++ K G DL+ A
Sbjct: 413 PTCSKTSVTFDPFMYLSLPVPSTAKRVMTVTVFSTDGSREPCSYDVSVPKFGTLSDLVQA 472
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEI 598
LS C L DE LL+ EVYN+ I R+ E P++ +S ++D + + AYR ++ +
Sbjct: 473 LSIVCLLGDDEILLVTEVYNNCIIRYLEEPSDSVSLLRDGDKLAAYRLPKRHEKSPLVVF 532
Query: 599 VNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH 658
++ + +SD + + F APL+ L EE +SG + KLLSP + + ++ +
Sbjct: 533 THQHFVQHSSDGNLTPQMREFEAPLLAALPEE-ISGLSLQDIYLKLLSPFQLSNGASSLN 591
Query: 659 GGKENGFLPEVIDELSNSHNESVETAELED-----LCS---------------------- 691
E+ + +D S+S + + + ++LED CS
Sbjct: 592 DCMESN--SDSVDTPSDSGSINFQNSQLEDGPESNHCSASECEVTKGPDDLYDGVSGSNK 649
Query: 692 -RELSFQLSLTDERISSCKPIQKDSI--------LKPGKHIKVLLDWTDDVHELYDPSYI 742
+ F+ L ER + QK I P + + V + W + Y S +
Sbjct: 650 EAHMDFEFYLKSERGEGQQ--QKIEINELHLLLETAPSR-LHVNVHWLQNASRKYATSML 706
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
+LP +HK K T +++++L CL+AFL EEPLGP+DMWYCP+CK+H+QA KKLDLW
Sbjct: 707 NNLPEIHKLELIPKGT-EDSVALHGCLEAFLKEEPLGPEDMWYCPRCKKHQQAMKKLDLW 765
Query: 803 MLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHY 861
LP+VLV HLKRFSY+++ +NKL+TFV+FP ++LDLS Y+ K + S Y L+A+SNHY
Sbjct: 766 RLPEVLVIHLKRFSYTQFTRNKLETFVDFPTVDLDLSSYVADKSEQPSSHYRLYAVSNHY 825
Query: 862 GGLGGGHYTA 871
G +GGGHYTA
Sbjct: 826 GNMGGGHYTA 835
>gi|242042990|ref|XP_002459366.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
gi|241922743|gb|EER95887.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
Length = 867
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 324/787 (41%), Positives = 443/787 (56%), Gaps = 93/787 (11%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP + G L K G + L L+ I R+ S +++S
Sbjct: 98 YALVPADELSRALARQNSGLGLQNKHSFAG----DSAGAYPLVLR-ISVRETSILTLKIS 152
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + + Y++ K+ ++ + +WD F+ Q + ++ ++ D DQ+ LLEV
Sbjct: 153 KKDNPVENYKRANKIFNVDSQPVHVWD-FSGQTNLILMNEWNRLHD--CCHADQENLLEV 209
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV Y + S G M+
Sbjct: 210 QV----------------------------------------YAMSDSLTSKIGGD-MNS 228
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D Y S+ A GL GL+NLGNTCFMNS++QCL HTP L YFLGDY++ IN NP
Sbjct: 229 DLSYRSFGRAGSM---GLIGLENLGNTCFMNSSIQCLAHTPKLVDYFLGDYANNINRTNP 285
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR LW+ R + P FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 286 LGLNGELALAFGELLRSLWTD-RKPIPPHHFKEKIACFAPQFSGFNQHDSQELLAFLLDG 344
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN+VK KPY E KD+ GRPDEEVA+E W NH ARNDS+IVD GQYKSTL CP C
Sbjct: 345 LHEDLNQVKCKPYEEAKDASGRPDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTCPTC 404
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PST R MTVTVF +GS P + V++ K G DL+ ALS
Sbjct: 405 SKTSVTFDPFMYLSLPVPSTAKRVMTVTVFSTDGSREPCSYDVSVPKFGTLSDLVQALSI 464
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
AC L DE LL+ EVYN+ I R+ E P++ +S ++D + + AYR ++ + ++
Sbjct: 465 ACLLGDDEILLVTEVYNNCIIRYLEEPSDSVSLLRDGDKLAAYRLPKRHEKSPFVVFTHQ 524
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT---------- 651
+ ++ +SD + + F APL+ L E ++G + KLLSP R +
Sbjct: 525 YFDEHSSDDNLTRQMREFEAPLLAALPET-INGLSLQDIYLKLLSPFRLSNRAGSLNVCM 583
Query: 652 --------YSSAKAHGGKENGFLPEVIDELSNSHNESVETAEL----EDLC--------- 690
+ A + N F ++ S + S E+ +DLC
Sbjct: 584 ESNSDSIDLTDATSSDSGSNSFQNSQSEDGPESSHCSASECEIMKRPDDLCDGGSDSNKE 643
Query: 691 SRELSFQLSLTDER----ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLP 746
++ F+ L +ER + + + D + + V + W + + Y S + +LP
Sbjct: 644 AQMEEFEFYLKNERGDGQLQKIEINELDLLETAPSRLHVNVHWLRNASKKYATSMLSNLP 703
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+HK K T +++++L CL+AFL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+
Sbjct: 704 EIHKLELIPKGT-EDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPE 762
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGL 864
VLV HLKRFSY+++ +NKL+TFV+FP +LDLS Y+ KSK S+ Y L+AISNHYG +
Sbjct: 763 VLVIHLKRFSYTQFTRNKLETFVDFPTTDLDLSSYIADKSKQPSSH-YRLYAISNHYGNM 821
Query: 865 GGGHYTA 871
GGGHYTA
Sbjct: 822 GGGHYTA 828
>gi|326529625|dbj|BAK04759.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 884
Score = 544 bits (1401), Expect = e-151, Method: Compositional matrix adjust.
Identities = 334/821 (40%), Positives = 455/821 (55%), Gaps = 115/821 (14%)
Query: 108 DDLEVRRNLEEG--QDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCL 165
D E R + G + Y LVP + AL K E + L L
Sbjct: 84 DRGECRASATSGGSRSYALVPADELSRALARQNSSLALHNKHS----FAEDSAGAYPLVL 139
Query: 166 KLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQT 225
+ I R+ S +++SKK + Y++ K+ I+ + +WD F+ Q + ++ +++
Sbjct: 140 R-ISVRETSILTVKISKKDNPVDNYKRANKMFNIDSQPVHVWD-FSGQTNLILMNEWNRS 197
Query: 226 LDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYR 285
D +Q+ LLEVQV Y
Sbjct: 198 HQD-YCHSEQENLLEVQV----------------------------------------YA 216
Query: 286 FNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLA 345
+ G T M++D ++ + GL GL+NLGNTCFMNS++QCL HT L
Sbjct: 217 MSDSLTFKIGGTSMNVDMSCGNFG---RVSAMGLIGLENLGNTCFMNSSIQCLAHTTKLV 273
Query: 346 QYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSG 405
YFLGDY +IN NPLG++GELAL FG+LLR LW++ R VAP FK K+A FAPQFSG
Sbjct: 274 DYFLGDYDSDINQTNPLGLNGELALTFGELLRSLWTNDRNTVAPHNFKAKIACFAPQFSG 333
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
+NQHDSQELLAFLLDGLHEDLN+VK KPY E KD+ GRPDEEVA+E W+NH ARNDS+IV
Sbjct: 334 FNQHDSQELLAFLLDGLHEDLNQVKYKPYEEAKDASGRPDEEVADEYWRNHLARNDSVIV 393
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
D GQYKSTL CP CSK S+TFDPFMYL+LP+PS RTMTVTVF +GS P + V+
Sbjct: 394 DTCHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSMAKRTMTVTVFSTDGSREPFSYDVS 453
Query: 526 LMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR 585
+ K G DL+ ALS AC L DE LL+ EVYN+ I R+ E P++ +S ++D + + AYR
Sbjct: 454 VPKFGTLSDLVQALSAACSLGGDESLLITEVYNNCIIRYLEEPSDSVSLLRDGDKLAAYR 513
Query: 586 FDRKQGGKIKLEIVN--RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSK 643
KQ K L + + E S D + K F APL+ L E ++G + K
Sbjct: 514 LP-KQYEKSPLVVFTHKHFAEHSGVDNFVTPQMKDFEAPLLAPLPEP-VNGLTLQEIYLK 571
Query: 644 LLSPLR--RTYSSAKAHG-GKENGFL----------PEVIDELSNSHNESVETAELEDLC 690
LL+P R +T S + G G + + ++D +S + +V +A+LED
Sbjct: 572 LLNPFRFSKTISLSTDCGRGSSDCAVYLMDAAGDCAVNLMDVTPSSSDGNVHSAQLEDGP 631
Query: 691 SREL------------------------------SFQLSLTDERISSCKPIQKDSI---- 716
R F LT+ER +Q+ I
Sbjct: 632 ERNQCNDNSCEVMEGSSEAYCGETDVFDKEAQTEQFGFYLTNER----DDVQRTRIEMND 687
Query: 717 -----LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
P + + V ++W + YD S + +LP +HK +K T +++++L CL+A
Sbjct: 688 LDLLDTTPSR-LHVSVNWQHSASKQYDISMLNNLPEIHKLEVILKGT-EDSVALQGCLEA 745
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
FL EEPLGP+DMWYCP CK+H+QA KKLDLW LP+VLV HLKRFSY+++ +NKL+TFV+F
Sbjct: 746 FLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDF 805
Query: 832 PILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTA 871
PI +LDLS Y+ +++ + + Y L+AISNHYG +GGGHYTA
Sbjct: 806 PISDLDLSSYIATENEQPNKHYRLYAISNHYGNMGGGHYTA 846
>gi|449437492|ref|XP_004136526.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Cucumis sativus]
Length = 602
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 289/569 (50%), Positives = 377/569 (66%), Gaps = 19/569 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
GL GLQNLGNTCFMNSALQCLVHTP L YFLG++ EIN +NPLGM GELALAFGDLLR
Sbjct: 2 GLTGLQNLGNTCFMNSALQCLVHTPKLVDYFLGNFQKEINYDNPLGMKGELALAFGDLLR 61
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ G +V PR FK KLA FAPQFSGYNQHDSQE L+FLLDGLHEDLNRVK KPY E
Sbjct: 62 KLWAPGSKSVPPRMFKLKLANFAPQFSGYNQHDSQEFLSFLLDGLHEDLNRVKCKPYFEA 121
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
KD GR DEEVA E W+NH ARNDS+IVD+ QGQY+STLVCP C+K+S+TFDPFMYL+LP
Sbjct: 122 KDVEGRRDEEVAEEYWQNHLARNDSIIVDLCQGQYRSTLVCPACNKLSVTFDPFMYLSLP 181
Query: 498 LPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVY 557
LPST R+MT+ V +G LP FTV++ K G KDLI ALSTAC L+ DE LLLAEVY
Sbjct: 182 LPSTTMRSMTLMVISCDGISLPSTFTVSVPKSGRLKDLIDALSTACSLRADETLLLAEVY 241
Query: 558 NHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERK 617
++I R E+P++ ++ I++++ +VAYRF R + + +++ E + S K
Sbjct: 242 KNRICRVLEDPSDSLALIRNEDKLVAYRFPRDEESSKLIVYMHQQSETHDNSGKLISGSK 301
Query: 618 LFGAPLVTYLEE-EHLSGADIDIAVSKLLSPLR----RTYSSAKAHGG--------KENG 664
FGAP V + + H S DI K L PL+ ++S+ G ++
Sbjct: 302 TFGAPFVAKVPDLPHES--DIRQLFLKFLDPLKMPAEESFSNCDGEAGVSANDDFEMDDA 359
Query: 665 FLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK 724
P +D + ++E++ + L + L+ Q+ ++ + KP + +I K + +
Sbjct: 360 SDPANLDPDGSPNDETIVNSCLPADFTFYLAHQMGASEGTL--IKPNEPLAISKSTERLD 417
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V++ W D + YD + LP V K ++ QE++ L+ CL+AFL EEPLGPDDMW
Sbjct: 418 VIVMWPDTMVNKYDTCLMSSLPDVSKPNLHPRRL-QESVDLYKCLEAFLKEEPLGPDDMW 476
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YCP+CK+ +QA KKLDLW LP++LV HLKRFSYSR+ KNKL+TFV+FPI ++ Y+ S
Sbjct: 477 YCPRCKKPQQARKKLDLWRLPEILVIHLKRFSYSRFFKNKLETFVDFPIDDVINGLYV-S 535
Query: 845 KDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+ ++ LF G+G GHYTAY
Sbjct: 536 QLKSMQIFYLFXTKFPLEGMGAGHYTAYV 564
>gi|357111554|ref|XP_003557577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 882
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 324/799 (40%), Positives = 442/799 (55%), Gaps = 102/799 (12%)
Query: 122 YVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
Y LVP + AL K G + L L+ I R+ + I++S
Sbjct: 99 YALVPADELSRALARQNSSLALHNKHSFAG----DSAGAYPLVLR-ISVRETNILTIKIS 153
Query: 182 KKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
KK + Y++ K+ I+ + +WD F+ Q + ++ +++ D +Q+ LLEV
Sbjct: 154 KKDNPVDNYKRANKMFNIDSQPVHVWD-FSGQTNLILMNEWNRSHQD-YCHSEQENLLEV 211
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
QV Y + G T M++
Sbjct: 212 QV----------------------------------------YAMSDSLTFKIGGTNMNV 231
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENP 361
D SY + + GL GL+NLGNTCFMNS++QCL HT L YFLGDY +IN NP
Sbjct: 232 DM---SYGSIGRAGSMGLIGLENLGNTCFMNSSIQCLAHTTKLVDYFLGDYDRDINRTNP 288
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG++GELALAFG+LLR LW++ R VAP FK K+A FAPQFSG+NQHDSQELLAFLLDG
Sbjct: 289 LGLNGELALAFGELLRSLWTNDRKQVAPHHFKAKIACFAPQFSGFNQHDSQELLAFLLDG 348
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLN VK KPY E KD+ GRPDEEVA+E W NH ARNDS+IVD GQYKSTL CP C
Sbjct: 349 LHEDLNHVKCKPYEEAKDASGRPDEEVADEYWSNHLARNDSVIVDTCHGQYKSTLTCPTC 408
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SK S+TFDPFMYL+LP+PS R MTVTVF +GS P + V + K G DL+ LS
Sbjct: 409 SKTSVTFDPFMYLSLPVPSMAKRAMTVTVFSTDGSREPFSYDVRVPKFGTLSDLVQVLSA 468
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
AC L+ DE LL+ EVYN++I R+ E P++ IS ++D + + AYR ++ + ++
Sbjct: 469 ACSLRDDETLLVTEVYNNRIIRYLEEPSDSISLLRDGDKLAAYRLPKQYEKSSLVVFTHK 528
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHG-G 660
+ + + + K F APL+ L E +SG ++ KLL PLR + S + G G
Sbjct: 529 YVAEHSGVSNVAPQIKEFEAPLLASLPEI-VSGLTLESIYLKLLYPLRFSKSISSITGCG 587
Query: 661 KENG------------FLPEVIDELSNSHNESVETAELEDLCSREL-------------- 694
NG +++D + + + ++A+ ED R
Sbjct: 588 SCNGDCAVDLMDATGDCAADLMDATPSDSDGNCQSAQSEDGPERSHCDANESEVMEEPSE 647
Query: 695 ----------------SFQLSLTDER--ISSCKPIQKDSIL---KPGKHIKVLLDWTDDV 733
F+ LT+ R + + D L P + + V + W V
Sbjct: 648 SNCGGTAISDKEAHREQFEFYLTNGRDDVQHKRMEMNDLNLLETTPSR-LHVDVHWQHSV 706
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
Y+ S + +LP +HK K T +++++L CL+AFL EEPLGP+DMWYCP CK+H+
Sbjct: 707 ARQYNTSMLNNLPEIHKLELIPKGT-EDSVALHGCLEAFLKEEPLGPEDMWYCPCCKKHQ 765
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVY 852
QA KKLDLW LP+VLV HLKRFSY+++ +NKL+T V+FPI +LDLS Y+ +K + + Y
Sbjct: 766 QAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETSVDFPISDLDLSPYIAAKHEQPNSHY 825
Query: 853 DLFAISNHYGGLGGGHYTA 871
L+AISNHYG +GGGHYTA
Sbjct: 826 HLYAISNHYGNMGGGHYTA 844
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 340/875 (38%), Positives = 473/875 (54%), Gaps = 97/875 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMN---GVSSKRAERPGPIDNSD 96
L+ G+ ++L+ +RW++ W++YV D + F + H N G PGPIDNS
Sbjct: 30 LRPGDSWYLVESRWFKQWKKYVGFDNWDM----FGAGHPNLFPGPVDNAGLFPGPIDNSG 85
Query: 97 IIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI- 152
+ + S ++ +L + DYVLVP + W KL WY G + RK++ G+
Sbjct: 86 LFGDPQTQS------LKEHLIDELDYVLVPTEAWNKLVAWYGCIDGQQPIVRKVVEYGLF 139
Query: 153 VNEKRVEVFXLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQEK-ARIWDYF 210
V +VEV+ L LKL +S D + SK + + +++ KL I EK R+W+ +
Sbjct: 140 VKHYKVEVYLLELKLCESSDPDNVINCHFSKADTVATIEKEMRKLFSIPAEKETRLWNRY 199
Query: 211 NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTI 270
+ L D T+ DA L Q +L+EV+ ++G T
Sbjct: 200 -MSNTYEQLSKLDSTVQDAGLYQGQVVLIEVKNEDG----------------------TW 236
Query: 271 AGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCF 330
G L+ G +G+ N Y + DS + ++ G L GL NLGNTCF
Sbjct: 237 PGQHCLAKG--SGFVCNSY-------------NCRDSASLSQPG----LCGLSNLGNTCF 277
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNSALQCL +TP L YFL D Y EIN NPLGM GE+A A+ DL++++WS ++ VAP
Sbjct: 278 MNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQMWSGRQSHVAP 337
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
R FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD EVA
Sbjct: 338 RMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVA 397
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W+NH+ RNDS+IVD+F G +KSTLVCP CSKVS+TFDPF YLTLPLP R M VT
Sbjct: 398 KEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRPMEVT 457
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
+ YA+ P+ + V + G DL +LS + E +++ +VYNH+ + F+
Sbjct: 458 LVYADPQRRPVQYRVVVPVMGAISDLCESLSKLSGVPA-ENMVVTDVYNHRFHKIFQMDE 516
Query: 570 ELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
L + D+ V + G + + ++EK+ S LFG PL+ + +
Sbjct: 517 GLNPIMPKDDIFVYEVCKPSEDGSEYVTLSIYFREKTMRQSSNTSGTVLFGQPLLISVPK 576
Query: 630 EHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGK---ENGFLPEVIDELSNS----- 676
L+ + V + +S PL YS G NG + I+E+ +
Sbjct: 577 HKLTVDHLYSVVLEQISRCVKLPLAEEYSPPCPDRGTCNGSNGVVEGDIEEMEHQDGGEE 636
Query: 677 -----------HNE---SVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGK 721
H+E VE+A C ++ F SL + S I + ILK
Sbjct: 637 GKEKLTEVDPCHSEGCMQVESARDLQPCKKQ-HFTFSLVNSSGTSEINSIVEGKILKLNA 695
Query: 722 HIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEA-ISLFSCLDAFLTEEPLG 779
V DW + LYD ++ K G ++ +++A ++L C++ F T E LG
Sbjct: 696 FSAVATDWDSETRRLLYDE---QEAQAFEKHGSMLQPQKKKAVVALRDCIELFTTMETLG 752
Query: 780 PDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
D WYCP CK+H+QATKK DLW LP +LV HLKRFSYSRY ++KLDT V FPI L++S
Sbjct: 753 EHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMS 812
Query: 840 KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+++ SYVYDL A+SNHYG +G GHYTAYAK
Sbjct: 813 EFVCDPRAGSYVYDLIAVSNHYGAMGVGHYTAYAK 847
>gi|302775718|ref|XP_002971276.1| hypothetical protein SELMODRAFT_61966 [Selaginella moellendorffii]
gi|300161258|gb|EFJ27874.1| hypothetical protein SELMODRAFT_61966 [Selaginella moellendorffii]
Length = 567
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 298/573 (52%), Positives = 381/573 (66%), Gaps = 58/573 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
GLAGLQNLGNTCFMNSALQCL HTP+L +YFL DY DEIN NPLGM GELA+AFG+L+R
Sbjct: 4 GLAGLQNLGNTCFMNSALQCLAHTPELVEYFLQDYDDEINPANPLGMEGELAVAFGELIR 63
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ GR V PR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK KPYIE+
Sbjct: 64 KLWA-GREVVVPRPFKNKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKSKPYIEV 122
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
KD GRPD EVA+E W HKARN+S+IVD+FQGQYKSTLVCPVC+KVS+TFDPFMYL+LP
Sbjct: 123 KDIDGRPDGEVADEYWAIHKARNNSIIVDLFQGQYKSTLVCPVCAKVSVTFDPFMYLSLP 182
Query: 498 LPSTVT-RTMTVTVFYANGSGLPMPFTVTL--MKHGCCKDLILALSTACCLKIDEGLLLA 554
LP ++ VTVF +GS P TV + K KDLI ALS AC L+ +E L +
Sbjct: 183 LPEKQQLMSVAVTVFSGDGSASPEVHTVQIPGPKQARPKDLIHALSVACTLEENEYLFVV 242
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLK-- 612
EVYN++I+R S+ + + + A+R G KL + + E+ +
Sbjct: 243 EVYNNRIYRVISECPSAPLSLANGDRLAAFRLKSFPGKTTKLILYHGTLEEHVTYEFSCR 302
Query: 613 --GSERKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
G + KL+G+PLVT + E LS GA++ V+K++SPLRR A+ + E
Sbjct: 303 TIGKQFKLYGSPLVTAIPEAGLSEGAELYNLVAKVVSPLRR---EAEVNSSPE------- 352
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI------LKPGKHI 723
+ F+L +TD++ S+ + + P +H
Sbjct: 353 -----------------------DWPFRLFITDDKASTVDLLIDPHMPLPTFNFSPREHR 389
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT-RQEAISLFSCLDAFLTEEPLGPDD 782
++L W+ + Y +++L V T+ + R+E ISL++CL+AF+ EEPLGPDD
Sbjct: 390 YLILVWSPSAKDQYGFKELENLAPV-----TIPDSRRREPISLYACLEAFMREEPLGPDD 444
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
MW+CP+CKEHRQA+KKLDLW LP++LV HLKRFSYSRY NKL+T V+FP+ +LDLSKY+
Sbjct: 445 MWFCPKCKEHRQASKKLDLWRLPEILVVHLKRFSYSRY-SNKLETLVDFPVHDLDLSKYV 503
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+ Y+LFA+SNHYGG+GGGHYTAYAK+
Sbjct: 504 SHRTDP---YELFAVSNHYGGVGGGHYTAYAKL 533
>gi|302756229|ref|XP_002961538.1| hypothetical protein SELMODRAFT_61965 [Selaginella moellendorffii]
gi|300170197|gb|EFJ36798.1| hypothetical protein SELMODRAFT_61965 [Selaginella moellendorffii]
Length = 567
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 297/573 (51%), Positives = 381/573 (66%), Gaps = 58/573 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
GLAGLQNLGNTCFMNSALQCL HTP+L +YFL DY DEIN NPLGM GELA+AFG+L+R
Sbjct: 4 GLAGLQNLGNTCFMNSALQCLAHTPELVEYFLQDYDDEINPANPLGMEGELAVAFGELIR 63
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ GR V PR FK KL+RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK KPYIE+
Sbjct: 64 KLWA-GREVVVPRPFKNKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKSKPYIEV 122
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
KD GRPD EVA+E W HKARN+S+IVD+FQGQYKSTLVCPVC+KVS+TFDPFMYL+LP
Sbjct: 123 KDIDGRPDGEVADEYWAIHKARNNSIIVDLFQGQYKSTLVCPVCAKVSVTFDPFMYLSLP 182
Query: 498 LPSTVT-RTMTVTVFYANGSGLPMPFTVTL--MKHGCCKDLILALSTACCLKIDEGLLLA 554
LP ++ VTVF +GS P TV + K KDLI ALS AC L+ +E L +
Sbjct: 183 LPEKQQLMSVAVTVFSGDGSASPEVHTVQIPGPKQARPKDLIHALSVACTLEENEYLFVV 242
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLK-- 612
EVYN++I+R S+ + + + A+R G KL + + E+ +
Sbjct: 243 EVYNNRIYRVISECPSAPLSLANGDRLAAFRLKSFPGKTTKLILYHGTLEEHVTYEFSCR 302
Query: 613 --GSERKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
G + KL+G+PLVT + E LS GA++ V+K++SPL+R A+ + E
Sbjct: 303 TIGKQFKLYGSPLVTAIPEAGLSEGAELYNLVAKVVSPLKR---EAEVNSSPE------- 352
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI------LKPGKHI 723
+ F+L +TD++ S+ + + P +H
Sbjct: 353 -----------------------DWPFRLFITDDKASTVDLLIDPHMPLPTFNFSPREHR 389
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT-RQEAISLFSCLDAFLTEEPLGPDD 782
++L W+ + Y +++L V T+ + R+E ISL++CL+AF+ EEPLGPDD
Sbjct: 390 YLILVWSPSAKDQYGFKELENLAPV-----TIPDSRRREPISLYACLEAFMREEPLGPDD 444
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
MW+CP+CKEHRQA+KKLDLW LP++LV HLKRFSYSRY NKL+T V+FP+ +LDLSKY+
Sbjct: 445 MWFCPKCKEHRQASKKLDLWRLPEILVVHLKRFSYSRY-SNKLETLVDFPVHDLDLSKYV 503
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+ Y+LFA+SNHYGG+GGGHYTAYAK+
Sbjct: 504 SHRTDP---YELFAVSNHYGGVGGGHYTAYAKL 533
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 341/904 (37%), Positives = 477/904 (52%), Gaps = 80/904 (8%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQTLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S + ++NG +T G S G Y+
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYSSMSASLIANGDSTNSSGMHNSGVSRGGA--GFSASYNC 289
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHG 366
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM G
Sbjct: 290 QEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKG 349
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
E+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDL
Sbjct: 350 EIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDL 409
Query: 427 NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
NRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+
Sbjct: 410 NRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSV 469
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS +
Sbjct: 470 TFDPFCYLTLPLPLKKDRIMEVFLVPADPHCRPIQYRVTVPLMGAISDLCEALSKLSGIA 529
Query: 547 IDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRWQEK 605
E +++ +VYNH+ + F+ E +S I + I Y G + + ++EK
Sbjct: 530 A-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEICTTPMDGSEYITLPVYFREK 587
Query: 606 SASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGG 660
+ S L+G PL+ + + L+ + AV + +S PL + S+ G
Sbjct: 588 KSRPSSTSSGAVLYGQPLLVSVPKHRLTLESLYQAVCERISRYIKQPLPEEFLSSPLEPG 647
Query: 661 KENGF--------------------LPEVIDELSNSH----NESVETAELEDLCSRELSF 696
NG L EV + +S E+ + A+ R +F
Sbjct: 648 ACNGSRGSYEGDEEEMDHQEEGKEQLSEVEESGEDSQGGDPTETTQKAKGPPRHKRLFTF 707
Query: 697 QLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHK 750
L ++SC +S+ GK +K + +DW + LY + H
Sbjct: 708 SL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHT 761
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +K ++ AI+L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV
Sbjct: 762 SMSQPQKKKKAAIALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVV 821
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G GHYT
Sbjct: 822 HLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAARPYVYDLIAVSNHYGAMGVGHYT 881
Query: 871 AYAK 874
AYAK
Sbjct: 882 AYAK 885
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 342/908 (37%), Positives = 478/908 (52%), Gaps = 87/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + +R +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLREHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 286
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 287 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 346
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 406
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 467 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 526
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 527 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 584
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 585 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 644
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L EV D+ + H+ES + + + R
Sbjct: 645 EPGACNGSRGSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKR 704
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++SC +S+ GK +K + +DW + LY +
Sbjct: 705 LFTFSL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEAC 758
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 759 EKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPK 818
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G
Sbjct: 819 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGV 878
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 879 GHYTAYAK 886
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 341/908 (37%), Positives = 479/908 (52%), Gaps = 87/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ +G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVDDGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 286
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 287 YNCQEAPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 346
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 406
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 467 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 526
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 527 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 584
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 585 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 644
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L EV D+ + H+ES + + + R
Sbjct: 645 EPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKR 704
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++SC +S+ GK +K + +DW + LY +
Sbjct: 705 LFTFSL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEAC 758
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 759 EKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPK 818
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G
Sbjct: 819 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGV 878
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 879 GHYTAYAK 886
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 341/908 (37%), Positives = 479/908 (52%), Gaps = 87/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ +G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVDDGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 286
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 287 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 346
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 406
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 467 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 526
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 527 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 584
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 585 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 644
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L EV D+ + H+ES + + + R
Sbjct: 645 EPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKR 704
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++SC +S+ GK +K + +DW + LY +
Sbjct: 705 LFTFSL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEAC 758
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 759 EKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPK 818
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G
Sbjct: 819 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGV 878
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 879 GHYTAYAK 886
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 341/908 (37%), Positives = 478/908 (52%), Gaps = 87/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 286
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 287 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 346
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 406
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 467 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 526
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 527 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 584
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 585 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 644
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L EV D+ + H+ES + + + R
Sbjct: 645 EPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKR 704
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++SC +S+ GK +K + +DW + LY +
Sbjct: 705 LFTFSL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEAC 758
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 759 EKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPK 818
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G
Sbjct: 819 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGV 878
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 879 GHYTAYAK 886
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 343/916 (37%), Positives = 477/916 (52%), Gaps = 81/916 (8%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGI-------SMDSTGNDLALVPIEPSRSSLTIAGGPA--LSNGHTTGYRFNQYPGSSFG 295
+G S ST P P+ S+ + A ++NG +T G S G
Sbjct: 221 DGTWPRQTLQSKSSTAPSRNF-PTSPTSSASPYSSVSASSIANGDSTNTSGMHSSGVSRG 279
Query: 296 STFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSD 354
+ Y+ + + GL GL NLGNTCFMNSALQCL +T L YFL D Y
Sbjct: 280 GSAFSA--SYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEA 337
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQEL
Sbjct: 338 EINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQEL 397
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KS
Sbjct: 398 LAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKS 457
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
TLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + V + G D
Sbjct: 458 TLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPCCRPTQYRVVVPLMGAVSD 517
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKI 594
L ALS + E +++ +VYNH+ + F+ L + D+ V G
Sbjct: 518 LCEALSRLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSADGSE 576
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLR 649
+ + ++E+ + S L+G PL+ + + L+ + AV + +S PL
Sbjct: 577 CVTLPVYFRERKSRPSSTSSGAVLYGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLP 636
Query: 650 RTYSSAKAHGGKENGFLPEVI-------------------------DELSNSHNESVETA 684
S+ G NG DEL N E+ +
Sbjct: 637 DESGSSPLEPGACNGSRGSCEGEDEEEMEHQDEGREQLSDTEGSGEDELGNDCGETTQKK 696
Query: 685 ELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYD 738
C + L F SL ++S +S+ GK +K + +DW + LY
Sbjct: 697 VKGQSCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYY 751
Query: 739 PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
+ H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK
Sbjct: 752 DEQESEAYEKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKK 811
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAIS 858
DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+S
Sbjct: 812 FDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVS 871
Query: 859 NHYGGLGGGHYTAYAK 874
NHYG +G GHYTAYAK
Sbjct: 872 NHYGAMGVGHYTAYAK 887
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 340/908 (37%), Positives = 478/908 (52%), Gaps = 87/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 10 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 58
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 59 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 111
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + +L
Sbjct: 112 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRRL 171
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 172 FNIPTERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 230
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 231 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 285
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 286 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 345
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 346 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 405
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 406 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 465
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 466 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 525
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 526 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 583
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 584 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 643
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L EV D+ + H+ES + + + R
Sbjct: 644 EPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKR 703
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++SC +S+ GK +K + +DW + LY +
Sbjct: 704 LFTFSL------VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEAC 757
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 758 EKHLSMSQPQKKKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPK 817
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G
Sbjct: 818 ILVVHLKRFSYNRYWRDKLDTVVEFPVGALNMSEFVCDRSARPYVYDLIAVSNHYGAMGV 877
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 878 GHYTAYAK 885
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 340/908 (37%), Positives = 471/908 (51%), Gaps = 111/908 (12%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--FGERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G R +L G +G + Y + + P S
Sbjct: 220 EDGTW---------------PRQTLQSNG-----SGFSASYNYQEPPSSHI--------- 250
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 251 ------------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL 298
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 299 GMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 358
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 359 HEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 418
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 419 KVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRL 478
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
C + E +++A+VYNH+ + F+ L + D+ V G + + +
Sbjct: 479 CGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYQVCSTSVDGSECVTLPVYF 537
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 538 RERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDDFGSSPL 597
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DEL N ++ + C +
Sbjct: 598 EPGTCNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDELGNDPTKTTQKKIKGQPCPK 657
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 658 RL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAY 712
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 713 EKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 772
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G
Sbjct: 773 ILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSNHYGAMGV 832
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 833 GHYTAYAK 840
>gi|390343728|ref|XP_003725951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Strongylocentrotus purpuratus]
Length = 979
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 336/904 (37%), Positives = 485/904 (53%), Gaps = 70/904 (7%)
Query: 9 LMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSI 68
+M E GGS +P +++QI + L + LK+G+ ++L+ ++W++ W+++V D +
Sbjct: 5 IMAEGGGSGVPDIKQQKQQISELL----ETPLKKGDSWYLVDSKWFKQWKKFVGFDSWDV 60
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQ 128
N+ D A PGP+DNS + EGD ++ +L + DYVLVP
Sbjct: 61 YNMGND-----------ASNPGPVDNSGLF------VEGDVGNLKEHLIDELDYVLVPTA 103
Query: 129 VWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKA 184
WE L WY K P + RK++ G+ V +VEV+ + LKL ++ + V + KA
Sbjct: 104 TWENLTIWYGAVKNQPPVHRKVVEYGMFVKHCKVEVYLMELKLCENSNLDNMVPQKFSKA 163
Query: 185 STRQLYEKVCK-LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQ 242
T + EK K L IE EK RIW+ + + L + T+ DA L Q +++E +
Sbjct: 164 DTIETIEKEMKRLFNIEDEKETRIWNKY-MSNTYEQLSKKENTVQDAGLYQGQVLVIEQK 222
Query: 243 VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMD 302
+G P + S+ + + S + G S S +
Sbjct: 223 NQDGT--------WPRQPASNNSSTNSSYKDSSSSTSTNSSRYITNSSGKSPYSYSSYNN 274
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
Y+ +K + GL GL NLGNTCFMNSALQC+ + P L +YFL D + E+N NP
Sbjct: 275 TSSSDYSRSKPSVQEGLCGLGNLGNTCFMNSALQCMNNVPPLTRYFLSDEFKKELNYNNP 334
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGMHGE+A A+ DL++ +WS + + PR FK ++ RFAPQFSGY QHDSQELLAFL DG
Sbjct: 335 LGMHGEIAKAYADLVQHVWSGQNSYLIPRNFKMQVGRFAPQFSGYQQHDSQELLAFLCDG 394
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNR+++KPY+E++DS GR DE VA+E W NH RNDS+IVD F GQ+KSTLVCP C
Sbjct: 395 LHEDLNRIQKKPYVELRDSDGRSDEVVADEAWSNHLKRNDSIIVDFFHGQFKSTLVCPEC 454
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
KVS+TFDPF +L+LPLP+ RTM V + + P+ V + KHG DL A+S
Sbjct: 455 QKVSVTFDPFSFLSLPLPTKKERTMEVFLIRLDPKSKPLQMKVVVPKHGMVYDLCKAISK 514
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ + + +VYNH+ + F P + + SI + + I Y I+
Sbjct: 515 VSQIAPDK-MAVTDVYNHRFHKVFA-PNDRVESITERDDIFVYEVPVNSADDPDTIIIPV 572
Query: 602 W----QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRT----Y 652
+ K AS S LFG P++ + + + D+ +I + K+ +RR +
Sbjct: 573 YLRERNSKRASFSYSSSSYSLFGQPMLIAVPRKQTTYQDLYEIIMKKMSRYVRRPDTEDW 632
Query: 653 SSAKAHGGK--ENGFLPEVIDELSNSHNESVE------------------TAELEDLCSR 692
G + ENG D S H S E + + L R
Sbjct: 633 YKDDEEGNEVVENGETEMDSDSDSKEHCSSGEDTTQNHKEDPPTPPSKEKKTKSKPLDRR 692
Query: 693 ELSFQLSLTDERISSCKPIQKD--SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK 750
L F++SL + S+ KD + L+ + LDW D + + + H+
Sbjct: 693 SLLFRMSLVNSYGSAELARLKDDGAPLRFNNRTYIALDWKDKAKDKFYIETEAEDSEPHE 752
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +R++ + L CL+ FLTEE L +D WYCP CK+H++ATKK DLW LP VL+
Sbjct: 753 SMNLRSVSRKQQVDLNECLNLFLTEETLEKEDSWYCPACKKHQEATKKFDLWKLPKVLII 812
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
HLKRFSY+R+L++KLDT V FP NLD+S + +G Y YDL A+SNHYGG+GGGHYT
Sbjct: 813 HLKRFSYNRFLRDKLDTLVTFPTENLDMSSSVICPNGGPYQYDLVAVSNHYGGMGGGHYT 872
Query: 871 AYAK 874
AYA+
Sbjct: 873 AYAQ 876
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 344/920 (37%), Positives = 477/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSITSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE N +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 RLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 345/921 (37%), Positives = 477/921 (51%), Gaps = 90/921 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--FGERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T G
Sbjct: 220 EDGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTST-----CGMH 272
Query: 294 FGSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNYQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS C + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSRLCGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYQVCSTS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 572 VDGSECVTLPVYFRERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYV 631
Query: 647 --PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNE 679
PL + S+ G NG L E DEL N +
Sbjct: 632 KQPLPDDFGSSPLEPGTCNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDELGNDPTK 691
Query: 680 SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDV 733
+ + C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 692 TTQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSET 746
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+
Sbjct: 747 RSLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQ 806
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYD
Sbjct: 807 QATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYD 866
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+SNHYG +G GHYTAYAK
Sbjct: 867 LIAVSNHYGAMGVGHYTAYAK 887
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 335/897 (37%), Positives = 470/897 (52%), Gaps = 112/897 (12%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTW------- 224
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
R SL G +G + Y + P
Sbjct: 225 --------PRQSLQSNG-----SGFSASYNCQEPPSPHI--------------------- 250
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM GE+A A+ +
Sbjct: 251 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 310
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY
Sbjct: 311 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPY 370
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YL
Sbjct: 371 LEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
TLPLP R M V + A+ P+ + VT+ G DL ALS + E +++
Sbjct: 431 TLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSGIAA-ENMVVT 489
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRWQEKSASDYLKG 613
+VYNH+ + F+ E +S I + I Y + G + + ++EK +
Sbjct: 490 DVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNMSMDGSECITLPVYFREKKSRPSSAS 548
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGF--- 665
S L+G PL+ + + L+ + AV +S PL + S+ G NG
Sbjct: 549 SGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSRSS 608
Query: 666 ------------------LPEV----IDELSNSHNESVETAELEDLCSRELSFQLSLTDE 703
L EV D+ + H+ES + + + R +F L
Sbjct: 609 YEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFTFSL----- 663
Query: 704 RISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK 757
++SC +S+ GK +K + +DW + LY + H + +K
Sbjct: 664 -VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQPQK 722
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY
Sbjct: 723 KKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSY 782
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 783 NRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGVGHYTAYAK 839
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 335/897 (37%), Positives = 470/897 (52%), Gaps = 112/897 (12%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTW------- 224
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
R SL G +G + Y + P
Sbjct: 225 --------PRQSLQSNG-----SGFSASYNCQEPPSPHI--------------------- 250
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM GE+A A+ +
Sbjct: 251 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 310
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY
Sbjct: 311 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPY 370
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YL
Sbjct: 371 LEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
TLPLP R M V + A+ P+ + VT+ G DL ALS + E +++
Sbjct: 431 TLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLSGIAA-ENMVVT 489
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRWQEKSASDYLKG 613
+VYNH+ + F+ E +S I + I Y + G + + ++EK +
Sbjct: 490 DVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYFREKKSRPSSAS 548
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGF--- 665
S L+G PL+ + + L+ + AV +S PL + S+ G NG
Sbjct: 549 SGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSRSS 608
Query: 666 ------------------LPEV----IDELSNSHNESVETAELEDLCSRELSFQLSLTDE 703
L EV D+ + H+ES + + + R +F L
Sbjct: 609 YEGDEEEEMDHQEEGKEQLSEVEGSGEDDQGDDHSESAQKVKGQPRHKRLFTFSL----- 663
Query: 704 RISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK 757
++SC +S+ GK +K + +DW + LY + H + +K
Sbjct: 664 -VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQPQK 722
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY
Sbjct: 723 KKKAAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSY 782
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 783 NRYWRDKLDTVVEFPVRALNMSEFVCDRSARPYVYDLIAVSNHYGAMGVGHYTAYAK 839
>gi|410964963|ref|XP_003989022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Felis catus]
Length = 961
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 315/899 (35%), Positives = 481/899 (53%), Gaps = 126/899 (14%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN--------- 675
++ + ++ ++ + + + G NG P I E +
Sbjct: 573 TEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 676 -----------SHNESVETAE-------------LEDLCSRELS------FQLSLTDERI 705
S NE+ ++ + E+ C +L+ F +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKSQLTGHKKRLFTFQFNNLGN 692
Query: 706 SSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPVVHKT 751
+ I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 693 TDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESV 747
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV H
Sbjct: 748 EY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVH 805
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
LKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGH+T
Sbjct: 806 LKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHFT 864
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 340/918 (37%), Positives = 477/918 (51%), Gaps = 88/918 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVP---IEPSRSSLT-----------IAGGPALSNGHTTGYRFNQYP 290
+G T L P I PSR+ T ++ P ++NG +T
Sbjct: 221 DGTWPRQT-----LQPKSSIAPSRNFTTSPKSSASPYSAVSASP-IANGDSTNTSGMHCS 274
Query: 291 GSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
G S G + Y+ + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 275 GVSRGGS--GFSASYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPCCRPTQYRVTVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSRLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSAS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
G + + ++E+ + S L+G PL+ + + L+ + AV + +S
Sbjct: 572 ADGSECVTLPVYFRERKSRPSSTSSGAVLYGQPLLLSVPKHKLTLESLYQAVCERISRYI 631
Query: 647 --PLRRTYSSAKAHGGKENG----------------------FLPEVIDELSNSHNESVE 682
PL S+ G NG +E+++
Sbjct: 632 KQPLPDEPGSSPLELGACNGSRGSCEGEQEEEMEHQEEGKEELSETEGSGEEELGSETIQ 691
Query: 683 TAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHEL 736
C + L F SL ++S +S+ GK +K + +DW + L
Sbjct: 692 KKVEGQTCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRNL 746
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
Y + H + +K ++ +++L C++ F T E LG D WYCP CK+H+QAT
Sbjct: 747 YYDEQESEAYEKHVSMLQPQKKKKTSVALRDCIELFTTMETLGEHDPWYCPNCKKHQQAT 806
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
KK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A
Sbjct: 807 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIA 866
Query: 857 ISNHYGGLGGGHYTAYAK 874
+SNHYG +G GHYTAYAK
Sbjct: 867 VSNHYGAMGVGHYTAYAK 884
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 343/920 (37%), Positives = 476/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + G+ GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQESPSSHIQPGVCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + V + G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVSADPRCRPTQYRVIVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 514 AMSDLCEALSRLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++EK + S L+G PL+ + + L+ + AV + +S
Sbjct: 573 DGSECVTLPVYFREKKSRPSSTSSGALLYGQPLLVSVPKHKLTLESLYQAVCERISRYIK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL S+ G NG L E DE + H E+
Sbjct: 633 QPLPEESGSSPVELGTCNGSRGSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGSDHGET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C+++L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIGGRPCAKKL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ A++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 SLYYDEQESEAYEKHVSMLQPQKKKKTAMALRDCIELFTTMETLGEQDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSYSRY ++KLDT V FP+ L++S+++ YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 337/907 (37%), Positives = 469/907 (51%), Gaps = 111/907 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L G +G + Y + P S
Sbjct: 221 DGTW---------------PRQTLQSNG-----SGFSASYNCQEPPSSHI---------- 250
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLG
Sbjct: 251 -----------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 299
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 300 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 359
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 360 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 419
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 420 VSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLS 479
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++A+VYNH+ + F+ L + D+ V G + + ++
Sbjct: 480 GIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFR 538
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAH 658
E+ + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 539 ERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLE 598
Query: 659 GGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSRE 693
G NG L E DE N +E+ + + + R
Sbjct: 599 PGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRL 658
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPV 747
+F L ++S +S+ GK +K + +DW + LY +
Sbjct: 659 FTFSL------VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYE 712
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +
Sbjct: 713 KHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKI 772
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G G
Sbjct: 773 LVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVG 832
Query: 868 HYTAYAK 874
HYTAYAK
Sbjct: 833 HYTAYAK 839
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 339/907 (37%), Positives = 469/907 (51%), Gaps = 110/907 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L G +G + Y + P S
Sbjct: 221 DGTW---------------PRQTLQSNG-----SGFSASYNCQEPPSSHI---------- 250
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLG
Sbjct: 251 -----------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 299
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 300 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 359
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 360 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 419
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 420 VSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLS 479
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++A+VYNH+ + F+ L + D+ V G + + ++
Sbjct: 480 GIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFR 538
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAH 658
E+ + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 539 ERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLE 598
Query: 659 GGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSRE 693
G NG L E DE N +E+ + C +
Sbjct: 599 PGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQPCPKR 658
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPV 747
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 659 L-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYE 713
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +
Sbjct: 714 KHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKI 773
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G G
Sbjct: 774 LVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVG 833
Query: 868 HYTAYAK 874
HYTAYAK
Sbjct: 834 HYTAYAK 840
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 336/907 (37%), Positives = 467/907 (51%), Gaps = 110/907 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L Q GS+F ++
Sbjct: 221 DGTW---------------PRQTL-------------------QSNGSAFSAS------- 239
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
Y+ + + GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLG
Sbjct: 240 YNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 299
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 300 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 359
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 360 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 419
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P + V + G DL ALS
Sbjct: 420 VSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPCCRPTQYRVVVPLMGAVSDLCEALSRLS 479
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++ +VYNH+ + F+ L + D+ V G + + ++
Sbjct: 480 GIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSADGSECVTLPVYFR 538
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAH 658
E+ + S L+G PL+ + + L+ + AV + +S PL S+
Sbjct: 539 ERKSRPSSTSSGAVLYGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLPDESGSSPLE 598
Query: 659 GGKENGFLPEVI-------------------------DELSNSHNESVETAELEDLCSRE 693
G NG DEL N E+ + C +
Sbjct: 599 PGACNGSRGSCEGEDEEEMEHQDEGREQLSDTEGSGEDELGNDCGETTQKKVKGQSCPKR 658
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPV 747
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 659 L-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYE 713
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +
Sbjct: 714 KHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKI 773
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G G
Sbjct: 774 LVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGVG 833
Query: 868 HYTAYAK 874
HYTAYAK
Sbjct: 834 HYTAYAK 840
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 340/908 (37%), Positives = 469/908 (51%), Gaps = 111/908 (12%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCCE--RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G R +L G +G + Y + P S
Sbjct: 220 EDGTW---------------PRQTLQSNG-----SGFSASYNCQEPPSSHI--------- 250
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 251 ------------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL 298
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 299 GMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 358
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 359 HEDLNRVKKKPYLELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 418
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 419 KVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRL 478
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E +++A+VYNH+ + F+ L + D+ V G + + +
Sbjct: 479 SGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSMDGSECVMLPVYF 537
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + + L+ + AV +S PL S+
Sbjct: 538 RERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDESGSSPL 597
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DE N +E+ + C +
Sbjct: 598 EPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQPCPK 657
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 658 RL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAMDWDSETRSLYYDEQESEAY 712
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 713 EKHVSMLQPQKKKKTTMALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 772
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G
Sbjct: 773 ILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGV 832
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 833 GHYTAYAK 840
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 334/896 (37%), Positives = 467/896 (52%), Gaps = 111/896 (12%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTW------- 224
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
R +L G G + Y + P
Sbjct: 225 --------PRQTLQSNGA-----GFSASYNCQEPPSPHI--------------------- 250
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM GE+A A+ +
Sbjct: 251 QPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 310
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY
Sbjct: 311 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPY 370
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YL
Sbjct: 371 LEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
TLPLP R M V + A+ P+ + VT+ G DL ALS + E +++
Sbjct: 431 TLPLPLKKDRIMEVFLVPADPHCRPIQYRVTVPLMGAISDLCEALSKLSGIAA-ENMVVT 489
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRWQEKSASDYLKG 613
+VYNH+ + F+ E +S I + I Y G + + ++EK +
Sbjct: 490 DVYNHRFHKIFQM-DEGLSHITPRDDIFVYEICTTPMDGSEYITLPVYFREKKSRPSSTS 548
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGF--- 665
S L+G PL+ + + L+ + AV + +S PL + S+ G NG
Sbjct: 549 SGAVLYGQPLLVSVPKHRLTLESLYQAVCERISRYIKQPLPEEFLSSPLEPGACNGSRGS 608
Query: 666 -----------------LPEVIDELSNSH----NESVETAELEDLCSRELSFQLSLTDER 704
L EV + +S E+ + A+ R +F L
Sbjct: 609 YEGDEEEMDHQEEGKEQLSEVEESGEDSQGGDPTETTQKAKGPPRHKRLFTFSL------ 662
Query: 705 ISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT 758
++SC +S+ GK +K + +DW + LY + H + +K
Sbjct: 663 VNSCGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYFDEQESEACEKHTSMSQPQKK 722
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ AI+L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+
Sbjct: 723 KKAAIALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYN 782
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 783 RYWRDKLDTVVEFPVRALNMSEFVCDRAARPYVYDLIAVSNHYGAMGVGHYTAYAK 838
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 333/882 (37%), Positives = 476/882 (53%), Gaps = 73/882 (8%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
++ G ++L+++RW+ W+RYV +D ++GV PGPIDNS ++
Sbjct: 52 MRLGESWYLLASRWFSLWKRYV----------GYDRWDVSGVGDPNL-FPGPIDNSCLLG 100
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEK 156
+G S ++ +L DYVLVP W+KL WY +G + RK++ G+ +
Sbjct: 101 DGETQS------LKEHLIAQLDYVLVPSSAWQKLVSWYGCIEGQQPIVRKVMEFGLYAKH 154
Query: 157 -RVEVFXLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQEK-ARIWD-YFNK 212
VEV+ L LKL +S S + S++ S L ++V KL I EK R+W +F+
Sbjct: 155 CEVEVYPLELKLCESSSPSNVISCCFSRRDSVATLVKEVRKLFKIPAEKDVRLWSSHFDG 214
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI---------SMDSTGNDLALVPIEP 263
S L TL+DA + +L+EV+ ++G S +T +
Sbjct: 215 --SYEQLSELGVTLEDANIYHGALVLIEVKNEDGTWPQHPFLAKSSTATSRNFTTSSKPS 272
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
+ S T + ++NG ++ G + + Y S ++A + G L GL
Sbjct: 273 ASSYSTASATSVITNGDSSNSYGLSSSSLGRGGSGFACN-SYSSRDSASLSQPG-LCGLS 330
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSALQCL +TP L YFL D Y EIN NPLGM GE+A A+ +L++++WS
Sbjct: 331 NLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAELIKQIWSG 390
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
++ VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ G
Sbjct: 391 RQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANG 450
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD VA E W+NH+ RNDS+IVD+F G +KSTLVCP CSKVS+TFDPF YLTLPLP
Sbjct: 451 RPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLKR 510
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
R + VT+ YA+ P+ + V + G DL +LS + E +++ +VYNH+
Sbjct: 511 DRLLEVTLVYADPQRRPVQYRVVVPMMGAISDLCESLSKLSGVPA-ENMVVTDVYNHRFH 569
Query: 563 RFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAP 622
+ F+ L + D+ V + G + ++EK+A + LFG P
Sbjct: 570 KIFQADEALNHIMPKDDIFVYEVCKPSEDGSEYITFSVYFREKAARQSSSTAGTVLFGQP 629
Query: 623 LVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGFLPEV---IDELS 674
L+ + + L+ + V + +S P+ YS+ G NG I+E+
Sbjct: 630 LLISVPKHKLTVDHLYSVVLERISRYVKLPVAEEYSAPCPDRGACNGSSSVAEGDIEEME 689
Query: 675 NSHN--ESVETAELEDLCSRELSFQLSLTDERISSCK------------------PIQKD 714
+ + E E D C E Q+ T + + CK I +
Sbjct: 690 HQDDGQEGREKLAEVDPCPSEGCMQIEPTRD-LQPCKKQHFTFSLVNLYGTSEINSIVEG 748
Query: 715 SILKPGKHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEA-ISLFSCLDAF 772
+LK + +DW L+D ++ K ++ + +A ++L C++ F
Sbjct: 749 KLLKLSAFSTLAIDWDSGTRRLLFDE---QEAQAFEKHASVLQPQKMKAVVALKDCIELF 805
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFP 832
T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSYSRY ++KLDT V FP
Sbjct: 806 TTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFP 865
Query: 833 ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
I L++S+++ G SYVYDL A+SNHYG +G GHYTAYAK
Sbjct: 866 IRGLNMSEFVCDPRGGSYVYDLIAVSNHYGAMGVGHYTAYAK 907
>gi|344266305|ref|XP_003405221.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Loxodonta
africana]
Length = 953
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 331/928 (35%), Positives = 498/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPHTKPMQYKVVVPKIGNISDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ ++ + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEINVNKTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI++LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPIIDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 342/920 (37%), Positives = 476/920 (51%), Gaps = 90/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE N +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ + + R +F L ++S +S+ GK +K + +DW +
Sbjct: 693 TQKIKGQPCPKRLFTFSL------VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETR 746
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 747 RLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 806
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 807 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 866
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 867 IAVSNHYGAMGVGHYTAYAK 886
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 345/921 (37%), Positives = 476/921 (51%), Gaps = 90/921 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCCE--RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T G
Sbjct: 220 EDGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMH 272
Query: 294 FGSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDASGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 572 MDGSECVMLPVYFRERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYV 631
Query: 647 --PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNE 679
PL S+ G NG L E DE N +E
Sbjct: 632 KQPLPDESGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSE 691
Query: 680 SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDV 733
+ + C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 692 TTQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAMDWDSET 746
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+
Sbjct: 747 RSLYYDEQESEAYEKHVSMLQPQKKKKTTMALRDCIELFTTMETLGEHDPWYCPNCKKHQ 806
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYD
Sbjct: 807 QATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYD 866
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+SNHYG +G GHYTAYAK
Sbjct: 867 LIAVSNHYGAMGVGHYTAYAK 887
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 344/920 (37%), Positives = 476/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE N +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 RLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|115527977|gb|AAI25124.1| Ubiquitin specific peptidase 15 [Homo sapiens]
Length = 952
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERFFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|296212206|ref|XP_002752723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Callithrix jacchus]
Length = 952
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HSCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|114644048|ref|XP_001166420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 5 [Pan
troglodytes]
gi|297692323|ref|XP_002823510.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Pongo abelii]
gi|397508880|ref|XP_003824867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Pan
paniscus]
gi|410211580|gb|JAA03009.1| ubiquitin specific peptidase 15 [Pan troglodytes]
gi|410254952|gb|JAA15443.1| ubiquitin specific peptidase 15 [Pan troglodytes]
gi|410300136|gb|JAA28668.1| ubiquitin specific peptidase 15 [Pan troglodytes]
Length = 952
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|350584211|ref|XP_003126389.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Sus
scrofa]
Length = 952
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 325/898 (36%), Positives = 487/898 (54%), Gaps = 116/898 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALST + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNS 676
++ + ++ ++ + + + G NG P I E
Sbjct: 573 TEDKLYNLLLVRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 677 HNESVETAEL---------ED-----------LCSRE-------------LSFQL-SLTD 702
+ES + EL ED LC+ E +FQ +L +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGN 692
Query: 703 ERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVK 756
I+ K + D L+ + + LDW D+ + Y D + +D + K
Sbjct: 693 TDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--K 750
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFS
Sbjct: 751 PPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFS 810
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 811 YSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|403269028|ref|XP_003926560.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Saimiri boliviensis boliviensis]
Length = 952
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|14149627|ref|NP_006304.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Homo sapiens]
gi|388454557|ref|NP_001253886.1| ubiquitin carboxyl-terminal hydrolase 15 [Macaca mulatta]
gi|5814097|gb|AAD52099.1|AF106069_1 deubiquitinating enzyme [Homo sapiens]
gi|20521071|dbj|BAA25455.2| KIAA0529 protein [Homo sapiens]
gi|119617512|gb|EAW97106.1| ubiquitin specific peptidase 15, isoform CRA_c [Homo sapiens]
gi|168267398|dbj|BAG09755.1| ubiquitin carboxyl-terminal hydrolase 15 [synthetic construct]
gi|380785461|gb|AFE64606.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Macaca mulatta]
Length = 952
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 330/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 331/899 (36%), Positives = 468/899 (52%), Gaps = 104/899 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L+ G ++LI +RW++ W++YV FDS M V PGPIDNS +
Sbjct: 5 LQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNVGEHNL-FPGPIDNSGLF- 52
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
S+ + ++ +L + DYVLVP + W KL WY +G + RK++ G+ V
Sbjct: 53 -----SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKH 107
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ L LKL ++ D + + KA T EK + KL I E+ R+W+ +
Sbjct: 108 CKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKY-MS 166
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ L D T+ DA L Q +++E Q ++G R +L
Sbjct: 167 NTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTW---------------PRQTLQSKSS 211
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD------------------SYNTAKKGE 315
A S TT + + P SS ++ + DG + SYN +
Sbjct: 212 TAPSRNFTTSPKPSASPYSSVSASLIANGDGTNTSGMHSSGVSRGGSGFSASYNCQEPQS 271
Query: 316 ---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM GE+A A
Sbjct: 272 PHTQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEA 331
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+
Sbjct: 332 YAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKK 391
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF
Sbjct: 392 KPYLEPKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPF 451
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YLTLPLP R M V + A+ P+ VT+ G DL AL+ + E +
Sbjct: 452 CYLTLPLPLKKDRVMEVFLVPADPQCRPIQCRVTVPLMGAISDLCEALAKLSGIAA-ENM 510
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYL 611
++ +VYNH+ + F+ L + D+ V + G + + ++EK +
Sbjct: 511 VVTDVYNHRFHKIFQMDEGLSHIMPRDDIFVYEVCNTSMDGSECITLPVYFREKKSRPSS 570
Query: 612 KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENG-- 664
S L+G PL+ + + L+ + AV +S PL + S+ G NG
Sbjct: 571 TSSGAVLYGQPLLVSVPKHKLTLEALYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSR 630
Query: 665 -------------------FLPEV----IDELSNSHNESVETAELEDLCSRELSFQLSLT 701
L E DE + +E + + R +F L
Sbjct: 631 SSYEGDDDEEMDHQEEGKEHLSETEGSGEDEQGDGPSEPTHKVKGQPGHRRLFTFSL--- 687
Query: 702 DERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTV 755
++S +S+ GK +K + +DW + LY + H +
Sbjct: 688 ---VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDQQESEACEKHVSMSQP 744
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
+K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRF
Sbjct: 745 QKKKKTAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRF 804
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SY+RY ++KLDT V FP+ L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 805 SYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSARPYVYDLIAVSNHYGAMGVGHYTAYAK 863
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 336/917 (36%), Positives = 474/917 (51%), Gaps = 105/917 (11%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 15 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 63
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 64 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVE 116
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 117 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 176
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 177 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTW------- 228
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD--------- 306
R +L A S TT + + P SS ++ + DG +
Sbjct: 229 --------PRQTLQSKSSTAPSRNFTTSPKPSASPYSSVSASLIANGDGTNTSGMHSSGV 280
Query: 307 ---------SYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YS 353
SYN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y
Sbjct: 281 SRGGSGFSASYNCQEPQSPHTQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYE 340
Query: 354 DEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
EIN +NPLGM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQE
Sbjct: 341 AEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQE 400
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
LLAF+LDGLHEDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +K
Sbjct: 401 LLAFILDGLHEDLNRVKKKPYLEPKDASGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFK 460
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
STLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P+ VT+ G
Sbjct: 461 STLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPQCRPIQCRVTVPLMGAIS 520
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
DL AL+ + E +++ +VYNH+ + F+ L + D+ V + G
Sbjct: 521 DLCEALAKLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLSHIMPRDDIFVYEVCNTSMDGS 579
Query: 594 IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PL 648
+ + ++EK + S L+G PL+ + + L+ + AV +S PL
Sbjct: 580 ECITLPVYFREKKSRPSSTSSGAVLYGQPLLVSVPKHKLTLEALYQAVCDRISRYIKQPL 639
Query: 649 RRTYSSAKAHGGKENG---------------------FLPEV----IDELSNSHNESVET 683
+ S+ G NG L E DE + +E
Sbjct: 640 PDEFLSSPLEPGACNGSRSSYEGDDDEEMDHQEEGKEHLSETEGSGEDEQGDGPSEPTHK 699
Query: 684 AELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELY 737
+ + R +F L ++S +S+ GK +K + +DW + LY
Sbjct: 700 VKGQPGHRRLFTFSL------VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLY 753
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
+ H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATK
Sbjct: 754 YDQQESEACEKHVSMSQPQKKKKTAVALRECIELFTTMETLGEHDPWYCPTCKKHQQATK 813
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI 857
K DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ + YVYDL A+
Sbjct: 814 KFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSARPYVYDLIAV 873
Query: 858 SNHYGGLGGGHYTAYAK 874
SNHYG +G GHYTAYAK
Sbjct: 874 SNHYGAMGVGHYTAYAK 890
>gi|149066660|gb|EDM16533.1| ubiquitin specific peptidase 15, isoform CRA_b [Rattus norvegicus]
Length = 952
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 332/928 (35%), Positives = 498/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSAPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPL 602
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 603 RCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 341/911 (37%), Positives = 474/911 (52%), Gaps = 92/911 (10%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q +L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-YPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G T
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTQQS 231
Query: 256 LALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
+ PSR+ T ++NG +T G S
Sbjct: 232 KS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMHSSSVSRGGSGFS 284
Query: 306 DSYNTAKK---GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NP
Sbjct: 285 ASYNCQESPLTHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNP 344
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDG
Sbjct: 345 LGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDG 404
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C
Sbjct: 405 LHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPEC 464
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
+KVS+TFDPF YLTLPLP R M + + A+ P + V + G DL ALS
Sbjct: 465 AKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSK 524
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGK-IKLEIV 599
+ E +++ +VYNH+ + F+ L + +DD + R G + + L +
Sbjct: 525 LSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVRSTSPDGSECVTLPVY 583
Query: 600 NRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSS 654
R ++ S G+ L+G PL+ + + L+ + AV + +S PL S
Sbjct: 584 FRERKSRPSSTSTGA--VLYGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLPDESGS 641
Query: 655 AKAHGGKENGF---------------------LPEVI----DELSNSHNESVETAELEDL 689
+ G NG L E DE + H E+ +
Sbjct: 642 SPLELGACNGSRSGCAGEDEEEMEHQEEGREQLSETEGSGDDEPGSDHGEATQKKSKGRP 701
Query: 690 CSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL------LDWTDDVHELYDPSYIK 743
C R L F SL ++S +S+ GK +K+ +DW + Y
Sbjct: 702 CPRRL-FTFSL----VNSYGTADINSLATDGKLLKLTSRSTLAIDWDSETRSRYYNEQES 756
Query: 744 DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWM 803
+ H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW
Sbjct: 757 ETYEKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWS 816
Query: 804 LPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGG 863
LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG
Sbjct: 817 LPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGA 876
Query: 864 LGGGHYTAYAK 874
+G GHYTAYAK
Sbjct: 877 MGVGHYTAYAK 887
>gi|21592289|ref|NP_660185.1| ubiquitin carboxyl-terminal hydrolase 15 [Rattus norvegicus]
gi|81872777|sp|Q9R085.1|UBP15_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase of 109 kDa; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|6492122|gb|AAF14188.1|AF106657_1 deubiquitinating enzyme Ubp109 [Rattus norvegicus]
Length = 952
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 332/928 (35%), Positives = 498/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSAPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPL 602
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 603 RCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEETCKGRLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|291389465|ref|XP_002711347.1| PREDICTED: ubiquitin specific peptidase 15 isoform 1 [Oryctolagus
cuniculus]
Length = 952
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 329/928 (35%), Positives = 497/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVSADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSL 602
Query: 662 E-------NGFLPEVIDELSN--------------------SHNESVETAE--------- 685
NG P I E + S NE+ ++ +
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 686 ----LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
ED C R +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW ++ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPELKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 343/920 (37%), Positives = 475/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTL CP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLGCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE N +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 RLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 342/920 (37%), Positives = 476/920 (51%), Gaps = 88/920 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--YRERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ + + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSNPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGI-------SMDSTGNDLALVPIEPSRSSLTIAGGPA--LSNGHTTGYRFNQYPGSSF 294
++G S ST P P+ S+ + A ++NG +T G
Sbjct: 220 EDGTWPRQTLQSKSSTAPSRNF-PTSPTSSASPYSSVSASPIANGDSTNTS-----GMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 KYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M + + A+ P + V + G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGVAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSA 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV + +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSGAVLYGQPLLVSVAKHKLTLESLYQAVCERISRYIK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL S+ G NG L E DEL H E+
Sbjct: 633 QPLPEESGSSPLEPGACNGSRGSCEGEDEEEMEHQEEGKEQLSETEDSGEDELGGDHEET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKVKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ A++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 SLYYDEQESEAYEKHMSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|395852086|ref|XP_003798573.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Otolemur garnettii]
Length = 952
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 332/928 (35%), Positives = 496/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + S V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMSNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNILDLCAALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTDTEDTEGPP 602
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW ++ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPELKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 343/920 (37%), Positives = 475/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAP FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPSMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE N +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDRETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 RLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 808 ATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 338/918 (36%), Positives = 473/918 (51%), Gaps = 85/918 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCCE--RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T + S
Sbjct: 220 EDGTWPRQTLQSKS--STVPSRNFTTSPKSSASPYSSVSASPIANGDSTNT--SGMRSSG 275
Query: 294 FGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-Y 352
Y+ + + GL GL NLGNTCFMNSALQCL +T L YFL D Y
Sbjct: 276 VSRGGSGFSASYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEY 335
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQ
Sbjct: 336 EAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQ 395
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +
Sbjct: 396 ELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLF 455
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + V + G
Sbjct: 456 KSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPRCRPTQYRVIVPLMGAV 515
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 516 SDLCEALSRLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYETCSTSSDS 574
Query: 593 KIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----P 647
+ + ++E+ + S L+G PL+ + L+ + AV + +S P
Sbjct: 575 SECVTLPVYFRERKSRTSSTSSGAVLYGQPLLISVPRHKLTFESLYEAVCERISRYIKQP 634
Query: 648 LRRTYSSAKAHGGKENG---------------------FLPEV----IDELSNSHNESVE 682
L G NG L E DEL + H+E+ +
Sbjct: 635 LPDESGGLPLEPGACNGSRGSCEGDDEEEMEHQEEGKEHLSETEGSGEDELGSEHSETTQ 694
Query: 683 TAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHEL 736
+ + R +F L ++S +S+ GK +K + +DW + L
Sbjct: 695 KIKGQPCPKRLFTFSL------VNSYGTADINSLAADGKLLKLNSRSTLAIDWDSETRSL 748
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
Y + H + +K ++ A++L C++ F T E LG D WYCP CK+H+QAT
Sbjct: 749 YYDEQESEAYEKHVSMLQPQKKKKMAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQAT 808
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
KK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDLIA 868
Query: 857 ISNHYGGLGGGHYTAYAK 874
+SNHYG +G GHYTAYAK
Sbjct: 869 VSNHYGAMGVGHYTAYAK 886
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 343/920 (37%), Positives = 477/920 (51%), Gaps = 89/920 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
F S M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFGSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ AR+W+ + + L D T+ DA L + Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAEREARLWNKY-MSNTYEQLSKLDNTVQDAGLYLGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSDSLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNES 680
PL + S+ G NG L E DE + +E+
Sbjct: 633 QPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGSDPSET 692
Query: 681 VETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVH 734
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 693 TQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETR 747
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+Q
Sbjct: 748 SLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQ 807
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDL 854
ATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 808 ATKKSDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDL 867
Query: 855 FAISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 868 IAVSNHYGAMGVGHYTAYAK 887
>gi|426224801|ref|XP_004006557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Ovis
aries]
Length = 952
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 325/898 (36%), Positives = 484/898 (53%), Gaps = 116/898 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLR 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A QCL +TP L +YFL D Y DE+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AFQCLSNTPPLTEYFLNDKYQDELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNS 676
++ + ++ ++ + + G NG P I E
Sbjct: 573 TEDKLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 677 HNESVETAEL---------ED-----------LCSRE-------------LSFQL-SLTD 702
+ES + EL ED LC+ E +FQ +L +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFNNLGN 692
Query: 703 ERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVK 756
I+ K + D L+ + + LDW D+ + Y D + +D + K
Sbjct: 693 TDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--K 750
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFS
Sbjct: 751 PPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFS 810
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 811 YSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 335/908 (36%), Positives = 466/908 (51%), Gaps = 111/908 (12%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--YRERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ + + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSNPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G R +L G +G + Y + P S
Sbjct: 220 EDGTW---------------PRQTLQSNG-----SGFSASYNCQESPSSHI--------- 250
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 251 ------------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPL 298
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 299 GMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 358
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 359 HEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 418
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M + + A+ P + V + G DL ALS
Sbjct: 419 KVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSRL 478
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ L + D+ V G + + +
Sbjct: 479 SGVAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSADGSECVTLPVYF 537
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + + L+ + AV + +S PL S+
Sbjct: 538 RERKSRPSSTSSGAVLYGQPLLVSVAKHKLTLESLYQAVCERISRYIKQPLPEESGSSPL 597
Query: 658 HGGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DEL H E+ + C +
Sbjct: 598 EPGACNGSRGSCEGEDEEEMEHQEEGKEQLSETEDSGEDELGGDHEETTQKKVKGQPCPK 657
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 658 RL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAY 712
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 713 EKHMSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 772
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G
Sbjct: 773 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGV 832
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 833 GHYTAYAK 840
>gi|410964961|ref|XP_003989021.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Felis catus]
Length = 990
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 318/903 (35%), Positives = 492/903 (54%), Gaps = 105/903 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSAPKSPGASNFSAL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN----- 675
+ ++ + ++ ++ + + + G NG P I E +
Sbjct: 598 PRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 676 ---------------SHNESVETAE-------------LEDLCSRELS------FQLSLT 701
S NE+ ++ + E+ C +L+ F
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKSQLTGHKKRLFTFQFN 717
Query: 702 DERISSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPV 747
+ + I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEK 772
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP V
Sbjct: 773 HESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPV 830
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGG
Sbjct: 831 LVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGG 890
Query: 868 HYT 870
H+T
Sbjct: 891 HFT 893
>gi|301614077|ref|XP_002936515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 975
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 335/902 (37%), Positives = 484/902 (53%), Gaps = 114/902 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LK+G+ ++LI +RW++ W++YV D + N+ S + PGP+DNS +
Sbjct: 50 LKKGDEWYLIDSRWFKQWKKYVGFDAWDMYNVGESSLY-----------PGPVDNSGLF- 97
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
++ D ++ +L + DYVLVP + W+KL WY +G + RK++ G+ V
Sbjct: 98 -----ADHDTQVLKEHLIDELDYVLVPTEAWKKLMNWYGSVEGQHPIVRKVVEHGLFVKN 152
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ + LKL D D + R KA T EK ++R I ++ R+W+ +
Sbjct: 153 CKVEVYLIELKLCDDSDPENVIARHFSKADTIDTIEK--EMRNIFNISADKETRLWNRY- 209
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLT-- 269
+ L + T+ DA L Q I++E + +G P +P S T
Sbjct: 210 MTNTYEQLTKKESTVQDAGLYQGQMIVIEQRNADGT-----------WPRQPQTKSSTAT 258
Query: 270 -----IAGGPALS---------NGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+G P+ S NG ++ Y N G + G SY+ +
Sbjct: 259 SRNFATSGKPSTSSYSTSSSMTNGDSSTYSQNNSSGLNKGGYTSSYS----SYSYREPSS 314
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NLGNTCFMNSALQCL +TP L +YF+ D Y EIN ENPLGM GE+A+A+ +
Sbjct: 315 QPGLCGLSNLGNTCFMNSALQCLSNTPPLTRYFVTDEYKKEINRENPLGMKGEIAVAYAE 374
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+R++WS + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY
Sbjct: 375 LIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY 434
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+KD+ GRPD VA E W+NH RN+S+IVD+F G +KSTLVCP CSKVS+TFDPF YL
Sbjct: 435 LELKDANGRPDSVVAAEAWENHLRRNNSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYL 494
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
TLPLP RTM V ++ P + VT+ K G DL ALS + E +++
Sbjct: 495 TLPLPMKKDRTMEVFFVRSDPHCKPKQYRVTVPKMGVVSDLCSALSKLSEVPA-ENMVVT 553
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGKIKLEIV---NRWQEKSASDY 610
+VYNH+ + F+ E++S I + + I Y RK + L I R+++ +++
Sbjct: 554 DVYNHRFHKIFQM-DEMLSHIMERDDIFVYEVKPRKAEEWVTLPICFRERRYRQATSTGT 612
Query: 611 LKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR--------TYSSAKAHGGKE 662
+ LFG P++ + + +L+ +D+ +L ++R +YS + G
Sbjct: 613 V------LFGQPIMISVPKHNLT---LDVLYEIVLERIQRYVKNPHPESYSCSSTDSGAC 663
Query: 663 NGF-----------------LPEVIDELSNSHNESVETAELEDLCS------------RE 693
NG E +E + +ESVE E CS R
Sbjct: 664 NGSNGIYDDEMDHQEEDADDQEESQEETNGQSDESVEEENSEGGCSPCNKMPKKALVCRN 723
Query: 694 LSFQLSLTDERISS-CKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTG 752
F SL + ++ + LK V +DW + +L+ + H++
Sbjct: 724 RLFAFSLVNSYATADVGSMPAKGYLKLSSFATVAIDWDSESKKLFYDDQEAEAFDKHES- 782
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
T + ++ ++L C+ F E LG D WYCP CK+H++ATKK DLW LP +LV HL
Sbjct: 783 MTQPQKKKVTVALRECIQLFTKTETLGEHDPWYCPHCKKHQRATKKFDLWSLPKILVVHL 842
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSY+R+ ++KLD V FPI +L++S ++ YVYDL A+SNHYGG+GGGHYTAY
Sbjct: 843 KRFSYNRFWRDKLDAVVEFPIRDLNMSDFVCDPQAGPYVYDLVAVSNHYGGMGGGHYTAY 902
Query: 873 AK 874
AK
Sbjct: 903 AK 904
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 335/908 (36%), Positives = 466/908 (51%), Gaps = 112/908 (12%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCCE--RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G R +L G +G + Y + P S
Sbjct: 220 EDGTW---------------PRQTLQSNG-----SGFSASYNCQESPSSHI--------- 250
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 251 ------------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL 298
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 299 GMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 358
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 359 HEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 418
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M V + A+ P + V + G DL ALS
Sbjct: 419 KVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPRCRPTQYRVIVPLMGAVSDLCEALSRL 478
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ L + D+ V + + +
Sbjct: 479 SGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYETCSTSSDSSECVTLPVYF 537
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + L+ + AV + +S PL
Sbjct: 538 RERKSRTSSTSSGAVLYGQPLLISVPRHKLTFESLYEAVCERISRYIKQPLPDESGGLPL 597
Query: 658 HGGKENG---------------------FLPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DEL + H+E+ + + + R
Sbjct: 598 EPGACNGSRGSCEGDDEEEMEHQEEGKEHLSETEGSGEDELGSEHSETTQKIKGQPCPKR 657
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
+F L ++S +S+ GK +K + +DW + LY +
Sbjct: 658 LFTFSL------VNSYGTADINSLAADGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAY 711
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 712 EKHVSMLQPQKKKKMAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 771
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G
Sbjct: 772 ILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDLIAVSNHYGAMGV 831
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 832 GHYTAYAK 839
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 340/921 (36%), Positives = 473/921 (51%), Gaps = 90/921 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--YRERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-YPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T G
Sbjct: 220 EDGTWPRQTQQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMH 272
Query: 294 FGSTFMDMDDGYDSYNTAKK---GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNCQESPLTHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M + + A+ P + V +
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
G + + ++E+ + + L+G PL+ + + L+ + AV + +S
Sbjct: 572 PDGSECVTLPVYFRERKSRPSSTSTGAVLYGQPLLVSVPKHKLTLESLYQAVCERISRYI 631
Query: 647 --PLRRTYSSAKAHGGKENGF---------------------LPEVI----DELSNSHNE 679
PL S+ G NG L E DE + H E
Sbjct: 632 KQPLPDESGSSPLELGACNGSRSGCAGEDEEEMEHQEEGREQLSETEGSGDDEPGSDHGE 691
Query: 680 SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDV 733
+ + C R L F SL ++S +S+ GK +K + +DW +
Sbjct: 692 ATQKKNKGRPCPRRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSET 746
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
Y + H + +K ++ A++L C++ F T E LG D WYCP CK+H+
Sbjct: 747 RSCYYNEQESETYEKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQ 806
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYD
Sbjct: 807 QATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYD 866
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+SNHYG +G GHYTAYAK
Sbjct: 867 LIAVSNHYGAMGVGHYTAYAK 887
>gi|114051714|ref|NP_001039895.1| ubiquitin carboxyl-terminal hydrolase 15 [Bos taurus]
gi|359065632|ref|XP_003586138.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Bos
taurus]
gi|122135735|sp|Q2HJE4.1|UBP15_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|88682918|gb|AAI05522.1| Ubiquitin specific peptidase 15 [Bos taurus]
gi|296487434|tpg|DAA29547.1| TPA: ubiquitin specific peptidase 15 [Bos taurus]
Length = 952
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 324/898 (36%), Positives = 484/898 (53%), Gaps = 116/898 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLR 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNS 676
++ + ++ ++ + + G NG P I E
Sbjct: 573 TEDKLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 677 HNESVETAEL---------ED-----------LCSRE-------------LSFQL-SLTD 702
+ES + EL ED LC+ E +FQ +L +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFNNLGN 692
Query: 703 ERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVK 756
I+ K + D L+ + + LDW D+ + Y D + +D + K
Sbjct: 693 TDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--K 750
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFS
Sbjct: 751 PPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFS 810
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 811 YSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 342/921 (37%), Positives = 482/921 (52%), Gaps = 90/921 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCGQ-RPDAETQ-KSELGALMRTALQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGENNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLVNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNMLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPDERETRLWNKY-MSNTYEQLSKPDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGI-------SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
+G S ST P + S +++ P ++NG + G
Sbjct: 221 DGTWPRQTLQSKSSTSRAFTTSPKSAASSYSSMSASP-ITNGDSANSS-----GVHSSGL 274
Query: 298 FMDMDDGYDSYNT--AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSD 354
+SY+ ++ + GL GL NLGNTCFMNSALQCL +T L +YFL D Y
Sbjct: 275 SRGGSGFSNSYSCRESQSHTQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEA 334
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
EIN +NPLGM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQEL
Sbjct: 335 EINRDNPLGMKGEIAEAYAELIKQMWSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQEL 394
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KS
Sbjct: 395 LAFLLDGLHEDLNRVKKKPYLELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKS 454
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
TLVCP CSK+S+TFDPF YLTLPLP RTM V + A+ P + VT+ G D
Sbjct: 455 TLVCPECSKISVTFDPFCYLTLPLPLKKDRTMEVFLVSADPQCRPTQYRVTVPMMGAVSD 514
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKI 594
L ALS + E +++ +VYNH+ + F+ L + D+ V + + G
Sbjct: 515 LCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMTRDDIFVYEVCNTAEDGSE 573
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PL- 648
+ ++E+ S L+G PL+ + + L+ + + + +S PL
Sbjct: 574 CVTFPVYFRERKIRQTSSSSGTVLYGQPLLISVPKHKLTLDYLYQVICERISRYIKHPLP 633
Query: 649 ----RRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDER 704
R SA +G NG +E+ + + + E E CS E + L +E
Sbjct: 634 DDSPRPHLDSATYNGS--NGICEGEEEEMEHQDDSKGQATETES-CSTEDCSEHELGNE- 689
Query: 705 ISSCKPIQK-------------------------DSILKPGKHIK------VLLDWTDDV 733
SC+ + K +S+ GK +K V +DW +
Sbjct: 690 --SCQNVPKRVRSQHCKKRLFTFSLVNSYGTTDINSLAADGKLLKLNSRSTVAVDWDTET 747
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
L+ + H + +K ++ ++L C++ F T E LG D WYCP CK+H+
Sbjct: 748 RCLHYDEQESEAYDKHSSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQ 807
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QATKK DLW LP VLV HLKRFSY+RY ++KLDT V FPI +L +S+++ YVYD
Sbjct: 808 QATKKFDLWSLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPYVYD 867
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+SNHYG +G GHYTAYAK
Sbjct: 868 LIAVSNHYGAMGVGHYTAYAK 888
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 334/898 (37%), Positives = 465/898 (51%), Gaps = 113/898 (12%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q +L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-YPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G T
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQT--- 228
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
Q GS F ++ Y+ +
Sbjct: 229 -------------------------------QQSNGSGFSAS-------YNCQESPLTHV 250
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +
Sbjct: 251 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 310
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY
Sbjct: 311 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY 370
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YL
Sbjct: 371 LELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYL 430
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
TLPLP R M + + A+ P + V + G DL ALS + E +++
Sbjct: 431 TLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSKLSGIAA-ENMVVT 489
Query: 555 EVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGK-IKLEIVNRWQEKSASDYLK 612
+VYNH+ + F+ L + +DD + R G + + L + R ++ S
Sbjct: 490 DVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVRSTSPDGSECVTLPVYFRERKSRPSSTST 549
Query: 613 GSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGF-- 665
G+ L+G PL+ + + L+ + AV + +S PL S+ G NG
Sbjct: 550 GA--VLYGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLPDESGSSPLELGACNGSRS 607
Query: 666 -------------------LPEVI----DELSNSHNESVETAELEDLCSRELSFQLSLTD 702
L E DE + H E+ + C R L F SL
Sbjct: 608 GCAGEDEEEMEHQEEGREQLSETEGSGDDEPGSDHGEATQKKSKGRPCPRRL-FTFSL-- 664
Query: 703 ERISSCKPIQKDSILKPGKHIKVL------LDWTDDVHELYDPSYIKDLPVVHKTGFTVK 756
++S +S+ GK +K+ +DW + Y + H + +
Sbjct: 665 --VNSYGTADINSLATDGKLLKLTSRSTLAIDWDSETRSRYYNEQESETYEKHVSMLQPQ 722
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFS
Sbjct: 723 KKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFS 782
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 783 YNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGAMGVGHYTAYAK 840
>gi|417405393|gb|JAA49408.1| Putative ubiquitin carboxyl-terminal hydrolase 15 [Desmodus
rotundus]
Length = 952
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 324/898 (36%), Positives = 485/898 (54%), Gaps = 116/898 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ +++NH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIFNHRFHRIFAMDENLS 512
Query: 573 SSIKDDE-HIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S I+ DE ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIIERDEIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNS 676
++ + ++ ++ + + G NG P I E
Sbjct: 573 TEDKLYNLLLLRMCRYVKISTETEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 677 HNESVETAEL---------ED-----------LCSRE-------------LSFQL-SLTD 702
+ES + EL ED LC+ E +FQ +L +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGN 692
Query: 703 ERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVK 756
I+ K + D L+ + + LDW D+ + Y D + +D + K
Sbjct: 693 TDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--K 750
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFS
Sbjct: 751 PPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFS 810
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 811 YSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|444721227|gb|ELW61972.1| Ubiquitin carboxyl-terminal hydrolase 15 [Tupaia chinensis]
Length = 952
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 331/928 (35%), Positives = 496/928 (53%), Gaps = 123/928 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY + + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMESQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSAPNPKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYLEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKIVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTDTEETEGSL 602
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 603 HCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 662
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 663 NGLCTEETCKGQLMGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 722
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 723 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYC 780
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 781 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPN 840
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 AGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|345776465|ref|XP_860477.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 10
[Canis lupus familiaris]
Length = 952
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 319/903 (35%), Positives = 485/903 (53%), Gaps = 126/903 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN--------- 675
++ + ++ ++ + + + G NG P I E +
Sbjct: 573 TEDKLYNLLLLRMCRYVKISTEAEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 676 -----------SHNESVETAE-------------LEDLCSRELS------FQLSLTDERI 705
S NE+ ++ + E+ C +L+ F +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGN 692
Query: 706 SSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPVVHKT 751
+ I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 693 TDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESV 747
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV H
Sbjct: 748 EY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVH 805
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
LKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA
Sbjct: 806 LKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTA 865
Query: 872 YAK 874
+AK
Sbjct: 866 FAK 868
>gi|301768453|ref|XP_002919643.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Ailuropoda melanoleuca]
Length = 952
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 319/903 (35%), Positives = 485/903 (53%), Gaps = 126/903 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 513 SIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 572
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN--------- 675
++ + ++ ++ + + + G NG P I E +
Sbjct: 573 TEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 632
Query: 676 -----------SHNESVETAE-------------LEDLCSRELS------FQLSLTDERI 705
S NE+ ++ + E+ C +L+ F +
Sbjct: 633 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGN 692
Query: 706 SSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPVVHKT 751
+ I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 693 TDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESV 747
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV H
Sbjct: 748 EY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVH 805
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
LKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA
Sbjct: 806 LKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTA 865
Query: 872 YAK 874
+AK
Sbjct: 866 FAK 868
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 336/907 (37%), Positives = 466/907 (51%), Gaps = 110/907 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L G +G + Y + P S
Sbjct: 221 DGTW---------------PRQTLQSNG-----SGFSASYNCQEPPSSHI---------- 250
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLG
Sbjct: 251 -----------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 299
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS A APR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 300 MKGEIAEAYAELIKQMWSGRDAHAAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 359
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD A E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 360 EDLNRVKKKPYLELKDANGRPDAVAAEEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 419
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 420 VSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLS 479
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++A+VYNH+ + F+ L + D+ V G + + ++
Sbjct: 480 GIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFR 538
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAH 658
E+ + S L+ PL+ + + L+ + AV +S PL + S+
Sbjct: 539 ERKSRPSSTSSASALYEQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLE 598
Query: 659 GGKENGF---------------------LPEV----IDELSNSHNESVETAELEDLCSRE 693
G NG L E DE N +E+ + C +
Sbjct: 599 PGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQPCPKR 658
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPV 747
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 659 L-FTFSL----VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYE 713
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +
Sbjct: 714 KHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKI 773
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G G
Sbjct: 774 LVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVG 833
Query: 868 HYTAYAK 874
HYTAYAK
Sbjct: 834 HYTAYAK 840
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 339/921 (36%), Positives = 474/921 (51%), Gaps = 90/921 (9%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--YRERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS + V + PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDVYDVGEQNL-YPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T G
Sbjct: 220 EDGTWPRQTQQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMH 272
Query: 294 FGSTFMDMDDGYDSYNTAKK---GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNCQESPLTHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M + + A+ P + V +
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
G + + ++E+ + + L+G PL+ + + L+ + AV + +S
Sbjct: 572 PDGSECVTLPVYFRERKSRPSSTSTGAVLYGQPLLVSVPKHKLTLESLYQAVCERISRYI 631
Query: 647 --PLRRTYSSAKAHGGKENGF---------------------LPEVI----DELSNSHNE 679
PL S+ G NG L E DE + H E
Sbjct: 632 KQPLPDESGSSPLELGACNGSRSGCAGEDEEEMEHQEEGREQLSETEGSGDDEPGSDHGE 691
Query: 680 SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDV 733
+ + C R L F SL ++S +S+ GK +K + +DW +
Sbjct: 692 ATQKKNKGRPCPRRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSET 746
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
Y + H + +K ++ A++L C++ F T E LG D WYCP CK+H+
Sbjct: 747 RSCYYNEQESETYEKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQ 806
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYD
Sbjct: 807 QATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYD 866
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+SNHYG +G GHYTAYAK
Sbjct: 867 LIAVSNHYGAMGVGHYTAYAK 887
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 338/912 (37%), Positives = 473/912 (51%), Gaps = 117/912 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCGQ-RPDAETQ-KSELGALMRTALQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGENNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLVNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNMLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPDERETRLWNKY-MSNTYEQLSKPDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L Q GS F +++
Sbjct: 221 DGTW---------------PRQTL-------------------QSKGSGFSNSY------ 240
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
S ++ + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 241 --SCRESQSHTQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPLG 298
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 299 MKGEIAEAYAELIKQMWSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 358
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP CSK
Sbjct: 359 EDLNRVKKKPYLELKDANGRPDLVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECSK 418
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+S+TFDPF YLTLPLP RTM V + A+ P + VT+ G DL ALS
Sbjct: 419 ISVTFDPFCYLTLPLPLKKDRTMEVFLVSADPQCRPTQYRVTVPMMGAVSDLCEALSKLS 478
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++ +VYNH+ + F+ L + D+ V + + G + ++
Sbjct: 479 GIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMTRDDIFVYEVCNTAEDGSECVTFPVYFR 537
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PL-----RRTYS 653
E+ S L+G PL+ + + L+ + + + +S PL R
Sbjct: 538 ERKIRQTSSSSGTVLYGQPLLISVPKHKLTLDYLYQVICERISRYIKHPLPDDSPRPHLD 597
Query: 654 SAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQK 713
SA +G NG +E+ + + + E E CS E + L +E SC+ + K
Sbjct: 598 SATYNGS--NGICEGEEEEMEHQDDSKGQATETES-CSTEDCSEHELGNE---SCQNVPK 651
Query: 714 -------------------------DSILKPGKHIK------VLLDWTDDVHELYDPSYI 742
+S+ GK +K V +DW + L+
Sbjct: 652 RVRSQHCKKRLFTFSLVNSYGTTDINSLAADGKLLKLNSRSTVAVDWDTETRCLHYDEQE 711
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
+ H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW
Sbjct: 712 SEAYDKHSSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLW 771
Query: 803 MLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYG 862
LP VLV HLKRFSY+RY ++KLDT V FPI +L +S+++ YVYDL A+SNHYG
Sbjct: 772 SLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPYVYDLIAVSNHYG 831
Query: 863 GLGGGHYTAYAK 874
+G GHYTAYAK
Sbjct: 832 AMGVGHYTAYAK 843
>gi|403269026|ref|XP_003926559.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Saimiri boliviensis boliviensis]
Length = 981
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 333/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEET 627
Query: 658 HGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE----- 685
G NG P I E + S NE+ ++ +
Sbjct: 628 EGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 --------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|355330276|ref|NP_001239007.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Homo sapiens]
gi|28381406|sp|Q9Y4E8.3|UBP15_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15; AltName:
Full=Unph-2; AltName: Full=Unph4
gi|5231133|gb|AAD41086.1|AF153604_1 ubiquitin-specific protease homolog [Homo sapiens]
gi|119617511|gb|EAW97105.1| ubiquitin specific peptidase 15, isoform CRA_b [Homo sapiens]
gi|355786266|gb|EHH66449.1| Ubiquitin carboxyl-terminal hydrolase 15 [Macaca fascicularis]
Length = 981
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 333/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNMNNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEET 627
Query: 658 HGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE----- 685
G NG P I E + S NE+ ++ +
Sbjct: 628 EGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 --------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|114644046|ref|XP_509182.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 6 [Pan
troglodytes]
gi|297692321|ref|XP_002823509.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Pongo abelii]
gi|397508878|ref|XP_003824866.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Pan
paniscus]
Length = 981
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 333/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNMNNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEET 627
Query: 658 HGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE----- 685
G NG P I E + S NE+ ++ +
Sbjct: 628 EGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 --------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|296212204|ref|XP_002752722.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Callithrix jacchus]
Length = 981
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 333/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEET 627
Query: 658 HGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE----- 685
G NG P I E + S NE+ ++ +
Sbjct: 628 EGSLHSCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 --------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|350584209|ref|XP_003481694.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Sus
scrofa]
Length = 981
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 328/902 (36%), Positives = 498/902 (55%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALST + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------E 672
+ ++ + ++ ++ + + + G NG P I E
Sbjct: 598 PRNNTEDKLYNLLLVRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 673 LSNSHNESVETAEL---------ED-----------LCSRE-------------LSFQL- 698
+ES + EL ED LC+ E +FQ
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFN 717
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVE 777
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 778 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 835
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 836 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 895
Query: 873 AK 874
AK
Sbjct: 896 AK 897
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 507 bits (1306), Expect = e-140, Method: Compositional matrix adjust.
Identities = 336/917 (36%), Positives = 472/917 (51%), Gaps = 83/917 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCGE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M + PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYSMGQHNV-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + R ++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRTVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T ++ PSR+ T ++NG ++ S
Sbjct: 221 DGTWPRQTLQSIS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSSSTSGMH--SSGV 276
Query: 295 GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YS 353
Y+ A + GL GL NLGNTCFMNSALQCL +T L YFL D Y
Sbjct: 277 SRGGSGFSASYNCQEPASSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYE 336
Query: 354 DEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
EIN NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQE
Sbjct: 337 AEINRINPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQE 396
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
LLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NHK RNDS+IVD F G +K
Sbjct: 397 LLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHKLRNDSVIVDTFHGLFK 456
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
STLVCP C KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 457 STLVCPECFKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYHVTVPLMGAVS 516
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
DL ALS + E +++ +VYNH+ + F+ L + D+ V G
Sbjct: 517 DLCEALSRLSGISA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGS 575
Query: 594 IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PL 648
+ + ++E+ + S L+G PL+ + ++ L+ + AV +S PL
Sbjct: 576 ECVTLPVYFRERKSRPSSTSSGAALYGQPLLLSVPKQKLTLDSLYQAVCDRISRYVKQPL 635
Query: 649 RRTYSSAKAHGGKENGFLPEV-------------------------IDELSNSHNESVET 683
+ S+ G +G D++ N E+ +
Sbjct: 636 PDEFGSSPLEPGACSGSRNSCEGDDEEEMEHQEEGNEQPLETKGSGEDDMGNDPGETTQK 695
Query: 684 AELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELY 737
C + L F SL ++S +S+ GK +K + +DW + LY
Sbjct: 696 KIKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLY 750
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
+ H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATK
Sbjct: 751 YDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATK 810
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI 857
K DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ ++ YVYDL A+
Sbjct: 811 KFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPYVYDLIAV 870
Query: 858 SNHYGGLGGGHYTAYAK 874
SNHYG +G GHYTAYAK
Sbjct: 871 SNHYGAMGVGHYTAYAK 887
>gi|147899880|ref|NP_001082452.1| ubiquitin specific peptidase 4 (proto-oncogene) [Xenopus laevis]
gi|84570095|gb|AAI10726.1| LOC398480 protein [Xenopus laevis]
Length = 975
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 333/919 (36%), Positives = 489/919 (53%), Gaps = 98/919 (10%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
G + PC + +L LK+G+ ++LI +RW++ W++YV D + N+
Sbjct: 26 GPTAEPCKSADTETQKAELGELLKTTLKKGDEWYLIDSRWFKQWKKYVGFDAWDVYNVGE 85
Query: 74 DSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKL 133
S + PGP+DNS + + D ++ +L + DYVLVP + W+KL
Sbjct: 86 SSLY-----------PGPVDNSGLF------PDPDTQVLKEHLIDELDYVLVPTEAWQKL 128
Query: 134 FCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQL 189
WY +G + RK++ G+ V +VEV+ + LKL D D + R KA T
Sbjct: 129 MNWYGSVEGQHPIVRKVVEHGLFVKNCKVEVYLIELKLCDDSDPENVITRHFSKADTIDT 188
Query: 190 YEKVCKLRGI----EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDN 245
EK ++R I + + R+W+ + + L + T+ DA L Q I +E + +
Sbjct: 189 IEK--EMRNIFNISAETETRLWNRY-MTNTYEQLTKKESTVQDAGLYQGQMIAIEKRNAD 245
Query: 246 GI------SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFM 299
G + ST +S +++NG ++ + N G + G
Sbjct: 246 GTWPRQSQTKSSTATSRTFATSGKPSTSSYSTSSSSMTNGDSSTHALNNSSGLNKG---- 301
Query: 300 DMDDGYD----SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSD 354
GY SY+ + + GL GL NLGNTCFMNSALQCL ++P L +YFL D Y
Sbjct: 302 ----GYTPSYSSYSYRESSSQPGLCGLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEYKK 357
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
EIN ENPLGM GE+A+A+ +L+R++WS + VAPR FK ++ RFAPQFSGY Q DSQEL
Sbjct: 358 EINRENPLGMKGEIAVAYAELIRQIWSGDHSYVAPRMFKTQVGRFAPQFSGYQQQDSQEL 417
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH RN+S+IVD+F G +KS
Sbjct: 418 LAFLLDGLHEDLNRVKKKPYLELKDANGRPDSIVAAEAWENHLRRNNSIIVDIFHGLFKS 477
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
TLVCP C KVS+TFDPF YLTLPLP RTM V ++ P + +T+ K G D
Sbjct: 478 TLVCPECHKVSVTFDPFCYLTLPLPMKKDRTMEVFFVRSDPHCKPKQYRLTVPKMGVVLD 537
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK 593
L ALS ++ E +++ +VYNH+ + F+ E++S I + + I Y RK
Sbjct: 538 LCSALSKISDVQA-ENMVVTDVYNHRFHKIFQM-DEMLSHIMERDDIFVYEVKPRKAEDW 595
Query: 594 IKLEIV---NRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
+ L I R+++ +++ + LFG PL+ + + +L+ +DI +L ++R
Sbjct: 596 VTLPICFRERRYRQATSTGTV------LFGQPLMISVPKHNLT---LDILYENVLDRIKR 646
Query: 651 --------TYSSAKAHGGKENGFLPEVIDELSN--------------SHNESVETAELED 688
Y+ NG E DE+ + +ESVE E
Sbjct: 647 YVKNPHPELYTCLSTDSEACNGSNGECDDEMDHQEEDQEESQEETNGQSDESVEEENSEG 706
Query: 689 LCS------------RELSFQLSLTDERISS-CKPIQKDSILKPGKHIKVLLDWTDDVHE 735
CS R+ F SL + ++ + LK V +DW + +
Sbjct: 707 GCSPCNKMPKKALECRKRLFTFSLVNSYATAEVGSMPAKGYLKLSSFATVAIDWDSESKK 766
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
L+ + H++ +K ++ ++L C+ F E LG D WYCP CK+H++A
Sbjct: 767 LFYDDQEAEAFDKHESMMQPQK-KKVTVALRECIQLFTKTETLGEHDPWYCPNCKKHQRA 825
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLF 855
TKK DLW LP +LV HLKRFSY+R+ ++KLD V FPI +L++S+++ +VYDL
Sbjct: 826 TKKFDLWSLPKILVVHLKRFSYNRFWRDKLDAVVEFPIRDLNMSEFVCDPQAGPFVYDLV 885
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+S+HYGG+GGGHYTAYAK
Sbjct: 886 AVSDHYGGMGGGHYTAYAK 904
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 338/908 (37%), Positives = 474/908 (52%), Gaps = 86/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q +L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 47 PDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 95
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 96 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 148
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 149 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 208
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 209 FNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQS 267
Query: 249 MDSTGNDLALVPIEPSRSSLTIAGGPA--LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
ST P P+ S+ + A ++NG +T G
Sbjct: 268 KSSTAPSRNF-PTSPTSSASPFSSVSASPIANGDSTNTS-----GMHSSGVSRGGSGFSA 321
Query: 307 SYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 322 SYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL 381
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 382 GMKGEIAEAYAELIKQMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 441
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 442 HEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 501
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M V + A+ P + V + G DL ALS
Sbjct: 502 KVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSRL 561
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ L + D+ V G + + +
Sbjct: 562 SGVAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCGTSADGSECVTLPVYF 620
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + + L+ + AV + +S PL S+ +
Sbjct: 621 RERKSRPSNTSSGAVLYGQPLLVSVAKHKLTLESLYQAVCERISRYIKQPLPEESGSSSS 680
Query: 658 HGGKENG---------------------FLPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DE+ H E+ + C +
Sbjct: 681 EPGACNGSRGNYEGEDEEEMEHQEEGRELLSETEGSGEDEVGGDHGETTQKKVKGQPCPK 740
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 741 RL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAY 795
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 796 EKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 855
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ Y+YDL A+SNHYG +G
Sbjct: 856 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYMYDLIAVSNHYGAMGV 915
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 916 GHYTAYAK 923
>gi|355564419|gb|EHH20919.1| Ubiquitin carboxyl-terminal hydrolase 15, partial [Macaca mulatta]
Length = 976
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 325/902 (36%), Positives = 497/902 (55%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 19 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 67
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 68 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 121
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 122 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKY-MS 180
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 181 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 233
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 234 PKISPSSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 293
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 294 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 353
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 354 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 413
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 414 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 473
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 474 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADK-MIVTDIYNHRFHRIFAMD 532
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 533 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 592
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN----- 675
+ ++ + ++ ++ + + + G NG P I E +
Sbjct: 593 PRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 652
Query: 676 ---------------SHNESVETAE-------------LEDLC--------SRELSFQL- 698
S NE+ ++ + ED C R +FQ
Sbjct: 653 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKRLFTFQFN 712
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 713 NLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVE 772
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 773 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 830
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 831 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 890
Query: 873 AK 874
AK
Sbjct: 891 AK 892
>gi|149066659|gb|EDM16532.1| ubiquitin specific peptidase 15, isoform CRA_a [Rattus norvegicus]
Length = 981
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 335/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSAPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVI 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEET 627
Query: 658 HGGKE-------NGFLPEVID--------ELSNSHNESVETAEL---------ED----- 688
G NG P I E +ES + EL ED
Sbjct: 628 DGPLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 689 ------LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
LC+ E +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|27503316|gb|AAH42353.1| LOC398480 protein [Xenopus laevis]
Length = 973
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 335/921 (36%), Positives = 492/921 (53%), Gaps = 100/921 (10%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
G + PC + +L LK+G+ ++LI +RW++ W++YV D + N+
Sbjct: 22 GPTAEPCKSADTETQKAELGELLKTTLKKGDEWYLIDSRWFKQWKKYVGFDAWDVYNVGE 81
Query: 74 DSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKL 133
S + PGP+DNS + + D ++ +L + DYVLVP + W+KL
Sbjct: 82 SSLY-----------PGPVDNSGLF------PDPDTQVLKEHLIDELDYVLVPTEAWQKL 124
Query: 134 FCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQL 189
WY +G + RK++ G+ V +VEV+ + LKL D D + R KA T
Sbjct: 125 MNWYGSVEGQHPIVRKVVEHGLFVKNCKVEVYLIELKLCDDSDPENVITRHFSKADTIDT 184
Query: 190 YEKVCKLRGI----EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDN 245
EK ++R I + + R+W+ + + L + T+ DA L Q I +E + +
Sbjct: 185 IEK--EMRNIFNISAETETRLWNRY-MTNTYEQLTKKESTVQDAGLYQGQMIAIEKRNAD 241
Query: 246 GI--------SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
G S +T A + S T + +++NG ++ + N G + G
Sbjct: 242 GTWPRQSQTKSSTATSRTFATSGKPSTSSYSTSSSSSSMTNGDSSTHALNNSSGLNKG-- 299
Query: 298 FMDMDDGYD----SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-Y 352
GY SY+ + + GL GL NLGNTCFMNSALQCL ++P L +YFL D Y
Sbjct: 300 ------GYTPSYSSYSYRESSSQPGLCGLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEY 353
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
EIN ENPLGM GE+A+A+ +L+R++WS + VAPR FK ++ RFAPQFSGY Q DSQ
Sbjct: 354 KKEINRENPLGMKGEIAVAYAELIRQIWSGDHSYVAPRMFKTQVGRFAPQFSGYQQQDSQ 413
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
ELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH RN+S+IVD+F G +
Sbjct: 414 ELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSIVAAEAWENHLRRNNSIIVDIFHGLF 473
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCP C KVS+TFDPF YLTLPLP RTM V ++ P + +T+ K G
Sbjct: 474 KSTLVCPECHKVSVTFDPFCYLTLPLPMKKDRTMEVFFVRSDPHCKPKQYRLTVPKMGVV 533
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQG 591
DL ALS ++ E +++ +VYNH+ + F+ E++S I + + I Y RK
Sbjct: 534 LDLCSALSKISDVQA-ENMVVTDVYNHRFHKIFQM-DEMLSHIMERDDIFVYEVKPRKAE 591
Query: 592 GKIKLEIV---NRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPL 648
+ L I R+++ +++ + LFG PL+ + + +L+ +DI +L +
Sbjct: 592 DWVTLPICFRERRYRQATSTGTV------LFGQPLMISVPKHNLT---LDILYENVLDRI 642
Query: 649 RR--------TYSSAKAHGGKENGFLPEVIDELSN--------------SHNESVETAEL 686
+R Y+ NG E DE+ + +ESVE
Sbjct: 643 KRYVKNPHPELYTCLSTDSEACNGSNGECDDEMDHQEEDQEESQEETNGQSDESVEEENS 702
Query: 687 EDLCS------------RELSFQLSLTDERISS-CKPIQKDSILKPGKHIKVLLDWTDDV 733
E CS R+ F SL + ++ + LK V +DW +
Sbjct: 703 EGGCSPCNKMPKKALECRKRLFTFSLVNSYATAEVGSMPAKGYLKLSSFATVAIDWDSES 762
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
+L+ + H++ +K ++ ++L C+ F E LG D WYCP CK+H+
Sbjct: 763 KKLFYDDQEAEAFDKHESMMQPQK-KKVTVALRECIQLFTKTETLGEHDPWYCPNCKKHQ 821
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
+ATKK DLW LP +LV HLKRFSY+R+ ++KLD V FPI +L++S+++ +VYD
Sbjct: 822 RATKKFDLWSLPKILVVHLKRFSYNRFWRDKLDAVVEFPIRDLNMSEFVCDPQAGPFVYD 881
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+S+HYGG+GGGHYTAYAK
Sbjct: 882 LVAVSDHYGGMGGGHYTAYAK 902
>gi|395852084|ref|XP_003798572.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Otolemur garnettii]
Length = 981
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 335/932 (35%), Positives = 507/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + S V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMSNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLAKPMQYKVVVPKIGNILDLCAA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTDTEDT 627
Query: 658 HGGKE-------NGFLPEVID--------ELSNSHNESVETAEL---------ED----- 688
G NG P I E +ES + EL ED
Sbjct: 628 EGPPHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 689 ------LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
LC+ E +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPELKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|119617510|gb|EAW97104.1| ubiquitin specific peptidase 15, isoform CRA_a [Homo sapiens]
Length = 984
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 329/933 (35%), Positives = 503/933 (53%), Gaps = 101/933 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTI-----AGGPALSNGHTTGYRFNQYPGSSFGSTF 298
++G T P P S+ + + + + + S++
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNMNNRNSSSVKNSNYCLPS 270
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEIN 357
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 271 YTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELN 330
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAF
Sbjct: 331 FDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAF 390
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
LLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLV
Sbjct: 391 LLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLV 450
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL
Sbjct: 451 CPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCT 510
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKL 596
ALS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 511 ALSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVI 569
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 570 IPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEE 629
Query: 657 AHGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE---- 685
G NG P I E + S NE+ ++ +
Sbjct: 630 TEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGG 689
Query: 686 ---------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKH 722
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 690 DNDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDER 749
Query: 723 IKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPD 781
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +
Sbjct: 750 SFLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAE 807
Query: 782 DMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKY 841
D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S++
Sbjct: 808 DPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEF 867
Query: 842 MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 868 LINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 900
>gi|291389467|ref|XP_002711348.1| PREDICTED: ubiquitin specific peptidase 15 isoform 2 [Oryctolagus
cuniculus]
Length = 981
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 332/932 (35%), Positives = 509/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVSADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVII 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEET 627
Query: 658 HGGKE-------NGFLPEVIDELSN--------------------SHNESVETAE----- 685
G NG P I E + S NE+ ++ +
Sbjct: 628 EGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 --------LEDLCSREL--------SFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
ED C +L +FQ +L + I+ K + D L+ +
Sbjct: 688 NDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPELKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 337/919 (36%), Positives = 472/919 (51%), Gaps = 87/919 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNRY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STVPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQESPSSHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+K+S+TFDPF YLTLPLP R M + + A+ P + V + G
Sbjct: 454 LFKSTLVCPECAKISVTFDPFCYLTLPLPLKKDRVMEIFLVPADPHCRPTQYRVIVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGVAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSM 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS---- 646
G + + ++E+ + + L+G PL+ + + L+ + AV + +S
Sbjct: 573 DGSECITLPVYFRERKSRPSSTSTGAVLYGQPLLVSVPKHKLTLEFLYQAVCERISRYIK 632
Query: 647 -PLRRTYSSAKAHGGKENGF---------------------LPEVI---DELSNSHNESV 681
PL S+ G NG L E ++ S S
Sbjct: 633 QPLPDESGSSPLEPGACNGSRGSCEGEDEEEMEHQEEGREQLSETEGSGEDESGSDRGET 692
Query: 682 ETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHE 735
+L+D E F SL ++S +S+ GK +K + +DW +
Sbjct: 693 SQKKLKDRPCPERLFTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRN 748
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
Y + H + +K ++ A++L C++ F T E LG D WYCP CK+H+QA
Sbjct: 749 RYYDEQESEAYEKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQA 808
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLF 855
TKK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL
Sbjct: 809 TKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLI 868
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 869 AVSNHYGAMGVGHYTAYAK 887
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 331/904 (36%), Positives = 464/904 (51%), Gaps = 107/904 (11%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G T ++P+ S G + Y + P S
Sbjct: 221 DGTWPRQT--------LQPNGS------------GFSASYNCQESPSSHI---------- 250
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLG
Sbjct: 251 -----------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLG 299
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLH
Sbjct: 300 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLH 359
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 360 EDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 419
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 420 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPCCRPTQYRVTVPLMGAVSDLCEALSRLS 479
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
+ E +++ +VYNH+ + F+ L + D+ V G + + ++
Sbjct: 480 GIAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSASADGSECVTLPVYFR 538
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAH 658
E+ + S L+G PL+ + + L+ + AV + +S PL S+
Sbjct: 539 ERKSRPSSTSSGAVLYGQPLLLSVPKHKLTLESLYQAVCERISRYIKQPLPDEPGSSPLE 598
Query: 659 GGKENG----------------------FLPEVIDELSNSHNESVETAELEDLCSRELSF 696
G NG +E+++ C + L F
Sbjct: 599 LGACNGSRGSCEGEQEEEMEHQEEGKEELSETEGSGEEELGSETIQKKVEGQTCPKRL-F 657
Query: 697 QLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHK 750
SL ++S +S+ GK +K + +DW + LY + H
Sbjct: 658 TFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRNLYYDEQESEAYEKHV 713
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +K ++ +++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV
Sbjct: 714 SMLQPQKKKKTSVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVV 773
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
HLKRFSY+RY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G GHYT
Sbjct: 774 HLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGVGHYT 833
Query: 871 AYAK 874
AYAK
Sbjct: 834 AYAK 837
>gi|426224799|ref|XP_004006556.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Ovis
aries]
Length = 981
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 328/902 (36%), Positives = 495/902 (54%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLR 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA QCL +TP L +YFL D Y DE+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAFQCLSNTPPLTEYFLNDKYQDELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------E 672
+ ++ + ++ ++ + + G NG P I E
Sbjct: 598 PRNNTEDKLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 673 LSNSHNESVETAEL---------ED-----------LCSRE-------------LSFQL- 698
+ES + EL ED LC+ E +FQ
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFN 717
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVE 777
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 778 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 835
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 836 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 895
Query: 873 AK 874
AK
Sbjct: 896 AK 897
>gi|224093937|ref|XP_002186908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Taeniopygia guttata]
Length = 953
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 327/902 (36%), Positives = 486/902 (53%), Gaps = 124/902 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRHNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F E +
Sbjct: 454 MDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIF-GMDENL 511
Query: 573 SSI--KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
SSI +DD ++ +R + + ++ I +EK S LFG P + +
Sbjct: 512 SSIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSLLFGQPFLIAVPRN 570
Query: 631 HLSGADIDIAVSKLLSPLRRTYSS---------AKAHGGKENGFLPEVID--------EL 673
+ ++ + ++ ++ S K HG NG P I E
Sbjct: 571 NTEDKLYNLLLLRMCRYVKTCTESEDTEGSLHCCKDHGINGNG--PNGIHEEGSPSEMET 628
Query: 674 SNSHNESVETAEL-------------------------EDLC---------SRELSFQL- 698
+ES + EL ED C R +FQ
Sbjct: 629 DEQDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQPLTGHKKRLFTFQFN 688
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D + + + LDW ++ + Y D S +D
Sbjct: 689 NLGNTDINYIKDDTRHIRFDDRQPRLDERSFLALDWDPELKKRYFDDSAAEDFEKHESVE 748
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K +++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 749 Y--KPSKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 806
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 807 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 866
Query: 873 AK 874
AK
Sbjct: 867 AK 868
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 338/908 (37%), Positives = 473/908 (52%), Gaps = 86/908 (9%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q +L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 9 PDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 57
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 58 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 110
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 111 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 170
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 171 FNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQS 229
Query: 249 MDSTGNDLALVPIEPSRSSLTIAGGPA--LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
ST P P+ S+ + A ++NG +T G
Sbjct: 230 KSSTAPSRNF-PTSPTSSASPFSSVSASPIANGDSTNTS-----GMHSSGVSRGGSGFSA 283
Query: 307 SYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPL
Sbjct: 284 SYNCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL 343
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 344 GMKGEIAEAYAELIKQMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 403
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+
Sbjct: 404 HEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECA 463
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP R M V + A+ P + V + G DL ALS
Sbjct: 464 KVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSRL 523
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E + ++VYNH+ + F+ L + D+ V G + + +
Sbjct: 524 SGVAA-ENVRQSDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCGTSADGSECVTLPVYF 582
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+E+ + S L+G PL+ + + L+ + AV + +S PL S+ +
Sbjct: 583 RERKSRPSNTSSGAVLYGQPLLVSVAKHKLTLESLYQAVCERISRYIKQPLPEESGSSSS 642
Query: 658 HGGKENG---------------------FLPEV----IDELSNSHNESVETAELEDLCSR 692
G NG L E DE+ H E+ + C +
Sbjct: 643 EPGACNGSRGNYEGEDEEEMEHQEEGRELLSETEGSGEDEVGGDHGETTQKKVKGQPCPK 702
Query: 693 ELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLP 746
L F SL ++S +S+ GK +K + +DW + LY +
Sbjct: 703 RL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAY 757
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP
Sbjct: 758 EKHVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPK 817
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+LV HLKRFSY+RY ++KLDT V FP+ L++S+++ Y+YDL A+SNHYG +G
Sbjct: 818 ILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYMYDLIAVSNHYGAMGV 877
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 878 GHYTAYAK 885
>gi|29747941|gb|AAH50042.1| Ubiquitin specific peptidase 15 [Mus musculus]
Length = 981
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 331/932 (35%), Positives = 507/932 (54%), Gaps = 102/932 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-VSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVI 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
V ++ S Y + LFG P + + + ++ + ++ ++ + + +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFLMAIPRNNTEDKLYNLLLLRMCRYVKMSTETEET 627
Query: 658 HG--------------------------------GKENGFLPEVIDELSNSHNESVETAE 685
G G E+ E+ E NS +E +
Sbjct: 628 DGHLRCCEDQNINGNGPNGLHEEGSPSEMETDEPGDESSQDQELPSENENSQSEDSVGGD 687
Query: 686 LED---LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHI 723
+ LC+ E +FQ +L + I+ K D L+ +
Sbjct: 688 NDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNNDINYIKDDTSHIRFDDRQLRLDERS 747
Query: 724 KVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEELGAED 805
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 806 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFL 865
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 339/918 (36%), Positives = 478/918 (52%), Gaps = 86/918 (9%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L+ L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCGE-RPDAETQ-KSELRALLRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTV-IRLSKKAS 185
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + SK +
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENGDPTNMLSCHFSKADT 161
Query: 186 TRQLYEKVCKLRGIEQEK-ARIWD-YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
+ +K+ KL I E+ R+W+ Y N S L D T+ DA L Q +++E Q
Sbjct: 162 IATIEKKMRKLFNIPAERETRLWNKYMNN--SYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T A ++NG +T G
Sbjct: 220 EDGTWPRQTLQSKS--STVPSRNFTTSPKPSASPYSSASASPIANGDSTNTS-----GMH 272
Query: 294 FGSTFMDMDDGYDSYNTAK---KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + G+ GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNCQEPPSSHAQPGVCGLGNLGNTCFMNSALQCLSNTAPLTDYFLR 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A + +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAETYAELIKQMWSGRDAYVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKRDRVMEVFLVPADPHHRPTQYRVTVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G DL ALS + E +++ +VYNH+ + F+ L + D+ V
Sbjct: 513 GAVSDLCEALSRLSGVAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSAS 571
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS--- 646
+ G L + ++E+ + S L+G PL+ + + L+ + AV + +S
Sbjct: 572 EDGSECLLLSVYFRERRSRPSSTSSGAVLYGQPLLMSVPKHTLTLESLYQAVCERISRYI 631
Query: 647 --PLRRTYSSAKAHGG---------------------------KENGFLPEVIDELSNSH 677
PL S+ + G E G E DE +
Sbjct: 632 KQPLPAECGSSPSGSGACSRSRGGCEGEDEEEMEHLDEGKEQLSETGGSWE--DEPGSGP 689
Query: 678 NESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD-SILKPGKHIKVLLDWTDDVHEL 736
E+ +T + + C ++L ++ + ++ D +LK + ++W + L
Sbjct: 690 GETTQTIKGQP-CPKQLFSLNAVNSYGTADINALETDEELLKLNSGSTLAMNWDSETRSL 748
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
Y + H + +K ++ A++L C++ F T E LG D WYCP CK+H+QAT
Sbjct: 749 YYDEQESEAFEKHVSVLQPQKKKKTAMALRDCIELFTTMETLGEYDPWYCPNCKKHQQAT 808
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
KK DLW LP +LV HLKRFSYSRY ++KLDT V FPI L++S+++ YVYDL A
Sbjct: 809 KKFDLWALPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPSARPYVYDLIA 868
Query: 857 ISNHYGGLGGGHYTAYAK 874
+SNHYG +G GHYTAYAK
Sbjct: 869 VSNHYGAMGVGHYTAYAK 886
>gi|431892000|gb|ELK02447.1| Ubiquitin carboxyl-terminal hydrolase 15 [Pteropus alecto]
Length = 981
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 326/902 (36%), Positives = 496/902 (54%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDN+ +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNTGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------E 672
+ ++ + ++ ++ + + G NG P I E
Sbjct: 598 PRNNTEDKLYNLLLLRMCRYVKISTETEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 673 LSNSHNESVETAEL---------ED-----------LCSRE-------------LSFQL- 698
+ES + EL ED LC+ E +FQ
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLMGHKKRLFTFQFN 717
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVE 777
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 778 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 835
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 836 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 895
Query: 873 AK 874
AK
Sbjct: 896 AK 897
>gi|359065629|ref|XP_003586137.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Bos
taurus]
Length = 981
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 327/902 (36%), Positives = 495/902 (54%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLR 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------E 672
+ ++ + ++ ++ + + G NG P I E
Sbjct: 598 PRNNTEDKLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 673 LSNSHNESVETAEL---------ED-----------LCSRE-------------LSFQL- 698
+ES + EL ED LC+ E +FQ
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFN 717
Query: 699 SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVE 777
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 778 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 835
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 836 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAF 895
Query: 873 AK 874
AK
Sbjct: 896 AK 897
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 328/888 (36%), Positives = 469/888 (52%), Gaps = 89/888 (10%)
Query: 46 YFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSS 105
++LI +RW++ W++YV +DS M V + PGPIDNS + S
Sbjct: 42 WYLIDSRWFKQWKKYV----------GYDSWDMYHVGEQNL-YPGPIDNSGLF------S 84
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVF 161
+ ++ ++ +L + DYVLVP + W KL WY +G + RK++ G+ V +VEV+
Sbjct: 85 DPENQILKDHLIDELDYVLVPAEAWNKLVNWYGCIEGQQPIVRKVVEHGLFVKHCKVEVY 144
Query: 162 XLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQEK-ARIWDYFNKQRSTSPL 219
L LKL + D + + + SK + + +++ +L I +K R+W+ + + L
Sbjct: 145 LLELKLCQNSDPTNLLSCQFSKADTIATIEKEMRRLFNIPDDKETRLWNKY-MSNTYEQL 203
Query: 220 DVSDQTLDDAMLQMDQDILLEVQVDNGISMDST--------GNDLALVPIEPSRSSLTIA 271
+ D T+ DA L Q +++E+Q ++G T + S ++ +
Sbjct: 204 NKPDNTIQDAGLYQGQVLVIELQNEDGTWPRQTIQSKSSTTTSKNLTTTSPKSPTTYSPE 263
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLAGLQNLGNTC 329
P ++NG + + G S D +SYN G GL GL NLGNTC
Sbjct: 264 STPPITNGDSI-----KPSGVVSSSLSRGGSDFSNSYNCLDSGPHTHPGLCGLGNLGNTC 318
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSALQCL + L +YFL D Y EIN +NPLGM GE+A AF L++++WS A V
Sbjct: 319 FMNSALQCLSNIAPLTEYFLNDKYEAEINRDNPLGMKGEIAEAFAQLIKQMWSGRNAQVV 378
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E++D+ GRPD V
Sbjct: 379 PRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELQDANGRPDLVV 438
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W NH+ RNDS+IVD F G +KSTLVCP CSK+S+TFDPF YLTLPLP RTM +
Sbjct: 439 AKEAWDNHRLRNDSVIVDTFHGLFKSTLVCPQCSKISVTFDPFCYLTLPLPLKKDRTMEI 498
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ A+ P + VT+ G DL +LS + I E +L+ +VYNH+ + F+
Sbjct: 499 FLVSADPHCRPTQYRVTVPMMGSVSDLCRSLSKLSGVAI-ENMLVTDVYNHRFHKIFQMS 557
Query: 569 AELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
L + D+ V F + G + ++EK S L+G PL+
Sbjct: 558 DGLNHIMPRDDIFVYEVFSSTEDGFECVTFPVYFREKKNRQANTSSGTILYGQPLIISAP 617
Query: 629 EEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENG----FLPEVIDELSNSHNE 679
+ L+ + + + +S PL SS G NG F + ++E+ + NE
Sbjct: 618 KHKLTHDYLYQIICERISRYIKYPLMEDSSSHPMASGTCNGSSGTFEGKDLEEMEH-QNE 676
Query: 680 SVETAELEDLCSRELSFQLSLTDER----------------------ISSCKPIQKDSIL 717
E CS E + L ++ ++S S+
Sbjct: 677 DREPPTSTVTCSFEGRVEEKLGNDPSRYISKKITGQMYKKKLFSFSLVNSYGTTDISSLA 736
Query: 718 KPGKHIK------VLLDWTDDVHELY-----DPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
GK +K V +DW + LY +Y KD ++ +K ++ ++L
Sbjct: 737 ADGKLLKLNSRSTVAVDWDSETRSLYYDEQESEAYEKDGSMLQP-----QKKKKAPVALR 791
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
C+ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLD
Sbjct: 792 DCIGLFTTMETLGEHDPWYCPYCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLD 851
Query: 827 TFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
T V+FPI NL +S+++ Y+YDL A+SNHYG +G GHYTAYAK
Sbjct: 852 TQVDFPIRNLCMSEFICDPAAGPYIYDLIAVSNHYGAMGVGHYTAYAK 899
>gi|281348175|gb|EFB23759.1| hypothetical protein PANDA_008289 [Ailuropoda melanoleuca]
Length = 981
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 322/907 (35%), Positives = 496/907 (54%), Gaps = 105/907 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSAPKSPGASNFSAL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN----- 675
+ ++ + ++ ++ + + + G NG P I E +
Sbjct: 598 PRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 676 ---------------SHNESVETAE-------------LEDLCSRELS------FQLSLT 701
S NE+ ++ + E+ C +L+ F
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFN 717
Query: 702 DERISSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPV 747
+ + I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEK 772
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP V
Sbjct: 773 HESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPV 830
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGG
Sbjct: 831 LVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGG 890
Query: 868 HYTAYAK 874
HYTA+AK
Sbjct: 891 HYTAFAK 897
>gi|73968609|ref|XP_849935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Canis lupus familiaris]
Length = 981
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 322/907 (35%), Positives = 496/907 (54%), Gaps = 105/907 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSAPKSPGASNFSAL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKIV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN----- 675
+ ++ + ++ ++ + + + G NG P I E +
Sbjct: 598 PRNNTEDKLYNLLLLRMCRYVKISTEAEETEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 676 ---------------SHNESVETAE-------------LEDLCSRELS------FQLSLT 701
S NE+ ++ + E+ C +L+ F
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFN 717
Query: 702 DERISSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPV 747
+ + I+ D+ +HI+ + LDW D+ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDT-----RHIRFDERQLRLDERSFLALDWDPDLKKRYFDENAAEDFEK 772
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP V
Sbjct: 773 HESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPV 830
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
LV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGG
Sbjct: 831 LVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGG 890
Query: 868 HYTAYAK 874
HYTA+AK
Sbjct: 891 HYTAFAK 897
>gi|301614079|ref|XP_002936516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 933
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 326/886 (36%), Positives = 473/886 (53%), Gaps = 124/886 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LK+G+ ++LI +RW++ W++YV FD+ M V + + PGP+DNS +
Sbjct: 50 LKKGDEWYLIDSRWFKQWKKYV----------GFDAWDMYNVG-ESSLYPGPVDNSGLF- 97
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
++ D ++ +L + DYVLVP + W+KL WY +G + RK++ G+ V
Sbjct: 98 -----ADHDTQVLKEHLIDELDYVLVPTEAWKKLMNWYGSVEGQHPIVRKVVEHGLFVKN 152
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ + LKL D D + R KA T EK ++R I ++ R+W+ +
Sbjct: 153 CKVEVYLIELKLCDDSDPENVIARHFSKADTIDTIEK--EMRNIFNISADKETRLWNRY- 209
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA 271
+ L + T+ DA L Q I++E + +G
Sbjct: 210 MTNTYEQLTKKESTVQDAGLYQGQMIVIEQRNADGT------------------------ 245
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
+P + S+ + Y SY+ + + GL GL NLGNTCFM
Sbjct: 246 -----------------WPRQTLNSSGVGYTSSYSSYSYREPSSQPGLCGLSNLGNTCFM 288
Query: 332 NSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NSALQCL +TP L +YF+ D Y EIN ENPLGM GE+A+A+ +L+R++WS + VAPR
Sbjct: 289 NSALQCLSNTPPLTRYFVTDEYKKEINRENPLGMKGEIAVAYAELIRQIWSGEHSYVAPR 348
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA
Sbjct: 349 MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAA 408
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+NH RN+S+IVD+F G +KSTLVCP CSKVS+TFDPF YLTLPLP RTM V
Sbjct: 409 EAWENHLRRNNSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFF 468
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
++ P + VT+ K G DL ALS + E +++ +VYNH+ + F+ E
Sbjct: 469 VRSDPHCKPKQYRVTVPKMGVVSDLCSALSKLSEVPA-ENMVVTDVYNHRFHKIFQM-DE 526
Query: 571 LISSIKDDEHIVAYRFD-RKQGGKIKLEIV---NRWQEKSASDYLKGSERKLFGAPLVTY 626
++S I + + I Y RK + L I R+++ +++ + LFG P++
Sbjct: 527 MLSHIMERDDIFVYEVKPRKAEEWVTLPICFRERRYRQATSTGTV------LFGQPIMIS 580
Query: 627 LEEEHLSGADIDIAVSKLLSPLRR--------TYSSAKAHGGKENGF------------- 665
+ + +L+ +D+ +L ++R +YS + G NG
Sbjct: 581 VPKHNLT---LDVLYEIVLERIQRYVKNPHPESYSCSSTDSGACNGSNGIYDDEMDHQEE 637
Query: 666 ----LPEVIDELSNSHNESVETAELEDLCS------------RELSFQLSLTDERISS-C 708
E +E + +ESVE E CS R F SL + ++
Sbjct: 638 DADDQEESQEETNGQSDESVEEENSEGGCSPCNKMPKKALVCRNRLFAFSLVNSYATADV 697
Query: 709 KPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSC 768
+ LK V +DW + +L+ + H++ T + ++ ++L C
Sbjct: 698 GSMPAKGYLKLSSFATVAIDWDSESKKLFYDDQEAEAFDKHES-MTQPQKKKVTVALREC 756
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
+ F E LG D WYCP CK+H++ATKK DLW LP +LV HLKRFSY+R+ ++KLD
Sbjct: 757 IQLFTKTETLGEHDPWYCPHCKKHQRATKKFDLWSLPKILVVHLKRFSYNRFWRDKLDAV 816
Query: 829 VNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V FPI +L++S ++ YVYDL A+SNHYGG+GGGHYTAYAK
Sbjct: 817 VEFPIRDLNMSDFVCDPQAGPYVYDLVAVSNHYGGMGGGHYTAYAK 862
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 321/833 (38%), Positives = 454/833 (54%), Gaps = 62/833 (7%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDN+ ++ +G S ++ +L DYVLVP W+KL WY +G + R
Sbjct: 43 PGPIDNACLLNDGESQS------LKEHLIAQLDYVLVPSSAWQKLVSWYGCIEGQQPIVR 96
Query: 146 KMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQEK 203
K++ G+ + VEV+ L LKL +S S + S++ S L +++ KL I EK
Sbjct: 97 KVMEFGLYAKHCEVEVYPLELKLCESSSPSNVISCCFSRRDSVATLVKEIRKLFKIPAEK 156
Query: 204 -ARIWD-YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI---------SMDST 252
R+W +F+ S L TL+DA + + +L+EV+ ++G+ S ++
Sbjct: 157 DVRLWSSHFDG--SYEQLSELGVTLEDANIYHGELVLIEVKNEDGMWPQHPFLAKSSTAS 214
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+ + S + ++NG ++ G + + Y S ++A
Sbjct: 215 SRNFTTSSKPSASSYSPASATSVITNGDSSNSYGLSSSSLGRGGSGFACN-SYSSGDSAS 273
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ G L GL NLGNTCFMNSALQCL +TP L YFL D Y EIN NPLGM GE+A A
Sbjct: 274 LSQPG-LCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEA 332
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ +L++++WS ++ VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+
Sbjct: 333 YAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKK 392
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD+F G +KSTLVCP CSKVS+TFDPF
Sbjct: 393 KPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPF 452
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YLTLPLP R + VT+ A+ P+ + V + G DL +LS + E +
Sbjct: 453 CYLTLPLPLKRDRLLEVTLVPADPQRRPVQYRVVVPMMGAISDLCESLSKLSGVPA-ENM 511
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYL 611
++A+VYNH+ + F+ L + D+ V + G + ++EK+A
Sbjct: 512 VVADVYNHRFHKIFQADEGLNHIMPKDDIFVYEVCKPSEDGSEYITFSVYFREKAARQSS 571
Query: 612 KGSERKLFGAPLVTY-----LEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
S LFG PL+ L +HL G ++ + P+ YS+ G NG
Sbjct: 572 STSGTILFGQPLLISVPKHKLTVDHLYGVVLERISRYVKLPVAEEYSTPCPGRGACNGSS 631
Query: 667 PEV---IDELSNSHN--ESVETAELEDLCSRELSFQLSLTDERISSCK------------ 709
I+E+ + + E E D C E Q+ T + + CK
Sbjct: 632 SVAEGDIEEMEHQDDGQECREKLAEVDPCHSEGCMQIEPTRD-VQPCKKQHFTFSLVNLY 690
Query: 710 ------PIQKDSILKPGKHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEA 762
I + +LK + +DW D L+D ++ K ++ + +A
Sbjct: 691 GTSEINSIVEGKLLKLNAFSTLAIDWDSDTRRLLFDE---QEAQAFEKHASVLQPQKMKA 747
Query: 763 -ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSYSRY
Sbjct: 748 VVALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYW 807
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++KLDT V FPI L++S+++ G SYVYDL A+SNHYG +G GHYTAYAK
Sbjct: 808 RDKLDTVVEFPIRGLNMSEFVCDPRGSSYVYDLIAVSNHYGAMGVGHYTAYAK 860
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 328/890 (36%), Positives = 467/890 (52%), Gaps = 85/890 (9%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L+ G+ ++LI +RW++ W++YV FD+ M V PGPIDNS +
Sbjct: 28 LQRGSHWYLIDSRWFKQWKKYV----------GFDNWDMYNVGEHNL-FPGPIDNSGLFS 76
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+ + ++ +L + DYVLVP + W KL WY +G + RK++ G+ V
Sbjct: 77 DPKSQT------LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKH 130
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ L LKL ++ D + + KA T EK + KL I E+ R+W+ +
Sbjct: 131 CKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPVERETRLWNKY-MS 189
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI---------SMDSTGNDLALVPIEPS 264
+ L D T+ DA L Q +++E Q ++G S + + P +
Sbjct: 190 NTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQTVQSKSSTAPSRNFTTSPKSSA 249
Query: 265 RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE---KGGLAG 321
+++ P ++NG +T G S SYN + + GL G
Sbjct: 250 SPYSSMSTSP-VANGDSTNTS-----GVHSSSVSRGGSGFSASYNCQEPPSSHIQPGLCG 303
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +L++++W
Sbjct: 304 LGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMW 363
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
S VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY+ KD+
Sbjct: 364 SGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLLPKDA 423
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTLPLP
Sbjct: 424 NGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPL 483
Query: 501 TVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
R M V + A+ P + VT+ G DL ALS + E +++ +VYNH+
Sbjct: 484 KKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIAA-ETMVVTDVYNHR 542
Query: 561 IFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFG 620
+ F+ L + D+ V G + + ++E+ + S L+G
Sbjct: 543 FHKIFQMDEGLSHIMPRDDIFVYEVCSTSSDGSECVMLPVYFRERKSKPAGTSSGAVLYG 602
Query: 621 APLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSS--------AKAHG-------- 659
PL+ + + L+ + AV +S PL + S + + G
Sbjct: 603 QPLLVSIPKHKLTLESLYQAVCDRISRYIKQPLPDEFCSLPLEPGACSGSRGSCEGDDEE 662
Query: 660 -------GKENGFLPE--VIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP 710
GKE PE V D L +E+ + C R L F SL ++S
Sbjct: 663 EMEHQDEGKEQFSEPEGSVEDNLGGDPSEATQKKVKGQPCPRRL-FTFSL----VNSYGT 717
Query: 711 IQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
+S+ GK +K + +DW + LY + H + +K ++ +++
Sbjct: 718 ADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHMSIVQPQKKKKTSVA 777
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++K
Sbjct: 778 LRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDK 837
Query: 825 LDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDT V FP+ L++S+++ Y+YDL A+SNHYG +G GHYTAYAK
Sbjct: 838 LDTVVEFPVRALNMSEFVCDPSARPYMYDLIAVSNHYGAMGVGHYTAYAK 887
>gi|426023756|sp|F6Z5C0.2|UBP15_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
Length = 982
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 326/911 (35%), Positives = 495/911 (54%), Gaps = 113/911 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L+ G+ ++LI +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRRGDTWYLIDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+ + S ++ +L + DY+L+P + W KL WY + + RK++ +G+ V
Sbjct: 73 DTDTQS------LKEHLIDELDYILLPTEGWNKLVSWYSVVESQQPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ LKL ++ + + V R KA T + EK ++R I ++++ R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDMIEK--EMRTIFSIPDEKETRLWNKY- 183
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA 271
+ PL+ + T+ DA L Q +++E + G + + +P + S+L
Sbjct: 184 MSNTFEPLNKPESTIQDAGLYQGQMLVIEQKNQEGQWPRGSMPKSSGIP---NFSTLPKI 240
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD-------GYDSYNTAKKG---EKGGLAG 321
+LSN + ++F S M + Y +Y ++ G E+ GL G
Sbjct: 241 SPSSLSNNY-----------NNFNSRIMKNSNYCLPSYAAYKNYEYSEPGRHNEQPGLCG 289
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCFMNSA+QCL +TP L +YFL D Y DE+N +NPLGM GE+A ++ +L++++W
Sbjct: 290 LSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQMW 349
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
S + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 350 SGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDA 409
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP CSK+S+TFDPF YLTLPLP
Sbjct: 410 DGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPM 469
Query: 501 TVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
R + V + + PM + V + K G DL ALS+ + E +++ ++YNH+
Sbjct: 470 KKERALEVYLVRMDPLAKPMQYKVIVPKIGNIMDLCTALSSLSGI-APEKMVVTDIYNHR 528
Query: 561 IFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLF 619
R F L S + +DD ++ +R + + + V ++ + Y LF
Sbjct: 529 FHRIFAMDENLSSIMERDDIYVFETSINRTEDTEQVIIPVYLREKFRHTSYSHHHGSTLF 588
Query: 620 GAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA----HGGKE---NGFLPEVIDE 672
G P + + ++ + ++ ++ T + + H KE NG P I E
Sbjct: 589 GQPFLITVPRNITEDKLYNLLLLRMCRYVKATNDTEENDGSLHCNKEHTVNGNGPNGIHE 648
Query: 673 LSN--------------------SHNESVETAE-------------LEDLC--------- 690
+ S NE+ ++ + ED C
Sbjct: 649 EGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQSVTGQK 708
Query: 691 SRELSFQLS-LTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDV-HELYDPSYIK 743
R +FQ S L I+ K K + L+ + + LDW + + +D + +
Sbjct: 709 KRLFTFQFSNLGSSDITYIKDDTKYIRFDERQLRLDERSYLALDWDPKLKKKFFDENAAE 768
Query: 744 DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWM 803
D FT +K + + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW
Sbjct: 769 DFEKHESVDFTPQK--KAFMKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWS 826
Query: 804 LPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGG 863
LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S ++ + + Y+L A+SNHYGG
Sbjct: 827 LPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSTFLINPNAGPCCYNLIAVSNHYGG 886
Query: 864 LGGGHYTAYAK 874
+GGGHYTA+AK
Sbjct: 887 MGGGHYTAFAK 897
>gi|224093933|ref|XP_002186882.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Taeniopygia guttata]
Length = 981
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 329/905 (36%), Positives = 495/905 (54%), Gaps = 102/905 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCF 330
P +S + Y + + Y +Y+ ++ G E+ GL GL NLGNTCF
Sbjct: 239 PKISPSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRHNEQPGLCGLSNLGNTCF 298
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V P
Sbjct: 299 MNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTP 358
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
RAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA
Sbjct: 359 RAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVA 418
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 EEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVY 478
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 LVRMDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIF-GMD 536
Query: 570 ELISSI--KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
E +SSI +DD ++ +R + + ++ I +EK S LFG P + +
Sbjct: 537 ENLSSIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSLLFGQPFLIAV 595
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSS---------AKAHGGKENGFLPEVID------- 671
+ ++ + ++ ++ S K HG NG P I
Sbjct: 596 PRNNTEDKLYNLLLLRMCRYVKTCTESEDTEGSLHCCKDHGINGNG--PNGIHEEGSPSE 653
Query: 672 -ELSNSHNESVETAEL-------------------------EDLC---------SRELSF 696
E +ES + EL ED C R +F
Sbjct: 654 METDEQDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQPLTGHKKRLFTF 713
Query: 697 QL-SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVH 749
Q +L + I+ K + D + + + LDW ++ + Y D S +D
Sbjct: 714 QFNNLGNTDINYIKDDTRHIRFDDRQPRLDERSFLALDWDPELKKRYFDDSAAEDFEKHE 773
Query: 750 KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
+ K +++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV
Sbjct: 774 SVEY--KPSKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLV 831
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHY 869
HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHY
Sbjct: 832 VHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHY 891
Query: 870 TAYAK 874
TA+AK
Sbjct: 892 TAFAK 896
>gi|348580469|ref|XP_003476001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Cavia
porcellus]
Length = 947
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 326/902 (36%), Positives = 496/902 (54%), Gaps = 95/902 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSAPKSPGASNFSAL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSGLSGVPADK-MIVTDIYNHRFHRIFAVD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
L S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 538 ENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAV 597
Query: 628 EEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------E 672
+ ++ + ++ ++ + + G NG P I E
Sbjct: 598 PRNNTEDKLYNLLLLRMCRYVKISTETEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEME 657
Query: 673 LSNSHNESVETAEL---------ED-----------LCSRE-LSFQLSLTDERI-----S 706
+ES + EL ED LC+ E QL+ ER+ +
Sbjct: 658 TDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKERLFTFQFN 717
Query: 707 SCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPVVHKTG 752
+ + I +HI+ + LDW ++ + Y D + +D
Sbjct: 718 NLGNTDINYIKDDIRHIRFDDRQLRLDERSFLALDWDPELKKRYFDENAAEDFEKHESVE 777
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HL
Sbjct: 778 Y--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHL 835
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+
Sbjct: 836 KRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCQYNLIAVSNHYGGMGGGHYTAF 895
Query: 873 AK 874
AK
Sbjct: 896 AK 897
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 325/881 (36%), Positives = 465/881 (52%), Gaps = 79/881 (8%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+LI +RW++ W++YV FDS M V PGPIDNS + S+
Sbjct: 58 YLIDSRWFKQWKKYV----------GFDSWDMYNVGENNL-FPGPIDNSGLF------SD 100
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
+ ++ +L + DYVLVP + W KL WY +G + RK++ G+ V +VEV+
Sbjct: 101 PESQTLKEHLIDELDYVLVPTEAWNKLVNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYL 160
Query: 163 LCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
L LKL ++ D N+ SK + + +++ KL I E+ R+W+ + + L
Sbjct: 161 LELKLCENSDPNNMLSCHFSKADTIATIEKEMRKLFNIPDERETRLWNKY-MSNTYEQLS 219
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNG------ISMDSTGNDLALVPIEPSRSSLTIAGGP 274
D T+ DA L Q +++E Q ++G + S+ + + S SS +
Sbjct: 220 KPDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKSSTSRAFTTSPKSSASSYSSMSAS 279
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNT--AKKGEKGGLAGLQNLGNTCFMN 332
++NG + G +SY+ ++ + GL GL NLGNTCFMN
Sbjct: 280 PITNGDSANSS-----GVHSSGLSRGGSGFSNSYSCRESQSHTQPGLCGLGNLGNTCFMN 334
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SALQCL +T L +YFL +Y EIN +NPLGM GE+A A+ +L++++WS VAPR
Sbjct: 335 SALQCLSNTAPLTEYFLKNEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRNTQVAPRM 394
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E
Sbjct: 395 FKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDLVVAKE 454
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+NH+ RNDS+IVD F G +KSTLVCP CSK+S+TFDPF YLTLPLP RTM V +
Sbjct: 455 AWENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPLKKDRTMEVFLV 514
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
A+ P + VT+ G DL ALS + E +++ +VYNH+ + F+ L
Sbjct: 515 SADPQCRPTQYRVTVPMMGAVSDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQMDEGL 573
Query: 572 ISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
+ D+ V + + G + ++E+ S L+G PL+ + +
Sbjct: 574 NHIMTRDDIFVYEVCNVTEDGSECVTFPVYFRERKIRQTSTSSGTVLYGQPLLISVPKHK 633
Query: 632 LSGADIDIAVSKLLS-----PL-----RRTYSSAKAHGGKENGFLPEVIDELSNSHNESV 681
L+ + + + +S PL + SA +G NG +E +ES
Sbjct: 634 LTIDYLYQVICERISRYIKHPLPDDSPKPHLDSATCNGS--NGICEGEXEEEMEHQDESK 691
Query: 682 ETAELEDLCSRELSFQLSLTDE---------RISSCK-------------PIQKDSILKP 719
+ CS E S + L +E R CK +S+
Sbjct: 692 GQPAETETCSSEDSVEHELGNESHQNVPKRVRGQHCKKRLFTFSLVNSYGTTDINSLAAD 751
Query: 720 GKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFL 773
GK +K V +DW + L+ + H + +K ++ ++L C++ F
Sbjct: 752 GKLLKLNSRSTVAVDWDTETRCLHYDEQESEAYDKHSSMLQPQKKKKTTVALRDCIELFT 811
Query: 774 TEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI
Sbjct: 812 TMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPI 871
Query: 834 LNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+L +S+++ YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 872 RDLHMSEFVCDPAAGPYVYDLIAVSNHYGAMGVGHYTAYAK 912
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 330/883 (37%), Positives = 461/883 (52%), Gaps = 85/883 (9%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+LI RW++ W++YV FDS M V PGPIDNS + S+
Sbjct: 3 YLIDIRWFKQWKKYV----------GFDSWDMYNVGEHNL-FPGPIDNSGLF------SD 45
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
+ ++ +L + DYVLVP + W KL WY +G + RK+I G+ V + +VEV+
Sbjct: 46 PESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVIEHGLFVKQCKVEVYL 105
Query: 163 LCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
L LKL ++ D + SK + + +K+ KL I E+ R+W+ + + L
Sbjct: 106 LELKLCENSDPTNVFSCHFSKADTIATIEKKMRKLFNIPAERETRLWNKYTSN-TYEQLS 164
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGI-------SMDSTG--NDLALVPIEPSRSSLTIA 271
D T+ DA L Q +++E Q ++G S ST + P + +++
Sbjct: 165 KLDNTIQDAGLYQGQVLIIEPQNEDGTWPRQTVQSKSSTAPTRNFTTSPKASASPCSSVS 224
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
P ++NG +T + S Y+ + GL GL NLGNTCFM
Sbjct: 225 ASP-VANGDSTN--ISGVHSSGISRGGSGFSALYNYQEPPSSHIQPGLCGLGNLGNTCFM 281
Query: 332 NSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NSALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR
Sbjct: 282 NSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPR 341
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY+ KD+ GRPD VA
Sbjct: 342 MFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLLPKDANGRPDVVVAK 401
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V +
Sbjct: 402 EAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMDVFL 461
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
A+ P + VT+ G DL ALS + E +++ +VYNH+ + F+ E
Sbjct: 462 VPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGVAA-ENMVVTDVYNHRFHKIFQM-DE 519
Query: 571 LISSIKDDEHIVAYRF---DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYL 627
+S I + I Y I L I R E+ + S L+G PL+ +
Sbjct: 520 GLSHIMPRDDIFVYEVCSTSTDDSECITLPIYFR--ERKSRPAGTSSGVVLYGQPLLVSI 577
Query: 628 EEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENG--------------FLPE 668
+ L+ + V +S PL + S+ G NG E
Sbjct: 578 PKHKLTLESLYQTVCDRISRYIKQPLPDEFCSSPLEPGACNGSRGSCEGDDEEEMEHQDE 637
Query: 669 VIDELSNSH-----------NESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSIL 717
+ELS +E+ + C R L F SL ++S +S+
Sbjct: 638 GKEELSEPEGTAEDSQGGDPSETTQKKVKGQPCLRRL-FTFSL----VNSYGTADINSLA 692
Query: 718 KPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
GK +K + +DW + LY + H + K ++ +++L C++
Sbjct: 693 TDGKLLKLNSRSTLAIDWDTETRSLYYDEQESEAYEKHVSMVQPPKKKKTSVALRDCIEL 752
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLDT V F
Sbjct: 753 FTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEF 812
Query: 832 PILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
P+ L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 813 PVRALNMSEFVCDPSAQPYVYDLIAVSNHYGAMGVGHYTAYAK 855
>gi|440913379|gb|ELR62836.1| Ubiquitin carboxyl-terminal hydrolase 15 [Bos grunniens mutus]
Length = 983
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 326/899 (36%), Positives = 490/899 (54%), Gaps = 95/899 (10%)
Query: 43 GNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGN 102
G +L+ +RW++ W++YV D S+D M + PGPIDNS ++++G+
Sbjct: 29 GGKRYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLRDGD 77
Query: 103 GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRV 158
S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V +V
Sbjct: 78 AQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKV 131
Query: 159 EVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRST 216
EV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ + +
Sbjct: 132 EVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTF 190
Query: 217 SPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL 276
PL+ D T+ DA L Q +++E + ++G T P P S+ + P +
Sbjct: 191 EPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL--PKI 243
Query: 277 SNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCFMN 332
S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTCFMN
Sbjct: 244 SPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMN 303
Query: 333 SALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SA QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRA
Sbjct: 304 SAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRA 363
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 364 FKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEE 423
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 424 AWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLV 483
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 484 RMDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMDENL 542
Query: 572 ISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
S + +DD ++ +R + + + V ++ S Y + LFG P + +
Sbjct: 543 SSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRN 602
Query: 631 HLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSN 675
+ ++ + ++ ++ + + G NG P I E
Sbjct: 603 NTEDKLYNLLLVRMCRYVKISTDTEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDE 662
Query: 676 SHNESVETAEL---------ED-----------LCSRE-------------LSFQL-SLT 701
+ES + EL ED LC+ E +FQ +L
Sbjct: 663 PDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCRGQLTGHKKRLFTFQFNNLG 722
Query: 702 DERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTV 755
+ I+ K + D L+ + + LDW D+ + Y D + +D +
Sbjct: 723 NTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY-- 780
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRF
Sbjct: 781 KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 840
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 SYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 899
>gi|302761826|ref|XP_002964335.1| hypothetical protein SELMODRAFT_166455 [Selaginella moellendorffii]
gi|300168064|gb|EFJ34668.1| hypothetical protein SELMODRAFT_166455 [Selaginella moellendorffii]
Length = 562
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/541 (50%), Positives = 352/541 (65%), Gaps = 58/541 (10%)
Query: 331 MNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
MNSALQCLVHTP L +FL DYS EIN +N +G GELA+AFG+LLRK+WS + +PR
Sbjct: 1 MNSALQCLVHTPQLTTFFLQDYSKEINRDNMMGTKGELAVAFGELLRKVWSPKSSPYSPR 60
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
+FK KL+RFAPQFSG+NQHDSQELLA+LLDGLHEDLNR+K KPYIE+KD GRPDEEVA+
Sbjct: 61 SFKMKLSRFAPQFSGFNQHDSQELLAYLLDGLHEDLNRLKTKPYIEVKDEDGRPDEEVAD 120
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+ H+ARNDS+IVDVFQGQYKSTLVCPVCSKVS+TFDPFMYL+LPLP T TRTMTVTV
Sbjct: 121 EYWEAHRARNDSVIVDVFQGQYKSTLVCPVCSKVSVTFDPFMYLSLPLP-TNTRTMTVTV 179
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
++GS P V + + G C++L A+ +C L DE L L ++ + + E+
Sbjct: 180 ISSDGSSPPKAHAVVVPRQGKCRELAKAVGNSCGLSTDEMLQLFQLKSQHL---LEDTLG 236
Query: 571 LISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
L S+I D + +VAYR R + + E E+ F P + + E
Sbjct: 237 L-STIPDTDQLVAYRLPRLSESAQFVAFIQEQLE----------EKDRFRVPFIIPIPPE 285
Query: 631 HL-SGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDL 689
+G DI A KLLS ++ E+ D ++++D
Sbjct: 286 GFRTGEDIKCAFEKLLSQMKTD---------------SEMFD------------SDMQDR 318
Query: 690 CSRELSFQLSLTDERISSC------KPIQKDSILKPG----KHIKVLLDWTDDVHELYDP 739
S + F L TDER + KPI D L P K+ VL++W+D V E YD
Sbjct: 319 ASSDCPFSLWTTDERATKSHLIEFDKPIPSD--LYPARINTKYTYVLVEWSDRVSEFYDL 376
Query: 740 SYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKL 799
S++ LP V K T KK RQEA+SL++CL+AFL EEPLGP DMWYCP+CK+ +QA+KKL
Sbjct: 377 SFLDRLPDVCKAA-TSKKLRQEAVSLYTCLEAFLKEEPLGPHDMWYCPRCKQRQQASKKL 435
Query: 800 DLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAIS 858
DLW LP++LV HLKRFSY RY +NKL+TFVNFPI +LDL+KY+ + + + Y+L+A+S
Sbjct: 436 DLWRLPEILVVHLKRFSYVRY-QNKLETFVNFPIHDLDLTKYLAHRSVPQQHEYELYAVS 494
Query: 859 N 859
N
Sbjct: 495 N 495
>gi|417413225|gb|JAA52955.1| Putative ubiquitin carboxyl-terminal hydrolase 15, partial
[Desmodus rotundus]
Length = 951
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 325/895 (36%), Positives = 490/895 (54%), Gaps = 95/895 (10%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+L+ +RW++ W++YV D S+D M + PGPIDNS ++++G+ S
Sbjct: 1 YLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS- 48
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
++ +L + DY+L+P + W KL WY +G + RK++ +G+ V +VEV+
Sbjct: 49 -----LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYL 103
Query: 163 LCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
LKL ++ + + V R KA T EK + K+ I EK R+W+ + + PL+
Sbjct: 104 TELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLN 162
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
D T+ DA L Q +++E + ++G T P P S+ + P +S
Sbjct: 163 KPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL--PKISPSS 215
Query: 281 TTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQ 336
+ N + S + + Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+Q
Sbjct: 216 LSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQ 275
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAFK +
Sbjct: 276 CLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQ 335
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+N
Sbjct: 336 VGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWEN 395
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V + +
Sbjct: 396 HLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDP 455
Query: 516 SGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
PM + V + K G DL ALS + D+ +++ +++NH+ R F L S I
Sbjct: 456 LTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIFNHRFHRIFAMDENLSSII 514
Query: 576 KDDE-HIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
+ DE ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 515 ERDEIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTED 574
Query: 635 ADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNSHNE 679
++ + ++ ++ + + G NG P I E +E
Sbjct: 575 KLYNLLLLRMCRYVKISTETEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDE 634
Query: 680 SVETAEL---------ED-----------LCSRE-------------LSFQL-SLTDERI 705
S + EL ED LC+ E +FQ +L + I
Sbjct: 635 SSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDI 694
Query: 706 SSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTR 759
+ K + D L+ + + LDW D+ + Y D + +D + K +
Sbjct: 695 NYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPK 752
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSR
Sbjct: 753 KPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSR 812
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 813 YMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 867
>gi|449279659|gb|EMC87193.1| Ubiquitin carboxyl-terminal hydrolase 15 [Columba livia]
Length = 982
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 325/904 (35%), Positives = 489/904 (54%), Gaps = 100/904 (11%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL-TIAG 272
+ PL+ D T+ DA L Q +++E + ++G T P P S+ T+
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTLPK 240
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
+ + + S++ YD + E+ GL GL NLGNTCFMN
Sbjct: 241 ISSSLSNNYNNMNNRNVKNSNYCPPSYTAYKNYDYSEPGRHNEQPGLCGLSNLGNTCFMN 300
Query: 333 SALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRA
Sbjct: 301 SAIQCLSNTPPLTEYFLTDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRA 360
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 361 FKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEE 420
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 421 AWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLV 480
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFF---ENP 568
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F EN
Sbjct: 481 RMDPLAKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFGMDENL 539
Query: 569 AELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+ ++ +DD ++ +R + + ++ I +EK S LFG P + +
Sbjct: 540 SNIME--RDDIYVFEIPINRTEDTE-QVIIPVCLREKCRHTSYSHSGSSLFGQPFLIAVP 596
Query: 629 EEHLSGADIDIAVSKLLSPLRRTYSS---------AKAHGGKENGFLPEVID-------- 671
+ ++ + ++ ++ S K HG NG P I
Sbjct: 597 RNNTEDKLYNLLLLRMCRYVKTCTESEDTEGSLHCCKDHGINGNG--PNGIHEEGSPSEM 654
Query: 672 ELSNSHNESVETAEL-------------------------EDLC---------SRELSFQ 697
E +ES + EL ED C R +FQ
Sbjct: 655 ETDEQDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQPLTGHKKRLFTFQ 714
Query: 698 L-SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHK 750
+L + I+ K + D + + + LDW ++ + Y D S +D
Sbjct: 715 FNNLGNTDINYIKDDTRHIRFDDRQPRLDERSFLALDWDPELKKRYFDDSAAEDFEKHES 774
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV
Sbjct: 775 VEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVV 832
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
HLKRFSYSRY+++KLDT V FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYT
Sbjct: 833 HLKRFSYSRYMRDKLDTLVGFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYT 892
Query: 871 AYAK 874
A+AK
Sbjct: 893 AFAK 896
>gi|432097481|gb|ELK27673.1| Ubiquitin carboxyl-terminal hydrolase 15, partial [Myotis davidii]
Length = 951
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 323/895 (36%), Positives = 489/895 (54%), Gaps = 95/895 (10%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+L+ +RW++ W++YV D S+D M + PGPIDNS ++++G+ S
Sbjct: 1 YLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS- 48
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
++ +L + DY+L+P + W KL WY +G + RK++ +G+ V +VEV+
Sbjct: 49 -----LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYL 103
Query: 163 LCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
LKL ++ + + V R KA T EK + K+ I EK R+W+ + + PL+
Sbjct: 104 TELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEPLN 162
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
D T+ DA L Q +++E + ++G T P P S+ + P +S
Sbjct: 163 KPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL--PKISPSS 215
Query: 281 TTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQ 336
+ N + S + + Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+Q
Sbjct: 216 LSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQ 275
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAFK +
Sbjct: 276 CLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQ 335
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GR D+ VA E W+N
Sbjct: 336 VGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRADKVVAEEAWEN 395
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H RNDS+IVD+F G +KSTLVCP C K+S+TFDPF YLTLPLP RT+ V + +
Sbjct: 396 HLKRNDSIIVDIFHGLFKSTLVCPKCDKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDP 455
Query: 516 SGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
PM + V + K G DL ALS + D+ +++ ++YNH+ R F L S +
Sbjct: 456 LTKPMQYKVIVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRFHRIFTMDENLSSIM 514
Query: 576 -KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
+DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 515 ERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTED 574
Query: 635 ADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNSHNE 679
++ + ++ ++ + + G NG P I E +E
Sbjct: 575 KLYNLLLLRMCRYVKISTETEDTEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPDDE 634
Query: 680 SVETAEL---------ED-----------LCSRE-LSFQLSLTDERISSCK-----PIQK 713
S + EL ED LC+ E QL+ +R+ + +
Sbjct: 635 SSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDT 694
Query: 714 DSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTR 759
+ I +HI+ + LDW D+ + Y D + +D + K +
Sbjct: 695 NYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPK 752
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSR
Sbjct: 753 KPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSR 812
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+++KLDT V+FPI++LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 813 YMRDKLDTLVDFPIIDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 867
>gi|189230348|ref|NP_001121498.1| ubiquitin specific peptidase 15 [Xenopus (Silurana) tropicalis]
gi|183985939|gb|AAI66318.1| LOC100158604 protein [Xenopus (Silurana) tropicalis]
Length = 955
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 320/901 (35%), Positives = 483/901 (53%), Gaps = 122/901 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L+ G+ ++LI +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRRGDTWYLIDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+ + S ++ +L + DY+L+P + W KL WY + + RK++ +G+ V
Sbjct: 73 DTDTQS------LKEHLIDELDYILLPTEGWNKLVSWYSVVESQQPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ LKL ++ + + V R KA T + EK ++R I ++++ R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDMIEK--EMRTIFSIPDEKETRLWNKY- 183
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA 271
+ PL+ + T+ DA L Q +++E + G + R S+
Sbjct: 184 MSNTFEPLNKPESTIQDAGLYQGQMLVIEQKNQEG---------------QWPRGSM--- 225
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
P + N + + Y Y+ + E+ GL GL NLGNTCFM
Sbjct: 226 --PNMKNSNYCLPSYAAY-------------KNYEYSEPGRHNEQPGLCGLSNLGNTCFM 270
Query: 332 NSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NSA+QCL +TP L +YFL D Y DE+N +NPLGM GE+A ++ +L++++WS + V PR
Sbjct: 271 NSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPR 330
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
AFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA
Sbjct: 331 AFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAE 390
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+NH RNDS+IVD+F G +KSTLVCP CSK+S+TFDPF YLTLPLP R + V +
Sbjct: 391 EAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPMKKERALEVYL 450
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
+ PM + V + K G DL ALS+ + E +++ ++YNH+ R F
Sbjct: 451 VRMDPLAKPMQYKVIVPKIGNIMDLCTALSSLSGIA-PEKMVVTDIYNHRFHRIFAMDEN 509
Query: 571 LISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
L S + +DD ++ +R + + + V ++ + Y LFG P + +
Sbjct: 510 LSSIMERDDIYVFETSINRTEDTEQVIIPVYLREKFRHTSYSHHHGSTLFGQPFLITVPR 569
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKA----HGGKE---NGFLPEVIDELSN------- 675
++ + ++ ++ T + + H KE NG P I E +
Sbjct: 570 NITEDKLYNLLLLRMCRYVKATNDTEEIDGSLHCNKEHTVNGNGPNGIHEEGSPSEMETD 629
Query: 676 -------------SHNESVETAE-------------LEDLC---------SRELSFQLS- 699
S NE+ ++ + ED C R +FQ S
Sbjct: 630 EPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQSVTGQKKRLFTFQFSN 689
Query: 700 LTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDV-HELYDPSYIKDLPVVHKTGF 753
L I+ K K + L+ + + LDW + + +D + +D F
Sbjct: 690 LGSSDITYIKDDTKYIRFDERQLRLDERSYLALDWDPKLKKKFFDENAAEDFEKHESVDF 749
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
T +K + + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLK
Sbjct: 750 TPQK--KAFMKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLK 807
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
RFSYSRY+++KLDT V+FPI +LD+S ++ + + Y+L A+SNHYGG+GGGHYTA+A
Sbjct: 808 RFSYSRYMRDKLDTLVDFPISDLDMSTFLINPNAGPCCYNLIAVSNHYGGMGGGHYTAFA 867
Query: 874 K 874
K
Sbjct: 868 K 868
>gi|302768559|ref|XP_002967699.1| hypothetical protein SELMODRAFT_145115 [Selaginella moellendorffii]
gi|300164437|gb|EFJ31046.1| hypothetical protein SELMODRAFT_145115 [Selaginella moellendorffii]
Length = 564
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 274/541 (50%), Positives = 353/541 (65%), Gaps = 56/541 (10%)
Query: 331 MNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
MNSALQCLVHTP L +FL DYS EIN +N +G GELA+AFG+LLRK+WS + +PR
Sbjct: 1 MNSALQCLVHTPQLTTFFLQDYSKEINRDNMMGTKGELAVAFGELLRKVWSPKSSPYSPR 60
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
+FK KL+RFAPQFSG+NQHDSQELLA+LLDGLHEDLNR+K KPYIE+KD GRPDEEVA+
Sbjct: 61 SFKMKLSRFAPQFSGFNQHDSQELLAYLLDGLHEDLNRLKTKPYIEVKDEDGRPDEEVAD 120
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+ H+ARNDS+IVDVFQGQYKSTLVCPVCSKVS+TFDPFMYL+LPLP T TRTMTVTV
Sbjct: 121 EYWEAHRARNDSVIVDVFQGQYKSTLVCPVCSKVSVTFDPFMYLSLPLP-TNTRTMTVTV 179
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
++GS P V + + G C++L A+ +C L DE L L ++ + + E+
Sbjct: 180 ISSDGSSPPKAHAVVVPRQGKCRELAKAVGNSCGLSTDEMLQLFQLKSQHL---LEDTLG 236
Query: 571 LISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
L S+I D + +VAYR + + V QE+ L+ + F P + + E
Sbjct: 237 L-STIPDTDQLVAYRLPKLSESA---QFVAFIQEQ-----LEDGRKDRFRVPFIIPIPPE 287
Query: 631 HL-SGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDL 689
+G DI A KLLS ++ E+ D +++ D
Sbjct: 288 GFRTGEDIKRAFEKLLSQMKTD---------------SEMFD------------SDMLDR 320
Query: 690 CSRELSFQLSLTDERISSC------KPIQKDSILKPG----KHIKVLLDWTDDVHELYDP 739
S + F L TDER + KPI D L P K+ V ++W+D V E YD
Sbjct: 321 ASSDCPFSLWTTDERATKSHLIEFDKPIPSD--LYPARINTKYTYVFVEWSDRVSEFYDL 378
Query: 740 SYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKL 799
S++ LP V K T KK RQEA+SL++CL+AFL EEPLGP DMWYCP+CK+ +QA+KKL
Sbjct: 379 SFLDRLPDVCKAA-TSKKLRQEAVSLYTCLEAFLKEEPLGPHDMWYCPRCKQRQQASKKL 437
Query: 800 DLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAIS 858
DLW LP++LV HLKRFSY RY +NKL+TFVNFPI +LDL+KY+ + + + Y+L+A+S
Sbjct: 438 DLWRLPEILVVHLKRFSYVRY-QNKLETFVNFPIHDLDLTKYLAHRSVPQQHEYELYAVS 496
Query: 859 N 859
N
Sbjct: 497 N 497
>gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 1005
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 336/945 (35%), Positives = 491/945 (51%), Gaps = 117/945 (12%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP E Q Q + L++G+ +FLI +RW++ W++YV FDS M
Sbjct: 27 TPSTESQ-KQSIGTLLKTTLRKGDEWFLIDSRWFKQWKKYV----------GFDSWDMYN 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY--- 137
V + + PGP+DNS + S+ + ++ +L + DYVLVP + W KL CWY
Sbjct: 76 VG-EHSLYPGPVDNSGLF------SDHETQILKEHLIDELDYVLVPTEAWNKLVCWYGCL 128
Query: 138 KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
+G + RK++ G+ V +VEV+ L L L ++ + + R KA T EK ++
Sbjct: 129 EGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVITRHFSKADTIDTIEK--EM 186
Query: 197 RGIEQ----EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
R + + ++ R+W+ + + L+ D T+ DA L Q +++E + ++G T
Sbjct: 187 RSLFEIPTGKETRLWNKY-MSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDG-----T 240
Query: 253 GNDLALVPIEPSRSSLTIAGGPAL------------SNGHTTGYRFNQYPGSSFGSTFMD 300
A P + +S P L +NG ++ +S G+
Sbjct: 241 WPRQASHPKSSTATSRNFTTSPKLSSNSSATISSTITNGDSSNSGSTLNNSTSSGNRLGG 300
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
+ SYN + + GL GL NLGNTCFMNSALQCL + L +YFL D Y EIN E
Sbjct: 301 YNSYSSSYNYRESPSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLDDQYEAEINRE 360
Query: 360 NPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
NPLGM GE+A ++ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFL+
Sbjct: 361 NPLGMRGEIAESYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLM 420
Query: 420 DGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
DGLHEDLNRVK+KPY+ ++D+GGR DE VA E W NH+ RNDS+IVD+F G +KSTLVCP
Sbjct: 421 DGLHEDLNRVKKKPYLALQDAGGRKDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCP 480
Query: 480 VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
C+KVS+TFDPF YLTLPLP RTM V + + P + V + K G DL AL
Sbjct: 481 ECAKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRIDPQSRPTQYRVVVPKLGSVTDLCSAL 540
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY--------------- 584
S + E +++A+VYNH+ + + + ++ I + + I Y
Sbjct: 541 SRLSGIPA-ENMVVADVYNHRFHKIYRR-DDGLNQIMEKDDIFVYEVTEEDAESMNLPVY 598
Query: 585 ---RFDRKQGGKIK--------------------------LEIVNRWQEKSASDYLKGSE 615
R + GG LE + R+ +S S +G
Sbjct: 599 FRERHSKHTGGSTGTMLFGQPLLITVPRQNLAADMLYEKVLERIGRYVTRSQSSTGEGRA 658
Query: 616 RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR-----------RTYSSAKAHG---GK 661
+ + E + ++ + A S SPL ++ +G G+
Sbjct: 659 SASASSASCSQAAECSATSSNRNAAASGSGSPLSDGASCSSSNSSNHSGTSNGNGVCEGE 718
Query: 662 ENGFLPEVIDELSNSHNESVETAELED-----LCSRELS--FQLSLTDER-ISSCKPIQK 713
E +V E N +E +T++LE+ CS F S+ + ++ P+
Sbjct: 719 EEAMDQQVSPEPENGQSEEEDTSDLENGPKTKPCSSTPPKLFSFSMVNSYGTANISPLPC 778
Query: 714 D-SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAF 772
D +ILK H V +DW D +L + H++ K ++ ++L C++ F
Sbjct: 779 DGNILKLNTHSTVAIDWDSDSKKLCYDDQEAEAYEKHESMLQAPK-KKATVALRECIELF 837
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFP 832
T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V+FP
Sbjct: 838 TTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFP 897
Query: 833 ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
+ +L++S+++ YVYDL A+SNHYGG+GGGHYTAY K A
Sbjct: 898 VRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKA 942
>gi|426373275|ref|XP_004053535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Gorilla
gorilla gorilla]
Length = 898
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 310/849 (36%), Positives = 461/849 (54%), Gaps = 105/849 (12%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS ++++G+ S ++ +L + DY+L+P + W KL WY +G + R
Sbjct: 8 PGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIAR 61
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ +G+ V +VEV+ LKL ++ + + V R KA T EK + K+ I EK
Sbjct: 62 KVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEK 121
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + PL+ D T+ DA L Q +++E + ++G
Sbjct: 122 ETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG---------------- 164
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
T GP+ N + Y Y YD + E+ GL GL
Sbjct: 165 ------TWPRGPSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGL 208
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS
Sbjct: 209 SNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWS 268
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
+ V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 269 GKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAD 328
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP
Sbjct: 329 GRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMK 388
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
RT+ V + + PM + V + K G DL ALS + D+ +++ ++YNH+
Sbjct: 389 KERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADK-MIVTDIYNHRF 447
Query: 562 FRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFG 620
R F L S + +DD ++ +R + + + V ++ S Y + LFG
Sbjct: 448 HRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFG 507
Query: 621 APLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDEL 673
P + + + ++ + ++ ++ + + + G NG P I E
Sbjct: 508 QPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEE 567
Query: 674 SN--------------------SHNESVETAE-------------LEDLC--------SR 692
+ S NE+ ++ + ED C R
Sbjct: 568 GSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKR 627
Query: 693 ELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDL 745
+FQ +L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 628 LFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDF 687
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP
Sbjct: 688 EKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLP 745
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+G
Sbjct: 746 PVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMG 805
Query: 866 GGHYTAYAK 874
GGHYTA+AK
Sbjct: 806 GGHYTAFAK 814
>gi|354477262|ref|XP_003500841.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Cricetulus
griseus]
Length = 1203
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 324/895 (36%), Positives = 493/895 (55%), Gaps = 95/895 (10%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+L+ +RW++ W++YV D S+D M + PGPIDNS ++++G+ S
Sbjct: 253 YLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS- 300
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
++ +L + DY+L+P + W KL WY +G + RK++ +G+ V +VEV+
Sbjct: 301 -----LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYL 355
Query: 163 LCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
LKL ++ + + V R KA T EK + K+ I EK R+W+ + + PL+
Sbjct: 356 TELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLN 414
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
D T+ DA L Q +++E + ++G T P P S+ + P +S
Sbjct: 415 KPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSAPKSPGASNFSAL--PKISPSS 467
Query: 281 TTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQ 336
+ N + S + + Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+Q
Sbjct: 468 LSNNYNNINSRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQ 527
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAFK +
Sbjct: 528 CLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQ 587
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+N
Sbjct: 588 VGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWEN 647
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP R++ V + +
Sbjct: 648 HLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDP 707
Query: 516 SGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
PM + V + K G DL ALS + D+ +++ ++YNH+ R F L S +
Sbjct: 708 LIKPMQYKVIVPKIGNILDLCAALSALSGVPADK-MIVTDIYNHRFHRIFAMDENLSSIM 766
Query: 576 -KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
+DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 767 ERDDIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTED 826
Query: 635 ADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID--------ELSNSHNE 679
++ + ++ ++ + + + G NG P I E +E
Sbjct: 827 KLYNLLLLRMCRYVKMSTETEETDGPLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDE 886
Query: 680 SVETAEL---------ED-----------LCSRE-------------LSFQ-LSLTDERI 705
S + EL ED LC+ E +FQ ++L + I
Sbjct: 887 SSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHRKRLFTFQFINLGNTDI 946
Query: 706 SSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTR 759
+ K + D L+ + + LDW D+ + Y D + +D + K +
Sbjct: 947 NYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPK 1004
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSR
Sbjct: 1005 KPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSR 1064
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+++KLDT V+FPI +LD+S+++ + + +Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 1065 YMRDKLDTLVDFPINDLDMSEFLINPNAGPCLYNLIAVSNHYGGMGGGHYTAFAK 1119
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 319/842 (37%), Positives = 444/842 (52%), Gaps = 77/842 (9%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +G + R
Sbjct: 11 PGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVR 64
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL I E+
Sbjct: 65 KVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAER 124
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + L D T+ DA L Q +++E Q ++G T +
Sbjct: 125 ETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKS--STA 181
Query: 263 PSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
PSR+ T ++NG +T G SYN +
Sbjct: 182 PSRNFTTSPKSSASPYSSVSASLIANGDSTSTC-----GMHSSGVSRGGSGFSASYNCQE 236
Query: 313 KGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+
Sbjct: 237 PPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEI 296
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNR
Sbjct: 297 AEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNR 356
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TF
Sbjct: 357 VKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTF 416
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF YLTLPLP R M V + A+ P + VT+ G DL ALS +
Sbjct: 417 DPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIAA- 475
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E +++A+VYNH+ + F+ L + D+ V G + + ++E+ +
Sbjct: 476 ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSR 535
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKEN 663
S L+G PL+ + + L+ + AV +S PL + S+ G N
Sbjct: 536 PSSTSSASALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACN 595
Query: 664 GF---------------------LPEV----IDELSNSHNESVETAELEDLCSRELSFQL 698
G L E DE N +E+ + + + R +F L
Sbjct: 596 GSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRLFTFSL 655
Query: 699 SLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTG 752
++S +S+ GK +K + +DW + LY + H +
Sbjct: 656 ------VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSM 709
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HL
Sbjct: 710 LQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHL 769
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G GHYTAY
Sbjct: 770 KRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAY 829
Query: 873 AK 874
AK
Sbjct: 830 AK 831
>gi|11077995|gb|AAG28973.1|AF013990_1 ubiquitin C-terminal hydrolase [Homo sapiens]
Length = 902
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 310/849 (36%), Positives = 459/849 (54%), Gaps = 101/849 (11%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS ++++G+ S ++ +L + DY+L+P + W KL WY +G + R
Sbjct: 8 PGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIAR 61
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ +G+ V +VEV+ LKL ++ + + V R KA T EK + K+ I EK
Sbjct: 62 KVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEK 121
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + PL+ D T+ DA L Q +++E + E
Sbjct: 122 ETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN------------------E 162
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
T GP+ N + Y Y YD + E+ GL GL
Sbjct: 163 QKNEDGTWPRGPSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGL 212
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS
Sbjct: 213 SNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWS 272
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
+ V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 273 GKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAD 332
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP
Sbjct: 333 GRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMK 392
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
RT+ V + + PM + V + K G DL ALS + D+ +++ ++YNH+
Sbjct: 393 KERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADK-MIVTDIYNHRF 451
Query: 562 FRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFG 620
R F L S + +DD ++ +R + + + V ++ S Y + LFG
Sbjct: 452 HRIFAMDENLSSIMERDDIYVFEININRAEDTEHVIIPVCLREKFRHSSYTHHTGSSLFG 511
Query: 621 APLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDEL 673
P + + + ++ + ++ ++ + + + G NG P I E
Sbjct: 512 QPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEE 571
Query: 674 SN--------------------SHNESVETAE-------------LEDLC--------SR 692
+ S NE+ ++ + ED C R
Sbjct: 572 GSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKR 631
Query: 693 ELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDL 745
+FQ +L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 632 LFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDF 691
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP
Sbjct: 692 EKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLP 749
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+G
Sbjct: 750 PVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMG 809
Query: 866 GGHYTAYAK 874
GGHYTA+AK
Sbjct: 810 GGHYTAFAK 818
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 334/919 (36%), Positives = 461/919 (50%), Gaps = 114/919 (12%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--FGERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
W KL WY +G + RK+ S + T LS
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKV----------------------SYVDRPTCSSLSAATIE 138
Query: 187 RQLYEKVCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDN 245
+++ KL I E+ R+W+ + + L D T+ DA L Q +++E Q ++
Sbjct: 139 KEMR----KLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNED 193
Query: 246 GISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFG 295
G T + PSR+ T ++NG +T G
Sbjct: 194 GTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTST-----CGMHSS 246
Query: 296 STFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD- 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 247 GVSRGGSGFSASYNYQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDE 306
Query: 352 YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDS 411
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DS
Sbjct: 307 YEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDS 366
Query: 412 QELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQ 471
QELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 367 QELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGL 426
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 427 FKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGA 486
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG 591
DL ALS C + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 487 VSDLCEALSRLCGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYQVCSTSVD 545
Query: 592 GKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS----- 646
G + + ++E+ + S L+G PL+ + + L+ + AV +S
Sbjct: 546 GSECVTLPVYFRERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQ 605
Query: 647 PLRRTYSSAKAHGGKENGF---------------------LPEV----IDELSNSHNESV 681
PL + S+ G NG L E DEL N ++
Sbjct: 606 PLPDDFGSSPLEPGTCNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDELGNDPTKTT 665
Query: 682 ETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHE 735
+ C + L F SL ++S +S+ GK +K + +DW +
Sbjct: 666 QKKIKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRS 720
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
LY + H + +K ++ ++L C++ F T E LG D WYCP CK+H+QA
Sbjct: 721 LYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQA 780
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLF 855
TKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL
Sbjct: 781 TKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLI 840
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+SNHYG +G GHYTAYAK
Sbjct: 841 AVSNHYGAMGVGHYTAYAK 859
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 315/821 (38%), Positives = 433/821 (52%), Gaps = 74/821 (9%)
Query: 112 VRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKL 167
++ +L + DYVLVP + W KL WY +G + RK++ G+ V +VEV+ L LKL
Sbjct: 9 LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKL 68
Query: 168 IDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQT 225
++ D + + KA T EK + KL I E+ R+W+ + + L D T
Sbjct: 69 CENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNT 127
Query: 226 LDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPA 275
+ DA L Q +++E Q ++G T + PSR+ T
Sbjct: 128 VQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASP 185
Query: 276 LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMN 332
++NG +T G SYN + + GL GL NLGNTCFMN
Sbjct: 186 IANGDSTST-----CGMHSSGVSRGGSGFSASYNYQEPPSSHIQPGLCGLGNLGNTCFMN 240
Query: 333 SALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR
Sbjct: 241 SALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRM 300
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E
Sbjct: 301 FKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKE 360
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V +
Sbjct: 361 AWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLV 420
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
A+ P + VT+ G DL ALS C + E +++A+VYNH+ + F+ L
Sbjct: 421 PADPHCRPTQYRVTVPLMGAVSDLCEALSRLCGIAA-ENMVVADVYNHRFHKIFQMDEGL 479
Query: 572 ISSIKDDEHIVAYRFDRKQGGK--IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
+ D+ V G + L + R ++ S GS L+G PL+ + +
Sbjct: 480 NHIMPRDDIFVYQVCSTSVDGSECVTLPVYFRERKSRPSSTTSGS--ALYGQPLLLSVPK 537
Query: 630 EHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGFLPEVI-------------- 670
L+ + AV +S PL + S+ G NG
Sbjct: 538 HKLTLESLYQAVCDRISRYVKQPLPDDFGSSPLEPGTCNGSRNSCEGEDEEEMEHQEEGK 597
Query: 671 -----------DELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKP 719
DEL N ++ + C + L F SL ++S +S+
Sbjct: 598 EQLSETEGSGEDELGNDPTKTTQKKIKGQPCPKRL-FTFSL----VNSYGTADINSLATD 652
Query: 720 GKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFL 773
GK +K + +DW + LY + H + +K ++ ++L C++ F
Sbjct: 653 GKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFT 712
Query: 774 TEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FPI
Sbjct: 713 TMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPI 772
Query: 834 LNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 773 RGLNMSEFVCNPSARPYVYDLIAVSNHYGAMGVGHYTAYAK 813
>gi|338726451|ref|XP_001489901.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Equus
caballus]
Length = 901
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 310/849 (36%), Positives = 457/849 (53%), Gaps = 102/849 (12%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS ++++G+ S ++ +L + DY+L+P + W KL WY +G + R
Sbjct: 8 PGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIAR 61
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ +G+ V +VEV+ LKL ++ + + V R KA T EK + K+ I EK
Sbjct: 62 KVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEK 121
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + PL+ D T+ DA L Q +L + E
Sbjct: 122 ETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQ-VLFSKKY------------------E 161
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
T GP+ N + Y Y YD + E+ GL GL
Sbjct: 162 QKNEDGTWPRGPSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGL 211
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS
Sbjct: 212 SNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWS 271
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
+ V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 272 GKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAD 331
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP
Sbjct: 332 GRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMK 391
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
RT+ V + + PM + V + K G DL ALS + D+ +++ ++YNH+
Sbjct: 392 KERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALSGVPADK-MIVTDIYNHRF 450
Query: 562 FRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFG 620
R F L S + +DD ++ +R + + + V ++ S Y + LFG
Sbjct: 451 HRIFAMDENLTSIMERDDIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGSSLFG 510
Query: 621 APLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDEL 673
P + + + ++ + ++ ++ + + + G NG P I E
Sbjct: 511 QPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEE 570
Query: 674 SN--------------------SHNESVETAE-------------LEDLC--------SR 692
+ S NE+ ++ + ED C R
Sbjct: 571 GSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKR 630
Query: 693 ELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDL 745
+FQ +L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 631 LFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDF 690
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP
Sbjct: 691 EKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLP 748
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+G
Sbjct: 749 PVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMG 808
Query: 866 GGHYTAYAK 874
GGHYTA+AK
Sbjct: 809 GGHYTAFAK 817
>gi|427795287|gb|JAA63095.1| Putative ubiquitin c-terminal hydrolase posttranslational
modification, partial [Rhipicephalus pulchellus]
Length = 929
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 313/908 (34%), Positives = 473/908 (52%), Gaps = 91/908 (10%)
Query: 6 SSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE 65
SS M + GG PD E Q + + N LK+ +L++++ +W+ W+RYV
Sbjct: 3 SSSKMADGGGP----APDLETQRTE-IANLFKKALKKDDLWYMVDKKWFNQWKRYV---- 53
Query: 66 PSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLV 125
+DS + ++ PGPIDNS +++ N E+R +L E DY+L+
Sbjct: 54 ------GYDSWDTSNEIGEQTTHPGPIDNSPLLREDNSG------EIRDHLIEDLDYLLL 101
Query: 126 PQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLS 181
PQ+ W+K+ WY +G LPRK+I G+ V +VEV+ + KL + ++ Q V+R
Sbjct: 102 PQEAWDKMVAWYGLTQGQSPLPRKVIEIGLFVKNCKVEVYPMEFKLCTNSNSDQFVMRRF 161
Query: 182 KKASTRQLYEKVCK--LRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
K T EK + + +++ R+W + D S +T+ D L Q +LL
Sbjct: 162 SKVDTIAQVEKDMRTIFKVAPEKETRVWSRCSSNTYEQLSDRS-RTIQDIGLYPSQILLL 220
Query: 240 EVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFM 299
E + D+G S + P +N + ++ PG++ +
Sbjct: 221 EERNDDG-----------------SWPRQAKSSKPPYTNSRGSEHKTYGAPGNTIATRSY 263
Query: 300 DMDDGYDSYNTA------KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-Y 352
+ + + G GL GL N+GNTCFMNSALQC+ +TP L +YF+ D Y
Sbjct: 264 SAVSSSYNSYSGSCNYDLQGGNTPGLCGLGNIGNTCFMNSALQCMSNTPPLTEYFVTDRY 323
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
E+N NPLGM GE+A ++ DL++ +WS ++V PR FK + RFAPQFSG+ Q D Q
Sbjct: 324 LSELNDSNPLGMRGEIAKSYADLIKVMWSGNCSSVIPRPFKMAVGRFAPQFSGFQQQDCQ 383
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
EL+AFLLDGLHEDLNRV KPYIE+KDS GRPDE VA E W N+ RN+S+IVD+F G
Sbjct: 384 ELMAFLLDGLHEDLNRVINKPYIELKDSDGRPDEVVAQEAWHNYLLRNNSIIVDIFHGLL 443
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTLVCP C K+S+TFDPF YL+LPLP + + + + A+ P+ VT+ K
Sbjct: 444 KSTLVCPDCHKLSVTFDPFCYLSLPLPYKKEKPLELILVRADPHEKPIKVKVTVSKMSTI 503
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ-- 590
+D+ ++S + D L++ EV+NH+ R + A+ + +++ + + ++
Sbjct: 504 QDVCNSISRLMDIPADR-LVVTEVHNHRFLRVLTH-ADQVDTLERSDACDVFVYEMPHSP 561
Query: 591 -GGKIKLEIVNRWQEKS---ASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS 646
+ L + R EKS A++ LF P + + + D+ ++L+
Sbjct: 562 DNSTLFLPVYMR--EKSSQCATNSRAAPSCHLFSYPFFVSVPAKDCT---YDMLYERILN 616
Query: 647 PLRRTYSSAKAHGG--------KENGFLPEVIDELSNSHNESVETAELEDLCSRELS--- 695
L R + K ++NG L DEL +E + + + +E
Sbjct: 617 CLVRYVTPPKPGDDWCGSESMEEQNGELHNGQDELFADADEEMPSETSPEPPPKECPSKR 676
Query: 696 ---FQLSLTDERISSCKPIQKDSILKPGKHIKVL------LDWTDDVHELYDPSYIKDLP 746
F L +E S + S++ G+ +K+ DW V Y D
Sbjct: 677 RRLFTLQCINENSS----LNLASLVDNGQPLKLAPRTYLGADWLPKVRAQYFDEAKADDV 732
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
++H++ RQ + L CL+ F T E LG +D WYCP C+ H+QATKK DLW LP
Sbjct: 733 LIHESVHQRAVKRQ--LQLRECLELFTTTEKLGAEDPWYCPTCRSHKQATKKFDLWSLPR 790
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
VL+ HLKRFSY+R+ ++K+DT V+FPI +L + Y+ ++ E VYDL A++NHYGG+G
Sbjct: 791 VLIIHLKRFSYNRFWRDKIDTHVDFPITDLCMDDYIINRKHERAVYDLIAVANHYGGMGA 850
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 851 GHYTAYAK 858
>gi|443694485|gb|ELT95606.1| hypothetical protein CAPTEDRAFT_180316 [Capitella teleta]
Length = 938
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 323/884 (36%), Positives = 480/884 (54%), Gaps = 96/884 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LK+G +FL+ +W++ W++YV D + ++ + + PGPIDNS +++
Sbjct: 27 LKKGATWFLVDAKWFKQWKKYVGYDNWDV-----------SLAGEESANPGPIDNSPLME 75
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEK 156
NG+++ ++ +L + D+VLVP++ W+KL WY G PRK+I +G+ +
Sbjct: 76 -ANGTTDT----LKDHLMDELDFVLVPEEAWQKLTSWYGTVAGQEPFPRKVIEQGMFTKH 130
Query: 157 -RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ + LKL D D + +RL +A ++ + +RG+ + + R+W+ +
Sbjct: 131 CKVEVYLMDLKLCDYDDLKKIHVRLFSRADPVEVIKTT--MRGVFSIEDDVEIRLWNKY- 187
Query: 212 KQRSTSPLDVSDQ-----TLDDAMLQMDQDILLEVQVDNGI---SMDSTGNDLALVPIEP 263
+TS ++ D ++ DA L Q I++E + +G + S V
Sbjct: 188 ---TTSTFELLDDKGNGYSIQDAGLCPGQVIVVERKKSDGTWPRQVPSKNLTSFSVSSIS 244
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
S+ AGG + S+ YP S F S+ Y+S NT +G L GL
Sbjct: 245 GSSTSFGAGGSSSSSISNYESNSGSYPSSYFNSS-------YES-NTRNRG----LCGLS 292
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSA+QCL + L +Y L D + E+NT+NPLGM GE+A F +L++ +WS
Sbjct: 293 NLGNTCFMNSAIQCLSNVHHLTEYMLSDRWQGELNTDNPLGMRGEIATTFAELIKNMWSG 352
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
PR FK + RF PQFSGY Q DSQEL+AFLLDGLHEDLNR+K KPYIE+KD+
Sbjct: 353 KFTYTVPRNFKVAVGRFQPQFSGYQQQDSQELMAFLLDGLHEDLNRIKHKPYIEVKDADD 412
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD +A E W+N+ RNDS+IVD+F G KSTL+CP C+KVS+TFDPF YL+LPLP +
Sbjct: 413 RPDHVIAKEAWENYLRRNDSIIVDIFHGLLKSTLICPACNKVSVTFDPFCYLSLPLP--I 470
Query: 503 TRTMTVTVFYANGSGLP--MPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
+ + VF+ +G + VT+ K G D+ ALST + D +++ +VYNH+
Sbjct: 471 KKERQIEVFFVSGDPAKKLTQYKVTVPKLGTVNDICKALSTLTSVPADH-MMVTDVYNHR 529
Query: 561 IFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVN---RWQEKSASDYLKGSERK 617
+ F P + ++ I D + I ++ K I+ R + +S S +
Sbjct: 530 FHKIFP-PEDGLNHILDRDDIFVHQIPTKNTNDSDHTIIPVYMREKNPHSSKSYNNSSTQ 588
Query: 618 LFGAPLVTYLEEEHLSGADIDIAVSK-----LLSPLR-----RTYSSAKAHGGKENGFLP 667
LFG PL+ + +++ S + AV K + SP +T S+ + NG +
Sbjct: 589 LFGQPLLVAVPKKNCSYDMLYQAVLKKMSRYVTSPAEQDEWWKTVSNGSSEESNLNGEM- 647
Query: 668 EVIDELSNSHNESVETA------ELEDLCS----RELSFQLSLTDERISSCKPIQKDSIL 717
EV DE NS +S++ A E +D S R +F ++S + SI
Sbjct: 648 EVNDEADNSSEDSIQEASEVIQEEADDKQSSRAPRLFTFHF------VNSYGSTEMQSIR 701
Query: 718 KPGKHIK------VLLDWTDDVHEL-YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLD 770
GK +K + +DW ++ YD +D K ++ + L CLD
Sbjct: 702 DDGKMLKFPSRCYLAIDWHPKAKQMFYDEKAAEDFE--SDPSMNAKTVQKRHVQLTECLD 759
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVN 830
F T E LG D+WYCPQCK+HRQATKK D+W LP VLV HLKRFS ++Y ++KLD++V
Sbjct: 760 LFTTTEQLGEQDLWYCPQCKKHRQATKKFDVWQLPRVLVVHLKRFSCNKYWRDKLDSYVE 819
Query: 831 FPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
FP L L K++ ++ S YDL ++SNHYGG+GGGHYTAY K
Sbjct: 820 FPTRGLCLKKWLLNQCHGSATYDLISVSNHYGGMGGGHYTAYGK 863
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 314/838 (37%), Positives = 440/838 (52%), Gaps = 68/838 (8%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +G + R
Sbjct: 3 PGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLINWYGCVEGQQPIVR 56
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLRGIEQEK 203
K++ G+ V +VEV+ L LKL ++ D + SK + + +++ KL I E+
Sbjct: 57 KVVEYGLFVKHCKVEVYLLELKLCENSDPTNMRSCHFSKADTIATIEKEMRKLFNIPAER 116
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + L D T+ DA L Q +++E Q ++G T +
Sbjct: 117 ETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKS--STA 173
Query: 263 PSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
PSR+ T ++NG +T G SYN +
Sbjct: 174 PSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMHSSGVGRGGSGFSASYNCQE 228
Query: 313 KGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+
Sbjct: 229 PPSSHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEI 288
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNR
Sbjct: 289 AEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNR 348
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK+KPY+E++D+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TF
Sbjct: 349 VKKKPYLELQDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTF 408
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS +
Sbjct: 409 DPFCYLTLPLPLKKDRVMEVFLVPADPRCRPVQYRVTVPLMGAVSDLCEALSQLSGVAA- 467
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E +++ +VYNH+ + F+ L + D+ V G + + ++E+ +
Sbjct: 468 ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTCAEGSECVTLPVYFRERKSR 527
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKEN 663
S L+G PL+ + + L+ + AV + +S PL S+ G N
Sbjct: 528 PSSPSSGAVLYGQPLLVSVPKHTLTLESLYQAVCERISRYIKQPLPEEVGSSPLEPGACN 587
Query: 664 GFL-----------------------PEVI--DELSNSHNESVETAELEDLCSRELSFQL 698
G PE DEL + E+ + C + L F
Sbjct: 588 GSRGSCEGEDEEEMEHLEEGKEQLSEPEGSWEDELGSDRGETTQRKSPGRPCPQRL-FTF 646
Query: 699 SLTDER-ISSCKPIQKDS-ILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVK 756
SL + + + D +LK + +DW + LY + H + +
Sbjct: 647 SLVNAYGTADINSLTSDGKLLKLSSRSTLAIDWDTETRSLYYDEQESEAFEKHVSMLQPQ 706
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K ++ A++L C++ F T E LG D WYCP CK H+QATKK DLW LP +LV HLKRFS
Sbjct: 707 KKKKTAMALRDCIELFTTMETLGEHDPWYCPNCKRHQQATKKFDLWSLPKILVVHLKRFS 766
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G GHYTA+AK
Sbjct: 767 YSRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGAMGVGHYTAHAK 824
>gi|5669678|gb|AAD46422.1|AF105715_1 ubiquitous nuclear protein [Gallus gallus]
Length = 950
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 323/908 (35%), Positives = 473/908 (52%), Gaps = 139/908 (15%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 SSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRHNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEESEM- 452
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F E +
Sbjct: 453 -DPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIFAM-DENL 509
Query: 573 SSIKDDEHIVAYRFDRKQGGKIKLEIVNR-WQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
SSI + + I + + I+ +EK S LFG P + + +
Sbjct: 510 SSIMERDDIYVFEIAINTTEDTEQVIIPVCLREKCRHTSYSHSGSSLFGQPFLIAVPRNN 569
Query: 632 LSGADIDIAVSKLLSPLRRTYSS---------AKAHGGKENGFLPEVID--------ELS 674
++ + ++ ++ + K HG NG P I E
Sbjct: 570 TEDKLYNLLLLRMCRYVKTCTETDDSEGSLRCCKEHGINGNG--PNGIHEEGSPSEMETD 627
Query: 675 NSHNESVETAEL-------------------------EDLC---------SRELSFQLSL 700
+ES + EL ED C R +FQ +
Sbjct: 628 EQDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQPLTGHKKRLFTFQFNN 687
Query: 701 TDERISSCKPIQKDSILKPGKHIK-------------VLLDWTDDVHELY-DPSYIKDLP 746
+C I+ D+ +HI+ + LDW ++ + Y D S +D
Sbjct: 688 LGNTDINC--IKDDT-----RHIRFDDRQPKLDERSFLALDWDPELKKRYFDDSAAEDFE 740
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP
Sbjct: 741 KHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPP 798
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
VLV HLKRFSYSRY+++KLDT V FPI +LD+S G Y+L A+SNHYGG+GG
Sbjct: 799 VLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSIPYNPNAGPCR-YNLIAVSNHYGGMGG 857
Query: 867 GHYTAYAK 874
GHYTA+ K
Sbjct: 858 GHYTAFVK 865
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 315/842 (37%), Positives = 441/842 (52%), Gaps = 77/842 (9%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDN + S+ + ++ +L + DYVLVP + W KL WY +G + R
Sbjct: 11 PGPIDNPGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVR 64
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ G+ V +VEV+ L LK ++ D + + KA T EK + KL I E+
Sbjct: 65 KVVEHGLFVKHCKVEVYLLELKPCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAER 124
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + L D T+ DA L Q +++E Q ++G T +
Sbjct: 125 ETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKS--STA 181
Query: 263 PSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
P+R+ T ++NG +T G SYN +
Sbjct: 182 PNRNFTTSPKSSASPYSSVSASLIANGDSTSTC-----GMHSSGVSRGGSGFSASYNCQE 236
Query: 313 KGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
+ GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+
Sbjct: 237 PPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEI 296
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNR
Sbjct: 297 AEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNR 356
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
VK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TF
Sbjct: 357 VKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTF 416
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF YLTLPLP R M V + A+ P + VT+ G DL ALS +
Sbjct: 417 DPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIAA- 475
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSAS 608
E +++A+VYNH+ + F+ L + D+ V G + + ++E+ +
Sbjct: 476 ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSR 535
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKEN 663
S L+ PL+ + + L+ + AV +S PL + S+ G N
Sbjct: 536 PSSTSSASALYEQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACN 595
Query: 664 GF---------------------LPEV----IDELSNSHNESVETAELEDLCSRELSFQL 698
G L E DE N +E+ + + + R +F L
Sbjct: 596 GSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKIKGQPCPKRLFTFSL 655
Query: 699 SLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTG 752
++S +S+ GK +K + +DW + LY + H +
Sbjct: 656 ------VNSYGTADINSLAADGKLLKLNSRSTLAMDWDSEARRLYYDEQESEAYEKHVSM 709
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HL
Sbjct: 710 LQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHL 769
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G GHYTAY
Sbjct: 770 KRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAY 829
Query: 873 AK 874
AK
Sbjct: 830 AK 831
>gi|449531424|ref|XP_004172686.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like, partial [Cucumis sativus]
Length = 588
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 285/621 (45%), Positives = 370/621 (59%), Gaps = 62/621 (9%)
Query: 188 QLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV---D 244
+L+ + CKL +E E RIWD+ S +S + + Q DQ++LLE+QV
Sbjct: 5 ELFRRACKLFNVESELLRIWDF-------SGHTISLFSNSNKQRQSDQEVLLELQVYGLS 57
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQ--YPGSSFGSTFMDMD 302
+ I D I + S+ ++ A G + +R N + GSS
Sbjct: 58 DFIKCKEGKKDELANSILGNSSATSLMMNGASGTGSASCFRVNSSVFSGSS--------- 108
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPL 362
++ GL GLQNLGNTCFMNSALQCLVHTP L YFLGDY EIN +NPL
Sbjct: 109 ---------REAGSLGLTGLQNLGNTCFMNSALQCLVHTPKLVDYFLGDYGREINHDNPL 159
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM+GE+ALAFGD+LRKLW+ G + VAPR FK KLARFAPQFSG NQHDSQELLAFLLDGL
Sbjct: 160 GMNGEIALAFGDMLRKLWAPGASPVAPRTFKSKLARFAPQFSGCNQHDSQELLAFLLDGL 219
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E KD GR D EVA+E W+NH ARNDS+IVDV QGQYKSTLVCP+C
Sbjct: 220 HEDLNRVKKKPYVEAKDGDGRSDNEVADEYWQNHLARNDSIIVDVCQGQYKSTLVCPICK 279
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS TFDPFMYL+LPLPST RTMT+TV +GS P P+T+T+ K G +DLI ALS A
Sbjct: 280 KVSTTFDPFMYLSLPLPSTTMRTMTLTVVSTDGS-TPAPYTITVPKSGKWEDLIKALSIA 338
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
C LK DE LL+AEVYN++I R+ E PA+ +S I+D + +VAYR + + ++ L +
Sbjct: 339 CSLKADETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLAKDE-EQVPLAVF--M 395
Query: 603 QEKSASDYLKG---SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHG 659
++ Y+ G + K FG PLV L +G+DI KLLSP + + A
Sbjct: 396 HQRIEEQYINGKRTTSLKAFGFPLVAKL-PGGFNGSDIKDIYKKLLSPYQVSAPDALEEN 454
Query: 660 GKENGFLPEVIDELSNSHNES----VETAELEDLCS----RELSFQLSLTDERISSCKPI 711
+ E E+ N + + ++ +ED + + Q TD+ K I
Sbjct: 455 HTSDVDTTEKTKEVENGTSSTSACVIDPLTIEDGVNCDSPSDADLQFYTTDD-----KGI 509
Query: 712 QKDSILKPG---------KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA 762
+ S ++ G K + VL+ W + E YD + LP V K+ F K QE+
Sbjct: 510 IRGSEIEVGEFVVGSEKSKRLYVLVSWPEKQIESYDTHLLTSLPEVFKSSFA--KRPQES 567
Query: 763 ISLFSCLDAFLTEEPLGPDDM 783
+SL+ CL+AFL EEPLGP+DM
Sbjct: 568 VSLYKCLEAFLQEEPLGPEDM 588
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 328/916 (35%), Positives = 449/916 (49%), Gaps = 123/916 (13%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + + V L
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLFSG---------IVVEHGL-------------- 84
Query: 131 EKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLY 190
V +VEV+ L LKL ++ D + + KA T
Sbjct: 85 ---------------------FVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATI 123
Query: 191 EK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGIS 248
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 124 EKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTW 182
Query: 249 MDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTF 298
T + PSR+ T ++NG +T G
Sbjct: 183 PRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTST-----CGMHSSGVS 235
Query: 299 MDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSD 354
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D Y
Sbjct: 236 RGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEA 295
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQEL
Sbjct: 296 EINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQEL 355
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KS
Sbjct: 356 LAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKS 415
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
TLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G D
Sbjct: 416 TLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSD 475
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKI 594
L ALS C + E +++A+VYNH+ + F+ L + D+ V G
Sbjct: 476 LCEALSRLCGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYQVCSTSMDGSE 534
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLR 649
+ + ++E+ + S L+G PL+ + + L+ + AV +S PL
Sbjct: 535 CVTLPVYFRERKSRPSSTSSGSALYGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLP 594
Query: 650 RTYSSAKAHGGKENGFLPEVI-------------------------DELSNSHNESVETA 684
+ S+ G NG DEL N ++ +
Sbjct: 595 DDFGSSPLEPGTCNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDELGNDPTKTTQKK 654
Query: 685 ELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYD 738
C + L F SL ++S +S+ GK +K + +DW + LY
Sbjct: 655 IKGQPCPKRL-FTFSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYY 709
Query: 739 PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
+ H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK
Sbjct: 710 DEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKK 769
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAIS 858
DLW LP +LV HLKRFSY+RY ++KLDT V FPI L++S+++ + YVYDL A+S
Sbjct: 770 FDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVS 829
Query: 859 NHYGGLGGGHYTAYAK 874
NHYG +G GHYTAYAK
Sbjct: 830 NHYGAMGVGHYTAYAK 845
>gi|402886701|ref|XP_003906762.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Papio anubis]
Length = 917
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 306/837 (36%), Positives = 462/837 (55%), Gaps = 78/837 (9%)
Query: 105 SEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEV 160
++GD ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V +VEV
Sbjct: 8 ADGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEV 67
Query: 161 FXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSP 218
+ LKL ++ + + V R KA T EK + K+ I EK R+W+ + + P
Sbjct: 68 YLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MSNTFEP 126
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
L+ D T+ DA L Q +++E + ++G T P P S+ + P +S
Sbjct: 127 LNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL--PKISP 179
Query: 279 GHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSA 334
+ N + S + + Y +Y+ ++ G E+ GL GL NLGNTCFMNSA
Sbjct: 180 SSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSA 239
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAFK
Sbjct: 240 IQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFK 299
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W
Sbjct: 300 TQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAW 359
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 360 ENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRM 419
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELIS 573
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L S
Sbjct: 420 DPLTKPMQYKVVVPKIGNILDLCTALSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSS 478
Query: 574 SI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHL 632
+ +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 479 IMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNT 538
Query: 633 SGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDELSN---------- 675
++ + ++ ++ + + + G NG P I E +
Sbjct: 539 EDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEPD 598
Query: 676 ----------SHNESVETAE-------------LEDLC--------SRELSFQL-SLTDE 703
S NE+ ++ + ED C R +FQ +L +
Sbjct: 599 DESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKRLFTFQFNNLGNT 658
Query: 704 RISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKK 757
I+ K + D L+ + + LDW D+ + Y D + +D + K
Sbjct: 659 DINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHESVEY--KP 716
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSY
Sbjct: 717 PKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSY 776
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 777 SRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 833
>gi|260822380|ref|XP_002606580.1| hypothetical protein BRAFLDRAFT_131969 [Branchiostoma floridae]
gi|229291923|gb|EEN62590.1| hypothetical protein BRAFLDRAFT_131969 [Branchiostoma floridae]
Length = 911
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 322/906 (35%), Positives = 469/906 (51%), Gaps = 118/906 (13%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG P ++ Q+ DLK + LK+G+ ++L+ +W++ W++YV
Sbjct: 1 MAEGGGPPEPKV--QKSQVSSDLKKE----LKKGDTWYLVDAKWFKQWKKYV-------- 46
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
+DS M G+ + A PGPIDN+ + + D ++ +L + DY+L+P +
Sbjct: 47 --GYDSWDMYGMGDQ-ATFPGPIDNAALYKEPQTP---DCRHLKEHLIDELDYMLLPTEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W+KL WY G + RK++ G+ V +VEV+ + LKL + + V + KA
Sbjct: 101 WDKLVSWYGMVNGQQPISRKVVEHGMFVKHCKVEVYLMELKLCQNDNLDNCVSQQFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I +K R+W+ + + L+ + T+ DA L Q +++E Q
Sbjct: 161 TIDYIEKEMRKLFEIGDDKETRVWNKY-MSNTYEHLNKPENTVQDAGLYQGQILVIEQQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G R ++T + N Y S+ +
Sbjct: 220 EDGTW---------------PRGNVTNKSSSSARNMEMGTY-------SAPATRSSYSST 257
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
S + + GL GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N++NPL
Sbjct: 258 YDYSSERGRGQVQPGLCGLSNLGNTCFMNSALQCLSNVPVLTRYFLENHYQEELNSDNPL 317
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A + +L++++WS + PR FK + RFAPQFSGY Q DS ELLAFLLDGL
Sbjct: 318 GMKGEIAKTYAELIKQIWSGKYSYTIPRNFKTAVGRFAPQFSGYQQQDSHELLAFLLDGL 377
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPY+E++D+ GRPDEEVA+E WKNH+ RNDS+IVD F G +KSTLVCP CS
Sbjct: 378 HEDLNRIRKKPYVELRDADGRPDEEVADEAWKNHRLRNDSIIVDTFHGLFKSTLVCPECS 437
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+SITFDPF YL+LPLP R + V + + + PM VT
Sbjct: 438 KISITFDPFCYLSLPLPIKKERFIEVVLIRMDPAAKPMQMVVT----------------- 480
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-----DRKQGGKIKLE 597
+VYNH+ + F P E +S I D + I Y D + +
Sbjct: 481 ------------DVYNHRFHKVFA-PDEGLSHILDRDDIYVYEVPVNTCDDPDTLILPVY 527
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSSAK 656
+ R ++ S LFG PL+ + ++ + D+ I + K+ ++ S +
Sbjct: 528 MRERKVRQNPSYNYNNVSTVLFGTPLLVPIPRKNTTYEDLYRIMLQKMSRYIQEPESGDE 587
Query: 657 AHGGK-----ENGFL-------------------PEVIDELSNSHNESVETAELEDLCSR 692
+G + ++G + +V D L N ++ S + ++ R
Sbjct: 588 WYGEEIKNCVKDGVIGDDDMKNDNIDGEAESEEDSQVNDSLMNDNSMSDDEVNCDNRPHR 647
Query: 693 ELSFQL--SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHE-LYDPSYIKDLPVVH 749
+F L S I + D +K + LDW E YD ++L V
Sbjct: 648 MFTFHLVNSYGSAEIEHIR--DDDRPIKFTNRSYLALDWDPKAKEKYYDEKQAEELDVDE 705
Query: 750 KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
T + RQ ISL C+ FL +E LG DD WYCP CK+H+QATKK DLW LP +LV
Sbjct: 706 TVNATPMRKRQ-VISLKDCIQLFLVKEKLGADDPWYCPSCKKHQQATKKFDLWSLPKILV 764
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY-VYDLFAISNHYGGLGGGH 868
HLKRFSY+RY ++KLDT V FP +LD+S+++ + DG Y YDL +SNHYGG+GGGH
Sbjct: 765 IHLKRFSYNRYWRDKLDTMVEFPTRDLDMSEFIIN-DGHGYATYDLIGVSNHYGGMGGGH 823
Query: 869 YTAYAK 874
YTAY K
Sbjct: 824 YTAYGK 829
>gi|344243312|gb|EGV99415.1| Ubiquitin carboxyl-terminal hydrolase 15 [Cricetulus griseus]
Length = 870
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 304/849 (35%), Positives = 449/849 (52%), Gaps = 133/849 (15%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS ++++G+ S ++ +L + DY+L+P + W KL WY +G + R
Sbjct: 8 PGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIAR 61
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ +G+ V +VEV+ LKL ++ + + V R KA T EK + K+ I EK
Sbjct: 62 KVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEK 121
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + PL+ D T+ DA L Q +++E + ++G
Sbjct: 122 ETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG---------------- 164
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
T GP+ N + Y Y YD + E+ GL GL
Sbjct: 165 ------TWPRGPSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGL 208
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS
Sbjct: 209 SNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWS 268
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
+ V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 269 GKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDAD 328
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP
Sbjct: 329 GRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMK 388
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
R++ V + + PM VT ++YNH+
Sbjct: 389 KERSLEVYLVRMDPLIKPMQMIVT-----------------------------DIYNHRF 419
Query: 562 FRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFG 620
R F L S + +DD ++ +R + + + V ++ S Y + LFG
Sbjct: 420 HRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCLREKFRHSSYTHHTGSSLFG 479
Query: 621 APLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVID-- 671
P + + + ++ + ++ ++ + + + G NG P I
Sbjct: 480 QPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPLRCCEDQNINGNGPNGIHEE 539
Query: 672 ------ELSNSHNESVETAEL---------ED-----------LCSRE------------ 693
E +ES + EL ED LC+ E
Sbjct: 540 GSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHRKR 599
Query: 694 -LSFQ-LSLTDERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDL 745
+FQ ++L + I+ K + D L+ + + LDW D+ + Y D + +D
Sbjct: 600 LFTFQFINLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDF 659
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
+ K ++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP
Sbjct: 660 EKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLP 717
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + + +Y+L A+SNHYGG+G
Sbjct: 718 PVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCLYNLIAVSNHYGGMG 777
Query: 866 GGHYTAYAK 874
GGHYTA+AK
Sbjct: 778 GGHYTAFAK 786
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 297/783 (37%), Positives = 412/783 (52%), Gaps = 67/783 (8%)
Query: 145 RKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQE 202
RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL I E
Sbjct: 97 RKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAE 156
Query: 203 K-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPI 261
+ R+W+ + + L D T+ DA L Q +++E Q ++G T ++
Sbjct: 157 RETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSIS--ST 213
Query: 262 EPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
PSR+ T ++NG +T G SYN
Sbjct: 214 APSRNFTTSPKSSASPYSSVSASPIANGDSTSTS-----GMHSSGVSRGGSGFSASYNCQ 268
Query: 312 KKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGE 367
+ + GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN NPLGM GE
Sbjct: 269 EPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPLGMKGE 328
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLN
Sbjct: 329 IAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLN 388
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
RVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C KVS+T
Sbjct: 389 RVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECFKVSVT 448
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPF YLTLPLP R M V + A+ P + VT+ G DL ALS +
Sbjct: 449 FDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIST 508
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +++ +VYNH+ + F+ L + D+ V G + + ++E+ +
Sbjct: 509 -ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKS 567
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKE 662
S L+G PL+ + ++ L+ + AV +S PL + S+ G
Sbjct: 568 RPSSTSSGAALYGQPLLLSVPKQKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGTC 627
Query: 663 NGFLPEVI-------------------------DELSNSHNESVETAELEDLCSRELSFQ 697
+G DEL N +E+ + C + L F
Sbjct: 628 SGSRNSCEGEDEEEMEHQEEGNEQLLETEGSGEDELGNDPSETTQKKIKGQPCPKRL-FT 686
Query: 698 LSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKT 751
SL ++S +S+ GK +K + +DW + LY + H +
Sbjct: 687 FSL----VNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHVS 742
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV H
Sbjct: 743 MLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVH 802
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
LKRFSY+RY ++KLDT V FPI L++S+++ ++ YVYDL A+SNHYG +G GHYTA
Sbjct: 803 LKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPYVYDLIAVSNHYGAMGVGHYTA 862
Query: 872 YAK 874
YAK
Sbjct: 863 YAK 865
>gi|308799161|ref|XP_003074361.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
gi|116000532|emb|CAL50212.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
Length = 2214
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 311/874 (35%), Positives = 451/874 (51%), Gaps = 77/874 (8%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L G ++ W+ ++ R E S + + ++P M+ + + D +
Sbjct: 425 LTSGERVAIVPKAWFDAFSRACSAMEASAE--AMEAPMMSTIDVTS------LLGDDAMT 476
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKR-- 157
+ D +R L EG+D+ +V E WY G R + + R
Sbjct: 477 MTTSAVSEVDAALRPGLREGEDFEIVRASAMEAFERWY-GHAEGSRSIYRTCVERNGRLV 535
Query: 158 VEVFXLCL--KLIDSRDNSQTVIRLSKKASTRQLYEKVCK-----LRGIEQEKARIWDYF 210
V+V+ + + KL ++ D + L K + R+L CK LR ++++ R+ DY
Sbjct: 536 VDVYGIVVRAKLGEAPDEVTRRLELPKGSEARELV-LACKAAFEELREVDEDDIRVSDYL 594
Query: 211 NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTI 270
+ R ++ ++L+D L DQ++L+E + D+ D GN + +P S+
Sbjct: 595 FQNRGEVLTNLPKKSLEDFHLLPDQEVLVETKADDRWPDD--GNSVIALPAVSDDDSM-- 650
Query: 271 AGGPALSNGHTT-GYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTC 329
HT G + P + D+ D+ +G+ AGL NLGNTC
Sbjct: 651 --------DHTKLGCDVSLTPKN-------DVSTCADAAMVGTRGK----AGLSNLGNTC 691
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSALQCL H+ L YFL D Y +INT+NP+GM GELA + +L+ LW G V
Sbjct: 692 FMNSALQCLSHSSLLTDYFLSDKYEGDINTDNPIGMGGELAKEYANLIGALWRDGALTVT 751
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PR FK LARFAPQFSGY Q D+QELLAFLLDGLHEDLNRVK+KPY+E +D+ GR DE+V
Sbjct: 752 PRKFKHSLARFAPQFSGYMQQDAQELLAFLLDGLHEDLNRVKRKPYVEERDADGRTDEDV 811
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A+E W+ H ARNDS IVD FQGQY+STLVCP CS S+ FDPFMYL++P+PS R + V
Sbjct: 812 AHESWEAHLARNDSCIVDTFQGQYRSTLVCPSCSNKSVKFDPFMYLSIPVPSVGERVIKV 871
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILAL-STACCLKIDEGLLLAEVYNHQIFRFFEN 567
T+ + + + L K G L AL A +DE L+L EVYNH++ + N
Sbjct: 872 TLISYGDEISAVTYALKLPKLGELATLFSALCEVADVDTMDERLVLCEVYNHRLEKTLSN 931
Query: 568 PAELISSIKDDEHIVAYRF----DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPL 623
+S I++ + I A+R D + I +V R + ++ + S +PL
Sbjct: 932 MTMPLSDIRERDTIFAHRLPVLNDDEVSETIDTVLVQRKHQNASQNKTPYSH----ASPL 987
Query: 624 VTYLEEEHLSGADIDIAVSKLLSP----LRRTYSSAKAHGGK-ENGFLPEVIDELSNSHN 678
T + + V K P RR S + + K E S S +
Sbjct: 988 ATSTLVRFGFPWIVPVTVPKGKKPGAEQARRIESIVEKYSAKYARTIAMEQPSSPSASGD 1047
Query: 679 ESVETAELEDLCSRE--LSFQLSLTDERIS-------SCKPI----QKDSILKPGKHIKV 725
S ++A + + +F+L T++ S S P + I+ H V
Sbjct: 1048 GSFDSAPVHRTTNDGDLRAFKLRYTNKSASASFHDYGSGDPATDSHEMSYIVGTTMHC-V 1106
Query: 726 LLDWTDDV--HELYDPSYIKDL-PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+DW+ H D + +D+ V + +T + + L +CL+AF+ EEPLG DD
Sbjct: 1107 AIDWSPKALSHSYDDELFEQDVDEHVSVKENALDRTSMQGMPLSACLEAFIQEEPLGEDD 1166
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
MWYC QCKEH A KKLDLW +P +LV HLKRFSYSR ++K+DT V+FP+ +LD+S Y+
Sbjct: 1167 MWYCKQCKEHVPALKKLDLWRMPPILVMHLKRFSYSRIYRDKIDTLVHFPLNDLDMSPYV 1226
Query: 843 --KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ G + VYDL+A+ NH+GG+GGGHYTAY +
Sbjct: 1227 LANTSSGPAPVYDLYAVVNHFGGMGGGHYTAYTR 1260
>gi|405960113|gb|EKC26060.1| Ubiquitin carboxyl-terminal hydrolase 15 [Crassostrea gigas]
Length = 923
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 321/902 (35%), Positives = 470/902 (52%), Gaps = 126/902 (13%)
Query: 39 DLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII 98
+LK G++++L+ +W++ W++YV +D V K PGP+DNS ++
Sbjct: 19 ELKRGDIWYLVDAKWFKQWKKYV----------GYDDWDRTFVGEKDV-YPGPVDNSPLL 67
Query: 99 QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VN 154
+ G E++ +L + DY+L+P++ WEK+ Y +G + RK+I +G+ V
Sbjct: 68 KEGKE-------ELKEHLIDELDYILLPKEGWEKIVESYGITEGQTPIKRKVIEQGMFVK 120
Query: 155 EKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLR-GIEQEK-ARIWDYFNK 212
+VEV+ + +KL ++ + S++V + T + EKV + + I +K R+W+ +
Sbjct: 121 HCKVEVYLMDVKLCENSNLSESVTLSLSRCDTIEDVEKVMRKQFDISDDKEVRLWNKY-M 179
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAG 272
+ L+ +QTL +A L Q I++E + ++G P + R + T
Sbjct: 180 SNTYEHLNKPEQTLQEAGLYSGQIIVIEQKNEDGT-----------WPRQTKREADT--- 225
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG-GLAGLQNLGNTCFM 331
S +T Y N Y S Y++ K G GL GL NLGNTCFM
Sbjct: 226 ----SISYTKNY--NSYSNSD--------------YDSGKGGTVAPGLCGLSNLGNTCFM 265
Query: 332 NSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NSA+QC+ + P L Y LGD + +EIN +NPLGM GE+A ++ +L++ +WS + PR
Sbjct: 266 NSAIQCMSNVPKLTNYLLGDRWKEEINEDNPLGMGGEIARSYTELIKTMWSGKYSYTVPR 325
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
FK ++ +FAPQFSGY Q DSQELLAFLLDGLHEDLNR+K+KPY+E++DS R D+EVA
Sbjct: 326 YFKVQVGKFAPQFSGYQQQDSQELLAFLLDGLHEDLNRIKKKPYVEIQDSNNRSDQEVAK 385
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+N++ RNDS+IVD F G KST+ CP C+KVS+TFDPF YL+LP+P R + V
Sbjct: 386 ESWENYEKRNDSVIVDTFHGLLKSTVNCPECTKVSVTFDPFCYLSLPMPIKKERLLEVFW 445
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID-EGLLLAEVYNHQIFRFFENPA 569
+ P+ V + K G DL A+ L D + +++ +VYNH+ + F + +
Sbjct: 446 IPLSPEKKPIQMRVLVPKMGNIGDLCTAV--GALLSADPQKMVVTDVYNHRFHKIFLS-S 502
Query: 570 ELISSIKDDEHIVAYRFDRKQGGKIKLEIV-------NRWQEKSASDYLKGSERKLFGAP 622
E ISSI D + I Y + IV RW K +S+Y + S +LFG P
Sbjct: 503 EQISSILDRDDIFIYEVPVSTTEESSDIIVVPVYMREKRWANKCSSNY-QMSSLQLFGQP 561
Query: 623 LVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA-------KAHGGKENGFLPEVIDELSN 675
++ L + +I L + R K +E D S
Sbjct: 562 MLLALPSRMCTS---EILYRAFLQRMSRYIQVPAKDDIWWKDDEEEEQAEEDCETDNTSE 618
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDERISSCK-----PIQKDSIL---KPGK--HIKV 725
+ N +VE E+ ++ S TD C P + D I+ KP K K
Sbjct: 619 TCNGTVEKEGQENGEVLDMETSCSSTDSNSKCCNNSSTDPPESDGIVTNNKPQKTPQPKH 678
Query: 726 LLDWT-----------------DDVHELYDPSYI-KDLPVVHKTGFTVKKTRQE------ 761
L+ +T +L +YI D V K F ++KT +E
Sbjct: 679 LVKFTMVNSYGSAEMDYKIKEDGSPLKLTSRTYIAADWHPVAKEKFYLEKTAEEFEQHES 738
Query: 762 ---------AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
I L +CL+ F E LG +D+WYCPQCK+H+ ATKK DLW LPDVL+ HL
Sbjct: 739 MKVKAQKKQVIQLDNCLELFTKSEQLGENDLWYCPQCKKHQPATKKFDLWSLPDVLIVHL 798
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRFSY+R+ ++K+D V FP L+L KY+ + YDL A+SNHYGGLGGGHYTAY
Sbjct: 799 KRFSYNRFYRDKIDALVEFPARGLNLKKYIINPHHGPVTYDLIAVSNHYGGLGGGHYTAY 858
Query: 873 AK 874
AK
Sbjct: 859 AK 860
>gi|241714784|ref|XP_002413525.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
gi|215507339|gb|EEC16833.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
Length = 913
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 315/935 (33%), Positives = 463/935 (49%), Gaps = 131/935 (14%)
Query: 6 SSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE 65
SS M E G P PD E Q D+ N LK ++++L+ +W++ W++YV D
Sbjct: 8 SSTKMAEGG----PHPPDLETQ-KNDISNLLKKPLKPDDIWYLVDNKWFKQWKKYVGYDT 62
Query: 66 PSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLV 125
+ I + H PGPIDNS +++ N E + +L + DYVL+
Sbjct: 63 WDVCGIGEQTTH-----------PGPIDNSPLLKEDNSG------ETKDHLIDELDYVLL 105
Query: 126 PQQVWEKLFCWYKGGPA---LPRKMISEGI-VNEKRVEVFXLC-LKLIDSRDNSQTVIRL 180
PQ+ W+K+ WY P LPR++I G+ V + F L L S + Q + +
Sbjct: 106 PQEAWDKMVSWYGLTPGQDPLPRRVIEFGMFVKHCKAGTFSLASFYLCLSTNLEQCITKK 165
Query: 181 SKKASTRQLYEKVCK-LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
K T EK + L I +EK R+W+ ++ D + +T+ +A L Q I+
Sbjct: 166 FSKVDTIDRIEKEMRNLFSIPKEKETRLWNRYSSNTYEHLFDRT-RTVQEAGLYHGQVIM 224
Query: 239 LEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF 298
+E Q D+G SR S T + G + Y S
Sbjct: 225 IEEQNDDGSW---------------SRKSATRSYS-------AVGNNYGNYSNSC----- 257
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEIN 357
+Y G GL GL NLGNTCFMN+A+QC+ +TP L +YF+ G + E+N
Sbjct: 258 --------NYELHGGGSTPGLCGLANLGNTCFMNAAVQCMSNTPPLTEYFMEGRHLQELN 309
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR-FAPQFSGYNQHDSQELLA 416
NPLGM GE+A ++ DL+R +WS ++ PR FK R FAPQFSG+ Q D QEL+A
Sbjct: 310 HSNPLGMKGEVAKSYADLIRVMWSGNCSSTIPRPFKASGLRGFAPQFSGFQQQDCQELMA 369
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLNRV KPYIE++D GRPDE VA E W N++ RN+S+IVD+F G KSTL
Sbjct: 370 FLLDGLHEDLNRVIHKPYIELRDPDGRPDELVAQEAWHNYQLRNNSIIVDIFHGLLKSTL 429
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCP C K+S+TFDPF YL+LPLP + + + + A+ P+ VT++K +D+
Sbjct: 430 VCPDCQKLSVTFDPFCYLSLPLPIRKEKLLELVLVRADPHEKPLKMKVTVIKMSSIQDVC 489
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKL 596
++S + D LL+ EV+NH+ R +N + I ++ D + Y +
Sbjct: 490 SSVSRLVGIPADR-LLVTEVHNHRFLRVLQN-TDPIDTL-DRMEVFVYELPQSLNQDNST 546
Query: 597 EIVNRWQEKSASDYLKGSER----KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTY 652
+ + + + Y+ + +LF P + + + D+ ++L L R
Sbjct: 547 YFLPVYLREKSCRYVSNNCNVPVYQLFSQPFFVSVPAKDCT---YDMLYKRILKCLARYV 603
Query: 653 SSAKA-------------------------HGGKENGFLPEVIDELSNSHNESVETAELE 687
+ K NG P +D L+ S+ ES A+ E
Sbjct: 604 TPPKPGEEWWTEENMDKQNGGGNVGSEGGRERAAANGGCPPEVDVLNGSNEESFHDADEE 663
Query: 688 DLCSRELSFQLSLTDE-------RISSCKPIQK---------------DSI------LKP 719
RE + +E R + KP ++ DS+ LK
Sbjct: 664 CADGREEEGGSAAAEEERAPNHKRPAVDKPPRRLFSLHTINENGSLNLDSLEDGKEPLKL 723
Query: 720 GKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLG 779
G + DW V + ++ + VVH++ ++ + + L CL+ F T E LG
Sbjct: 724 GPRTYLGADWLPQVRARFFKDHVTNDMVVHES-MHQRQVAKRQLQLRECLELFTTTEKLG 782
Query: 780 PDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
+D W+CP C+ H+QATKK DLW LP VL+ HLKRFSY+R+ ++K+DT V FPI NL +
Sbjct: 783 AEDPWFCPSCRSHKQATKKFDLWSLPRVLIIHLKRFSYNRFWRDKIDTLVEFPISNLRMH 842
Query: 840 KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+ ++ VYDL A++NHYGG+GGGHYTAYAK
Sbjct: 843 DYIINQKHGPAVYDLIAVANHYGGMGGGHYTAYAK 877
>gi|391331221|ref|XP_003740048.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Metaseiulus occidentalis]
Length = 908
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 287/854 (33%), Positives = 444/854 (51%), Gaps = 93/854 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L +G+ ++L+ +W++ W++YV F+ V A PGPI+NS ++
Sbjct: 37 LAKGDHWYLLDHKWFKQWKKYV----------GFNQWETGSVGEPSA-NPGPINNSGLL- 84
Query: 100 NGNGSSEGDDLE-VRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VN 154
E D+ E +R +L + DYVL+P++ W KL WY G + R ++ G+ +
Sbjct: 85 -----IEHDNPEDLREHLIDELDYVLMPEEAWTKLVEWYGLAAGQKPIARTVVDFGMFLK 139
Query: 155 EKRVEVFXLCLKL-IDSRDNSQTVIRLSKKASTRQLYEKVC-KLRGI-EQEKARIWDYFN 211
+VE++ + LKL ++ R SK A+ ++ EKVC KL + E K R+W+ F
Sbjct: 140 NLKVEIYRMELKLCLNPNLKDAKTYRFSKVATVEEV-EKVCRKLFNVPESAKTRLWNRF- 197
Query: 212 KQRSTSPLDV---SDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
ST+ L++ ++T+ D L Q ++LEVQ +G ++ N +
Sbjct: 198 ---STNTLEIMTEKNRTIQDESLYSAQILVLEVQNPDGTWPRNSSNPPDTRKAVEQNYMV 254
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNT 328
+ A G + + +TG GL GL NLGNT
Sbjct: 255 SSAAGSKIPSYSSTG---------------------------------AGLCGLTNLGNT 281
Query: 329 CFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAV 387
CFMNSALQC+ +TP L +YFL D + +EIN +NPLGMHGE+A ++ +L++ +WS +
Sbjct: 282 CFMNSALQCMSNTPVLTEYFLSDMHVNEINRDNPLGMHGEIAESYANLIKAMWSGNHTSF 341
Query: 388 APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE 447
A + FK K+ RFAPQF+GY Q D QEL++FLLDGLHEDLNRVK+KPYIE K+S GRPD
Sbjct: 342 ALKVFKQKVGRFAPQFNGYMQQDCQELMSFLLDGLHEDLNRVKKKPYIEAKNSEGRPDHV 401
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
+A E W N+ RNDS++VD F G KSTLVCP C VS+TFDPF YL+LPLP+ R +
Sbjct: 402 LAKEAWSNYLKRNDSIVVDTFHGLLKSTLVCPECDHVSVTFDPFCYLSLPLPNRKERVVN 461
Query: 508 VTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV-YNHQIFRFFE 566
V F P+ + + C + ++ + L++A+V + + R E
Sbjct: 462 VIAFMLTNPR-PIKLRINVPPDRCTWNDFYSMIVRTLMTKHRNLVIAQVCADKTVERVIE 520
Query: 567 NPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTY 626
+ D H+ +G + + R + + K+FG P Y
Sbjct: 521 PSDDKFEETTDSLHVYETPCWPWKGAGSLVRVYTRVISNNQDSDNAFTYAKIFGVPFYVY 580
Query: 627 LEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAEL 686
+ + +D + LS L+ + S K + DE + ++ + E
Sbjct: 581 FQNRMTT---VDAIYNTCLSWLKGRFVSPKEVQAES--------DEETQMEVDTEDGKEE 629
Query: 687 EDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHE-LYD----PSY 741
++ F++++ +E ++ P ++ + + K V LD +V E +++ SY
Sbjct: 630 RPEKFKQSLFEVNIVNEMANTRMPTARNHV-RLEKRAFVTLDCLPEVKEAIFEESKCTSY 688
Query: 742 I-KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLD 800
+ +D P +++ ++ I L CLD F T E LG DD+W+CP CK+ +QATK+ +
Sbjct: 689 MSRDHPRTNRS------YTKQPIELSECLDLFTTMEQLGTDDLWFCPVCKKQQQATKRFN 742
Query: 801 LWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNH 860
LW LP +L+ HLKRFS++RY + KLD VNFP+ +L + K++ +S YDL ++NH
Sbjct: 743 LWSLPPILIIHLKRFSFNRYFREKLDVVVNFPVKDLSMGKWVLDPKHKSVPYDLIGVANH 802
Query: 861 YGGLGGGHYTAYAK 874
G LG GHYTAYAK
Sbjct: 803 TGNLGAGHYTAYAK 816
>gi|296084018|emb|CBI24406.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/547 (46%), Positives = 334/547 (61%), Gaps = 51/547 (9%)
Query: 92 IDNSDIIQN------GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPR 145
I NSD++ N S+E ++ V G+DY LVP +W + W+ +
Sbjct: 66 IFNSDLVFNLRREEDSGHSNENGEVGV-----SGRDYALVPGDLWLQALKWHTDSRVATK 120
Query: 146 KMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKAR 205
+ ++ + +V+ L L+L R+ + ++++KK + + + + CK+ +E E
Sbjct: 121 DGRTFSVMEDDMADVYPLLLRLSILRETNSLGVKITKKDNAVEFFRRACKIFSVESELLH 180
Query: 206 IWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSR 265
IWD F+ Q + ++ ++ D Q DQ+ILLE+QV G+S
Sbjct: 181 IWD-FSGQTTLFFINDKNKLPKDCQRQSDQEILLELQV-YGLS----------------- 221
Query: 266 SSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNL 325
SL G + + GSSF Y ++ + GL GLQNL
Sbjct: 222 DSLRCREG----KKDEMAAQHSNLAGSSF------------FYGSSGEAGSLGLTGLQNL 265
Query: 326 GNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
GNTCFMNS+LQCL HTP L YFLGDYS EIN EN LGM GE+ALAFGDL+RKLW+ G
Sbjct: 266 GNTCFMNSSLQCLAHTPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLWAPGAT 325
Query: 386 AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPD 445
VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPYIE KD G PD
Sbjct: 326 PVAPRMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEAKDGEGWPD 385
Query: 446 EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRT 505
EEVA+E W+NH ARNDS+IVDV QGQY+STLVCPVC KVSITFDPFMYL+LPLPST RT
Sbjct: 386 EEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSITFDPFMYLSLPLPSTTMRT 445
Query: 506 MTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFF 565
MT+TV A+G P P T+T+ K+G C+DLI ALS++C LK DE LL+AE+YN++I R+
Sbjct: 446 MTLTVVSADGITQPSPCTITVPKNGKCEDLIQALSSSCYLKDDETLLVAEIYNNRIIRYL 505
Query: 566 ENPAELISSIKDDEHIVAYRFDR-KQGGKIKLEIVNRWQEKSASDYLKG----SERKLFG 620
E+P + +S I+D + +VAYR + ++ + + R E S YL K G
Sbjct: 506 EDPTDSLSLIRDGDRLVAYRLPKVTNEDRLVVFMHQRIDECCKSGYLYNLFTQFHFKKLG 565
Query: 621 APLVTYL 627
+VTY+
Sbjct: 566 KNMVTYI 572
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 118/154 (76%), Gaps = 2/154 (1%)
Query: 721 KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGP 780
+ + +L+ W + E YD I LP + K+GF ++ QE++SL+ CL+AFL EEPLGP
Sbjct: 730 QRLNLLVFWPEKKIEQYDTHLISSLPEIFKSGFIARRP-QESVSLYRCLEAFLKEEPLGP 788
Query: 781 DDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSK 840
DDMWYCP CK HRQA+KKLDLW LP++LV HLKRFSYSR++KNKL+T+V+FP+ NLDLS
Sbjct: 789 DDMWYCPGCKTHRQASKKLDLWRLPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLST 848
Query: 841 YMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
Y+ K+G S Y L+A+SNHYG +GGGHYTA+
Sbjct: 849 YITHKNGMVSNRYMLYAVSNHYGSMGGGHYTAFV 882
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/594 (42%), Positives = 337/594 (56%), Gaps = 43/594 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GL NLGNTCFMNSALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +L+
Sbjct: 21 GLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELI 80
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++WS + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E
Sbjct: 81 KQMWSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLE 140
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTL
Sbjct: 141 LKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL 200
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R M V + A+ P + V + G DL ALS + + E +++ +V
Sbjct: 201 PLPLKKDRVMEVFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSRLSGVAV-ENMVVTDV 259
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER 616
YNH+ + F+ L + D+ V G + + ++E+ + S
Sbjct: 260 YNHRFHKIFQMDEGLNHIMPRDDIFVYEVCGTSADGSECVTLPVYFRERKSRPSSTSSGA 319
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGFLPEVI- 670
L+G PL+ + + L+ + AV + +S PL + G NG
Sbjct: 320 VLYGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLPEESGGSPLEPGACNGSRGSCEG 379
Query: 671 ------------------------DELSNSHNESVETAELEDLCSRELSFQLSLTDERIS 706
DELS H E+ + C + L F SL ++
Sbjct: 380 EDEEEMEHQEEGKEQLSETEGSGEDELSGDHGETTQKKVKGQPCPKRL-FTFSL----VN 434
Query: 707 SCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQ 760
S +S+ GK +K + +DW + LY + H + +K ++
Sbjct: 435 SYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHVSMLQPQKKKK 494
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY
Sbjct: 495 TAVALRDCIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYNRY 554
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 555 WRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGVGHYTAYAK 608
>gi|23503563|dbj|BAC20463.1| deubiquitinating enzyme [Homo sapiens]
Length = 921
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 298/900 (33%), Positives = 456/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 33 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 85
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P++ W L WY
Sbjct: 86 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPRRAWHYLVSWY 128
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 129 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 186
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 187 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 240
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 241 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 260
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 261 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 319
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 320 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 379
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 380 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 439
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 440 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 498
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 499 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 557
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 558 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 617
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 618 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 677
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 678 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 734
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 735 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 791
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 792 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 851
>gi|380798193|gb|AFE70972.1| ubiquitin carboxyl-terminal hydrolase 11, partial [Macaca mulatta]
Length = 904
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 299/900 (33%), Positives = 455/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 16 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 68
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 69 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 111
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQT-VIRLSKKASTRQLYEKV 193
G P + RK+I + N ++VEV+ + L L+ D ++ ++ S S +
Sbjct: 112 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGRSHTVQFSHTDSIGMVLRTA 169
Query: 194 CKLRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ +E QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 170 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 223
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + M + + +
Sbjct: 224 ------------------------------------WPSAQLHVMNKHMSEEDEDF---- 243
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 244 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 302
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 303 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 362
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 363 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 422
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 423 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 481
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 482 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 540
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 541 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKED 600
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 601 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 660
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 661 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKK 717
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 718 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 774
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 775 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 834
>gi|402909992|ref|XP_003917678.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Papio anubis]
Length = 963
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 299/900 (33%), Positives = 456/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQT-VIRLSKKASTRQLYEKV 193
G P + RK+I + N ++VEV+ + L L+ D ++ ++ S S +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGRSHTVQFSHTDSIGMVLRTA 228
Query: 194 CKLRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ +E QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNKNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 599
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 600 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKED 659
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 660 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 719
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 720 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 776
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 777 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 833
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 834 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 893
>gi|109130539|ref|XP_001093504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 4
[Macaca mulatta]
Length = 963
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 299/900 (33%), Positives = 455/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQT-VIRLSKKASTRQLYEKV 193
G P + RK+I + N ++VEV+ + L L+ D ++ ++ S S +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGRSHTVQFSHTDSIGMVLRTA 228
Query: 194 CKLRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ +E QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNKHMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 599
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 600 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKED 659
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 660 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 719
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 720 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKK 776
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 777 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 833
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 834 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 893
>gi|24234683|ref|NP_004642.2| ubiquitin carboxyl-terminal hydrolase 11 [Homo sapiens]
gi|251757432|sp|P51784.3|UBP11_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|187954551|gb|AAI40850.1| Ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 298/900 (33%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 599
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 600 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 659
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 660 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 719
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 720 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 776
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 777 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 833
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 834 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 893
>gi|39795322|gb|AAH63668.1| USP11 protein, partial [Homo sapiens]
Length = 923
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 298/900 (33%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 35 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 87
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 88 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 130
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 131 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 188
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 189 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 242
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 243 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 262
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 263 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 321
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 322 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 381
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 382 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 441
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 442 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 500
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 501 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 559
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 560 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 619
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 620 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 679
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 680 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 736
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 737 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 793
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 794 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 853
>gi|119579693|gb|EAW59289.1| ubiquitin specific peptidase 11, isoform CRA_b [Homo sapiens]
gi|168277940|dbj|BAG10948.1| ubiquitin carboxyl-terminal hydrolase 11 [synthetic construct]
Length = 920
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 298/900 (33%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 32 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 84
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 85 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 127
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 128 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 185
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 186 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 239
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 240 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 259
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 260 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 318
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 319 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 378
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 379 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 438
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 439 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 497
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 498 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 556
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 557 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 616
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 617 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 676
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 677 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 733
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 734 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 790
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 791 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 850
>gi|332243835|ref|XP_003271077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Nomascus
leucogenys]
Length = 963
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 298/900 (33%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 599
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 600 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 659
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 660 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 719
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 720 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 776
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 777 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 833
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 834 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 893
>gi|403297385|ref|XP_003939546.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Saimiri
boliviensis boliviensis]
Length = 923
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 299/908 (32%), Positives = 453/908 (49%), Gaps = 142/908 (15%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP ++ RQI ++ +N + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 36 LPGLDNQWRQI-ENGENGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSGTF---- 88
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + ++ + ++ L EG+DYVL+P W L WY
Sbjct: 89 -----------PGCINNAPLFEDET------NWRLKEGLVEGEDYVLLPAAAWHYLVSWY 131
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD----------NSQTVIRLSKKA 184
G P + RK+I + N ++VEV+ + L L+ D N+ +V + + A
Sbjct: 132 GLENGQPPIERKVIE--LSNIRKVEVYPVELLLVRHNDLRTSHAVQFSNTDSVGLVLRTA 189
Query: 185 STRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
R L E QE R+W N + S L + T+ D+ L+ Q I++E +
Sbjct: 190 RERFLVEP--------QEDTRLWAK-NSEGSLDRLYDTHLTVFDSALETGQLIIMETRKK 240
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G +P + + +
Sbjct: 241 DGT-----------------------------------------WPSAQLHVMNKKISED 259
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
D +G+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLG
Sbjct: 260 EDF-----RGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLG 313
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLH
Sbjct: 314 MKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLH 373
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C
Sbjct: 374 EDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGN 433
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YL++PLP + R + V + P + + K G DL +ALS
Sbjct: 434 VSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHT 493
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIV 599
+ E +++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + +
Sbjct: 494 GIS-PERMMVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVP 551
Query: 600 NRWQEKS-ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADIDIAVSKLLS----------- 646
+E++ A DY LFG PL+ + + + + + LS
Sbjct: 552 VYLRERTPARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPSSDDE 611
Query: 647 ----------------PLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLC 690
P T S + ++ G V + + + T++
Sbjct: 612 DDGDEKEDDEEDKDDVPGPSTGGSLREPESEQPGPSSGVTNRCPFLLDNCLGTSQWPPRR 671
Query: 691 SRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK 750
R+ F L + +S + + + + +DW ++ + Y + V H
Sbjct: 672 RRKQLFTLQTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHD 728
Query: 751 -TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
G+ +KK + L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+
Sbjct: 729 CVGYVMKKA---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILI 785
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLG 865
HLKRFSY+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+
Sbjct: 786 IHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESNPELYKYDLIAVSNHYGGMR 845
Query: 866 GGHYTAYA 873
GHYT +A
Sbjct: 846 DGHYTTFA 853
>gi|55728896|emb|CAH91186.1| hypothetical protein [Pongo abelii]
Length = 920
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 296/900 (32%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 32 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 84
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W + WY
Sbjct: 85 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHDMVSWY 127
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 128 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 185
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 186 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 239
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 240 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 259
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 260 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 318
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 319 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 378
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 379 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 438
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 439 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 497
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 498 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 556
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 557 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 616
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 617 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 676
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 677 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 733
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 734 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 790
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ +S Y YDL A+SNHYGG+ GHYT +A
Sbjct: 791 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNPELYKYDLIAVSNHYGGMRDGHYTTFA 850
>gi|55727816|emb|CAH90661.1| hypothetical protein [Pongo abelii]
Length = 931
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 296/900 (32%), Positives = 454/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 43 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 95
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W + WY
Sbjct: 96 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHDMVSWY 138
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 139 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 196
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 197 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 250
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 251 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 270
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 271 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 329
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 330 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 389
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 390 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 449
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 450 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 508
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 509 MVADVFSHRFYKLYQ-LEEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 567
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 568 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 627
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 628 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 687
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 688 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 744
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 745 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 801
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ +S Y YDL A+SNHYGG+ GHYT +A
Sbjct: 802 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNPELYKYDLIAVSNHYGGMRDGHYTTFA 861
>gi|355704756|gb|EHH30681.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca mulatta]
Length = 929
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 295/879 (33%), Positives = 443/879 (50%), Gaps = 133/879 (15%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQN 100
+E FL+ WY+ WE YV G + D+ +F PG I+N+ + Q+
Sbjct: 68 REPQREFLVEKHWYKQWEAYVQGGDQ--DSSTF---------------PGCINNATLFQD 110
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKR 157
+ ++ L EG+DYVL+P W L WY G P + RK+I + N ++
Sbjct: 111 E------INWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIE--LPNIQK 162
Query: 158 VEVFXLCLKLIDSRD--NSQTVIRLSKKASTRQLYEKVCKLRGI--EQEKARIWDYFNKQ 213
VEV+ + L L+ D S TV + + T + + + R + QE R+W N +
Sbjct: 163 VEVYPVELLLVRHNDLGRSHTV----QFSHTDSIVLRTARERFLVEPQEDTRLWAK-NSE 217
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
S L + T+ DA L+ Q I++E + +G
Sbjct: 218 GSLDRLYDTHITVLDAALETGQLIIMETRKKDGT-------------------------- 251
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
+P + + D+ + KG+ G + GL NLGNTCFMNS
Sbjct: 252 ---------------WPSAQLHVMMSEEDEDF-------KGQPG-ICGLTNLGNTCFMNS 288
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
ALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+++ WS ++ P F
Sbjct: 289 ALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVF 348
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ D+ GRPD+EVA E
Sbjct: 349 KNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEA 408
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP + R + V
Sbjct: 409 WQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPISHKRVLEVFFIP 468
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ P + + K G DL +ALS + E +++A+V++H+ ++ ++ E +
Sbjct: 469 MDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADVFSHRFYKLYQL-EEPL 526
Query: 573 SSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYLKGSE-RKLFGAPLVTY 626
SSI D + I Y R + +G + + + +E++ A DY LFG PL+
Sbjct: 527 SSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYNNSYYGLMLFGHPLLVS 586
Query: 627 LEEEHLSGADI-DIAVSKLLSPLRRTYSS-------------------AKAHGGKENGFL 666
+ + + + ++ + +L + + S + GG
Sbjct: 587 VPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLRDPE 646
Query: 667 PEVIDELSNSHNE-------SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKP 719
PE S N + T++ R+ F L + +S + + +
Sbjct: 647 PEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSNGTSDRTTSPEEV--- 703
Query: 720 GKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPL 778
+ +DW ++ + Y + V H G+ +KK + L C++ F T E L
Sbjct: 704 HAQPYIAIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKKA---PVRLQECIELFTTVETL 760
Query: 779 GPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL 838
++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ + KLDT V FPI +LD
Sbjct: 761 EKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDF 820
Query: 839 SKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 821 SEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 859
>gi|198423782|ref|XP_002128421.1| PREDICTED: similar to ubiquitin specific peptidase 15 [Ciona
intestinalis]
Length = 923
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 312/883 (35%), Positives = 465/883 (52%), Gaps = 96/883 (10%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
GG P + E++ +Q L NQ +LK+ L++LI RWY W++YV D +
Sbjct: 9 GGGGAPQNLEAEKKKIQSLANQ---ELKKNELWYLIDKRWYDQWKKYV-----ENDGYGW 60
Query: 74 DSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKL 133
+S + + ++ PGPIDN+DI + +++ NL E ++V++P+ WE L
Sbjct: 61 ESKNNSNLN------PGPIDNTDIFTDETYE------QMKDNLSEDVEFVMLPKTGWEYL 108
Query: 134 FCWY---KGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR--LSKKASTR 187
Y G A+ RK+I +G +K VE++ + L+L DN + V++ SK+ +
Sbjct: 109 VNTYGLVADGMAIERKVIEQGSFFKKCVVEIYPMQLRL-SPYDNRKEVVKRNFSKRNTVG 167
Query: 188 QLYEKVCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG 246
++ E+V K I +E ++W + S L+ ++++D+ LQ Q ++ E + D
Sbjct: 168 EIEEEVRKTFQIPEETPVKLWSAY-LPSSLESLE-KHKSVEDSALQPGQVVVFETKKDGK 225
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
T P SS + G A + +T G R N P ST
Sbjct: 226 WMHTPT-------PTTSYVSSNSQNG--AHKSVNTYGLR-NTSPTRGRVST--------- 266
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
GL GL NLGNTCFMNSALQCL + P L YFL + Y E+N NPLGM
Sbjct: 267 ----------AGLCGLNNLGNTCFMNSALQCLSNVPALCNYFLNETYKKELNKTNPLGMG 316
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
G+LA A+ L++ +WS +++ APR FK ++ RFAP+FSGY QHDSQELL+FL+DGLHED
Sbjct: 317 GKLAKAYARLVQSIWSGEQSSFAPREFKMEVGRFAPRFSGYQQHDSQELLSFLVDGLHED 376
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LNR+ +KPY+EMK++ GR D+ VA E W NH RNDS+IVD G ++S + CP C ++S
Sbjct: 377 LNRISKKPYVEMKEADGRDDQLVAEESWSNHHLRNDSIIVDTLHGLFRSKVDCPECPRIS 436
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
+TFDPF +++LPLP RT+ + G + VT+ K GC DL A+S +
Sbjct: 437 VTFDPFCFISLPLPLKRQRTLECSFVPLKYDGKIYKYQVTVNKTGCIXDLCKAVSELNNI 496
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEK 605
E + +VYN + + F+ P E I+ I + ++I + +K + + R
Sbjct: 497 PSTE-MTATDVYNSRFHKVFK-PNEGINGIYEKDYIHVF---QKPPNMTMVPVYMRHLSS 551
Query: 606 SASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGF 665
S + S LFG P + +DI + L +T A K++
Sbjct: 552 SGPN----SSAHLFGQPFL----------VPVDIR-NTTYRQLYKTVLKATWRYIKDDEL 596
Query: 666 LPEVIDELSNSHNESVETAELEDLC---SRELSFQLSLTDERISSCKPI--QKDSILKPG 720
+V + + + E ++ C S F L + + + + + DS L
Sbjct: 597 KSDVARLICDEEYMDDKAEEDDEDCVQPSVHRLFSLKVVNSFGTQLLRVLHETDSPLDLS 656
Query: 721 KHIKVLLDWTDDV--HELYDPSYIKDLPVVHKT--GFTVKKTRQEAISLFSCLDAFLTEE 776
++ + DW+ V H+L + D+ H++ ++K + L C+ F TEE
Sbjct: 657 ENTYITADWSYYVYEHQLMQHHW-SDVSESHESMAACNIRKA-NSGVQLHDCMRLFTTEE 714
Query: 777 PLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNL 836
L DD WYC CK+H+QATKK DLWMLP VL+ HLKRFSY+RY ++KLDT VNFP +L
Sbjct: 715 QLDKDDAWYCSDCKKHQQATKKFDLWMLPPVLIIHLKRFSYTRYSRDKLDTLVNFPTRDL 774
Query: 837 DLSKYMKSKDGESY-----VYDLFAISNHYGGLGGGHYTAYAK 874
DLS ++ + + S Y+L A+SNHYGGLGGGHYTAYAK
Sbjct: 775 DLSDFIVNPNKGSLPKPKRCYNLIAVSNHYGGLGGGHYTAYAK 817
>gi|38197496|gb|AAH00350.4| USP11 protein, partial [Homo sapiens]
Length = 921
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 297/900 (33%), Positives = 453/900 (50%), Gaps = 125/900 (13%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 33 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 85
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 86 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 128
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 129 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 186
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 187 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 240
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 241 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 260
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 261 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 319
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 320 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 379
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 380 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 439
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PL + R + V + P + + K G DL +ALS + E +
Sbjct: 440 CYLSVPLLISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 498
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 499 MVADVFSHRFYKLYQ-LEEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 557
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 558 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKED 617
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 618 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 677
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 678 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKK 734
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 735 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 791
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 792 TKFSREKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 851
>gi|148745324|gb|AAI42474.1| USP11 protein [Bos taurus]
Length = 910
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 300/902 (33%), Positives = 455/902 (50%), Gaps = 133/902 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
+P + RQI +N L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 26 VPGLESQRRQI----ENGRRRPLRVGESWFLVGHHWYKQWEVYVRGG--NQDSSTF---- 75
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+++ ++ + +++ L EG+DYVL+P W L WY
Sbjct: 76 -----------PGCINNAELFEDQV------NWRLKKGLVEGEDYVLLPAAAWHYLVNWY 118
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTR-QLYEK 192
G P + RK++ + + +VEV+ + L L+ D ++ + S+ S L+
Sbjct: 119 GLEHGQPPIERKVVE--LPSTHKVEVYSVELLLVRHSDMDTPHTAQFSQTDSVDLVLHTA 176
Query: 193 VCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ QE+ R+W N + S L + T+ DA L+ Q +++E + +G +
Sbjct: 177 REQFLVSPQEETRLW-IKNAEGSFERLCNTRVTVLDAALKTGQVVVMETRNKDGTWPSAQ 235
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+D +RS+L + ++ +
Sbjct: 236 PHD--------TRSTL-------------------------------EEEEDFQG----- 251
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 252 ---QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQA 308
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNR+K+
Sbjct: 309 YADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRIKK 368
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 369 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 428
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R M V + P + + K G DL +AL+ + E +
Sbjct: 429 CYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGIS-PERM 487
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEK 605
++A+V++H+ ++ ++ E +SSI D + I Y R G+ + L I R +
Sbjct: 488 MVADVFSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLR-ERT 545
Query: 606 SASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI--------------------------- 637
A DY LFG PL+ + + LS +
Sbjct: 546 PARDYNSSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKD 605
Query: 638 DIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQ 697
+L P R T S++ G ++ G V+ + S + R+ F
Sbjct: 606 LEDKDRLPKPGRVTAGSSQDPGLEQAGPSSRVVSRSRAPVDNSPGPSHWPQRARRKHLFT 665
Query: 698 LSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTV 755
L + +S + +D+ +P + +DW ++ + Y + V H G+ +
Sbjct: 666 LHTVNSNGTSDRSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVL 721
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
KK + L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRF
Sbjct: 722 KKA---PVQLQECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRF 778
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTA 871
SY+++ + KLDT V FPI +LD S+++ +S Y YDL A+SNHYGGL GHYT
Sbjct: 779 SYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNDSSRELYKYDLIAVSNHYGGLRDGHYTT 838
Query: 872 YA 873
+A
Sbjct: 839 FA 840
>gi|355757316|gb|EHH60841.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca fascicularis]
Length = 933
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 294/873 (33%), Positives = 441/873 (50%), Gaps = 133/873 (15%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
FL+ WY+ WE YV G + D+ +F PG I+N+ + Q+
Sbjct: 78 FLVEKHWYKQWEAYVQGGDQ--DSSTF---------------PGCINNATLFQDE----- 115
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFXL 163
+ ++ L EG+DYVL+P W L WY G P + RK+I + N ++VEV+ +
Sbjct: 116 -INWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIE--LPNIQKVEVYPV 172
Query: 164 CLKLIDSRD--NSQTVIRLSKKASTRQLYEKVCKLRGI--EQEKARIWDYFNKQRSTSPL 219
L L+ D S TV + + T + + + R + QE R+W N + S L
Sbjct: 173 ELLLVRHNDLGRSHTV----QFSHTDSIVLRTARERFLVEPQEDTRLWAK-NSEGSLDRL 227
Query: 220 DVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNG 279
+ T+ DA L+ Q I++E + +G
Sbjct: 228 YDTHITVLDAALETGQLIIMETRKKDGT-------------------------------- 255
Query: 280 HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLV 339
+P + + D+ + KG+ G + GL NLGNTCFMNSALQCL
Sbjct: 256 ---------WPSAQLHVMMSEEDEDF-------KGQPG-ICGLTNLGNTCFMNSALQCLS 298
Query: 340 HTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR 398
+ P L +YFL + Y +E+N NPLGM GE+A A+ DL+++ WS ++ P FK K+
Sbjct: 299 NVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGH 358
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKA 458
FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ D+ GRPD+EVA E W+NHK
Sbjct: 359 FASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKR 418
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP + R + V +
Sbjct: 419 RNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRRK 478
Query: 519 PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDD 578
P + + K G DL +ALS + E +++A+V++H+ ++ ++ E +SSI D
Sbjct: 479 PEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADVFSHRFYKLYQL-EEPLSSILDR 536
Query: 579 EHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYLKGSE-RKLFGAPLVTYLEEEHL 632
+ I Y R + +G + + + +E++ A DY LFG PL+ + +
Sbjct: 537 DDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYNNSYYGLMLFGHPLLVSVPRDRF 596
Query: 633 SGADI-DIAVSKLLSPLRRTYSS-------------------AKAHGGKENGFLPEVIDE 672
+ + ++ + +L + + S + GG PE
Sbjct: 597 TWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLRDPEPEQAGP 656
Query: 673 LSNSHNE-------SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKV 725
S N + T++ R+ F L + +S + + + +
Sbjct: 657 SSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSNGTSDRTTSPEEV---HAQPYI 713
Query: 726 LLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+DW ++ + Y + V H G+ +KK + L C++ F T E L ++ W
Sbjct: 714 AIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKKA---PVRLQECIELFTTVETLEKENPW 770
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 771 YCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQ 830
Query: 845 KDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 831 PQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 863
>gi|410988427|ref|XP_004000487.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Felis catus]
Length = 951
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 300/891 (33%), Positives = 439/891 (49%), Gaps = 129/891 (14%)
Query: 29 VQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER 88
+++ ++ D L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 74 IENKESGRDRPLRAGESWFLVEQHWYKQWEVYVQGGDK--DSTAF--------------- 116
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PG I+N+D+ ++ + ++R L E +DYVL+P W L WY G P + R
Sbjct: 117 PGCINNADLFEDQV------NWRLKRGLVESEDYVLLPAAAWHCLVDWYGLEHGQPPIER 170
Query: 146 KMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI--EQEK 203
K++ ++ ++VEV+ + L L+ D + L + + + + QE+
Sbjct: 171 KVVE--LLGIQKVEVYPVELLLVRHSDMDTPYTAQFSHTDSVDLVLRTAREQFLVNPQEE 228
Query: 204 ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEP 263
R+W N + S L + TL +A LQ Q I++E + +G
Sbjct: 229 TRLW-IKNAEGSFERLCNTRVTLLEAALQTGQLIIMETRNKDG----------------- 270
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
+ A A+S F PG + GL
Sbjct: 271 ---TWPSAQQQAVSTASEEDEEFQGQPG---------------------------ICGLT 300
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSALQCL + P L YFL + Y +E+N NPLGM GE+A A+ DL+++ WS
Sbjct: 301 NLGNTCFMNSALQCLSNVPQLTDYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQAWSG 360
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ D+ G
Sbjct: 361 HHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAG 420
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP +
Sbjct: 421 RPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSH 480
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
R M V + P + + K G DL +AL+ + E +++A+V++H+ +
Sbjct: 481 KRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVS-PERMMVADVFSHRFY 539
Query: 563 RFFENPAELISSIKDDEHIVAYRFDRKQG------GKIKLEIVNRWQEKSASDYLKGSE- 615
+ ++ E +SSI D + I Y + + L I R + A DY
Sbjct: 540 KIYQL-EESLSSILDRDDIFIYEVSGRSAIGDNSREDVVLPIYLR-ERTPARDYNNSYYG 597
Query: 616 RKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYSS-------------------A 655
LFG PL+ + + LS A I + +L + R S
Sbjct: 598 LMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDMEDKDSIPKPG 657
Query: 656 KAHGGKENGFLPEVIDELSNSH-------NESVETAELEDLCSRELSFQLSLTDERISSC 708
+ GG PE S + S + R+ F L + +S
Sbjct: 658 RVAGGSSQDSGPEQAGPSSGVAGGSRAPVDNSPGPSHWPQRARRKHLFTLQTVNSNGTSD 717
Query: 709 KP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLF 766
+ +D+ +P + +DW ++ + Y + V H G+ +KK + L
Sbjct: 718 RSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVRLQ 770
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++ + KLD
Sbjct: 771 ECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLD 830
Query: 827 TFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
T V FPI +LD S+++ ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 831 TLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 881
>gi|351699503|gb|EHB02422.1| Ubiquitin carboxyl-terminal hydrolase 11, partial [Heterocephalus
glaber]
Length = 911
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 305/905 (33%), Positives = 449/905 (49%), Gaps = 133/905 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
+P D+ QI ++ ++ + L+ G +FL+ RWY+ WE YV G + D +F
Sbjct: 22 MPGLEDQWNQI-ENGESGRERPLRAGESWFLVEQRWYKQWEVYVQGGDQ--DASTF---- 74
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+++ + E + ++ L EG+DYVL+P W L WY
Sbjct: 75 -----------PGCINNAELFE------EQINWCLKEGLMEGKDYVLLPAAAWHYLVSWY 117
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + + +VEV+ + L L+ D + A + L
Sbjct: 118 GLEHGQPPIERKVIE--LYSIPKVEVYPVKLLLVQHGDTETVLTAQFSLADSVDLLLHTV 175
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ + + +E AR+W N + L + TL DA L+ Q +++E++ +G S ST
Sbjct: 176 REQFLVDAEEDARLW-VKNSEGCLDRLCNTHVTLLDAALETGQLVIMEIRNKDG-SWPST 233
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
L + +SN F PG
Sbjct: 234 --------------QLCV-----MSNMAEEDEDFQGQPG--------------------- 253
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ GL NLGNTCFMNS LQCL P L +YFL + Y +E+N NPLGM GELA A
Sbjct: 254 ------ICGLTNLGNTCFMNSTLQCLSSVPQLTEYFLDNRYLEELNFCNPLGMKGELAEA 307
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS +V P FK K++ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 308 YADLVKQTWSGCHRSVVPNVFKNKVSHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 367
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 368 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 427
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP R + V + P V + K G DL +ALS + D+ +
Sbjct: 428 CYLSVPLPVCHKRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCMALSKHTGVLPDK-M 486
Query: 552 LLAEVYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEK 605
++A+V++H+ ++ + E+P +S I D + I Y R + +G K + + +E+
Sbjct: 487 IVADVFSHRFYKLYQLEDP---LSDILDRDDIFVYEVSGRIEPIEGSKDDIVVPVYLRER 543
Query: 606 S-ASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENG 664
+ A DY LFG PL+ + ++ LS + + LS +S + G+E G
Sbjct: 544 TPAQDYNSYYGLMLFGHPLLVSVPQDRLSWEGLYNILMYRLSRYVTKPTSDEEDVGEEKG 603
Query: 665 F-------------LPEVIDELSNSHNESV------------------ETAELEDLCSRE 693
P + +S E T+ R+
Sbjct: 604 EDGNSDEEEKDQMPGPSTVGNFRDSEREQAGPSSGTTGRCPFFLDNCFRTSHWPPERRRK 663
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TG 752
F L D +S + + + + +DW ++ Y + V H+
Sbjct: 664 QLFTLQAVDSNGTSDRTTSPEEV---DTQPYIAMDWEPEMKRRYYDEAEAEGYVKHECVD 720
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
+ +KK + L C++ F T E L ++ WYC CK+H+ ATKKLDLWMLP++L+ HL
Sbjct: 721 YVLKKV---PVQLQECIELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHL 777
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGH 868
KRFS+S++ KLDT V+FPI +LD S ++ ES Y YDL A+SNHYGG+ GH
Sbjct: 778 KRFSFSKFSHEKLDTLVHFPIRDLDFSDFVIKPQNESAPELYKYDLIAVSNHYGGIRDGH 837
Query: 869 YTAYA 873
YT +A
Sbjct: 838 YTTFA 842
>gi|395854375|ref|XP_003799671.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Otolemur
garnettii]
Length = 915
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/900 (32%), Positives = 452/900 (50%), Gaps = 134/900 (14%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
D + + +++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 31 DSQLRQIENGESGRERPLRAGESWFLVDQHWYKQWEVYVQGGDQ--DSSTF--------- 79
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
PG I+N+++ ++ ++ LEEG+DYVL+P W L WY G
Sbjct: 80 ------PGYINNAELFEDQIS------WRLKEGLEEGKDYVLLPAIAWHYLVSWYGLEHG 127
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P + RK+I + + VEV+ + L L+ D + L + + + +
Sbjct: 128 QPPIERKVIE--LPSTLMVEVYPVELLLVQHSDMDTAHTAQFSHTDSLDLVLRTAREQFL 185
Query: 200 --EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA 257
QE+ R+W N + S L + T+ +A L+ Q +++E + +G
Sbjct: 186 VDPQEETRLW-IKNSEGSLDRLCDTHVTVLEAALETGQLVVMETRNKDGT---------- 234
Query: 258 LVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG 317
+P + + M++ + KG+ G
Sbjct: 235 -------------------------------WPSAQLHA----MNNNVSEEDEDFKGQPG 259
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 260 -ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGEIAEAYADLV 318
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 319 KQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 378
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 379 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 438
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R + V + P + + K G DL +ALS + E +++A+V
Sbjct: 439 PLPVSHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADV 497
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYL 611
++H+ ++ ++ E +S I D + I Y R + +G + + + +E++ A DY
Sbjct: 498 FSHRFYKLYQL-EESLSGILDRDDIFVYEVSGRLEPLEGSREDIVVPVYLRERTPARDYN 556
Query: 612 KGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS--------------- 654
LFG PL+ + + + + +I + +L + + S
Sbjct: 557 NSYYGLMLFGHPLLVSVPRDRFTWEGLYNILMYRLSRYVTKPSSDDEDDVDEKDDDEEDK 616
Query: 655 ----AKAHGGKENGFLPE-------VIDELSNSHNESVETAELEDLCSRELSFQLSL--- 700
+ GG PE V + + T++ R+ F L
Sbjct: 617 DNIPGPSTGGSLRDPEPEQPGPSSGVTRRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNS 676
Query: 701 --TDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
T +R +S + +Q + +DW ++ + Y + V H+ G+ +KK
Sbjct: 677 NGTSDRTTSPEEVQTQPY--------IAIDWEPEMKKRYYDEAEAEGYVKHECVGYVLKK 728
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 729 A---PVQLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 785
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 786 TKFSREKLDTLVQFPIRDLDFSEFVLKPQNESAPELYKYDLIAVSNHYGGMRDGHYTTFA 845
>gi|296235360|ref|XP_002807922.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Callithrix jacchus]
Length = 927
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 300/908 (33%), Positives = 451/908 (49%), Gaps = 141/908 (15%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP ++ RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 39 LPGLDNQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSGTF---- 91
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + ++ + ++ L EG+DYVL+P W L WY
Sbjct: 92 -----------PGCINNAVLFEDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 134
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD----------NSQTVIRLSKKA 184
G P + RK+I + N ++VEV+ + L L+ D N+ +V + + A
Sbjct: 135 GLEDGQPPIERKVIE--LSNIRKVEVYPVELLLVRHNDLRTSHAVQFSNTDSVGLVLRTA 192
Query: 185 STRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
R L E QE R+W N + S L + T+ D+ L+ Q I+
Sbjct: 193 RERFLVEP--------QEDTRLWAK-NSEGSLDRLYDTHLTVFDSALETGQLII------ 237
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
M++ D G+ + M+
Sbjct: 238 ----METRKKD-----------------------------------GTWPSAQLHVMNKK 258
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
+ +G+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLG
Sbjct: 259 ISEEDEDFRGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLG 317
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLH
Sbjct: 318 MKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLH 377
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C
Sbjct: 378 EDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGN 437
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YL++PLP + R + V + P + + K G DL +ALS
Sbjct: 438 VSVTFDPFCYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHT 497
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIV 599
+ E +++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + +
Sbjct: 498 GIS-PERMMVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVP 555
Query: 600 NRWQEKS-ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSS--- 654
+E++ A DY LFG PL+ + + + + + LS SS
Sbjct: 556 VYLRERTPARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPSSDDE 615
Query: 655 -----------------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLC 690
+ GG PE S N + T++
Sbjct: 616 DDGDEKEDDEEDKDDVPGPSTGGSLREPEPEQPGPSSGVTNRCPFLLDNCLGTSQWPPRR 675
Query: 691 SRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK 750
R+ F L + +S + + + + +DW ++ + Y + V H
Sbjct: 676 RRKQLFTLQTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEAEAEGYVKHD 732
Query: 751 -TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
G+ +KK + L C++ F T E L ++ W+CP CK+H+ ATKKLDLWMLP++L+
Sbjct: 733 CVGYVMKKA---PVRLQECIELFTTVETLEKENPWFCPSCKQHQLATKKLDLWMLPEILI 789
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLG 865
HLKRFSY+++ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+
Sbjct: 790 IHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNESNPELYKYDLIAVSNHYGGMR 849
Query: 866 GGHYTAYA 873
GHYT +A
Sbjct: 850 DGHYTTFA 857
>gi|149066661|gb|EDM16534.1| ubiquitin specific peptidase 15, isoform CRA_c [Rattus norvegicus]
Length = 654
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/622 (39%), Positives = 356/622 (57%), Gaps = 60/622 (9%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 23 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 82
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 83 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 142
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 143 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 202
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 203 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 262
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 263 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPVCL 321
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK 661
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 322 REKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGPL 381
Query: 662 E-------NGFLPEVID--------ELSNSHNESVETAEL---------ED--------- 688
NG P I E +ES + EL ED
Sbjct: 382 RCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSE 441
Query: 689 --LCSRE-------------LSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLL 727
LC+ E +FQ +L + I+ K + D L+ + + L
Sbjct: 442 NGLCTEETCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLAL 501
Query: 728 DWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
DW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYC
Sbjct: 502 DWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDPWYC 559
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 560 PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPN 619
Query: 847 GESYVYDLFAISNHYGGLGGGH 868
Y+L A+SNHYGG+GGGH
Sbjct: 620 AGPCRYNLIAVSNHYGGMGGGH 641
>gi|449526856|ref|XP_004170429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Cucumis
sativus]
Length = 496
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 310/482 (64%), Gaps = 29/482 (6%)
Query: 6 SSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE 65
+ V M + GS TP+EER +++D+ ++ + KEG++++LI+ RW++ W YV D+
Sbjct: 2 AEVSMCSSSGST-ELTPEEERIMIRDIALAAEANTKEGDIFYLITQRWWQHWIEYVNQDQ 60
Query: 66 P--SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYV 123
P + D SF + + S +RP IDNSD+I + +E+ L EG+DYV
Sbjct: 61 PINTNDGSSFAEIY-DSFGSSMLKRPASIDNSDLIYDAASEDSSAGIEIHDTLLEGRDYV 119
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSK 182
L+PQ+VW +L WY GGP L RK+IS G+ E VEV+ L L+L++ ++ IR+SK
Sbjct: 120 LLPQEVWNQLCLWYGGGPKLARKVISAGLSQTELTVEVYPLRLQLLEVPKGDRSTIRISK 179
Query: 183 KASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV- 241
K + +L+ + C++ + E+ IWDY+ R + ++ D+TLDDA +QMDQDIL+E+
Sbjct: 180 KETIGELHRRACEIFDLNLEQVCIWDYYG-HRKHALMNDMDKTLDDANIQMDQDILVEIL 238
Query: 242 --------------QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFN 287
DNG +T + + +E S+S+L AGG T +
Sbjct: 239 NHGNHNALGGCTSYVQDNG----TTDKEATSIHLEASKSNLISAGGMPNKGASKTEVVQS 294
Query: 288 QYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
Q P SS ++D+ Y + +G GL GL NLGNTCFMNSA+QCLVHTP+ A+Y
Sbjct: 295 QNPTSSI----KELDNAYGQSGVSTRGSSCGLTGLLNLGNTCFMNSAIQCLVHTPEFARY 350
Query: 348 FLGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYN 407
F DY EIN +NPLGM GELA+AFGDLLRKLW+ GR +VAPR FK KLARFAPQFSGYN
Sbjct: 351 FREDYHQEINWQNPLGMVGELAMAFGDLLRKLWAPGRTSVAPRPFKAKLARFAPQFSGYN 410
Query: 408 QHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDV 467
QHDSQELLAFLLDGLHEDLNRVK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV
Sbjct: 411 QHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDV 470
Query: 468 FQ 469
Q
Sbjct: 471 CQ 472
>gi|119585372|gb|EAW64968.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a
[Homo sapiens]
Length = 819
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 292/828 (35%), Positives = 406/828 (49%), Gaps = 137/828 (16%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +G + R
Sbjct: 11 PGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVR 64
Query: 146 KMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK 203
K++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL I E+
Sbjct: 65 KVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAER 124
Query: 204 -ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W+ + + L D T+ DA L Q +++E Q ++G
Sbjct: 125 ETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTW-------------- 169
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
R +L G +G + Y + P S + GL GL
Sbjct: 170 -PRQTLQSNG-----SGFSASYNCQEPPSSHI---------------------QPGLCGL 202
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSALQ ++WS
Sbjct: 203 GNLGNTCFMNSALQ-----------------------------------------QMWSG 221
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ G
Sbjct: 222 RDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANG 281
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTLPLP
Sbjct: 282 RPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKK 341
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
R M V + A+ P + VT+ G DL ALS + E +++A+VYNH+
Sbjct: 342 DRVMEVFLVPADPHCRPTQYRVTVPLMGAVSDLCEALSRLSGIAA-ENMVVADVYNHRFH 400
Query: 563 RFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAP 622
+ F+ L + D+ V G + + ++E+ + S L+G P
Sbjct: 401 KIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASALYGQP 460
Query: 623 LVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGFLPEVI------- 670
L+ + + L+ + AV +S PL + S+ G NG
Sbjct: 461 LLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGEDEEEM 520
Query: 671 ------------------DELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQ 712
DE N +E+ + C + L F SL ++S
Sbjct: 521 EHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQPCPKRL-FTFSL----VNSYGTAD 575
Query: 713 KDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
+S+ GK +K + +DW + LY + H + +K ++ ++L
Sbjct: 576 INSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQPQKKKKTTVALR 635
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLD
Sbjct: 636 DCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLD 695
Query: 827 TFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
T V FPI L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 696 TVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYAK 743
>gi|350595653|ref|XP_003484153.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Sus scrofa]
Length = 951
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 297/898 (33%), Positives = 445/898 (49%), Gaps = 131/898 (14%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+ +R+ +++ +N L+ G +FL+ WY+ WE YV G +
Sbjct: 68 ESQRRQIENGENGRGRPLQAGESWFLVEQHWYQKWEEYVQGGD----------------- 110
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
+ PG I+N+ + ++ + +++ L EG+DYVL+P W L WY G
Sbjct: 111 QDSSTSPGCINNAGLFEDQV------NWRLKKGLVEGEDYVLLPAAAWHYLVNWYGLEHG 164
Query: 140 GPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRG 198
P + RK++ GI ++VEV+ + L L+ D + L + +
Sbjct: 165 QPPVERKVVELPGI---QKVEVYPVELLLVQHSDMDTAHTAQFSHTDSLDLVLHTAREQF 221
Query: 199 I--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
+ QE+ R+W N + S L + T+ DA L+ Q ++ M++ D
Sbjct: 222 LVSPQEETRLW-IKNAEGSFERLCNTHVTVLDAALKTGQVVI----------METRNKDG 270
Query: 257 ALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEK 316
+P A+++ F PG
Sbjct: 271 TWPSAQPH----------AMNSATEEEEDFQGQPG------------------------- 295
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL
Sbjct: 296 --ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADL 353
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+
Sbjct: 354 VKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 413
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL+
Sbjct: 414 ELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLS 473
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
+PLP + R M V + P + + K G DL +AL+ + E +++A+
Sbjct: 474 VPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVS-PERMMVAD 532
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASD 609
V++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A D
Sbjct: 533 VFSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLR-ERTPARD 590
Query: 610 YLKGSE-RKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP 667
Y LFG PL+ + + LS A I + +L + R S + G +++
Sbjct: 591 YNNSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDLEDK 650
Query: 668 EVIDELSNSHNESVETAELEDL--------------------------CSRELSFQLSLT 701
+ + + + S + LE R+ F L
Sbjct: 651 DTLPKPGHVAGSSSQDPGLEQAGPSSGVAGGSRAPVDNSPGPSHWPQRARRKHLFTLQTV 710
Query: 702 DERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTR 759
+ +S + +D+ +P + +DW ++ + Y + V H G+ +KK
Sbjct: 711 NSNGTSDRSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA- 765
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY++
Sbjct: 766 --PVRLQECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTK 823
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+ + KLDT V FPI +LD S+++ ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 824 FSREKLDTLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 881
>gi|156393804|ref|XP_001636517.1| predicted protein [Nematostella vectensis]
gi|156223621|gb|EDO44454.1| predicted protein [Nematostella vectensis]
Length = 1018
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 351/617 (56%), Gaps = 59/617 (9%)
Query: 312 KKGEKG--GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGEL 368
KK +G GL GL NLGNTCFMNS LQCL +T L +YFL +Y DE+NT+NPLGM GE+
Sbjct: 281 KKSYRGTPGLTGLANLGNTCFMNSGLQCLSNTMTLTKYFLSKEYVDELNTDNPLGMKGEI 340
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A A+ DLL ++WS +++APR FK ++ RFAPQFSGY Q DS ELLAFLLDGLHEDLNR
Sbjct: 341 AKAYADLLNQIWSGQSSSIAPRQFKMQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNR 400
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+K KPYIE++D+ GRPD+ VA+E W NH+ RNDS+IVD+F G +KSTLVCP C+K+S+TF
Sbjct: 401 IKMKPYIELRDADGRPDQVVASEAWHNHRQRNDSIIVDIFHGLFKSTLVCPECNKISVTF 460
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DP YL+LPLP R + + P+ F +T+ K G D+ L + D
Sbjct: 461 DPLCYLSLPLPVKKERNIECFLIKNEPMEKPVQFKLTVPKMGSVADMCAILGKQAGVPKD 520
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK--IKLEIVNRWQEKS 606
+ L++ +VYN++ + F+N E +++I D + I Y + + L + R +
Sbjct: 521 K-LVVTDVYNNRFHKIFKN-TESLTTIMDRDDIFIYEVSERVDNPEYLVLPVYQRKKGAR 578
Query: 607 ASDYLKGSERK-LFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGK-ENG 664
+ Y GS K LFG PL+ + ++ L +++ L+ +RR ++ + ENG
Sbjct: 579 LASYTYGSSSKVLFGIPLLISVPKKGLVYSEL---YKMCLNKMRRYVTAPEEKDDDVENG 635
Query: 665 ---------FLPEVIDELSNSHNESVETAELEDLCSRELSFQ------LSLTDERISSCK 709
P+V + S + E+ E + + +S + TDE +
Sbjct: 636 DDKTDKTVCNGPDVEMNEAESGDSDAESDEELEKAYKNVSVNGDEEEDKADTDEETPTVT 695
Query: 710 PIQKDSILKPGKHIKVL--------------------------------LDWTDDVHELY 737
+ + KP K ++ LDWT + E Y
Sbjct: 696 NPKTEVTEKPTKKTRLFSLTLVNMYGSTDMHALADDGKPLKLSHQSYLSLDWTTEKKEKY 755
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
+ + + ++ R+ + L C+ FLT E LG +D WYCPQCK+H+QA+K
Sbjct: 756 YNTNLSEETEEDESVARKPTQRKSVVQLNDCIQLFLTREKLGANDPWYCPQCKKHQQASK 815
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI 857
K DLW LP+VLV HLKRFSY+ ++K+DT VNFP+ LD+S Y+ KDG +YDL +
Sbjct: 816 KFDLWCLPEVLVIHLKRFSYTSLWRDKIDTLVNFPLCGLDMSDYVIGKDGPPPLYDLIGV 875
Query: 858 SNHYGGLGGGHYTAYAK 874
SNHYGG+GGGHYTAY +
Sbjct: 876 SNHYGGMGGGHYTAYCR 892
>gi|145340853|ref|XP_001415532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575755|gb|ABO93824.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/592 (40%), Positives = 338/592 (57%), Gaps = 36/592 (6%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELA 369
AK G +G AGL NLGNTCFMNSALQCL H+ L YFL D Y +INT+NP+GM GELA
Sbjct: 25 AKVGTRGK-AGLSNLGNTCFMNSALQCLSHSSLLTDYFLSDKYEVDINTDNPIGMGGELA 83
Query: 370 LAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +L+ LW G V PR FK LARFAPQFSGY Q D+QELLAFLLDGLHEDLNRV
Sbjct: 84 KEYANLIGALWRDGALTVTPRKFKSSLARFAPQFSGYMQQDAQELLAFLLDGLHEDLNRV 143
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
K KPY +D+ GR DE+VANE W+ H ARN+S IVD FQGQY+S LVCP CS S+ FD
Sbjct: 144 KNKPYATERDAEGRSDEDVANESWEAHTARNNSCIVDTFQGQYRSKLVCPSCSNKSVKFD 203
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL-KID 548
PFMYL++P+PS R + VT+ + + + L K+G L+ AL A + +D
Sbjct: 204 PFMYLSIPVPSARERMIKVTLVSYGDELSAITYGLKLPKNGEIAMLLSALCEAADIDTMD 263
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF----DRKQGGKIKLEIVNRW-- 602
E ++L EVYNH++ + N + ++ I++ + I A+R D + +V+R
Sbjct: 264 ERVVLCEVYNHRMEKTLSNMSYSLTDIRERDVIYAHRLPAIKDNDNVETVDTVLVHRKEL 323
Query: 603 -QEKSASDYLK---GSERKLFGAPLVTYLEEEHLSGADIDIA------VSKLLSPLRRTY 652
Q K+ ++ + FG P + + + A D A V K + T
Sbjct: 324 NQNKTPYSHVSSVAATTMVRFGFPWIVPVSVPKGTKAGPDHARFVEKEVEKFSAKFAHTN 383
Query: 653 SSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQ 712
S K+ +G D ++ +V + + + S + S
Sbjct: 384 SMEKSCSPTTSG------DTEGSASRRAVAEKDSRLFKMKYTNKSASASFHEYGSTTAST 437
Query: 713 KDS-----ILKPGKHIKVLLDWTDD-VHELYDPSYIKDLPVVHK--TGFTVKKTRQEAIS 764
DS + H V +DW+ + + +D ++ H T ++ + +
Sbjct: 438 SDSHEMQYTIASSMHC-VAIDWSSKALSQFFDEELLEREIEEHPSVTENAIENSGTQGTP 496
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L SC+++F+ EEPLG DDMWYC QCK+H QA KKLDLW +P +LV HLKRFSYSR ++K
Sbjct: 497 LASCIESFIQEEPLGKDDMWYCKQCKDHVQAMKKLDLWRMPPILVMHLKRFSYSRTWRDK 556
Query: 825 LDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+DT ++FP+ LD++ Y+ + G + +YDL+A+ NH+GG+GGGHYTAY +
Sbjct: 557 IDTLIDFPLNTLDMTPYVLPNASSGPAPIYDLYAVVNHFGGMGGGHYTAYTR 608
>gi|301764841|ref|XP_002917823.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11-like [Ailuropoda melanoleuca]
Length = 952
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 294/897 (32%), Positives = 447/897 (49%), Gaps = 129/897 (14%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+ +R+ V++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 69 ESQRRQVENGESGRERPLRAGESWFLVEQHWYKQWEVYVQGGDQ--DSGTF--------- 117
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
PG I+N+D+ ++ + +++ L EG+DYVL+P W L WY G
Sbjct: 118 ------PGCINNADLFEDQV------NWRLKKGLVEGEDYVLLPAAAWHCLVDWYGLEHG 165
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P + RK++ + + ++VEV+ + L L+ D + L + + + +
Sbjct: 166 QPPIERKVVE--LPSVQKVEVYPVELLLVRHSDMDTPHTAQFSHTDSVDLVLRTAREQFL 223
Query: 200 --EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA 257
QE+ R+W N + S L + T+ DA L+ Q +++E + +G
Sbjct: 224 VSPQEETRLW-IKNAEGSFERLCNTRVTVLDAALKSGQVVIMETRNKDGTW--------- 273
Query: 258 LVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG 317
PS + +T ++ D+ + +
Sbjct: 274 -----PSAQPQAV-------------------------NTALEEDEEFQG--------QP 295
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 296 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLV 355
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS + K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 356 KQAWSGHPXXXXXXXXQTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 415
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 416 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 475
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 476 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGMS-PERMMVADV 534
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 535 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRSAIGENSREDVVLPIYLR-ERTPARDY 592
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYS--------------- 653
LFG PL+ + + LS A I + +L + R S
Sbjct: 593 NNSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDMEDKD 652
Query: 654 -----------SAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
S++ G ++ G V + S + R+ F L +
Sbjct: 653 NIPKPGHVAGGSSQNSGPEQAGPSSGVAGGSRAPVDNSPGPSHWPQRARRKHLFTLQTVN 712
Query: 703 ERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQ 760
+S + +D+ +P + +DW ++ + Y + V H G+ +KK
Sbjct: 713 SNGTSDRSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA-- 766
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ L C++ F T E L ++ WYCP CK+ + ATKKLDLW LP+ L+ HLKRFSY+++
Sbjct: 767 -PVRLQECIELFTTVETLEKENPWYCPTCKQQQLATKKLDLWTLPETLIIHLKRFSYTKF 825
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+ KLDT V FPI +LD S+++ ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 826 SREKLDTLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 882
>gi|147827032|emb|CAN59993.1| hypothetical protein VITISV_009779 [Vitis vinifera]
Length = 518
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/461 (49%), Positives = 301/461 (65%), Gaps = 13/461 (2%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
+P+EER ++D ++ KEG+ ++LI+ RW++ W YV D+ + ++S S H +
Sbjct: 16 SPEEERLAIRDFVISAEAHTKEGDTFYLITQRWWQQWLEYVNQDQANNIDVSSLSEHCDS 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
VSS +RP IDNSD+I + +E+ L EG+DY+L+PQ+VW +L+ WY GG
Sbjct: 76 VSSSDVKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILLPQEVWNQLYAWYGGG 135
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P LPRK+I+ G+ VEV+ L L+L+ + + IR+SKK + +L+ + C++ +
Sbjct: 136 PTLPRKVINSGLSQTGLSVEVYPLRLQLVVVPKGAHSTIRISKKETIGELHRRACEIFDL 195
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM---------- 249
E+ IWDY+ R + ++ D+TLDDA +Q DQD+L+EV + S
Sbjct: 196 NMEQVCIWDYYG-HRKHALMNDMDKTLDDANIQTDQDVLVEVHSNGSSSAFGGCMSSVQE 254
Query: 250 -DSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
S + V +EPS+SSL+IAGG + S G + + S ++D Y
Sbjct: 255 NGSADKETMSVLVEPSKSSLSIAGGLSASKGVSRSCSSELSQSQNLTSPVRELDSTYGVS 314
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGEL 368
+ +G GGL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLGM GEL
Sbjct: 315 GVSTRGATGGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHKEINWQNPLGMVGEL 374
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
ALAFGDLLRKLW+ GR VAPR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR
Sbjct: 375 ALAFGDLLRKLWAPGRTPVAPRPFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 434
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
VK KPYI+ +D+ GRPDEEVA+E W NH ARNDS+IVDV Q
Sbjct: 435 VKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQ 475
>gi|291393673|ref|XP_002713400.1| PREDICTED: ubiquitin specific protease 4 [Oryctolagus cuniculus]
Length = 859
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 306/906 (33%), Positives = 424/906 (46%), Gaps = 166/906 (18%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+G R +L G +G + Y + P S
Sbjct: 221 DGTW---------------PRQTLQSNG-----SGFSASYSCQEPPSSHV---------- 250
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGM 364
+ GL GL NLGNTCFMNSALQ V
Sbjct: 251 -----------QPGLCGLGNLGNTCFMNSALQTQV------------------------- 274
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
GR A PQFSGY Q DSQELLAFLLDGLHE
Sbjct: 275 ------------------GRFA--------------PQFSGYQQQDSQELLAFLLDGLHE 302
Query: 425 DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
DLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KV
Sbjct: 303 DLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV 362
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
S+TFDPF YLTLPLP R M V + A+ P + VT+ G DL ALS
Sbjct: 363 SVTFDPFCYLTLPLPLKKDRVMEVFLVPADPRCRPTQYRVTVPLMGAVSDLCDALSRLSG 422
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQE 604
+ E +++ +VYNH+ + F+ L + D+ V G + + ++E
Sbjct: 423 IAA-ENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSSSVDGSECVTLPVYFRE 481
Query: 605 KSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHG 659
+ + S L+G PL+ + + L+ + AV +S PL S+
Sbjct: 482 RKSRPSSTSSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYVKHPLPDECGSSPLEP 541
Query: 660 GKENGFLPEVI--------------DELSNSHNESVETAELEDL-----------CSREL 694
G NG ++LS + E E C + L
Sbjct: 542 GACNGSRGSCEGEDEEEMEHQEAGKEQLSETEGSGEEELGGEPCEAAHRKAGGQRCPKRL 601
Query: 695 SFQLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVV 748
F SL ++S +S+ GK ++ + +DW + LY +
Sbjct: 602 -FTFSL----VNSYGTADINSLATDGKLLRLSSRSTLAIDWDSETRSLYYDEQESEAFEK 656
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H + +K ++ A++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +L
Sbjct: 657 HVSMLQPQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKIL 716
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGH 868
V HLKRFSYSRY ++KLDT V FP+ L++S+++ YVYDL A+SNHYG +G GH
Sbjct: 717 VVHLKRFSYSRYWRDKLDTAVEFPVRALNMSEFVCDPSARPYVYDLIAVSNHYGAMGVGH 776
Query: 869 YTAYAK 874
YTAYAK
Sbjct: 777 YTAYAK 782
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 301/886 (33%), Positives = 428/886 (48%), Gaps = 133/886 (15%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
+LI +RW++ W++YV FDS M V +R PGPIDNS + S+
Sbjct: 13 YLIDSRWFKQWKKYV----------GFDSWDMYSVG-ERNLFPGPIDNSGLF------SD 55
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFX 162
+ ++ +L + DYVLVP + W KL WY +G + RK++ G+ V +VEV+
Sbjct: 56 PESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYL 115
Query: 163 LCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLD 220
L LKL ++ D + + KA T EK + KL I E+ R+W+ + + L
Sbjct: 116 LELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLS 174
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
D T+ DA L Q +++E Q ++G
Sbjct: 175 KLDNTVQDAGLYQGQVLVIEPQNEDG---------------------------------- 200
Query: 281 TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVH 340
T + Q GS F ++ Y+ + GL GL NLGNTCFMNSALQCL +
Sbjct: 201 TWPRQTQQSNGSGFPAS-------YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSN 253
Query: 341 TPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
T L YFL D Y EIN +NPLGM GE+A A+ +L+R++WS A VAPR FK ++ RF
Sbjct: 254 TAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIRQMWSGREAHVAPRMFKTQVGRF 313
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDE----EVANECWKN 455
APQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD + C +
Sbjct: 314 APQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDASGRLDQMAVCGET 373
Query: 456 HKARNDSLIVDVFQGQYKST------LVCPVCSKVSI--TFDPFMYLTLPLPS-TVTRTM 506
+D + + T L CP+ ++ T L PS + +
Sbjct: 374 AACSDDPFLHCCLSAGWLPTQGPCPLLCCPLIWALTAPGTVSRRALLPSSRPSLLLEHPV 433
Query: 507 TVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE 566
TV V P+ + VT+ G DL ALS + E +++ +VYNH+ + F+
Sbjct: 434 TVAVS-------PLQYRVTVPLMGAVSDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQ 485
Query: 567 NPAELISSIKDDEHIVAYRFDRKQGGK--IKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L + D+ V G I L I R ++ S G+ L+G PL+
Sbjct: 486 MDEGLNHIMPRDDIFVYEVCSTSVDGSECITLPIYFRERKSRPSSTSPGA--VLYGQPLL 543
Query: 625 TYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKAHGGKENGFLPEVI--------- 670
+ + L+ + AV +S PL SA G NG
Sbjct: 544 VSVPKHKLTLESLYQAVCDRISRYIKQPLPAESGSAPLELGACNGSRGSCEGEDEEEMEH 603
Query: 671 ----------------DELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD 714
DEL + +E+ + + + R +F L ++S +
Sbjct: 604 QEEGREQLSDAEGSGEDELGHDPSEATQKVKGQPCSKRLFTFSL------VNSYGTADIN 657
Query: 715 SILKPGKHIK------VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSC 768
S+ GK +K + +DW + LY + H + +K ++ A++L C
Sbjct: 658 SLATDGKLLKLNSRSTLAIDWDSETRNLYYDEQESEAYEKHASMLQPQKKKKAAVALRDC 717
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLDT
Sbjct: 718 IELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTV 777
Query: 829 VNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V FPI L++S+++ YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 778 VEFPIRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGVGHYTAYAK 823
>gi|327265717|ref|XP_003217654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Anolis
carolinensis]
Length = 908
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 301/889 (33%), Positives = 439/889 (49%), Gaps = 146/889 (16%)
Query: 43 GNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGN 102
G ++LI +RW++ W++YV D + N+ P++ PGPIDNS +
Sbjct: 46 GESWYLIDSRWFKQWKKYVGFDSWDLYNVG--EPNL---------YPGPIDNSGLF---- 90
Query: 103 GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNEKRV 158
++ + ++ +L + DYVLVP + W KL WY +G + RK++ G+ V +V
Sbjct: 91 --ADSETQTLKEHLIDELDYVLVPTEAWNKLVNWYGCIEGQKPILRKVVEYGLFVKHCKV 148
Query: 159 EVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK--LRGIEQEKARIWDYFNKQRST 216
EV+ L LKL + D++ V KA T EK + + ++ R+W + +
Sbjct: 149 EVYLLELKLCQNNDSTNLVSSYFSKADTVATIEKEMRKQFNIPDGKEIRLWSRY-MSNTY 207
Query: 217 SPLDVSDQTLDDAMLQMDQDILLEVQVDNGI---------SMDSTGNDLALVPIEPSRSS 267
L D T+ DA L Q +L+EV+ ++G S +T +LA + S
Sbjct: 208 EQLSKLDSTIQDAGLYQGQVVLIEVKNEDGSWPRQSSQTKSSTATSRNLATSSKSSAGSC 267
Query: 268 LTIAGGPALSNGHTTG-YRFNQYPG---SSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
++ A++NG + Y N G SSF F Y++ ++ + + G L GL
Sbjct: 268 SSVVASSAITNGDSNNSYGLNSSHGKGGSSFSCNF------YNNRESSPQSQPG-LCGLS 320
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSALQCL +TP L +YFL D Y EIN ENPLGM GE+A A+ +L++++WS
Sbjct: 321 NLGNTCFMNSALQCLSNTPPLTEYFLEDEYEAEINQENPLGMRGEIAEAYAELIKQMWS- 379
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
G+ AP
Sbjct: 380 -----------GRYTHVAP----------------------------------------- 387
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
R + VA E W+NH+ RNDS+IVD+F G +KSTLVCP CSKVS+TFDPF YLTLPLP
Sbjct: 388 RIFKVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPMKK 447
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
RTM V +A+ P V + G DL ALS + E +++ +VYNH+
Sbjct: 448 DRTMEVLFVFADPQRKPSQCRVVVPMMGGVTDLCDALSQLSGIPA-ENMVVTDVYNHRFH 506
Query: 563 RFFENPAELISSIKDDEHIVAYRFDR-KQGGKIKLEIVNRWQEKSASDYLKGSERKLFGA 621
+ F+ E +S+I ++I Y + + G + + ++EK A L+G
Sbjct: 507 KIFQM-DEGLSNIMPKDNIFVYEISKPAEDGAECVTLSIYFREKKARQSSATPATVLYGQ 565
Query: 622 PLVTYLEEEHLSGADIDIAVSKLLSPLRR------------------------TYSSAKA 657
PL+ + + L+ +D S +L + R + S +
Sbjct: 566 PLLIAVPKHKLT---LDYLYSVILERIGRYVKIPSKEDCPDVCSDNETCNGSNSVSEGEV 622
Query: 658 ------HGGKENGFLPEVIDELSNSHNE---SVETAELEDLCSRELSFQLSLTDERISS- 707
+G +EN E I E S +E VE+ + E L R+ F SL + +S
Sbjct: 623 EEMEHQNGEEENK---EKILETDASQSEDGTQVESGK-EGLHHRKRLFTFSLVNSYGTSE 678
Query: 708 --CKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
P + ILK H V +DW D +L + H + F +K R+ A++L
Sbjct: 679 INSLPTE-GKILKLSSHATVAIDWDSDTRKLLFDEHEAQAFEKHCSMFQPQK-RKTAVAL 736
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KL
Sbjct: 737 RDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKL 796
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
DT V FPI +L++S+++ YVYDL A+SNHYGG+G GHYTAYAK
Sbjct: 797 DTVVEFPIRDLNMSEFVCDPAASPYVYDLIAVSNHYGGMGVGHYTAYAK 845
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 253/649 (38%), Positives = 364/649 (56%), Gaps = 54/649 (8%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP E Q Q + + LK+G+ ++LI +RW++ W++YV FDS M
Sbjct: 27 TPSTESQ-KQTIGSLLKTSLKKGDEWYLIDSRWFKQWKKYV----------GFDSWDMYN 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY--- 137
V +R+ PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY
Sbjct: 76 VG-ERSLYPGPIDNSGLF------SDQETQALKEHLIDELDYVLVPTEAWNKLVSWYGCL 128
Query: 138 KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
+G + RK++ G+ V +VEV+ L L L ++ + V R KA T EK ++
Sbjct: 129 EGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTIDTIEK--EM 186
Query: 197 RGI----EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
R + +E+ R+W+ + + L+ D T+ DA L Q +++E + ++G
Sbjct: 187 RTLFNIPSEEETRLWNKY-MSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGTWPRQA 245
Query: 253 GNDLALVPIEPSRS-----SLTIAGGPALSNGHTT---GYRFNQYPGSS--FGSTFMDMD 302
+ + PSR+ L+ PA++NG + GY N SS +G
Sbjct: 246 SHPKS--STTPSRNFTTSPKLSSNSSPAVTNGDSNCSPGYTLNNSTSSSNRYGGY----- 298
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
+ Y SYN + + GL GL NLGNTCFMNSALQCL + L +YFL D Y EIN ENP
Sbjct: 299 NSYSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLTDQYEAEINRENP 358
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+A A+ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDG
Sbjct: 359 LGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDG 418
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNRVK+KPY+ ++D+ GRPDE VA E W NH+ RNDS+IVD+F G +KSTLVCP C
Sbjct: 419 LHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPEC 478
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SKVS+TFDPF YLTLPLP RTM V + ++ P + V + K G DL ALS
Sbjct: 479 SKVSVTFDPFCYLTLPLPLKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGTITDLCSALSK 538
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
C + E +++A+VYNH+ + + + ++ I + + I Y + ++ L + R
Sbjct: 539 LCGIP-PENMVVADVYNHRFHKLYRR-DDGLNQIMEKDDIFVYEVQEENSERMNLPVYFR 596
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
E+ + + LFG PL+ + +L D+ K+L + R
Sbjct: 597 --ERHSKHAGSSTSTMLFGQPLLITVPRHNLIA---DVLYDKILERIGR 640
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
++LK H V +DW + +LY + H++ ++ ++ ++L C++ F T
Sbjct: 775 NVLKLNPHSTVAIDWDTESKKLYYDEPEAEAYEKHESMLQPQR-KKTTVALRECIELFTT 833
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V+FPI
Sbjct: 834 METLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIR 893
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+L++S+++ Y+YDL A+SNHYGG+GGGHYTAY K
Sbjct: 894 DLNMSEFVCDPKAGPYIYDLIAVSNHYGGMGGGHYTAYGK 933
>gi|291000604|ref|XP_002682869.1| ubiquitin-specific processing protease [Naegleria gruberi]
gi|284096497|gb|EFC50125.1| ubiquitin-specific processing protease [Naegleria gruberi]
Length = 1073
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 300/941 (31%), Positives = 464/941 (49%), Gaps = 153/941 (16%)
Query: 22 PD--EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMN 79
PD ++R+ ++ ++N+S K G+ + +IS+ W++ W+ YV + N +
Sbjct: 149 PDAKKQREKIESIENKSPF--KAGSTFVIISSSWFKIWKEYV-----NYPNENVGKKKHK 201
Query: 80 GVSSKRAERPGPIDNSDIIQ-----NG------------NGSSEGDDL---EVRRNLEEG 119
S K++ PGPIDNSDIIQ NG N + +G L ++R++
Sbjct: 202 ETSHKKSPAPGPIDNSDIIQEVLIYNGFSLKHPLVPEFTNFTRDGSVLFTTVLKRDITR- 260
Query: 120 QDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNE--KRVEV--FXLCLKLIDSR- 171
QD+ V ++ ++ L WY + R++I +G+ N +RVE+ + L + +++ +
Sbjct: 261 QDFEFVSEESYDLLAHWYGEINNSQKIVRRVIVDGLENNQMRRVEIHPYILNIYMVNEKG 320
Query: 172 ---DNSQTVIRLSKKASTRQL-------YEKVCKLRGIEQEKARIWDYFNKQRSTSPL-- 219
+++T I++SKK +T+ L +E + + R+W K+ S++
Sbjct: 321 TIMKDTKTTIQVSKKLATKDLKMLGCVLFESTIIQKTSTLKNCRMW---RKEDSSASAIA 377
Query: 220 DVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNG 279
D QTL+ A++ Q I+ E + G + L + + S + +
Sbjct: 378 DSESQTLEKALIFDGQSIVFEFK--------QNGGEFPLEIFKKKQESNDASDEEEDEDD 429
Query: 280 HTTGYRFNQ-------YPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
+ ++ Y S+FG + + K +K GL GL+NLGNTCFMN
Sbjct: 430 EEKRSKLSEIWDSIKDYSFSTFGI----------ATPASGKSKKRGLCGLRNLGNTCFMN 479
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SA+QCL +T L YF+ G Y+ INT NPLG G+LA F L++++WS G A P
Sbjct: 480 SAIQCLSNTVPLKNYFISGLYAKHINTSNPLGTKGKLANNFASLIKEMWSGG-ANFTPTN 538
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK +++FAPQFSGYNQHDSQEL ++LLDGLHEDLN+V KPYIE KD GRPDE +A E
Sbjct: 539 FKYAISQFAPQFSGYNQHDSQELTSYLLDGLHEDLNKVINKPYIEAKDYDGRPDEVIAKE 598
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+ H RNDS+IVD+FQGQ KSTL+C VC+K+S+ FDPFMYL++P+ ++ + V +
Sbjct: 599 SWEQHLKRNDSVIVDLFQGQLKSTLICNVCNKISVKFDPFMYLSVPVGKSMPHRLDVILL 658
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID-EGLLLAEVYNHQIFRFF----- 565
G +TV L K + +LA A D + L + I R F
Sbjct: 659 NTENGGRATKYTVELPKQSTVQ--VLATQFAKVSGRDPQKLQFFAMAGFSIGRQFSFNDS 716
Query: 566 ---------ENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER 616
P L + + DD Y + + I R+ + +
Sbjct: 717 VKIIDPNAKSTPKVLCADVPDDYSPEKY---------LIIPIRQRYPSEEG-------KF 760
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH--GGKENGF---LPEVID 671
K G P V ++++E + DI S L +++ + + KE+G L E I+
Sbjct: 761 KSVGIPFVLFVKKEISTKDFYDILWSHLQRVAKKSPEDPETNLQPTKEDGQEYPLAERIE 820
Query: 672 ELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTD 731
L + + + A + F+ ++ D+ + ++ I +L D D
Sbjct: 821 ILRQTLFPAFDPA--------NIPFKFTVIDKSV---------EVVNDTCGIPILYDDRD 863
Query: 732 DVHELY----DPSYI------------KDLPVVH--KTGFTVKKTRQEAISLFSCLDAFL 773
D+ + Y D Y K+ VH + T + R + ISL CL
Sbjct: 864 DMVKEYLQQEDNYYFSVDWFDVKMLKTKETVTVHVAEQNITNEAPRSQNISLDDCLKLNS 923
Query: 774 TEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
E LG D WYCP CK+H A K+ +W P++L+ HLKRF ++R+ + K++ V++PI
Sbjct: 924 EMEQLGERDQWYCPDCKKHVCAFKQCCVWSSPEILIIHLKRFGFNRFGREKVNALVDYPI 983
Query: 834 LNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
NLDLS YM K + +YDLFAIS H GGL GGHY +YAK
Sbjct: 984 YNLDLSDYMVRKPEDHMLYDLFAISCHTGGLYGGHYYSYAK 1024
>gi|122692453|ref|NP_001073777.1| ubiquitin carboxyl-terminal hydrolase 11 [Bos taurus]
gi|119936039|gb|ABM06061.1| ubiquitin specific protease 11 [Bos taurus]
gi|296470784|tpg|DAA12899.1| TPA: ubiquitin specific peptidase 11 [Bos taurus]
Length = 756
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/597 (39%), Positives = 333/597 (55%), Gaps = 51/597 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 100 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLV 159
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNR+K+K Y+E
Sbjct: 160 KQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRIKKKEYVE 219
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 220 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 279
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 280 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGIS-PERMMVADV 338
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 339 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLR-ERTPARDY 396
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLSGADI---------------------------DIAVS 642
LFG PL+ + + LS +
Sbjct: 397 NSSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDLEDKD 456
Query: 643 KLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
+L P R T S++ G ++ G V+ + S + R+ F L +
Sbjct: 457 RLPKPGRVTAGSSQDPGLEQAGPSSRVVSRSRAPVDNSPGPSHWPQRARRKHLFTLHTVN 516
Query: 703 ERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQ 760
+S + +D+ +P + +DW ++ + Y + V H G+ +KK
Sbjct: 517 SNGTSDRSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA-- 570
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++
Sbjct: 571 -PVQLQECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKF 629
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+ KLDT V FPI +LD S+++ +S Y YDL A+SNHYGGL GHYT +A
Sbjct: 630 SREKLDTLVEFPIRDLDFSEFVIKPQNDSSRELYKYDLIAVSNHYGGLRDGHYTTFA 686
>gi|410919011|ref|XP_003972978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Takifugu
rubripes]
Length = 1015
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/623 (37%), Positives = 356/623 (57%), Gaps = 37/623 (5%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L + +I LK Q L++G+ ++L+ + W++ W++YV D
Sbjct: 1 MAEGGAADLET---QRGEIAALLKTQ----LRKGDTWYLVVSHWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
++D M ++ PGP+DNS +++ +GD L ++ +L + DY+LVP +
Sbjct: 49 --NWDKYQM----GEQDVYPGPVDNSGLLR------DGDVLAIKEHLIDELDYILVPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEVF LKL + + R KA
Sbjct: 97 WNKLVSWYGLTEGQEPIARKVVEQGMFVKHCKVEVFLTELKLCRDSNMDNVITRRFSKAD 156
Query: 186 TRQLYE-KVCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T + E ++ KL I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDMIEHEMRKLFSIPDEKETRLWNRY-MTNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G +G+ + S+L +L+N H + + SSF + +
Sbjct: 216 EDGTWPRGSGSTAPKSSGASNLSALPKISPSSLTNNHNSSFNSRNVKNSSF--SLPSYHN 273
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + ++ E+ GL GL NLGNTCFMNSA+QCL + P L +YFL D Y+DE+N +NPL
Sbjct: 274 SYDYSDQSRPSERSGLCGLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPL 333
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ +L++++WS + V PR FK ++ RFAPQFSGY Q DS ELLAFLLDGL
Sbjct: 334 GMKGEIARAYAELIKQIWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGL 393
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCPVCS
Sbjct: 394 HEDLNRIRKKPYIQLKDANGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCS 453
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP RT+ V + + P + +T+ K G DL +LS
Sbjct: 454 KVSVTFDPFCYLTLPLPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYISDLCTSLSYL 513
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++ NH R F L S I +DD ++ +R + + V+
Sbjct: 514 SGVPADK-MIVTDICNHCFHRIFATNENLSSIIERDDIYVFELPVNRVEDTDHVVIPVHL 572
Query: 602 WQEKSASDYLKGSERKLFGAPLV 624
++ S Y + LFG P +
Sbjct: 573 REKYKQSGY-NHTSTTLFGQPFL 594
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 104/149 (69%), Gaps = 3/149 (2%)
Query: 727 LDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
LDW + + Y D + ++D + K ++ L C++ F T+E LG +D WY
Sbjct: 755 LDWEPETKKKYFDETVVEDFDKHESMDY--KPQKKAFFKLKDCIELFTTKEKLGAEDPWY 812
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK 845
CP CK+H+QATKKLDLW LP VLV HLKRFSYSRY+++KLD+ V+FP+ +LD+S+++ +
Sbjct: 813 CPNCKQHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDSLVDFPLRDLDMSEFLINP 872
Query: 846 DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ YDL A+SNHYGG+GGGHYTAYAK
Sbjct: 873 NAGPCRYDLIAVSNHYGGMGGGHYTAYAK 901
>gi|297852782|ref|XP_002894272.1| hypothetical protein ARALYDRAFT_892011 [Arabidopsis lyrata subsp.
lyrata]
gi|297340114|gb|EFH70531.1| hypothetical protein ARALYDRAFT_892011 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/492 (45%), Positives = 302/492 (61%), Gaps = 16/492 (3%)
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
L +FGDLLR LW+ G +AV+P K KL R+APQFSG+NQHDSQELL FLLDGLHEDLN
Sbjct: 2 LIYSFGDLLRSLWAPGASAVSPSILKAKLDRYAPQFSGFNQHDSQELLVFLLDGLHEDLN 61
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
R+K KPY+E KD G P+EEVA+E W+NH A NDS+IVD+ GQ KST+VCP+C K S+T
Sbjct: 62 RIKTKPYVEAKDGDGLPEEEVADEYWRNHVALNDSIIVDLCLGQLKSTIVCPICKKGSVT 121
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPFMYL+LPLP T RTM + V A+G LP TV + + G +DL AL TAC L+
Sbjct: 122 FDPFMYLSLPLPCTSMRTMDLIVMSADGGSLPALLTVNVPEFGRFEDLQKALVTACSLQE 181
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
DE LL+ EVYN+QI RF E P + ++ I +V YR + + ++ E+
Sbjct: 182 DETLLVTEVYNNQIIRFIEEPTDSLTIIGYGAKLVVYRLKKDANNSRLIVFTHQKLEEQV 241
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR--RTYSSAKAHGGKENGF 665
K FG PLV+ L + +G+D++ KLLS + + +A E
Sbjct: 242 ILGKSNPTWKGFGIPLVSRLCDVE-NGSDVENLYLKLLSSFKMPTEFFTANLEDPIEEDA 300
Query: 666 LPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP--IQKDSILKPGKHI 723
+ + + S S + T L D R L LT++R +S + +++ + K +
Sbjct: 301 TDKAVTDGSTSTDAKETTESLPDPVLR-----LYLTEDRGNSIQSEILKEKPLNSKSKVV 355
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
VL W + YD + LP V K F K+ ++E++SL CL+A+L EEPLGPD+M
Sbjct: 356 NVLARWPVKELDAYDTCLLSYLPEVSK--FGTKRPQEESVSLDKCLEAYLAEEPLGPDNM 413
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
W CP CK+ RQA KKLDLW LP++LV HLKRFS L NKL+ V+FP+ +LDLS Y+
Sbjct: 414 WDCPGCKKKRQAIKKLDLWRLPEILVIHLKRFS----LNNKLEDDVDFPLDDLDLSSYIS 469
Query: 844 SKDGESYVYDLF 855
K+G++Y Y L+
Sbjct: 470 YKNGQTYRYMLY 481
>gi|193786257|dbj|BAG51540.1| unnamed protein product [Homo sapiens]
Length = 689
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/594 (38%), Positives = 334/594 (56%), Gaps = 46/594 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 34 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLV 93
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 94 KQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 153
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 154 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 213
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R + V + P + + K G DL +ALS + E +++A+V
Sbjct: 214 PLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADV 272
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYL 611
++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++ A DY
Sbjct: 273 FSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYN 331
Query: 612 KGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS--------------- 654
LFG PL+ + + + + ++ + +L + + S
Sbjct: 332 NSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKDDEEDKD 391
Query: 655 ---AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQLSLTDER 704
+ GG PE S N + T++ R+ F L +
Sbjct: 392 DVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNSN 451
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAI 763
+S + + + + +DW ++ + Y + V H G+ +KK +
Sbjct: 452 GTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKA---PV 505
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ +
Sbjct: 506 RLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSRE 565
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 566 KLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 619
>gi|119936054|gb|ABM06064.1| ubiquitin specific protease 11 [Bos taurus]
Length = 802
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 236/615 (38%), Positives = 339/615 (55%), Gaps = 52/615 (8%)
Query: 305 YDSYNTAKKGE----KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
+D+ +T ++ E + G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N
Sbjct: 124 HDTRSTLEEEEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFC 183
Query: 360 NPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
NPLGM GE+A A+ DL+++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLL
Sbjct: 184 NPLGMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLL 243
Query: 420 DGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
DGLHEDLNR+K+K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP
Sbjct: 244 DGLHEDLNRIKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCP 303
Query: 480 VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
C VS+TFDPF YL++PLP + R M V + P + + K G DL +AL
Sbjct: 304 DCGNVSVTFDPFCYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVAL 363
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK----- 593
+ + E +++A+V++H+ ++ ++ E +SSI D + I Y R G+
Sbjct: 364 AKHTGIS-PERMMVADVFSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSRED 421
Query: 594 IKLEIVNRWQEKSASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI--------------- 637
+ L I R + A DY LFG PL+ + + LS +
Sbjct: 422 VVLPIYLR-ERTPARDYNSSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRP 480
Query: 638 ------------DIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
+L P R T S++ G ++ G V+ + S +
Sbjct: 481 SSDDEDDGDEKDLEDKDRLPKPGRVTAGSSQDPGLEQAGPXSRVVSRSRAPVDNSPGPSH 540
Query: 686 LEDLCSRELSFQLSLTDERISSCKPIQKDSI--LKPGKHIKVLLDWTDDVHELYDPSYIK 743
R+ F L + +S + + + + +DW ++ + Y
Sbjct: 541 WPQRARRKHLFTLHTVNSNGTSDRSTFNEDTHGVSFSSQPYIAIDWEPEMKKRYYDEVEA 600
Query: 744 DLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
+ V H G+ +KK + L C++ F T E L ++ WYCP CK+H+ ATKKLDLW
Sbjct: 601 EGYVKHDCVGYVLKKA---PVQLQECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLW 657
Query: 803 MLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAIS 858
MLP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++ +S Y YDL A+S
Sbjct: 658 MLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIKPQNDSSRELYKYDLIAVS 717
Query: 859 NHYGGLGGGHYTAYA 873
NHYGGL GHYT +A
Sbjct: 718 NHYGGLRDGHYTTFA 732
>gi|1276912|gb|AAC50450.1| UHX1 protein [Homo sapiens]
gi|119579692|gb|EAW59288.1| ubiquitin specific peptidase 11, isoform CRA_a [Homo sapiens]
gi|194378128|dbj|BAG57814.1| unnamed protein product [Homo sapiens]
gi|1588732|prf||2209322A UHX1 gene
Length = 690
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 334/595 (56%), Gaps = 47/595 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 34 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLV 93
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 94 KQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 153
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 154 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 213
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R + V + P + + K G DL +ALS + E +++A+V
Sbjct: 214 PLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADV 272
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYL 611
++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++ A DY
Sbjct: 273 FSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYN 331
Query: 612 KGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS--------------- 654
LFG PL+ + + + + ++ + +L + + S
Sbjct: 332 NSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVTKPNSDDEDDGDEKEDDEEDK 391
Query: 655 ----AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQLSLTDE 703
+ GG PE S N + T++ R+ F L +
Sbjct: 392 DDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNS 451
Query: 704 RISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEA 762
+S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 452 NGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKA---P 505
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ +
Sbjct: 506 VRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSR 565
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 566 EKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 620
>gi|55846814|gb|AAV67411.1| ubiquitin-specific protease 11 [Macaca fascicularis]
Length = 679
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 334/595 (56%), Gaps = 47/595 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 31 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEAYADLV 90
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 91 KQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 150
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 151 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 210
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R + V + P + + K G DL +ALS + E +++A+V
Sbjct: 211 PLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADV 269
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYL 611
++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++ A DY
Sbjct: 270 FSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYN 328
Query: 612 KGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS--------------- 654
LFG PL+ + + + + ++ + +L + + S
Sbjct: 329 NSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKEDDEEDK 388
Query: 655 ----AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQLSLTDE 703
+ GG PE S N + T++ R+ F L +
Sbjct: 389 DDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTLQTVNS 448
Query: 704 RISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEA 762
+S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 449 NGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKKA---P 502
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ +
Sbjct: 503 VRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSR 562
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
KLDT V FPI +LD S+++ ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 563 EKLDTLVEFPIRDLDFSEFVIQPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 617
>gi|426257121|ref|XP_004022183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 1 [Ovis
aries]
Length = 756
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/597 (39%), Positives = 335/597 (56%), Gaps = 51/597 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 100 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLV 159
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 160 KQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 219
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 220 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 279
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 280 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGIS-PERMMVADV 338
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 339 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLR-ERTPARDY 396
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRR------------------ 650
LFG PL+ + + LS A I + +L + R
Sbjct: 397 NSSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDLEDKD 456
Query: 651 --------TYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
T S++ G ++ G V+ + S + R+ F L +
Sbjct: 457 SLPKPGHVTEGSSQDPGLEQAGPSSRVVSGSRAPVDNSPGPSHWPQRARRKHLFTLHTVN 516
Query: 703 ERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQ 760
+S + +D+ +P + +DW ++ + Y + V H G+ +KK
Sbjct: 517 SNGTSDRSTFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA-- 570
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++
Sbjct: 571 -PVQLQECIELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKF 629
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+ KLDT V FPI +LD S+++ +S Y YDL A+SNHYGGL GHYT +A
Sbjct: 630 SREKLDTLVEFPIRDLDFSEFVIKPQNDSARELYKYDLIAVSNHYGGLRDGHYTTFA 686
>gi|348515173|ref|XP_003445114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Oreochromis
niloticus]
Length = 1002
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/625 (38%), Positives = 350/625 (56%), Gaps = 70/625 (11%)
Query: 10 MMENGGSCLPCTPDEER-QIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSI 68
M E G + L D +R ++ LK Q L++G+ ++L+ + W++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRGEVATLLKTQ----LRKGDTWYLVDSHWFKQWKKYVGFD---- 48
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQ 128
S+D M + PGP+DNS +++ +GD L ++ +L + DY+LVP +
Sbjct: 49 ---SWDKYQM----GDQNVYPGPVDNSGLLK------DGDVLAIKEHLIDELDYILVPTE 95
Query: 129 VWEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKA 184
W KL WY +G + RK++ +G+ V +VEV+ LKL + + + + KA
Sbjct: 96 GWNKLVSWYGLTEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCEDSNMDNVITKRFSKA 155
Query: 185 STRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQ 242
T + EK + KL I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 156 DTIDMIEKEMRKLFSIPDEKETRLWNRY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQK 214
Query: 243 VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMD 302
++G T G N + Y Y S
Sbjct: 215 NEDG----------------------TWPRGSTAPNVKNSSYSLPSYHPYS--------- 243
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
+ YD + +++ E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y+DE+N +NP
Sbjct: 244 NSYDYSDQSRQSERSGLCGLSNLGNTCFMNSAVQCLSNTPPLTEYFLKDKYTDELNEDNP 303
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+A A+ +L+++LWS + V PR FK ++ RFAPQFSGY Q DS ELLAFLLDG
Sbjct: 304 LGMKGEIARAYAELIKQLWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDG 363
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCPVC
Sbjct: 364 LHEDLNRIRKKPYIQLKDANGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVC 423
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SKVS+TFDPF YLTLPLP RT+ V + + P + +T+ K G DL +LS
Sbjct: 424 SKVSVTFDPFCYLTLPLPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYISDLCTSLSN 483
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI--KDDEHIVAYRFDRKQGGKIKLEIV 599
+ E +++ ++YNH+ R F E +SSI +DD ++ +R + + I
Sbjct: 484 LSGVPA-EKMIVTDIYNHRFHRIFAT-NENLSSIMERDDIYVFEVAVNRVEDTD-HVVIP 540
Query: 600 NRWQEKSASDYLKGSERKLFGAPLV 624
+EK + LFG P +
Sbjct: 541 VHLREKYKQSGYNHTSTPLFGQPFL 565
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
Query: 727 LDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
LDW ++ + Y D + ++D K ++ L C++ F T+E LG +D WY
Sbjct: 726 LDWEPEIKKKYFDETVVEDFD--KHESMEYKPQKKAFFKLKDCIELFTTKEKLGAEDPWY 783
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK 845
CP CK+H+QATKKLDLW LP VLV HLKRFSYSRY+++KLD+ V+FP+ +LD+S+++ +
Sbjct: 784 CPNCKQHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDSLVDFPLRDLDMSEFLINP 843
Query: 846 DGESYVYDLFAISN 859
+ YDL A+SN
Sbjct: 844 NAGPCRYDLIAVSN 857
>gi|126339080|ref|XP_001363326.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Monodelphis domestica]
Length = 954
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 341/593 (57%), Gaps = 59/593 (9%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQMLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y +T+ + YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSY------TTYKN----YDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALST + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMDENLN 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
S + +DD ++ +R + + + V ++ + Y S LFG P +
Sbjct: 513 SIMERDDIYVFEITINRTEDTEQVIIPVCLREKYRHTGYSHHSGSSLFGQPFL 565
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 721 LALDWDPELKKRYFDDNAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 778
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 779 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLI 838
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 839 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 869
>gi|255566191|ref|XP_002524083.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223536651|gb|EEF38293.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 506
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 306/470 (65%), Gaps = 10/470 (2%)
Query: 412 QELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQ 471
QE LAFLLDGLHEDLNRVK KPY E KD+ PD EVA++ W+NH ARNDS+IVD+ QGQ
Sbjct: 2 QEFLAFLLDGLHEDLNRVKCKPYTEAKDTDDHPDNEVADDYWQNHLARNDSIIVDLCQGQ 61
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
Y+STLVCP+C K S+TFDPFMYL+LPLPST RTMT+T+ +GS LP P TVT+ K G
Sbjct: 62 YRSTLVCPMCKKKSVTFDPFMYLSLPLPSTTMRTMTLTLLSTDGSTLPSPITVTVPKCGR 121
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG 591
KDL+ ALS+ C L+ DE LL+AE+Y ++IFRF E P++ ++ I+DD+ +VAYR +
Sbjct: 122 LKDLLDALSSECPLRNDETLLVAEIYRNKIFRFLEEPSDSLALIRDDDKLVAYRLPKDNE 181
Query: 592 GKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
+ + ++ +K + KLFG PLV + +G+ + K+L+P
Sbjct: 182 ASLLVVFLHELLDKPSGLESAAPNWKLFGIPLVARF-SDLCNGSKLRKQYLKVLNPFLMP 240
Query: 652 YSSAKAHGGKENGFLPEVIDELSN------SHNESVETAELEDLCSRELSFQLSLTDERI 705
+ + G +++ S N + E +D FQ+++T+
Sbjct: 241 ADDDILNDYDDLGITANDDSAMADIPSPTVSENNAGSDGETDDDSLFSSEFQINMTNLGE 300
Query: 706 SSCKPIQKDS-ILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
S+ + K S I K K +V + W+ + E YD + LP V K ++ QE++S
Sbjct: 301 SAEIQMSKPSPIPKFNKRFEVYVSWSKKMIEKYDTCILSSLPEVFKPQLYTRRP-QESVS 359
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L+ CL+AFL EEPLGP+DMW+CP CK+HRQA+KKLDLW LP++LV HLKRFSYSR +KNK
Sbjct: 360 LYKCLEAFLKEEPLGPEDMWFCPACKKHRQASKKLDLWRLPEILVVHLKRFSYSRVIKNK 419
Query: 825 LDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYA 873
L+T V+FP+ + DLS Y+ KDG+ SY Y+L+AISNHYGG+GGGHYTA+
Sbjct: 420 LETHVDFPVEDFDLSTYISRKDGQFSYRYELYAISNHYGGMGGGHYTAFV 469
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 252/648 (38%), Positives = 359/648 (55%), Gaps = 47/648 (7%)
Query: 19 PCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHM 78
P T +++ I LK L++G+ ++LI +RW++ W++YV FDS M
Sbjct: 28 PSTESQKQTIGSLLKTA----LRKGDEWYLIDSRWFKQWKKYV----------GFDSWDM 73
Query: 79 NGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK 138
V +R PGPIDNS + S+ D ++ +L + DYVLVP + W KL WY
Sbjct: 74 YNVG-ERNLYPGPIDNSGLF------SDQDTQALKEHLIDELDYVLVPTEAWNKLISWYS 126
Query: 139 ---GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G + RK+I G+ V +VEV+ L L L ++ + V R KA T EK
Sbjct: 127 CLDGQRPIVRKVIEHGMFVKHCKVEVYLLELNLCENNNMDIAVTRYFSKADTIDTIEKEM 186
Query: 195 K-LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI----- 247
+ L I EK R+W+ + + L+ D T+ DA L Q +++E + ++G
Sbjct: 187 RTLFKIPAEKETRLWNKY-MSNTYEQLNKPDSTVQDAGLFHGQVLVIEQKNEDGTWPRQA 245
Query: 248 -SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH---TTGYRFNQYPGSSFGSTFMDMDD 303
S+ P SS + + ++NG + GY N SS GS +
Sbjct: 246 SHSKSSAASSRNFTTSPKLSSNSASISSTVTNGDNCCSPGYTLNN--SSSSGSRLGEYSS 303
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
SY+ + GL GL NLGNTCFMNSALQCL + L +YFL D Y EIN ENPL
Sbjct: 304 YSSSYSYRESQSHPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPL 363
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A A+ DL++++W S + VAPR+FK ++ RFAPQFSGY Q DSQELLAFLLDGL
Sbjct: 364 GMRGEIAEAYADLVKQMWLSRSSYVAPRSFKTQVGRFAPQFSGYQQQDSQELLAFLLDGL 423
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+ ++D+ GRPDE VA E W NH+ RNDS+IVD+F G +KSTLVCP CS
Sbjct: 424 HEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECS 483
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVS+TFDPF YLTLPLP RT+ V + ++ P + V + K G DL AL+
Sbjct: 484 KVSVTFDPFCYLTLPLPMKKDRTLEVFLVRSDPQSRPTQYRVVVPKLGTVTDLCCALTKL 543
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRW 602
C + E +++A+VYNH+ + + + ++ I + + I Y + G ++ L + R
Sbjct: 544 CGV-APENMMVADVYNHRFHKIYRR-DDGLNQIMEKDDIFVYEVQEEDGERMNLPVYFR- 600
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
E+ + + LFG PL+ + + +L D+ K+L + R
Sbjct: 601 -ERHSKHIGSSTSTVLFGQPLLITVPKHNLIA---DVLYDKILERIGR 644
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 134/233 (57%), Gaps = 16/233 (6%)
Query: 658 HGGKENGFLPEVIDELSNSHNESVETAELED--------LCSRELS-FQLSLTDE----R 704
+ G+E +V E N H+E E ++LE+ CS F S+ +
Sbjct: 711 YDGEEEAMDHQVSPEPENGHSEEEEASDLENGSKADAIKPCSPPAKLFTFSVVNSYGTAN 770
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
ISS P + +L+ H V +DW + +L+ + H++ +K ++ ++
Sbjct: 771 ISSL-PCDGN-VLQLNPHSTVAIDWDTESKKLHYDEQEAEAYEKHESMLQPQK-KKATVA 827
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++K
Sbjct: 828 LKECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDK 887
Query: 825 LDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
LDT V+FPI +L++S+++ Y+YDL A+SNHYGG+GGGHYTAY K A
Sbjct: 888 LDTVVDFPIRDLNMSEFVCDPKASPYIYDLIAVSNHYGGMGGGHYTAYGKNKA 940
>gi|417412856|gb|JAA52787.1| Putative ubiquitin carboxyl-terminal hydrolase 11, partial
[Desmodus rotundus]
Length = 833
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/597 (39%), Positives = 327/597 (54%), Gaps = 51/597 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 175 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLV 234
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 235 KQAWSGHHRSIVPNVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 294
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 295 LCDAAGRPDHEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 354
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 355 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVS-PERMMVADV 413
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG------GKIKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y + + L I R + A DY
Sbjct: 414 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRSSISENTREDVVLPIYLR-ERTPARDY 471
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS-GADIDIAVSKLLSPLRRTYSS-------------- 654
LFG PL+ + + LS A I + +L + R S
Sbjct: 472 NNSYYGLMLFGHPLLVSVPRDRLSWDALYHILLYRLSRYVTRPSSDDEDDGDEKDMEGKN 531
Query: 655 -----AKAHGGKENGFLPEVIDELSNSH-------NESVETAELEDLCSRELSFQLSLTD 702
GG + PE S N S + R+ F L +
Sbjct: 532 SIPKPGNVAGGSSHNSGPEQAGPSSGVAGGSRAPVNNSPGPSHWPQRARRKHLFTLQTVN 591
Query: 703 ERISSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQ 760
+S + +D+ +P + +DW ++ + Y + V H G+ +KK
Sbjct: 592 SNGTSDRSNFNEDTHAQP----YIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA-- 645
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLW LP+ L+ HLKRFSY+++
Sbjct: 646 -PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWTLPETLIIHLKRFSYTKF 704
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+ KLDT V FPI +LD S+++ ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 705 SREKLDTLVEFPIRDLDFSEFVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 761
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 25/92 (27%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNG-NGSS 105
FL+ WY+ WE +V G + D+ +F PG I+N+ + ++ NG
Sbjct: 11 FLVERHWYKLWEVHVQGGDQ--DSSTF---------------PGCINNAKLFEDEVNG-- 51
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
++ L EG+DY L+P W WY
Sbjct: 52 -----HLKEGLVEGEDYALLPAAAWHYPVSWY 78
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/649 (39%), Positives = 365/649 (56%), Gaps = 49/649 (7%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP E Q Q + + LK+G+ +FLI +RW++ W++YV FDS M
Sbjct: 27 TPSSESQ-KQTIGSLLKTPLKKGDEWFLIDSRWFKQWKKYV----------GFDSWDMYN 75
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY--- 137
V +R+ PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY
Sbjct: 76 VG-ERSLYPGPIDNSGLF------SDQETQALKEHLIDELDYVLVPTEAWNKLVSWYGCL 128
Query: 138 KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK- 195
+G + RK++ G+ V +VEV+ L L L ++ + V R KA T EK +
Sbjct: 129 EGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTIDTIEKEMRT 188
Query: 196 LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGN 254
L I EK R+W+ + + L+ D T+ DA L Q +++E + ++G +
Sbjct: 189 LFEIPSEKETRLWNKY-MSNTYEQLNKPDSTVQDAGLFQGQVLVIERRNEDGTWPRQASH 247
Query: 255 DLALVPIEPSRSSLT---------IAGGPALSNGHTT---GYRFNQYPGSSFGSTFMDMD 302
+ PSR+ T ++ P +NG ++ GY N S+ S +
Sbjct: 248 PKS--STTPSRNFSTSPKLSSNSSMSISPTATNGDSSCSPGYTLNN--SSTSSSNRLGSY 303
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
+ Y+SY+ + + GL GL NLGNTCFMNSALQCL + P L +YFL D Y EIN ENP
Sbjct: 304 NSYNSYSYRESQAQPGLCGLSNLGNTCFMNSALQCLSNAPPLTEYFLDDQYEAEINRENP 363
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+A A+ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDG
Sbjct: 364 LGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDG 423
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNRVK+KPY+ ++D+ GR DE VA E WKNH+ RNDS+IVD+F G +KSTLVCPVC
Sbjct: 424 LHEDLNRVKKKPYLALRDAEGREDEIVAKEAWKNHRLRNDSVIVDIFHGLFKSTLVCPVC 483
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
SKVS+TFDPF YLTLPLP RTM V + ++ P + + K G DL ALS
Sbjct: 484 SKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSKPTQYRAVVPKLGTVADLCSALSK 543
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
C + E +++A+VYNH+ + + + ++ I + + I Y + ++ L + R
Sbjct: 544 LCGIP-PENMVVADVYNHRFHKIYRR-DDGLNQIMEKDDIFVYEVQEEDSERMNLPVYLR 601
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
E+ + S LFG PL+ + +L+ D+ K+L + R
Sbjct: 602 --ERQSKHAASSSSTLLFGQPLLITVPRHNLTA---DVLYDKILERIGR 645
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
++LK H + +DW + +L+ + H++ +K ++ ++L C++ F T
Sbjct: 776 NVLKLNPHSTIAIDWDTESKKLFYDEQEAEAYEKHESMLQPQK-KKTTVALRDCIELFTT 834
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V+FPI
Sbjct: 835 METLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIR 894
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+L++S+++ Y+YDL A+SNHYGG+GGGHYTAYAK
Sbjct: 895 DLNMSEFVCDPKASPYIYDLIAVSNHYGGMGGGHYTAYAK 934
>gi|395537795|ref|XP_003770875.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Sarcophilus harrisii]
Length = 954
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/593 (38%), Positives = 337/593 (56%), Gaps = 59/593 (9%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQMLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALST + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMDENLN 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
S + +DD ++ +R + + + V ++ + Y S LFG P +
Sbjct: 513 SIMERDDIYVFEITINRTEDTEQVIIPVCLREKYRHTGYSHHSGSSLFGQPFL 565
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 721 LALDWDPELKKRYFDDNAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 778
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 779 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLI 838
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 839 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 869
>gi|74228797|dbj|BAE21887.1| unnamed protein product [Mus musculus]
Length = 952
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/623 (37%), Positives = 348/623 (55%), Gaps = 66/623 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLV 624
++ S Y + LFG P +
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFL 565
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 720 LALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDP 777
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 778 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLI 837
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 838 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|28972259|dbj|BAC65583.1| mKIAA0529 protein [Mus musculus]
gi|148692494|gb|EDL24441.1| ubiquitin specific peptidase 15, isoform CRA_c [Mus musculus]
Length = 955
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/623 (37%), Positives = 348/623 (55%), Gaps = 66/623 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 4 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 51
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 52 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 99
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 100 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 159
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 160 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 218
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 219 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 246
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 247 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 306
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 307 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 366
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 367 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 426
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 427 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 486
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 487 SGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVIPVCL 545
Query: 602 WQEKSASDYLKGSERKLFGAPLV 624
++ S Y + LFG P +
Sbjct: 546 REKFRHSSYTHHTGSSLFGQPFL 568
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 723 LALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDP 780
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 781 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLI 840
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 841 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 871
>gi|355727895|gb|AES09346.1| ubiquitin specific peptidase 11 [Mustela putorius furo]
Length = 747
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 275/829 (33%), Positives = 412/829 (49%), Gaps = 125/829 (15%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
FL+ WY+ WE YV G + D+ +F PG I+N+D+ ++
Sbjct: 1 FLVVRHWYKQWEAYVQGGDK--DSGTF---------------PGCINNADLFEDQV---- 39
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFXL 163
+ +R+ L EG+DYVL+P W L WY G P + RK++ + + ++VEV+ +
Sbjct: 40 --NWHLRKGLVEGEDYVLLPAAAWHYLVDWYGLEHGQPPIERKVVE--LPSVQKVEVYPV 95
Query: 164 CLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI--EQEKARIWDYFNKQRSTSPLDV 221
L L D T + + L + + + + QE+ R+W N + S L
Sbjct: 96 ELLLARHSDMDTTHTAQFSRTDSVDLVLRTAREQFLVSPQEETRLW-IKNAEGSFERLCN 154
Query: 222 SDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHT 281
+ T+ DA L+ Q +++E + +G PS +
Sbjct: 155 TRVTVLDAALKTGQVVIMETRNKDGTW--------------PSAQPQAV----------- 189
Query: 282 TGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHT 341
+T ++ D+ + + G+ GL NLGNTCFMNSALQCL +
Sbjct: 190 --------------NTALEEDENFQG--------QPGICGLTNLGNTCFMNSALQCLSNV 227
Query: 342 PDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
P L +YFL + Y +E+N NPLGM GE+A A+ DL+++ WS ++ P FK K+ FA
Sbjct: 228 PQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFA 287
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ D+ GRPD+EVA E W+NHK RN
Sbjct: 288 SQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRN 347
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPM 520
DS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP + R M V + P
Sbjct: 348 DSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSHKRVMEVFFVSMDPRRKPE 407
Query: 521 PFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEH 580
+ + K G DL +AL+ + E +++A+V++H+ ++ ++ E +SSI D +
Sbjct: 408 QHRLVVPKKGKISDLCVALAKHTGMS-PERMMVADVFSHRFYKIYQL-EESLSSILDRDD 465
Query: 581 IVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDYLKGSE-RKLFGAPLVTYLEEEHLS 633
I Y R G+ + L I R + A DY LFG PL+ + + LS
Sbjct: 466 IFIYEVSGRSAIGENTREDVVLPIYLR-ERTPARDYNNSYYGLMLFGHPLLVSVPRDRLS 524
Query: 634 -GADIDIAVSKLLSPLRRTYS--------------------------SAKAHGGKENGFL 666
A I + +L + R S S++ G ++ G
Sbjct: 525 WDALYHILLYRLSRYVTRPSSDDEDDGDEKDMEDKDNIPKPGHVAGGSSQDSGPEQAGPS 584
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP-IQKDSILKPGKHIKV 725
V + S + R+ F L + +S + +D+ +P +
Sbjct: 585 SGVAGGSRAPVDSSPGPSHWPQRARRKHLFTLQTVNSNGTSDRSTFNEDTHAQP----YI 640
Query: 726 LLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+DW ++ + Y + V H G+ +KK + L C++ F T E L ++ W
Sbjct: 641 AIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVRLQECIELFTTVETLEKENPW 697
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
YCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++ + KLDT V FPI
Sbjct: 698 YCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPI 746
>gi|90075590|dbj|BAE87475.1| unnamed protein product [Macaca fascicularis]
Length = 812
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 273/848 (32%), Positives = 422/848 (49%), Gaps = 121/848 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 32 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 84
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 85 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 127
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQT-VIRLSKKASTRQLYEKV 193
G P + RK+I + N ++VEV+ + L L+ D S++ ++ S S +
Sbjct: 128 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLSRSHTVQFSHTDSIGMVLRTA 185
Query: 194 CKLRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ +E QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 186 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 239
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + M + + +
Sbjct: 240 ------------------------------------WPSAQLHVMNKHMSEEDEDF---- 259
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 260 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 318
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 319 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 378
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 379 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 438
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 439 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 497
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS- 606
++A+V++H+ ++ ++ E +SSI D + I Y R + +G + + + +E++
Sbjct: 498 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTP 556
Query: 607 ASDYLKGSE-RKLFGAPLVTYLEEEHLSGADI-DIAVSKLLSPLRRTYSS---------- 654
A DY LFG PL+ + + + + ++ + +L + + S
Sbjct: 557 ARDYNNSYYGLMLFGHPLLVSVPRDRFTWEGLYNVLMYRLSRYVSKPNSDDEDDGDEKED 616
Query: 655 ---------AKAHGGKENGFLPEVIDELSNSHNE-------SVETAELEDLCSRELSFQL 698
+ GG PE S N + T++ R+ F L
Sbjct: 617 DEEDKDDVPGPSTGGSLRDPEPEQAGPSSGVTNRCPFLLDNCLGTSQWPPRRRRKQLFTL 676
Query: 699 SLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKK 757
+ +S + + + + +DW ++ + Y + V H G+ +KK
Sbjct: 677 QTVNSNGTSDRTTSPEEV---HAQPYIAIDWEPEMKKRYYDEIEAEGYVKHDCVGYVMKK 733
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ L C++ F T E L ++ WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY
Sbjct: 734 A---PVRLQECIELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSY 790
Query: 818 SRYLKNKL 825
+++ + KL
Sbjct: 791 TKFSREKL 798
>gi|351696731|gb|EHA99649.1| Ubiquitin carboxyl-terminal hydrolase 15 [Heterocephalus glaber]
Length = 899
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 284/898 (31%), Positives = 439/898 (48%), Gaps = 169/898 (18%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PR
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPR-- 331
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
AF + VA E
Sbjct: 332 -----------------------AFKV----------------------------VAEEA 340
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 341 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 400
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 401 MDPLIKPMQYKVVVPKIGNILDLCTALSGLSGVPADK-MIVTDIYNHRFHRIFAVDENLS 459
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEH 631
S + +DD ++ +R + + + V ++ S Y + LFG P + + +
Sbjct: 460 SIMERDDIYVFEININRTEDTENVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRNN 519
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKE-------NGFLPEVIDE--------LSNS 676
++ + ++ ++ + + + G NG P I E
Sbjct: 520 TEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMETDEP 579
Query: 677 HNESVETAEL---------ED-----------LCSRE-------------LSFQLS-LTD 702
+ES + EL ED LC+ E +FQ + L +
Sbjct: 580 DDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETCKGQLTGHKKRLFTFQFNNLGN 639
Query: 703 ERISSCKPIQK-----DSILKPGKHIKVLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVK 756
I+ K + D L+ + + LDW ++ + Y D + +D + K
Sbjct: 640 TDINYIKDDIRHIRFDDRQLRLDERSFLALDWDPELKKRYFDENAAEDFEKHESVEY--K 697
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
++ + L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFS
Sbjct: 698 PPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFS 757
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
YSRY+++KLDT V+FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 758 YSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 815
>gi|47229603|emb|CAG06799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1107
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 257/662 (38%), Positives = 356/662 (53%), Gaps = 50/662 (7%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP E Q Q + + L++G+ ++LI +RW++ W++YV FDS M
Sbjct: 26 TPSTESQ-KQTIGSLLKTSLRKGDEWYLIDSRWFKQWKKYV----------GFDSWDMYN 74
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-- 138
V +R PGPIDNS + S + D ++ +L + DYVLVP + W KL WY
Sbjct: 75 VG-ERNLYPGPIDNSGLF-----SEDQDTQALKEHLIDELDYVLVPTEAWNKLVSWYSCL 128
Query: 139 -GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK- 195
G + RK+I G+ V +VEV+ L L L ++ + V R KA T EK +
Sbjct: 129 DGQRPIVRKVIEHGMFVKHCKVEVYLLELNLCENNNMDIAVTRYFSKADTIDTIEKEMRT 188
Query: 196 LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG------IS 248
L I EK R+W+ + + L+ D T+ DA L Q +++E + ++G
Sbjct: 189 LFKIPAEKETRLWNKY-MSNTYEQLNKPDSTVQDAGLFHGQVLVIEQKNEDGSWPRQASH 247
Query: 249 MDSTGNDLALVPIEPSRSSLTIAGGPALSNGH---TTGYRFNQYPGSSFGSTFMDMDDGY 305
S+ P SS + ++NG + GY N SS S
Sbjct: 248 SKSSSASSRNFTTSPKLSSNSTGISSTVTNGDNCCSPGYALNN-STSSGSSRLGGYSSYS 306
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
SYN + + GL GL NLGNTCFMNSALQCL + L +YFL D Y EIN ENPLGM
Sbjct: 307 SSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGM 366
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
GE+A A+ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHE
Sbjct: 367 RGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE 426
Query: 425 DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
DLNRVK+KPY+ ++D+ GRPDE VA E W NH+ RNDS+IVD+F G +KSTLVCP CSKV
Sbjct: 427 DLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPECSKV 486
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
S+TFDPF YLTLPLP RTM V + ++ P + V + K G DL ALS C
Sbjct: 487 SVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGAVTDLCYALSKLCG 546
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIV---------AYRFDRKQGGKIK 595
+ E +++A+VYNH+ + + L ++ D+ V R R G ++
Sbjct: 547 VA-PENMMVADVYNHRFHKIYRRDDGLNQIMEKDDIFVWVFTKSSTTRTRCRRMDGERMN 605
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA 655
L + R E+ + LFG PL+ + + +L D+ K+L + R A
Sbjct: 606 LPVYFR--ERHNKHVGSSTSTVLFGQPLLITVPKHNLIA---DVLYDKILERIGRYVKRA 660
Query: 656 KA 657
++
Sbjct: 661 QS 662
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 715 SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
+IL+ H V +DW + +L+ + H++ +K ++ ++L C++ F T
Sbjct: 813 NILQLNPHSTVAIDWDTESKKLHYDEQEAEAYEKHESMLQPQK-KKATVALKECIELFTT 871
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPIL 834
E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V+FPI
Sbjct: 872 METLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIR 931
Query: 835 NLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
+L++S+++ + Y+YDL A+SNHYGG+GGGHYTAY K A
Sbjct: 932 DLNMSEFVCNPKASPYIYDLIAVSNHYGGMGGGHYTAYCKNKA 974
>gi|328872047|gb|EGG20417.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 1393
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/587 (39%), Positives = 327/587 (55%), Gaps = 56/587 (9%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G+AGL NLGNTCFMNS+LQCL + L +Y L + + +++N +NPLG +G+LA + +
Sbjct: 651 RPGIAGLDNLGNTCFMNSSLQCLSNAIPLTRYLLNEKHLEDLNVDNPLGCNGDLAKEYAN 710
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L++++W +V PR FK + RFAPQF GY QHDSQELLAFLLDGLHED+N+VK+KP+
Sbjct: 711 LIKQIWKGDMTSVGPRNFKTAIERFAPQFMGYQQHDSQELLAFLLDGLHEDMNQVKKKPF 770
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
E KD GR DE +ANE W+ H+ARN S+IVD FQ Q KS L+CP C +SITFDPFMYL
Sbjct: 771 FEGKDYDGRADEIIANEQWEMHRARNKSIIVDWFQAQLKSKLICPECENISITFDPFMYL 830
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
+LPLP + + M+V NG+ LP ++ L K ++L+ L+ + L
Sbjct: 831 SLPLPVNIRKIMSVVYVPYNGNALPTQHSIELNKSSTVQELLEKLAAEPNVAPISHLFAT 890
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDY-LKG 613
N+QI + + P + SI + + IV Y R I I +++ K +++ +K
Sbjct: 891 SQSNNQINKHLK-PTGTLDSIHNRDPIVVYVNHR-----INRLIYEQYELKDPANHTIKV 944
Query: 614 SERKLFGA--PLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGG--KENGFLPEV 669
+ + + + P V + + ++L S + + GG KE + E+
Sbjct: 945 TMKTGYHSHFPFV------------LSVPFAELTSVEDLYFHIQERLGGLLKEQDRIKEI 992
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQ------------KDSIL 717
D S+ + +E E+ S RI+ KP + KDS++
Sbjct: 993 FD----SNQKPIENEPSEEEEDNSYSGYRPYNYNRINHQKPARDPRFIFQMTVDNKDSMM 1048
Query: 718 KPGKHIK--------VLLDW---TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
P K + L W T D H +D +++ F ++ I L
Sbjct: 1049 APPKKFAFDPINFDMITLHWEGQTFDRH--FDAGQLEN---SQYNTFHRDIASEKEIELK 1103
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
+C+D F + E LG +D WYC +CK H+QATKK D+W P +LV HLKRFSY + + KLD
Sbjct: 1104 TCIDLFTSTEKLGAEDPWYCSKCKVHQQATKKFDIWSAPPILVIHLKRFSYKKAWREKLD 1163
Query: 827 TFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
T V FPI +LDLS ++ S VYDLFA+SNHYG +GGGHYTAYA
Sbjct: 1164 TLVRFPIKDLDLSSHVLSPSDSPPVYDLFAVSNHYGSMGGGHYTAYA 1210
>gi|74220030|dbj|BAE40593.1| unnamed protein product [Mus musculus]
Length = 952
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/623 (37%), Positives = 347/623 (55%), Gaps = 66/623 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +V V+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVGVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSTPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVIPVCL 542
Query: 602 WQEKSASDYLKGSERKLFGAPLV 624
++ S Y + LFG P +
Sbjct: 543 REKFRHSSYTHHTGSSLFGQPFL 565
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 720 LALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDP 777
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 778 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLI 837
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 838 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|327272916|ref|XP_003221230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 2
[Anolis carolinensis]
Length = 953
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 336/593 (56%), Gaps = 59/593 (9%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY + + RK++ +G+ V
Sbjct: 73 DGDCQS------LKEHLIDELDYILLPTEGWNKLVSWYTLLESQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQRNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSAPNVKNSNYCLPSYTAYK----------NYDYSEPGRHNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP R++ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G +DL ALST + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLAKPMQYKVVVPKIGNIQDLCTALSTLSGVAADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
S + +DD ++ +R + + + V ++ S Y S FG P +
Sbjct: 513 SIMERDDIYVFEIGINRTEDTEQVVIPVCLREKFRHSGYSHHSGSTHFGQPFL 565
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 89/112 (79%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY++
Sbjct: 757 VKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMR 816
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+KLDT V FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 817 DKLDTLVEFPITDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 360/653 (55%), Gaps = 55/653 (8%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
+P T +++ I LK L++G+ ++LI +RW++ W++YV FDS
Sbjct: 26 VPSTESQKQSIGTLLKTL----LRKGDEWYLIDSRWFKQWKKYV----------GFDSWD 71
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+ V PGPIDNS + + S ++ +L + DYVLVP + W KL WY
Sbjct: 72 LYNVGEHNL-YPGPIDNSGLFSDRKSQS------LKEHLIDELDYVLVPTEAWNKLVSWY 124
Query: 138 KG-GPALP--RKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV 193
G P RK++ G+ V +VEV+ L L L ++ + + V R KA T EK
Sbjct: 125 GSLGNQKPIIRKVVEHGMFVKHCKVEVYLLELNLCENDNMDKVVTRHFSKADTIDTIEKE 184
Query: 194 CK-LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI---- 247
+ L I EK R+W+ + + L+ D T+ DA L Q +++E + ++G
Sbjct: 185 MRSLFDIPSEKETRLWNKY-MSNTYEQLNKLDSTVQDAGLFQGQVLVIEKKNEDGTWPRQ 243
Query: 248 -----SMDSTGNDLALVP----IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF 298
S ST + P + S TI G + SN +GY N S+ G+
Sbjct: 244 SCHSKSSTSTSRNYTTSPKPSSNSSATISSTITNGDSNSN---SGYMLNN---STSGNRL 297
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEIN 357
+ SY+ + + GL GL NLGNTCFMNSALQCL +TP L +YFL D Y EIN
Sbjct: 298 GSYNSYSSSYSYRESAAQPGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEIN 357
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
ENPLGM GE+A A+ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAF
Sbjct: 358 RENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAF 417
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
LLDGLHEDLNRVK+KPY+ ++D+ GRPDE VA E W NH+ RNDS+IVD+F G +KSTLV
Sbjct: 418 LLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLV 477
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP CSKVS+TFDPF YLTLPLP RTM V + + M F V + K G DL
Sbjct: 478 CPECSKVSVTFDPFCYLTLPLPMKKDRTMEVYLVRTDPQFRAMQFRVVVPKMGAVADLCS 537
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLE 597
AL+ + E +++A+VYNH+ + ++ + ++ I + + I Y + ++ L
Sbjct: 538 ALAKLSGVP-SENMVVADVYNHRFHKIYKR-DDGLNQIMEKDDIFVYEVLEEDSERMNLP 595
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
+ R E+ A S LFG PL+ + +L+ +D ++L + R
Sbjct: 596 VYFR--ERHAKHSGGSSGTMLFGQPLLITVPRLNLT---VDTLYERVLERIGR 643
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 109/168 (64%), Gaps = 11/168 (6%)
Query: 715 SILKPGKHIKVLLDWTDDVHEL-YD----PSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
++LK H V +DW D L YD +Y K ++H + ++ ++L C+
Sbjct: 787 NLLKLTTHSTVAIDWDSDTKRLCYDDQEAEAYDKHESMLHA------QKKKTTVALRECI 840
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V
Sbjct: 841 ELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVV 900
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
+FPI +L++S+++ + Y+YDL A+SNHYGG+GGGHYTAY K A
Sbjct: 901 DFPIRDLNMSEFVCDPKADPYIYDLIAVSNHYGGMGGGHYTAYGKNKA 948
>gi|326911482|ref|XP_003202087.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 1
[Meleagris gallopavo]
Length = 981
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/595 (38%), Positives = 347/595 (58%), Gaps = 36/595 (6%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAG- 272
+ PL+ D T+ DA L Q +++E + ++G T + P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGSSTPKSPGASNFSTLPK 240
Query: 273 -GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
P+LSN + N + S++ + YD + E+ GL GL NLGNTCFM
Sbjct: 241 ISPSLSNNYNNMNNRNVKNSNYCLSSYTAYKN-YDYSEPGRHNEQPGLCGLSNLGNTCFM 299
Query: 332 NSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PR
Sbjct: 300 NSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPR 359
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
AFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA
Sbjct: 360 AFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAE 419
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 420 EAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVFL 479
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE 570
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 480 VRMDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIFAMDEN 538
Query: 571 LISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L S + +DD ++ +R + + ++ I +EK S LFG P +
Sbjct: 539 LSSIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSSLFGQPFL 592
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D S +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 LALDWDPELKKRYFDDSAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 805
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V FPI +LD+S+++
Sbjct: 806 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFLI 865
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 896
>gi|74149555|dbj|BAE36413.1| unnamed protein product [Mus musculus]
Length = 981
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/627 (37%), Positives = 359/627 (57%), Gaps = 45/627 (7%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TMDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVI 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLV 624
V ++ S Y + LFG P +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFL 594
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 749 LALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDP 806
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 807 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLI 866
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 867 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|395537793|ref|XP_003770874.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Sarcophilus harrisii]
Length = 983
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/597 (38%), Positives = 348/597 (58%), Gaps = 38/597 (6%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQMLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF-MDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTC 329
P +S + N + S + + Y +Y+ ++ G E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALST + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L S + +DD ++ +R + + + V ++ + Y S LFG P +
Sbjct: 538 ENLNSIMERDDIYVFEITINRTEDTEQVIIPVCLREKYRHTGYSHHSGSSLFGQPFL 594
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 750 LALDWDPELKKRYFDDNAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 807
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 808 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLI 867
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 868 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 898
>gi|414588302|tpg|DAA38873.1| TPA: hypothetical protein ZEAMMB73_967629 [Zea mays]
Length = 467
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/426 (53%), Positives = 273/426 (64%), Gaps = 24/426 (5%)
Query: 133 LFCWYKGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYE 191
L Y GGP LPRK I+ G + +EV+ L L+LI +T IR+SKK
Sbjct: 62 LVVGYGGGPTLPRKAINTGFSQTDLAIEVYPLRLQLILMSRGERTFIRISKK-------- 113
Query: 192 KVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS 251
VC IWDY+ + + S +D D+TLDDA +QMDQ+IL+EV D S+D
Sbjct: 114 -VC-----------IWDYYGRTKH-SLMDSLDKTLDDANIQMDQNILVEVTTDASGSLDG 160
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
+ +S L A +N + Y + P S D+D+ + S
Sbjct: 161 LVKRNNFFESDAPKSGLPDENFAA-NNYASRSYSSSLTPSIYLRSPNGDLDNVHGSSGMI 219
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALA 371
+G GL GL NLGNTC+MNSA+QCLVHTP +YF DY EIN +NPLG GELALA
Sbjct: 220 TRGSPLGLTGLLNLGNTCYMNSAIQCLVHTPQFTKYFCEDYHREINRQNPLGNVGELALA 279
Query: 372 FGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
FG+LLRKLW+ GRA V+PR FK KL+RFA QFSGYNQHDSQELLAFLLDGLHEDLNRVK
Sbjct: 280 FGELLRKLWAPGGRAPVSPRPFKMKLSRFASQFSGYNQHDSQELLAFLLDGLHEDLNRVK 339
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+PYI D+ GR DEEVA+E W NH ARN+S+IVDV QGQYKSTLVCPVC KVS+TFDP
Sbjct: 340 HRPYINSGDADGRSDEEVADEYWANHIARNNSIIVDVCQGQYKSTLVCPVCGKVSVTFDP 399
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
FMYL+LPL TR++T VF +GS P PFTV + K G C+DL+ AL AC LK E
Sbjct: 400 FMYLSLPLQFASTRSVTAVVFSCDGSVPPTPFTVNVPKQGRCRDLLQALGAACSLKNGEK 459
Query: 551 LLLAEV 556
LL+AEV
Sbjct: 460 LLIAEV 465
>gi|21489969|ref|NP_081880.2| ubiquitin carboxyl-terminal hydrolase 15 [Mus musculus]
gi|28558361|sp|Q8R5H1.1|UBP15_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; AltName: Full=Ubiquitin
thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|18653399|gb|AAL77418.1|AF468037_1 deubiquitinating enzyme Usp15 [Mus musculus]
gi|74217049|dbj|BAE26626.1| unnamed protein product [Mus musculus]
gi|148692492|gb|EDL24439.1| ubiquitin specific peptidase 15, isoform CRA_a [Mus musculus]
Length = 981
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/627 (37%), Positives = 359/627 (57%), Gaps = 45/627 (7%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLE 597
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R + + +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVI 567
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLV 624
V ++ S Y + LFG P +
Sbjct: 568 PVCLREKFRHSSYTHHTGSSLFGQPFL 594
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 749 LALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDP 806
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 807 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLI 866
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 867 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 897
>gi|126339078|ref|XP_001363243.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 1
[Monodelphis domestica]
Length = 983
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/597 (38%), Positives = 343/597 (57%), Gaps = 38/597 (6%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQMLVIEQKNEDG-----TWPRGPSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTF----MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTC 329
P +S + N + S + YD + E+ GL GL NLGNTC
Sbjct: 239 PKISPSSLSNNYNNINNRNVKNSNYCLPSYTTYKNYDYSEPGRNNEQPGLCGLSNLGNTC 298
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V
Sbjct: 299 FMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVT 358
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ V
Sbjct: 359 PRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 418
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 AEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEV 478
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ + PM + V + K G DL ALST + D+ +++ ++YNH+ R F
Sbjct: 479 YLVRMDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPADK-MIVTDIYNHRFHRIFAMD 537
Query: 569 AELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L S + +DD ++ +R + + + V ++ + Y S LFG P +
Sbjct: 538 ENLNSIMERDDIYVFEITINRTEDTEQVIIPVCLREKYRHTGYSHHSGSSLFGQPFL 594
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 750 LALDWDPELKKRYFDDNAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 807
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 808 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLI 867
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 868 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 898
>gi|53759136|ref|NP_990171.2| ubiquitin carboxyl-terminal hydrolase 15 isoform 1 [Gallus gallus]
Length = 981
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/596 (38%), Positives = 346/596 (58%), Gaps = 38/596 (6%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T + P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG-----TWPRGSSTPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCF 330
P +S + Y + + Y +Y+ ++ G E+ GL GL NLGNTCF
Sbjct: 239 PKISPSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYSEPGRHNEQPGLCGLSNLGNTCF 298
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V P
Sbjct: 299 MNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTP 358
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
RAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA
Sbjct: 359 RAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVA 418
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V
Sbjct: 419 EEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVF 478
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
+ + PM + V + K G DL ALS + D+ +++ ++YNH+ R F
Sbjct: 479 LVRMDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIFAMDE 537
Query: 570 ELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L S + +DD ++ +R + + ++ I +EK S LFG P +
Sbjct: 538 NLSSIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSSLFGQPFL 592
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D S +D + K ++ + L C++ F T+E LG +D
Sbjct: 748 LALDWDPELKKRYFDDSAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 805
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V FPI +LD+S+++
Sbjct: 806 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFLI 865
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 866 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 896
>gi|321460368|gb|EFX71411.1| hypothetical protein DAPPUDRAFT_308900 [Daphnia pulex]
Length = 869
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 236/590 (40%), Positives = 321/590 (54%), Gaps = 79/590 (13%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS LQC+ +TP + +YFL + + E+N ENPLG GE+A AF DLL
Sbjct: 248 GRCGLNNLGNTCFMNSVLQCMSNTPPIQRYFLEERHWAELNKENPLGNQGEIAKAFADLL 307
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ +WS + PRAFK ++ RFAPQFSGY QHDSQELL FLLDGLHEDLNR+ +KPYIE
Sbjct: 308 KAMWSGQHHSFPPRAFKLQVGRFAPQFSGYQQHDSQELLTFLLDGLHEDLNRILKKPYIE 367
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KD+ GR DEEVA E W+N++ RNDS+IVD+F G KSTLVCP C+KVS+TFDP YL+L
Sbjct: 368 LKDADGRSDEEVAREGWENYRKRNDSVIVDLFHGLLKSTLVCPECNKVSVTFDPTCYLSL 427
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P+P R + + + + M + V + K G DL ALS C + D +++A+V
Sbjct: 428 PMPVKKERPVELYLARLDPEVKAMRYRVIVPKMGTILDLTEALSKLCGIPADH-MIVADV 486
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER 616
+ H+ + F N + IS I + + I A
Sbjct: 487 HQHKFHQIFTNESS-ISQISERDVIYA--------------------------------- 512
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNS 676
+FG P + + E G D D +++ ++R + E+ P D ++N
Sbjct: 513 -MFGVPFILQVPRE---GMDYDKLYRLIITRMKRYLKTI-----DEDPAAPTSADAVTNV 563
Query: 677 HNESVETAELEDLCSRELSFQLSLTDE----RISSCKPIQKDS----------------- 715
+ + E E + + E L +E + +P+ S
Sbjct: 564 PSSIPNSCESE-MDTEEADLSLENGNEAHPMETNGIEPVANQSQPKRFFTMDLVNLSGNT 622
Query: 716 ----ILKPGKHIK------VLLDWTDDVHEL-YDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
+ + GK I + +W V E YD +D + V +Q +
Sbjct: 623 SLGKLKQNGKPISLAAKNFLTCEWEPAVKEASYDAEAAEDYNEDASSQQRVNVKKQ-VLQ 681
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L CL+ F + E LG DD WYCP CK+H +ATKK DLW LP+VLV HLKRFSY+R L++K
Sbjct: 682 LKECLEVFTSIERLGADDAWYCPSCKKHVRATKKFDLWSLPEVLVIHLKRFSYTRSLRDK 741
Query: 825 LDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDT V FP L+++ Y+ + VYDL + NHYGGLGGGHYTAYAK
Sbjct: 742 LDTLVEFPTRGLNMAPYIIDPNPMDAVYDLIGVCNHYGGLGGGHYTAYAK 791
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 28/224 (12%)
Query: 29 VQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER 88
V+DL +Q L +G+ ++LI W+ W++Y D+ +DS ++ ++S
Sbjct: 20 VKDLMDQP---LSDGDTWYLIDLHWFNLWKKYAGWDK-------WDSSNVGDLTS----H 65
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA---LPR 145
PG IDNS +++ + E++ +L E D+ LVP+ VW+ L WY+ P + R
Sbjct: 66 PGNIDNSVLMKENSK-------ELKEHLTEDIDFALVPETVWKLLVQWYQLAPGQEPIAR 118
Query: 146 KMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK--LRGIEQE 202
K++ G++ RVE++ LKL + +T ++ K T + EKV + + E
Sbjct: 119 KVVDHGMLTSYLRVEIYLTELKLAKYPEVEKTHLQKFSKRDTLENVEKVLREVFQIPENT 178
Query: 203 KARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG 246
+W + Q + L + Q++ + L +Q ++ EVQ ++G
Sbjct: 179 NIHLWTKSSNQ-TYEELPMKKQSIQELSLMSNQTLVAEVQNEDG 221
>gi|326911484|ref|XP_003202088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 2
[Meleagris gallopavo]
Length = 953
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 336/593 (56%), Gaps = 60/593 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
+ N + Y + Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 SSTPNVKNSNYCLSSYTAYK----------NYDYSEPGRHNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVFLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
S + +DD ++ +R + + ++ I +EK S LFG P +
Sbjct: 513 SIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSSLFGQPFL 564
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D S +D + K ++ + L C++ F T+E LG +D
Sbjct: 720 LALDWDPELKKRYFDDSAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 777
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V FPI +LD+S+++
Sbjct: 778 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFLI 837
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 838 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|327272914|ref|XP_003221229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform 1
[Anolis carolinensis]
Length = 981
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/596 (37%), Positives = 345/596 (57%), Gaps = 37/596 (6%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY + + RK++ +G+ V
Sbjct: 73 DGDCQS------LKEHLIDELDYILLPTEGWNKLVSWYTLLESQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T P P S+ +
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQRNEDG-----TWPRGPSAPKSPGASNFSTL-- 238
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG---EKGGLAGLQNLGNTCF 330
P +S + Y + + Y +Y+ ++ G E+ GL GL NLGNTCF
Sbjct: 239 PKISPSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPGRHNEQPGLCGLSNLGNTCF 298
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V P
Sbjct: 299 MNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTP 358
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
RAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA
Sbjct: 359 RAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVA 418
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP R++ V
Sbjct: 419 EEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVY 478
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
+ + PM + V + K G +DL ALST + D+ +++ ++YNH+ R F
Sbjct: 479 LVRMDPLAKPMQYKVVVPKIGNIQDLCTALSTLSGVAADK-MIVTDIYNHRFHRIFAMDE 537
Query: 570 ELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L S + +DD ++ +R + + + V ++ S Y S FG P +
Sbjct: 538 NLSSIMERDDIYVFEIGINRTEDTEQVVIPVCLREKFRHSGYSHHSGSTHFGQPFL 593
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 89/112 (79%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L C++ F T+E LG +D WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY++
Sbjct: 785 VKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMR 844
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+KLDT V FPI +LD+S+++ + + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 845 DKLDTLVEFPITDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 896
>gi|53759138|ref|NP_997702.1| ubiquitin carboxyl-terminal hydrolase 15 isoform 2 [Gallus gallus]
Length = 953
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 335/593 (56%), Gaps = 60/593 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W +L WY +G + RK++ +G+ V
Sbjct: 73 DGDSQS------LKEHLIDELDYILLPTEGWNRLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPGEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 SSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRHNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A+QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVFLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLAKPMQYKVVVPKIGNILDLCTALSALSGVAADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
S + +DD ++ +R + + ++ I +EK S LFG P +
Sbjct: 513 SIMERDDIYVFEIAINRTEDTE-QVIIPVCLREKCRHTSYSHSGSSLFGQPFL 564
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 725 VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ LDW ++ + Y D S +D + K ++ + L C++ F T+E LG +D
Sbjct: 720 LALDWDPELKKRYFDDSAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDP 777
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V FPI +LD+S+++
Sbjct: 778 WYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVGFPINDLDMSEFLI 837
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 838 NPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 868
>gi|395331753|gb|EJF64133.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1301
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 320/1018 (31%), Positives = 459/1018 (45%), Gaps = 219/1018 (21%)
Query: 27 QIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRA 86
Q +Q +++ + +G ++++S RWY+ W + + G+E +
Sbjct: 98 QKLQHVEDALKAPMVKGETWYIVSRRWYQRWRKAMTGEEDKEGRL-------------EE 144
Query: 87 ERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP--ALP 144
+ GP+DNS++ NG EV L E D VP+ VW+ WY G P +LP
Sbjct: 145 KDVGPVDNSNLCSR-NG-------EVTSQLIEHIDCEFVPEGVWKLYEEWY-GPPKFSLP 195
Query: 145 RKMISEGIVNEKRVE-------VFXLCLKLIDSRDNSQTVIRLSKKAS---TRQLYEKVC 194
RK+I GI+ E +E V+ L I + + LS + R+ + +
Sbjct: 196 RKVIERGIMKEPTLELRPPKFSVYLLSTSSIPGQSTPPKEVVLSSTDTVTHARKAFAEAI 255
Query: 195 KLRGIEQEKARIWDYFNKQRSTSPLDVSDQ--TLDDAMLQMDQDILLEVQVDNGISMDST 252
+ + R+W ++ ST L ++ T L + + E VD+G +
Sbjct: 256 STQKAAGGQYRVWRIPSQATSTELLYPVERLRTCGATELGTSEATVEEEFVDSGEAFVVE 315
Query: 253 GNDLALVPIEPSR----------------------------------SSLTIAGGPALSN 278
D + PS S L PA+S
Sbjct: 316 FMDRDEWTVNPSEFTSQPNGTLPQLTPPPPPPPTQPAPLFNSNTDFFSQLQQKSPPAVS- 374
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
TT S F S + D + K + G GL N+GNTCFMNSALQCL
Sbjct: 375 --TTAV-------SLFKSGAVASADKPSTSARPKTAREPGTLGLGNMGNTCFMNSALQCL 425
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW--SSGRAAVAPRAFKGK 395
VHTP+L YFL G Y +E+N +NPLGMH +A AFG +L ++W S ++ PR FK
Sbjct: 426 VHTPELVDYFLTGVYQEELNPDNPLGMHSAIAQAFGAMLTRIWDNESTLSSYTPREFKQT 485
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDE---EVANEC 452
L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E D G D+ E+AN
Sbjct: 486 LQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKELVELANLS 545
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+ + RNDS++VD+FQGQY+STLVCP C+KVSITFDPFMYLTLPLP V + + Y
Sbjct: 546 WEGYMKRNDSVVVDLFQGQYQSTLVCPECNKVSITFDPFMYLTLPLP--VQKKWQHDILY 603
Query: 513 A----NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+ +P +T + L E LL E++NH+ ++ ++
Sbjct: 604 VPWDLEKPHVKIPIEIT---RDASFKAVRQLLGRWMNSNPENLLTLEIFNHRFYKNLDDT 660
Query: 569 AELISSIKDDEHIVAYRF--DRKQGGKIK--------LEIVNRWQEKSASDYLKGSERKL 618
+ + + + IV + + +Q K + + S + Y +GS L
Sbjct: 661 VG-VDDMSEQDTIVCFELPCNAQQSRTYKPQPNDPFIVPVFASETTPSRAGYGRGS--NL 717
Query: 619 FGAPLVTYLEEEHLSGADI--DIAVSKLL------------------------------S 646
F +P V + +E + D V +L S
Sbjct: 718 FASPFVVVITQEQAKDPEAMYDAVVDRLQRWTIHARDLFTWEAGSRSDDMEPVHIPISGS 777
Query: 647 PLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETA------------ELEDLCSREL 694
P+R T + KENG + V + + + + + E A +L R++
Sbjct: 778 PVRDTITEI-----KENGDIVTVEERVPDEGDIADEKATIVQQADEDDDMDLASAVPRKV 832
Query: 695 SFQLSLTDERISSC-KPI------------------QKDSILKPG----KHIKVLLDWTD 731
F+ L R+ C +P Q+ + K G +H L++ +
Sbjct: 833 GFKRDLFQIRVHKCSQPYGVGYNSYSSNPGRYDTWEQRAATAKDGVLLRQHDAFYLEFDN 892
Query: 732 DVHELY----------------DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTE 775
V Y D +L K T KK + I+L CLD F E
Sbjct: 893 PVKTYYFGDESNHWEYALWNKFDEFVHPELVASRKAASTHKK---KGITLQDCLDEFTKE 949
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E LG DD+WYCP+CK+H+QATK+ DLW +PD+LV HLKRFS SR L++K+DTFV+FP+
Sbjct: 950 EKLGEDDLWYCPRCKKHQQATKRFDLWKVPDILVVHLKRFSNSRMLRDKIDTFVDFPLEG 1009
Query: 836 LDLSKYMKSKD--------------------GESYVYDLFAISNHYGGLGGGHYTAYA 873
LDL+ + + E VYDLFA+ H GGLGGGHY AYA
Sbjct: 1010 LDLTSMVGERSVGKRLQETGVDVESLGLHDLEEPLVYDLFAVDEHLGGLGGGHYRAYA 1067
>gi|320164457|gb|EFW41356.1| ubiquitin carboxyl-terminal hydrolase [Capsaspora owczarzaki ATCC
30864]
Length = 919
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/559 (42%), Positives = 318/559 (56%), Gaps = 40/559 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTCFMNS LQCL ++ L +YF+ D Y ++NT NPLGM GELA +G+L+
Sbjct: 330 GALGLRNLGNTCFMNSGLQCLSNSMALTRYFVDDSYLRDVNTTNPLGMRGELAQEYGELV 389
Query: 377 RKLWSSGRAAVAPRAF-KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ LWS ++ K KL+ FAPQF+GY QHDSQELLAFLLDGLHEDLNRV +KPYI
Sbjct: 390 KALWSDNPSSSVSPFSFKYKLSMFAPQFNGYQQHDSQELLAFLLDGLHEDLNRVTKKPYI 449
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E KD+ GRPD EVA+E W HK RNDS+IVD+FQGQ+KSTLVCPVC +VSITFDPFMYL+
Sbjct: 450 EAKDANGRPDAEVADEMWHMHKQRNDSIIVDLFQGQFKSTLVCPVCDRVSITFDPFMYLS 509
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPLP ++VTV + P+ V + K L AL+ L+ D +LL E
Sbjct: 510 LPLPEK-RYAISVTVVLRDPQRRPICVKVRVPKDATVFVLRQALADLLELRAD-SILLVE 567
Query: 556 VYNHQIFRFFEN--PAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKG 613
Y +I EN P ++ + AY D + ++N +S +
Sbjct: 568 TYQSKIDSRLENTEPCAAYFKLRHGHELYAYEVDTIERHH---HLINVCFLQSNFETDTA 624
Query: 614 SERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDEL 673
+ + G P++ E +SGA++ V + P + K+ +V DE
Sbjct: 625 ASGRFVGRPIICSFPREDVSGAEVYEVVMTHMRP----------YFNKQ-----DVNDEG 669
Query: 674 SNSHNESVETAELEDLCSRELSFQLSLTD---ERISSCKPIQKDSILKPGKHIKVLLDWT 730
S E E F L D E +S + D+ + W
Sbjct: 670 SEMATE-----------DSEYPFSLIYLDHHAEFPASLHIVPNDATPVSWATGFFGIRWL 718
Query: 731 DDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
D L D + + L + + ++T ++SL C+ FL +E LG DD WYC QCK
Sbjct: 719 PDA--LADAGFDQTLYLARDDHESTRETSGTSVSLGDCMQLFLKQEQLGADDPWYCSQCK 776
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY 850
+H+QA KK DLW P+ LV HLKRFS+SRY ++KL+T V+FPI + +L++YM S E
Sbjct: 777 QHQQAYKKFDLWRAPETLVVHLKRFSFSRYSRSKLETHVDFPITDFNLAEYMCSDVTEPL 836
Query: 851 VYDLFAISNHYGGLGGGHY 869
+YDL+A+SNH+GGLGGGH+
Sbjct: 837 LYDLYAVSNHFGGLGGGHF 855
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 40/178 (22%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFD------SPHMNGVSSKRAERP----------- 89
+IS RW+ WER V + + + V + R
Sbjct: 59 MVISARWFARWERCVRPLDATTATATVSDAGADADAAAAAVEAGNLVRTALTWTEDAGLA 118
Query: 90 -----GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG-GPAL 143
GPIDNS I+ +D +R +L DY L+P W L WY G +
Sbjct: 119 LRGIVGPIDNSSILT--------EDGLLRPSLLMQTDYELLPLNAWNLLLGWYGAIGHPI 170
Query: 144 PRKMISEGIVNEKRVEVFXLCLKLI-------DSRDNSQTVIRLSKKASTRQLYEKVC 194
R++ISE + RVEV+ L + L D + + +SK+A+ L + C
Sbjct: 171 ERQVISES--DHLRVEVYPLNIILSPITADTPDLKPTTSATRAISKQATLSALKKVAC 226
>gi|11993469|gb|AAG42753.1|AF302662_1 ubiquitin-specific protease 8, partial [Arabidopsis thaliana]
Length = 470
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/441 (47%), Positives = 278/441 (63%), Gaps = 19/441 (4%)
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD EVA+E W+ H ARNDS+IVDV QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP T
Sbjct: 1 RPDAEVADEYWRPHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTS 60
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
RTM +TV A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++I
Sbjct: 61 MRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNRII 120
Query: 563 RFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER---KLF 619
RF E P + ++ I+D + +V YR + ++ +K ++ G K F
Sbjct: 121 RFLEEPTDSLTLIRDGDKLVVYRLKKDANNS---PLIVYMHQKLEEQFISGKSSPTWKAF 177
Query: 620 GAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNE 679
G PLV+ L + +G+D++ KLLS + + EN E D+
Sbjct: 178 GIPLVSRLCDVE-NGSDVENLYLKLLSSFKM--PTEFFTENLENPTEEEATDKTDTDGTT 234
Query: 680 SVETAELEDLCSRELS-----FQLSLTDERISSCKP-IQKDSILKPGKHIKVLLDWTDDV 733
SVE D+ S +L LTD+R +S + + K+ + K + VL W
Sbjct: 235 SVEDTNSTDVKETTESLPDPVLRLYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKE 294
Query: 734 HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHR 793
++YD ++ LP V K+G K QE++SLF CL+AFLTEEPLGPDDMWYCP CKEHR
Sbjct: 295 LDVYDTCFLSSLPEVSKSG---TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHR 351
Query: 794 QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVY 852
QA KKLDLW LP++LV HLKRFSYSR++KNKL+ +V+FP+ NLDLS Y+ K+G+ +Y Y
Sbjct: 352 QAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRY 411
Query: 853 DLFAISNHYGGLGGGHYTAYA 873
L+AISNHYG +GGGHYTAY
Sbjct: 412 MLYAISNHYGSMGGGHYTAYV 432
>gi|296089361|emb|CBI39133.3| unnamed protein product [Vitis vinifera]
Length = 1092
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/269 (69%), Positives = 217/269 (80%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
GL GL N+GNTCFMNSA+QCLVHTP L YFLGDY EIN ENPLGM+GELALAFGDLLR
Sbjct: 104 GLTGLHNIGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEINYENPLGMNGELALAFGDLLR 163
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ G VAPR FK KL+ FAPQFSGYNQHDSQE LAFLLDGLHEDLNRVK KPYIE
Sbjct: 164 KLWAPGATPVAPRMFKLKLSSFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCKPYIEA 223
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
D GRPDEEVA+E W+NH ARNDS+IV++ QGQ++S LVCPVC KVS+TFDPFMYL+LP
Sbjct: 224 GDPDGRPDEEVADEYWRNHLARNDSIIVNLCQGQFRSMLVCPVCKKVSVTFDPFMYLSLP 283
Query: 498 LPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVY 557
LPST RTMTVTV +G+ LP P TVT+ K G KDLI ALS AC L+ DE LL+AE+Y
Sbjct: 284 LPSTTMRTMTVTVLSTDGTTLPYPCTVTVPKCGRLKDLIQALSIACSLRNDERLLVAEIY 343
Query: 558 NHQIFRFFENPAELISSIKDDEHIVAYRF 586
N+ I R+ E P++ ++ I+D + +VAYR
Sbjct: 344 NNCIIRYLEEPSDSLALIRDGDRLVAYRL 372
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 163/285 (57%), Gaps = 45/285 (15%)
Query: 616 RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP--EVIDEL 673
RK+FG PLV + E +G DI KLL P F+P + +D++
Sbjct: 786 RKMFGIPLVVRMSECS-NGCDIHKQFLKLLDPF----------------FMPTEDSLDDI 828
Query: 674 SNSHNESVETAELEDLCSRELS-------------------FQLSLTDERISS----CKP 710
+ + N + E E+ED S +S F LTDE+ S+
Sbjct: 829 T-AGNAANEDTEMEDAISSTVSNGDANSDSETGDELQLGNNFSFYLTDEKGSTKGSNINM 887
Query: 711 IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLD 770
+ + I + + + VL+ W + E YD + LP + K K+ QE++SL+ CL+
Sbjct: 888 NKLELISQLPRRLNVLVHWPYRMIEKYDTCLLSLLPEICKPELFAKRP-QESVSLYKCLE 946
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVN 830
AFL EEPLGP+DMW CP CK+HRQA+KKLDLW LP++LV HLKRFSYSR+ KNKL+TF++
Sbjct: 947 AFLKEEPLGPEDMWNCPCCKKHRQASKKLDLWRLPEILVIHLKRFSYSRFWKNKLETFID 1006
Query: 831 FPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAK 874
FPI +LDLS Y+ K+ S Y L+AI NHYGG+G GHYTA+ +
Sbjct: 1007 FPIDDLDLSTYIAQKNSHLSNHYKLYAICNHYGGMGSGHYTAFVR 1051
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 255/672 (37%), Positives = 341/672 (50%), Gaps = 128/672 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL N+GNTCFMNSA+QCL H +L YFL G Y +E+N +NPLGMHG +A AFG L+
Sbjct: 362 GTRGLGNMGNTCFMNSAIQCLAHNTELVDYFLTGAYQEELNYDNPLGMHGAVAQAFGALM 421
Query: 377 RKLW--SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
++W S ++ PR FK L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY
Sbjct: 422 SRIWDPESTMSSYTPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPY 481
Query: 435 IEMKDSGGRPDE---EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+E D G D+ E+AN W+ + +NDS++VD+FQGQY+STLVCP CSKVSITFDPF
Sbjct: 482 VEKPDWEGGGDKELVELANTSWEGYMKQNDSVVVDLFQGQYQSTLVCPECSKVSITFDPF 541
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT---VTLMKHGCCKDLILALSTACCLKID 548
MYLTLPLP V + TV Y L P V L +H KD+ L D
Sbjct: 542 MYLTLPLP--VQKKWHHTVLYIPWD-LEKPHVRVPVELNRHSSFKDVRTLLGRWMGADPD 598
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF--DRKQGGKIKLE-----IVNR 601
LL EV++HQ ++ ++ + + D++ IV + + +Q K + I+
Sbjct: 599 -NLLTLEVFSHQFYKNLDDTV-VCEDMADNDVIVCFELPCNAQQSRTYKPDPDEPFIIPV 656
Query: 602 WQEKSASDYLKGSERK---LFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR-------- 650
+ +S L+ + R LFG P VT +++E D + ++S L+R
Sbjct: 657 FLCESPP--LRPTYRSGPTLFGYPFVTVIDQEQ--AKDPEAIYDAIVSRLQRWTVQASHL 712
Query: 651 TYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE------------------------- 685
+ A + E +P + + NS NE E E
Sbjct: 713 SIWVAGSADDMEPVHIPILGSPVVNSVNEIKENGEVVTVEEAAPEEGDIADEKASVVHQE 772
Query: 686 -------LEDLCSRELSFQLSLTDERISSCKPI-------------------QKDS---- 715
LED ++ F+ L R+ C+ Q+ S
Sbjct: 773 DEDDDMGLEDAIPGKVGFKRDLFTIRVQKCEQAYGVGHSSFGNNHGRYETWEQRASKSGI 832
Query: 716 ILKPGKHIKVLLD--------------WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQE 761
+L+P + D W + +D L K T K Q+
Sbjct: 833 LLRPDDAFYIEFDDGLKSFYFGDERNSWEYALWNHWDEFVHPKLAASRKAASTQK---QK 889
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CLD F EE LG DD+WYCP CK+H+QATK+ DLW LPDVLV HLKRFS SR L
Sbjct: 890 GITLQDCLDEFTKEEKLGADDLWYCPSCKKHQQATKRFDLWKLPDVLVVHLKRFSDSRML 949
Query: 822 KNKLDTFVNFPILNLDLSKYMKSK------------------DG--ESYVYDLFAISNHY 861
++K+DTF++FPI LDL++ + + +G E YDLF + H
Sbjct: 950 RDKIDTFIDFPIEGLDLTEMVGERLVGSRLREQGADVEALGLEGLDEPLQYDLFGVDEHL 1009
Query: 862 GGLGGGHYTAYA 873
GG GGGHY AYA
Sbjct: 1010 GGSGGGHYRAYA 1021
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 27 QIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRA 86
Q ++ LK D ++ G ++++ RWY W++ + G+E +
Sbjct: 54 QKLEFLKRSQDKPMQVGETWYIVPRRWYFRWKKTITGEEDKEGRV-------------EE 100
Query: 87 ERPGPIDNSDII-QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP---A 142
+ GP+DN+ + Q G +V +L E D VP++VW KL WY G
Sbjct: 101 KDLGPVDNTPLCDQRG---------QVTSDLIEHVDCEFVPEEVWNKLLEWYVYGEPRYP 151
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKL 167
LPRK+I+ G++ E +E+ K+
Sbjct: 152 LPRKVIARGLMQEPVLELRPPSFKV 176
>gi|60360166|dbj|BAD90302.1| mKIAA4155 protein [Mus musculus]
Length = 747
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 253/667 (37%), Positives = 351/667 (52%), Gaps = 50/667 (7%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 24 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 72
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 73 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 125
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 126 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 185
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 186 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 244
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 245 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 299
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 300 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 359
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 360 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 419
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 420 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 479
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 480 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 539
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQGGKIKLEIVNRW 602
+ E +++ +VYNH+ + F+ E +S I + I Y + G + + +
Sbjct: 540 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEVCNTSMDGSECITLPVYF 597
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-----PLRRTYSSAKA 657
+EK + S L+G PL+ + + L+ + AV +S PL + S+
Sbjct: 598 REKKSRPSSASSGAVLYGQPLLVSVPKHKLTLESLYQAVCDRISRYIKQPLPDEFLSSPL 657
Query: 658 HGGKENG 664
G NG
Sbjct: 658 EPGACNG 664
>gi|108862978|gb|ABA99902.2| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
Length = 801
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/538 (41%), Positives = 296/538 (55%), Gaps = 84/538 (15%)
Query: 122 YVLVPQQVWEKLFCWY-KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRL 180
Y LV ++ K W+ G +K +S + E V ++ + L++ +RD + +++
Sbjct: 104 YALVAADLFSKARAWHIDSGKNAGKKSLS---IEEGSVNIYPIMLRVSVTRDTNALTVKI 160
Query: 181 SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE 240
SKK ++ + +++ K+ + E IWD+ R+T L + DQ++ LE
Sbjct: 161 SKKDNSAENFKRANKILTSDSEPVHIWDF--SGRTTFILMNEWNRMPQDTRSSDQEMPLE 218
Query: 241 VQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
+ + + G + + L + ++SNG G MD
Sbjct: 219 IHFYDLSEPTANGTN-------GKKDELALTMSRSMSNGSIMG---------------MD 256
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTEN 360
+D S GL GL NLGNTCFMNSA+QCL HT L
Sbjct: 257 LDSSGSSKQVGT-----GLIGLDNLGNTCFMNSAVQCLAHTSKL---------------- 295
Query: 361 PLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
GELA +FGDLLRKLW+ R VAPR FKGKLARFAPQFSG+NQHDSQELLAFLLD
Sbjct: 296 -----GELAYSFGDLLRKLWALDRTPVAPRQFKGKLARFAPQFSGFNQHDSQELLAFLLD 350
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ----------- 469
GLHEDLNRVK KPY E KDS GRPDEEVA+E W NH ARNDS+IVD+ Q
Sbjct: 351 GLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHIARNDSIIVDICQRKGSVGQIKFP 410
Query: 470 ------------------GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
GQYKSTLVCP C KVS+TFDPFMYL+LPLPST RTMT+TVF
Sbjct: 411 SLAGVVVALLFLLPKWTHGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPSTTMRTMTITVF 470
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+G+ P P+TV++ K G K LI ALS AC LK DE LL+AEVYN + R+ E P+E+
Sbjct: 471 NTDGTTGPSPYTVSVPKSGDTKTLIDALSIACSLKGDERLLVAEVYNSALIRYLEEPSEV 530
Query: 572 ISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
IS I+D + +VAY+ + + N+ E + + + + S K FG PLV+ L +
Sbjct: 531 ISLIRDGDRLVAYKLPKDSEDAPIVVFRNQRMESTLTSFGRKS-WKSFGTPLVSSLPD 587
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 112/143 (78%), Gaps = 2/143 (1%)
Query: 731 DDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
D+ E Y+ S + +LP ++K ++ QE SL++CL+AF+ EEPLGP+DMWYCP CK
Sbjct: 601 DNGLEQYNFSSLDNLPEIYKAVLFSRRP-QETCSLYACLEAFIKEEPLGPEDMWYCPGCK 659
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-S 849
EHRQA+KKLDLW LP++L+ HLKRFSYSRY KNKL+T V+FP+ +LDLSKY+ S+ + S
Sbjct: 660 EHRQASKKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDLSKYIGSRGQQIS 719
Query: 850 YVYDLFAISNHYGGLGGGHYTAY 872
Y L+AISNHYG +GGGHYTAY
Sbjct: 720 NHYRLYAISNHYGSMGGGHYTAY 742
>gi|426340532|ref|XP_004034183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Gorilla gorilla gorilla]
Length = 633
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 249/651 (38%), Positives = 343/651 (52%), Gaps = 48/651 (7%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYHVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS + E +++A+VYNH+ + F+ L + D+ V
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSV 572
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAV 641
G + + ++E+ + S L+G PL+ + + L+ + AV
Sbjct: 573 DGSECVTLPVYFRERKSRPSSTSSASALYGQPLLLSVPKHKLTLESLYQAV 623
>gi|388583864|gb|EIM24165.1| UCH-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 1059
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 304/906 (33%), Positives = 441/906 (48%), Gaps = 183/906 (20%)
Query: 115 NLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRKMI-SEGIVNEKRVEVFXLCLKLIDSRD 172
NL G ++P+ V KL W+ GP + R ++ + I N +RVE++ +L+
Sbjct: 120 NLSIGDQIEIIPEDVNIKLNDWFGYQGPQIKRIVVKTSDIPNTERVELYPPTFRLLALTS 179
Query: 173 NSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQ 232
T +S++ +T L + A ++ S +D S+ + + +
Sbjct: 180 QKPTTSPVSEQETTFDLSIDAPLSMLLGMSIATLY-------PDSLVDSSNVSQRARLWR 232
Query: 233 MDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHT---------TG 283
+ +++D + +T DL I+ S SL I L +G T
Sbjct: 233 IPDTTNSPLKIDTLYYLPNTQRDL----IDTSNGSLKIYEA-MLEDGGTFCLEVLDKFGN 287
Query: 284 YRFNQYPGS----SFG-STFMDMDDGYDSYNT--------AKKGEKGGLAGLQNLGNTCF 330
+ +N Y S FG S F+D + S NT ++K + GL GLQNLGNTCF
Sbjct: 288 WPYNDYEQSVLDQPFGKSGFLDRLESKQSSNTKMMTRSQSSQKVKTKGLVGLQNLGNTCF 347
Query: 331 MNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNSALQCL +T +L+ YFL G YS E+N +NPLGM G++A +FG L+ KLW +VAP
Sbjct: 348 MNSALQCLSNTSELSVYFLSGLYSKELNPDNPLGMSGQVAESFGQLVNKLWYGSSNSVAP 407
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV- 448
R FK L++FAP F+GY Q D+QE LAFLLDGLHEDLNR+K KPY E+ D G D +V
Sbjct: 408 REFKYTLSKFAPSFAGYGQQDTQEFLAFLLDGLHEDLNRIKSKPYTEIPDWEGGTDADVA 467
Query: 449 --ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTM 506
A CW +K RNDS+IVD+FQGQ+KST+ CP C +VSITFDPFMYLTLPLP +
Sbjct: 468 KLAKTCWDLYKQRNDSIIVDLFQGQFKSTVNCPECDRVSITFDPFMYLTLPLP--IQSKW 525
Query: 507 TVTVFYANGS----------GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
+V+Y LP + LMK+ + I+ ++ L +AE
Sbjct: 526 NGSVYYIPYDYNKKRLRIDLELPSNASFKLMKNKISQ--IVDTNS-------NNLWVAEE 576
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRF------DRKQGGKIKLEIVNRW-------Q 603
Y +F+ F + EL+S ++ + Y DR + KI W
Sbjct: 577 YKGNLFKSFLD-DELVSEMQSGDLCFVYELPIHIPQDRHE--KIDRVFETNWVMFPVYSS 633
Query: 604 EKSASDYLKGSERKLFGAPLVTYL------------------------EEEHLSGADI-- 637
S L G ++FG P++ L +E L +I
Sbjct: 634 TFKESSSLSG---EVFGKPMLIALLRSDAQNYQKVYQAIIEKYLHFTKNDEALKKINIHS 690
Query: 638 -DIAVSKLLSPLRRTYS--SAKAHGGKENG----------FLPEVIDELSNS----HNES 680
DI + L +P YS ++ + G+ N F +++ + S NE
Sbjct: 691 KDITLRHLEAPSNSYYSYRTSDVNTGRSNNIERNSKTDLKFRASIVENILKSTLLKKNEK 750
Query: 681 VETAELEDLCS------RELSFQLSLTDERISSC-----KPIQKD-SILKPGKHIKVLLD 728
+ED+ E+ SL D+ I S QK S++K G+ + +++
Sbjct: 751 NPVEHIEDVNKIDDQGDLEMKQDNSLQDQSIESLYENLETERQKSLSLIKFGEAL--VVE 808
Query: 729 WTDDVHE------------------LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLD 770
W +D+ E + DP Y++ K+ ++ I++ CLD
Sbjct: 809 WKNDLAEEVFGDDLSSTGLWEQFDVIEDPQYVQ--------SKQTSKSPKKGITIEDCLD 860
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVN 830
F EE LG +D+WYC +C++H+QATKK DLW +PDVLV HLKRF+ SRY ++KLD FV+
Sbjct: 861 EFTKEEKLGEEDLWYCSKCQKHQQATKKFDLWKVPDVLVVHLKRFASSRYNRDKLDQFVD 920
Query: 831 FPI--LNLD-------LSKYMKSKDG-----------ESYVYDLFAISNHYGGLGGGHYT 870
FPI LN+D ++ +K G E +YDL+AI NHYGGLGGGHYT
Sbjct: 921 FPIEELNIDDRVGEKQVANSIKLNGGNPVEVGIENSEEDAIYDLYAIDNHYGGLGGGHYT 980
Query: 871 AYAKVN 876
+YA+ N
Sbjct: 981 SYARNN 986
>gi|224613346|gb|ACN60252.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 647
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 226/586 (38%), Positives = 319/586 (54%), Gaps = 70/586 (11%)
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
ENPLGM GE+A ++ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFL
Sbjct: 2 ENPLGMRGEIAESYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL 61
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
+DGLHEDLNRVK+KPY+ ++D+GGR DE VA E W NH+ RNDS+IVD+F G +KSTLVC
Sbjct: 62 MDGLHEDLNRVKKKPYLALQDAGGRKDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC 121
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+KVS+TFDPF YLTLPLP RTM V + + P + V + K G DL A
Sbjct: 122 PECAKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRIDPQSRPTQYRVVVPKLGSVTDLCSA 181
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY-------------- 584
LS + E +++A+VYNH+ + + + ++ I + + I Y
Sbjct: 182 LSRLSGIPA-ENMVVADVYNHRFHKIYRR-DDGLNQIMEKDDIFVYEVTEEDAESMNLPV 239
Query: 585 ----RFDRKQGGKIK--------------------------LEIVNRWQEKSASDYLKGS 614
R + GG LE + R+ +S S +G
Sbjct: 240 YFRERHSKHTGGSTGTMLFGQPLLITVPRQNLAADMLYEKVLERIGRYVTRSQSSTGEGR 299
Query: 615 ERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR-----------RTYSSAKAHG---G 660
+ + E + ++ + A S SPL ++ +G G
Sbjct: 300 ASASASSASCSQAAECSATSSNRNAAASGSGSPLSDGASCSSSNSSNHSGTSNGNGVCEG 359
Query: 661 KENGFLPEVIDELSNSHNESVETAELED-----LCSRELS--FQLSLTDER-ISSCKPIQ 712
+E +V E N +E +T++LE+ CS F S+ + ++ P+
Sbjct: 360 EEEAMDQQVSPEPENGQSEEEDTSDLENGPKTKPCSSTPPKLFSFSMVNSYGTANISPLP 419
Query: 713 KD-SILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
D +ILK H V +DW D +L + H++ K ++ ++L C++
Sbjct: 420 CDGNILKLNTHSTVAIDWDSDSKKLCYDDQEAEAYEKHESMLQAPK-KKATVALRECIEL 478
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V+F
Sbjct: 479 FTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDF 538
Query: 832 PILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
P+ +L++S+++ YVYDL A+SNHYGG+GGGHYTAY K A
Sbjct: 539 PVRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKA 584
>gi|147827031|emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera]
Length = 1670
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/440 (45%), Positives = 273/440 (62%), Gaps = 31/440 (7%)
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S+ VD +GQYKSTLVCPVC+K+S+TFDPFMYL+LPL ST+TRTMTVTVF +GS LP
Sbjct: 1134 SIWVD--KGQYKSTLVCPVCNKISVTFDPFMYLSLPLQSTITRTMTVTVFTCDGSALPSA 1191
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVY--------NHQIFRFFENPAELIS 573
TVT+ K G C+DLI ALS AC +K +E LLLA Y NH I RF E+P L+S
Sbjct: 1192 CTVTVPKQGRCRDLIQALSGACSVKHNEKLLLARGYQMWCLQIRNHLIDRFLEDPLILLS 1251
Query: 574 SIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE-EEHL 632
+I DD+H+ AY+ + I L++++R +E+ + K K +G PLV+ + ++ +
Sbjct: 1252 TINDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDVI 1311
Query: 633 SGADIDIAVSKLLSPLRRT----------------YSSAKAHGGKENGFLPEVIDELSNS 676
+ DI V +LSP+ RT S F + +L +
Sbjct: 1312 TRGDIQSIVYTMLSPMLRTERQGHTDISETSISVAASDPSCDITTSEAFTDSIESDLKDM 1371
Query: 677 HNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHEL 736
S +T L L + + + D + KPI+ S I V +DW+ E
Sbjct: 1372 DGNSYKTVTLSKLPLQLVDENNACIDLSVGEEKPIKLSS---SSMSILVFVDWSHKFLEK 1428
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
YD Y+++LP V K G KK R E +SL++CL+AFL EEPL P+DMW+CPQCKE RQA+
Sbjct: 1429 YDTHYLENLPEVFKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWFCPQCKEQRQAS 1488
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLF 855
KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI +LDL+ Y+ K + S +Y+L+
Sbjct: 1489 KKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTNYVAHKNNSRSQIYELY 1548
Query: 856 AISNHYGGLGGGHYTAYAKV 875
A++NHYGG+G GHYTA+ K+
Sbjct: 1549 ALTNHYGGMGSGHYTAHIKL 1568
>gi|392565614|gb|EIW58791.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1313
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 261/671 (38%), Positives = 348/671 (51%), Gaps = 125/671 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL N+GNTCFMNSA+QCL H +L YFL G Y +E+N +NPLGMHG +A AFG L+
Sbjct: 401 GTLGLGNMGNTCFMNSAIQCLAHNTELVDYFLTGVYQEELNPDNPLGMHGAVAQAFGALM 460
Query: 377 RKLW--SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
++W S ++ PR FK L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY
Sbjct: 461 SRIWDPESTMSSYTPREFKQTLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPY 520
Query: 435 IEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+E D G D+E+ AN W+ + RNDS++VD+FQGQY+STLVCP CSKVSITFDPF
Sbjct: 521 VEKPDWEGGGDKELVELANTSWEGYMKRNDSVVVDLFQGQYQSTLVCPECSKVSITFDPF 580
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT---VTLMKHGCCKDLILALSTACCLKID 548
MYLTLPLP V + TV Y L P V L +H KD+ L D
Sbjct: 581 MYLTLPLP--VQKKWHHTVLYIPWD-LEKPHVRVPVELNRHSSFKDVRQLLGRWMGADPD 637
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF--DRKQGGKIKLE-----IVNR 601
LL EV++HQ ++ ++ + + D++ IV + + +Q K + I+
Sbjct: 638 -NLLTLEVFSHQFYKNLDDTV-VCEDMADNDVIVCFELPCNAQQSRTYKPDPDDPFIIPV 695
Query: 602 WQEKSASDYLKGSER---KLFGAPLVTYLEEEHLSGADI--DIAVSKL------------ 644
+ +S L+ + R LFG P VT +++E + D VS+L
Sbjct: 696 FPCESPP--LRPTYRSGPNLFGYPFVTVIDQEQAKDPEAIYDAIVSRLQRWTVQASHLST 753
Query: 645 --------LSPLRRTYSSAKAHGG----KENGFL-------PE---VIDELSNSHNESVE 682
+ P+ S + KENG + PE + DE ++ ++ E
Sbjct: 754 WEAGSADDMEPVHIPISGSPVVNSVTEIKENGEVVTVEEAAPEEGDIADEKASVVHQEDE 813
Query: 683 TAE--LEDLCSRELSFQLSLTDERISSCKPI-------------------QKDS-----I 716
+ LED R++ F+ L R+ C+ Q+ S +
Sbjct: 814 DDDMGLEDAIPRKVGFKRDLFTIRVQKCEQAYGVGHSSFGNNHGRYETWEQRASAKNGIL 873
Query: 717 LKPGKHIKVLLD--------------WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA 762
L+P + D W + +D +L K T K Q+
Sbjct: 874 LRPNDAFYIEFDDGVKAFFFGDERNSWEYALWNHWDEFVHPELAASRKAASTQK---QKG 930
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+L CLD F EE LG DD+WYCP CK+H+QATK+ DLW LPDVLV HLKRFS SR L+
Sbjct: 931 ITLQDCLDEFTKEEKLGADDLWYCPSCKKHQQATKRFDLWKLPDVLVVHLKRFSNSRMLR 990
Query: 823 NKLDTFVNFPILNLDLSKYMKSK--------DG------------ESYVYDLFAISNHYG 862
+K+DTFV+FPI LDL++ + + G E YDLF + H G
Sbjct: 991 DKIDTFVDFPIEGLDLTEMVGERLVGSRLREQGADVEALGLDDLDEPLQYDLFGVDEHLG 1050
Query: 863 GLGGGHYTAYA 873
GLGGGHY AYA
Sbjct: 1051 GLGGGHYRAYA 1061
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 12 ENGGSCLPC--TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
++G + P T Q ++ LK D ++ G ++++ RWY W++ + G+E
Sbjct: 77 DSGQAAAPTAGTASTSAQKLEFLKRSQDKSMQVGETWYIVPRRWYFRWKKAITGEEDKEG 136
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDII-QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQ 128
+ + GP+DN+ + Q G +V +L E D VP++
Sbjct: 137 RV-------------EEKDLGPVDNTPLCDQRG---------QVTSDLIEHVDCEFVPEE 174
Query: 129 VWEKLFCWYKGGP---ALPRKMISEGIVNEKRVEVFXLCLKL 167
VW KL WY G LPRK+I+ G++ E +E+ K+
Sbjct: 175 VWTKLLEWYVYGEPRYPLPRKVIARGLMQEPVLELRPPSFKV 216
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 239/640 (37%), Positives = 340/640 (53%), Gaps = 80/640 (12%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
+P T +++ I LK L++G+ ++LI +RW++ W++YV FDS
Sbjct: 26 VPSTESQKQSIGTLLKTL----LRKGDEWYLIDSRWFKQWKKYV----------GFDSWD 71
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+ V PGPIDNS + + S ++ +L + DYVLVP + W KL WY
Sbjct: 72 LYNVGEHNL-YPGPIDNSGLFSDRKSQS------LKEHLIDELDYVLVPTEAWNKLVSWY 124
Query: 138 KG-GPALP--RKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV 193
G P RK++ G+ V +VEV+ L L L ++ + + V R KA T EK
Sbjct: 125 GSLGNQKPIIRKVVEHGMFVKHCKVEVYLLELNLCENDNMDKVVTRHFSKADTIDTIEKE 184
Query: 194 CK-LRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS 251
+ L I EK R+W+ + + L+ D T+ DA L Q +++E + ++G
Sbjct: 185 MRSLFDIPSEKETRLWNKY-MSNTYEQLNKLDSTVQDAGLFQGQVLVIEKKNEDGT---- 239
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
+P S S + Y +A
Sbjct: 240 -------------------------------------WPRQSCHSNYNSYSSSYSYRESA 262
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ GL+ L GNTCFMNSALQCL +TP L +YFL D Y EIN ENPLGM GE+A
Sbjct: 263 AQPGLCGLSNL---GNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAE 319
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ DL++++W S + VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK
Sbjct: 320 AYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVK 379
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+KPY+ ++D+ GRPDE VA E W NH+ RNDS+IVD+F G +KSTLVCP CSKVS+TFDP
Sbjct: 380 KKPYLALRDAEGRPDEIVAKEAWANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDP 439
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F YLTLPLP RTM V + + M F V + K G DL AL+ + E
Sbjct: 440 FCYLTLPLPMKKDRTMEVYLVRTDPQFRAMQFRVVVPKMGAVADLCSALAKLSGVP-SEN 498
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDY 610
+++A+VYNH+ + ++ + ++ I + + I Y + ++ L + R E+ A
Sbjct: 499 MVVADVYNHRFHKIYKR-DDGLNQIMEKDDIFVYEVLEEDSERMNLPVYFR--ERHAKHS 555
Query: 611 LKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
S LFG PL+ + +L+ +D ++L + R
Sbjct: 556 GGSSGTMLFGQPLLITVPRLNLT---VDTLYERVLERIGR 592
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 109/168 (64%), Gaps = 11/168 (6%)
Query: 715 SILKPGKHIKVLLDWTDDVHEL-YD----PSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
++LK H V +DW D L YD +Y K ++H + ++ ++L C+
Sbjct: 736 NLLKLTTHSTVAIDWDSDTKRLCYDDQEAEAYDKHESMLHA------QKKKTTVALRECI 789
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+R ++KLDT V
Sbjct: 790 ELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVV 849
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
+FPI +L++S+++ + Y+YDL A+SNHYGG+GGGHYTAY K A
Sbjct: 850 DFPIRDLNMSEFVCDPKADPYIYDLIAVSNHYGGMGGGHYTAYGKNKA 897
>gi|343959652|dbj|BAK63683.1| ubiquitin carboxyl-terminal hydrolase 15 [Pan troglodytes]
Length = 648
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 216/567 (38%), Positives = 319/567 (56%), Gaps = 59/567 (10%)
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLH
Sbjct: 1 MRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLH 60
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K
Sbjct: 61 EDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAK 120
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 121 ISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALS 180
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 181 GIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCLR 239
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE 662
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 240 EKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLH 299
Query: 663 -------NGFLPEVIDELSN--------------------SHNESVETAE---------- 685
NG P I E + S NE+ ++ +
Sbjct: 300 CCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSEN 359
Query: 686 ---LEDLC--------SRELSFQL-SLTDERISSCKPIQK-----DSILKPGKHIKVLLD 728
ED C R +FQ +L + I+ K + D L+ + + LD
Sbjct: 360 GLCTEDTCKGQLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALD 419
Query: 729 WTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCP 787
W D+ + Y D + +D + K ++ + L C++ F T+E LG +D WYCP
Sbjct: 420 WDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAEDPWYCP 477
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG 847
CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ + +
Sbjct: 478 NCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNA 537
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 538 GPCRYNLIAVSNHYGGMGGGHYTAFAK 564
>gi|441631760|ref|XP_003252781.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform 2
[Nomascus leucogenys]
Length = 648
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 318/572 (55%), Gaps = 69/572 (12%)
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLH
Sbjct: 1 MRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLH 60
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K
Sbjct: 61 EDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAK 120
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL ALS
Sbjct: 121 ISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSALS 180
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 181 GIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCLR 239
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKE 662
++ S Y + LFG P + + + ++ + ++ ++ + + + G
Sbjct: 240 EKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKISTETEETEGSLH 299
Query: 663 -------NGFLPEVIDELSN--------------------SHNESVETAE---------- 685
NG P I E + S NE+ ++ +
Sbjct: 300 CCKDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSEN 359
Query: 686 ---LEDLCSRELS------FQLSLTDERISSCKPIQKDSILKPGKHIK------------ 724
ED C +L+ F + + I+ D+ +HI+
Sbjct: 360 GLCTEDTCKGQLTGHKKRLFTFQFNNLGSTDINYIKDDT-----RHIRFDDRQLRLDERS 414
Query: 725 -VLLDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D
Sbjct: 415 FLALDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKKPFVKLKDCIELFTTKEKLGAED 472
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++
Sbjct: 473 PWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFL 532
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ + Y+L A+SNHYGG+GGGHYTA+AK
Sbjct: 533 INPNAGPCRYNLIAVSNHYGGMGGGHYTAFAK 564
>gi|281211003|gb|EFA85169.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 1138
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 264/850 (31%), Positives = 388/850 (45%), Gaps = 155/850 (18%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LK G ++LI W+ WE + SP E+ GPI N ++
Sbjct: 250 LKLGEKWYLICKPWFDKWESNMY------------SP----------EQLGPIINDTLLI 287
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVE 159
D +R N E QD+V+VP+ W+ Y G P + + + + +++ +
Sbjct: 288 T-------DTTHLRLNATEDQDFVVVPESTWDYFLKSY-GCPTIIVRKVVKSLISLQIDY 339
Query: 160 VFXLCLKLIDSRDNSQTVIRLSKKAST-RQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
+ CLK S ++ + K+ T + ++VCKL I R+WDY+N +
Sbjct: 340 KYPQCLKFFKSSQPTRIIEHFVCKSETISSVKDRVCKLFDINPADVRVWDYYNNNKYAEL 399
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
+ + + ++ L +Q ILL+ ++++G
Sbjct: 400 KNT--EYVSNSKLVENQLILLDERLEDG-------------------------------- 425
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
+P +T+ + G G L NLGNTCFMNS+LQCL
Sbjct: 426 ---------SWPPEKNHNTYSYSSRYNSRSGAPRPGVTG----LDNLGNTCFMNSSLQCL 472
Query: 339 VHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L +Y L D ++ ++N +NPLG HG+LA+ + L+++LW + PR K ++
Sbjct: 473 SNTVPLTRYLLNDKHNQDLNRDNPLGCHGDLAIEYAKLIKQLWRGDITSTGPRELKSQIE 532
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
RFAPQF GY+QHDSQELLAFLLDGLHEDLN+VK+KP+IE KD RPDE +A E W HK
Sbjct: 533 RFAPQFQGYHQHDSQELLAFLLDGLHEDLNKVKKKPFIEGKDYDNRPDEVIAKEQWDMHK 592
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
ARNDS+IVD FQ Q KS LVCPVC K+SITFDPFMYL+LPLP V + + + S
Sbjct: 593 ARNDSVIVDWFQSQLKSRLVCPVCGKISITFDPFMYLSLPLPVNVRKQFDIVFVPYDSSV 652
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKD 577
P P V + K G ++L+ +S + ++ L+A + + + + P + + I +
Sbjct: 653 APSPVKVEMPKTGVFEELLDIVSKQ--VNVEPERLVATMQSMSVIQKVYKPTQCVDIIGN 710
Query: 578 DEHIVAYRFDRKQGG-KIKLEIVNRWQEKSASDYLKGSERKLFGAPL--VTYLEEEHLSG 634
+ IV Y QGG K + VN S Y + P + +EE +
Sbjct: 711 RDTIVVYEI---QGGLKNPEQFVNFKVTMKTSSY-SNHFPFILSVPTQQLNNVEELYFHI 766
Query: 635 ADIDIAVSKLLSPLRRTYSS--------AKAHGGKENGFLPEV--IDELSNSHNESVETA 684
D + K L +R +SS + G EN D SN H V
Sbjct: 767 IDRLKHLIKDLDKVRDVFSSNEKLAPQNEEEQQGDENDPYRRYSQTDHYSNYH--QVMKK 824
Query: 685 ELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHE-LYDPSYIK 743
+D FQ++ K +K+ P ++L W ++ + +D ++
Sbjct: 825 RPKD---PRFIFQMA------PDHKYERKEFEFNPVNFDSIILQWDEESFDYFFDSEKLQ 875
Query: 744 DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWM 803
V F + ++ ++L CL+ F T E LGPDD WYC CKEH++ATKK L
Sbjct: 876 H--SVPPYVFHRDVSAEKELTLEQCLELFTTVEQLGPDDPWYCSTCKEHQRATKKFVL-- 931
Query: 804 LPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGG 863
K G + +YDLFA+SNHYG
Sbjct: 932 -----------------------------------------KPGSTPLYDLFAVSNHYGS 950
Query: 864 LGGGHYTAYA 873
LGGGHYTAY
Sbjct: 951 LGGGHYTAYG 960
>gi|74211276|dbj|BAE37701.1| unnamed protein product [Mus musculus]
Length = 582
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 208/514 (40%), Positives = 287/514 (55%), Gaps = 45/514 (8%)
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
RFAPQFSGY Q DSQELLAF+LDGLHEDLNRVK+KPY+E KD+ GRPD VA E W+NH+
Sbjct: 1 RFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHR 60
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+
Sbjct: 61 LRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQC 120
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKD 577
P+ + VT+ G DL ALS + E +++ +VYNH+ + F+ E +S I
Sbjct: 121 RPIQYRVTVPLMGAISDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITP 178
Query: 578 DEHIVAYRF-DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGAD 636
+ I Y + G + + ++EK + S L+G PL+ + + L+
Sbjct: 179 RDDIFVYEVCNTSMDGSECITLPVYFREKKSRPSSASSGAVLYGQPLLVSVPKHKLTLES 238
Query: 637 IDIAVSKLLS-----PLRRTYSSAKAHGGKENGF---------------------LPEV- 669
+ AV +S PL + S+ G NG L EV
Sbjct: 239 LYQAVCDRISRYIKQPLPDEFLSSPLEPGACNGSRSSYEGDEEEEMDHQEEGKEQLSEVE 298
Query: 670 ---IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIK-- 724
D+ + H+ES + + + R +F L ++SC +S+ GK +K
Sbjct: 299 GSGEDDQGDDHSESAQKVKGQPRHKRLFTFSL------VNSCGTADINSLATDGKLLKLN 352
Query: 725 ----VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGP 780
+ +DW + LY + H + +K ++ A++L C++ F T E LG
Sbjct: 353 SRSTLAIDWDSETRSLYFDEQESEACEKHLSMSQPQKKKKAAVALRECIELFTTMETLGE 412
Query: 781 DDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSK 840
D WYCP CK+H+QATKK DLW LP +LV HLKRFSY+RY ++KLDT V FP+ L++S+
Sbjct: 413 HDPWYCPTCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSE 472
Query: 841 YMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 473 FVCDRSARPYVYDLIAVSNHYGAMGVGHYTAYAK 506
>gi|324504579|gb|ADY41976.1| Ubiquitin carboxyl-terminal hydrolase 4 [Ascaris suum]
Length = 847
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 260/805 (32%), Positives = 403/805 (50%), Gaps = 94/805 (11%)
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEG 151
+DNS++ + G+ +G +++NL E QD+VL+P + L Y G R +I
Sbjct: 58 VDNSNLCE---GAEKG--FALKKNLIEKQDFVLLPLAAFSVLRRTY-GLAIEERDLIERT 111
Query: 152 IVNEKR------VEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLRGIEQEKA 204
+V R +EV+ +++ S + + I + S + ++ ++ I+Q +
Sbjct: 112 VVGSDRSPGSLHIEVYPATIRIARSDNIGEEHTIEIFSGESFESIKKRALEVLKIDQH-S 170
Query: 205 RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG-ISMDSTGNDLALVPIEP 263
I Y ++ L+V+D L+ + Q D ++ + + + +S ST N L
Sbjct: 171 TIQCYLAEEDLYRRLNVAD--LETVLSQDDLVVVDVLDIHSTDLSNTSTNNSKVLF---- 224
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
+SS + NG +T Q A K + G+ GL+
Sbjct: 225 GKSS------DVMRNGLSTNAISTQ---------------------PAHKSYRPGVCGLE 257
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTCFMNSALQCL + +L +YFL G Y +IN EN LGMHG+LA A+ DL+ +LW+
Sbjct: 258 NLGNTCFMNSALQCLSNVRELTEYFLNGCYKHDINEENVLGMHGQLARAYADLMEQLWNG 317
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
++APR K L ++ QFSGY+QHDSQELL+FLLDGLHEDLNRVK+K Y+E KDSGG
Sbjct: 318 SNRSMAPRKLKAVLGQYVQQFSGYSQHDSQELLSFLLDGLHEDLNRVKKKVYLEAKDSGG 377
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP-ST 501
RPD VA E W+ +K NDS+IVD GQ KST+VCP C VS+ FDPF +L+LPLP
Sbjct: 378 RPDSVVAAEAWQMYKMGNDSVIVDYLHGQLKSTVVCPQCKFVSVKFDPFCFLSLPLPPKE 437
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
+ +T+ N + +TV + + K++ + L L+L
Sbjct: 438 RIHKIVMTLVPLNPDRKWVKYTVLVTFNTMVKEVRALMRKQSAL--GNSLIL-------- 487
Query: 562 FRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGA 621
F N A L+ + DDE + A + L + +Q A+D + +
Sbjct: 488 FVVLHNKA-LVRIMNDDESLAA-------AYSMPLNQIYAYQVADANDTIT--------S 531
Query: 622 PL-VTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSH--- 677
PL + + + ++ D+ ++ P + SS G LP + + + H
Sbjct: 532 PLNIIQVRNQLVTSKDVVTVPLLMMVPSPDSLSSDFITGS----VLPRIREYFAKDHKRS 587
Query: 678 NESVETAELEDLCSRELSFQLSLTD--ERISSCKPI----QKDSILKPGKHIKVLLDWTD 731
NE D+ + +L L + + + +P+ +K ++ P + + +
Sbjct: 588 NEETNGCNEHDVATEDLLVTPDLVNYSDFNNMSEPVTITGEKQPLIWPTSLYRGIRGIS- 646
Query: 732 DVHELYDPSYIKDL--PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQC 789
V L+ P+ + D + + K ++ + C F +E L ++WYC +C
Sbjct: 647 -VTMLWQPNVLTDFCKKDMEEKELLTKHNVRKGADINECFHLFTRQELLSDGNLWYCSRC 705
Query: 790 KEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES 849
KEH+ ATKKLDLW LP VL+ HLKRF ++R+ + K+D V FP+ LDL+ + +
Sbjct: 706 KEHQHATKKLDLWKLPPVLIIHLKRFHFTRWSREKIDIPVEFPLTGLDLTSRVVDEKFGK 765
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAK 874
VYDL A+SNH GGLGGGHY A+A+
Sbjct: 766 AVYDLIAVSNHAGGLGGGHYWAWAR 790
>gi|313228437|emb|CBY23588.1| unnamed protein product [Oikopleura dioica]
Length = 820
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 269/899 (29%), Positives = 408/899 (45%), Gaps = 171/899 (19%)
Query: 10 MMENGGSCLP-CTPD--EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP 66
M+ + LP PD ++RQIV +S L E ++ LI +W+ W+ DE
Sbjct: 1 MILTEKNALPSIVPDYYKQRQIVLPALRES---LTEDAVWRLIPFKWFEQWKSIAEKDEN 57
Query: 67 SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVP 126
S ++ P+D S + + +++ NL+E QDY +VP
Sbjct: 58 S-------------------QKCPPLDISILFEKN---------KLKENLKEEQDYTMVP 89
Query: 127 QQVWEKLFCWYKGGPAL----PRKMISEGIVNEK-RVEVFXLCLKLI----------DSR 171
+ V+EKL W+ RK+I G + VEV+ + +++I +S+
Sbjct: 90 ENVYEKLNEWHGVSSNRNYENDRKVIKVGKFTVRLMVEVYKVKIQIILKFSGNDTCSESK 149
Query: 172 DNSQTVIRLSKKASTRQLYEKVCKLRG---IEQEKARIWDYFNKQRSTSPLDVSD--QTL 226
T+ ++ S + + + Q + R+W ++Q L+ Q+L
Sbjct: 150 GKKYTLKDFTRFQSKADMIRDILAMNNDLYPRQGQTRVWSRESQQEKWRHLNEESLSQSL 209
Query: 227 DDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRF 286
+ L + IL E Q D+G S D V + S +S+
Sbjct: 210 YELGLHSNGHILCEFQNDDG----SWPQDAEKVENKKSLASIV----------------- 248
Query: 287 NQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQ 346
+GG GL NLGNTCFMNS +QCL LA
Sbjct: 249 ---------------------------SSRGGKCGLVNLGNTCFMNSGIQCLAAVVPLAN 281
Query: 347 YFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSG 405
YFLGD + DEINT NPLG +G+L+ AF L++ +W ++VAP K + + QFSG
Sbjct: 282 YFLGDVWKDEINTVNPLGTNGKLSTAFARLVKNMWGGAESSVAPSEVKRECGQINTQFSG 341
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
Y Q+DSQEL++ +LD LHED NRV KPYIE ++ GR DEEVA E W+NH +RN S+IV
Sbjct: 342 YGQNDSQELMSTILDALHEDQNRVINKPYIEKAEANGRHDEEVAQESWENHTSRNASVIV 401
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
D F GQ+KST+ CP C +VS+TFDPF L++PLP T+ + + + A+ P+
Sbjct: 402 DNFHGQFKSTVRCPKCGRVSVTFDPFCTLSVPLPEAATKFLPLVLVQADNISQPLRIQKA 461
Query: 526 LMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR 585
+ + DLI L K D L E+Y + + + + EL + I +++ IV +
Sbjct: 462 IKRKMTIADLISELDEFKTQK-DSVWLTTEIYTKRFHKIYMD-NELPNQISENDLIVMF- 518
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
E K PL YLE E
Sbjct: 519 -----------------------------ELKPNHNPLAIYLEYE--------------- 534
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERI 705
+++ + SAK + DE NS + +++ A++E + ++ L+ DE+
Sbjct: 535 --IKQKFESAKREQFAHPFMINVPCDE--NSKSSTLKKADVEAHIRKSMTGILNDGDEQF 590
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTD-DVHELYDPSYIKDLPVVHKTGFTV--------- 755
+Q+ + + ++ D T + E + + + V K G V
Sbjct: 591 R----MQQVNSYSGNHGVGIIKDETVLTIDEYRSKANLVYVSTVWKNGEVVNSPSPKDIE 646
Query: 756 ---KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
K + I + CL+ F EE L + WYCP CKEH+QA K + +W LP VL+ HL
Sbjct: 647 TEDKANADKGIDINQCLNLFTIEEKLREGEEWYCPHCKEHQQAFKHMQIWKLPPVLILHL 706
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
KRF Y+R ++K+ V+FP LD+S Y+ Y+L A+SNH G LGGGHYTA
Sbjct: 707 KRFHYNRIFRDKVCDMVHFPTRGLDMSPYLLGPGAGKARYNLLAVSNHMGRLGGGHYTA 765
>gi|325182386|emb|CCA16839.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 1031
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 232/621 (37%), Positives = 330/621 (53%), Gaps = 74/621 (11%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
E+ G GL+NLGNTCF+NSALQCL H L YFL + ++N +NPLG GELAL +
Sbjct: 380 ERRGKVGLRNLGNTCFLNSALQCLSHMHVLTNYFLSTRFQQDLNRDNPLGTGGELALVYN 439
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
DL+R+LW + ++P A K +ARFAPQFSGY Q D+QELLA++LDGLHEDLNR+KQKP
Sbjct: 440 DLIRELWFGSTSQLSPIALKRAIARFAPQFSGYQQQDAQELLAYMLDGLHEDLNRIKQKP 499
Query: 434 YIEMKDSGGR-PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
Y E+++S G+ D VA+E W+ H RNDS+ VD QGQ+KST+VCPVCSKVSITFDP+
Sbjct: 500 YTEVQESDGKLEDAIVADEAWRRHLLRNDSIFVDHIQGQFKSTVVCPVCSKVSITFDPYN 559
Query: 493 YLTLPLPSTVTRTMTVTVFYANGSGLP-------MPFTVTLMKHGCCKDLILALSTACCL 545
+ L LP+ TR + V V + + + V ++K C + L +S C +
Sbjct: 560 CIQLELPTQTTRILDVIVVSDDAAQENELHACHFTRYAVQVIKKQCAQALCQEVSEVCGI 619
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF------------------- 586
L+LA+VY IFR + + ISSI D + IVAY
Sbjct: 620 AASR-LVLADVYQSTIFRLIRD-TDRISSISDGDRIVAYEMSSISSTTSNEKPPSPINID 677
Query: 587 ----DRKQGGKIKLEIVNRW------QEKSASDYLKGSERKLFGAPLVTYLEEEHLSGAD 636
+ K GK ++ +R+ Q D L+ R L G PL+ + +E+ + D
Sbjct: 678 VDHEETKYSGKPDTDMDSRYIGFLYHQIYETFDLLRSFSR-LAGIPLM-FAFDENTTCLD 735
Query: 637 IDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSF 696
S++LS TY + EN + ++ + H + A E S+ S
Sbjct: 736 ALHHWSRILS----TYIVQQK--SSENPYKSQLSPAMLAPH---IFVASSEGYVSQGRSV 786
Query: 697 QLSLTDERISSCKPIQKDSILKPGKHIK------VLLDWTDDVHE-----LYDPSY--IK 743
S + + +++ I G H ++L W ++ E Y P IK
Sbjct: 787 PASESVLFLEYLHSVERKYITVSGAHASSPGPFFLVLVWLSELLEPNPSTCYRPEVDEIK 846
Query: 744 DLPVVHKT-GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
D V G + E I+L +C F+ E L ++WYC CK HRQA K++++W
Sbjct: 847 DHKSVQALHGSKSLGSNNETITLDACFKNFIKPETLDDANLWYCASCKAHRQAHKRIEIW 906
Query: 803 MLPDVLVFHLKRFSY-SRYLKNKLDTFVNFPILNLDLSKY-MKSKD-------GESYVYD 853
+PD+L+ LKRF Y + L++KL V FP+ NL++ Y +++ D S YD
Sbjct: 907 KVPDILILSLKRFEYRNETLRDKLSVDVEFPLENLNMRPYCLQALDPNAANHFNRSLDYD 966
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
LFA+SNH+GG+ GHYTA AK
Sbjct: 967 LFAVSNHFGGMSFGHYTACAK 987
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 28/170 (16%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD-----------EP 66
+P + I Q L+ ++ L G FLI+ W++ W R V EP
Sbjct: 45 VPLSSQRREIIFQLLQQAANQSLHVGEKRFLITFHWWQKWCRIVDFKPRQLILSSFYMEP 104
Query: 67 SIDNISFDSPHMNGVSSKR-----AERPGPIDNSDIIQNGNGSSEG-DDL---EVRRNLE 117
S ++ S S H N + A IDN +++ + ++ DDL +R NLE
Sbjct: 105 SAESDS--SYHENRMEDGEMGEMDAHTVPSIDNVVLLRGMDDANRNLDDLVGAPLRTNLE 162
Query: 118 EGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNE------KRVEVF 161
E +D+VL PQ+VW+ CWY GGP + R ++S+ + ++ RV+++
Sbjct: 163 EYRDFVLAPQEVWDAFCCWYGGGPTIARFVVSKSVRDQDKSTTINRVQIY 212
>gi|313247032|emb|CBY35868.1| unnamed protein product [Oikopleura dioica]
Length = 816
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 268/895 (29%), Positives = 406/895 (45%), Gaps = 167/895 (18%)
Query: 10 MMENGGSCLP-CTPD--EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP 66
M+ + LP PD ++RQIV +S L E ++ LI +W+ W+ DE
Sbjct: 1 MILTEKNALPSIVPDYYKQRQIVLPALRES---LTEDAVWRLIPFKWFEQWKSIAEKDEN 57
Query: 67 SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVP 126
S ++ P+D S + + +++ NL+E QDY +VP
Sbjct: 58 S-------------------QKCPPLDISILFEKN---------KLKENLKEEQDYTMVP 89
Query: 127 QQVWEKLFCWYKGGPAL----PRKMISEGIVNEK-RVEVFXLCLKLI----------DSR 171
+ V+EKL W+ RK+I G + VEV+ + +++I +S+
Sbjct: 90 ENVYEKLNEWHGVSSNRNYENDRKVIKVGKFTVRLMVEVYKVKIQIILKFSGNDTCSESK 149
Query: 172 DNSQTVIRLSKKASTRQLYEKVCKLRG---IEQEKARIWDYFNKQRSTSPLDVSD--QTL 226
T+ ++ S + + + Q + R+W ++Q L+ Q+L
Sbjct: 150 GKKYTLKDFTRFQSKADMIRDILAMNNDLYPRQGQTRVWSRESQQEKWRHLNEESLSQSL 209
Query: 227 DDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRF 286
+ L + IL E Q D+G S D V + S +S+
Sbjct: 210 YELGLHSNGHILCEFQNDDG----SWPQDAEKVENKKSLASIV----------------- 248
Query: 287 NQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQ 346
+GG GL NLGNTCFMNS +QCL LA
Sbjct: 249 ---------------------------SSRGGKCGLVNLGNTCFMNSGIQCLAAVVPLAN 281
Query: 347 YFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSG 405
YFLGD + DEINT NPLG +G+L+ AF L++ +W ++VAP K + + QFSG
Sbjct: 282 YFLGDVWKDEINTVNPLGTNGKLSTAFARLVKNMWGGAESSVAPSKVKRECGQINTQFSG 341
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
Y Q+DSQEL++ +LD LHED NRV KPYIE ++ GR DEEVA E W+NH +RN S+IV
Sbjct: 342 YGQNDSQELMSTILDALHEDQNRVINKPYIEKAEANGRHDEEVAQESWENHTSRNASVIV 401
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
D F GQ+KST+ CP C +VS+TFDPF L++PLP T+ + + + A+ P+
Sbjct: 402 DNFHGQFKSTVRCPKCGRVSVTFDPFCTLSVPLPEAATKFLPLVLVQADNISQPLRIQKA 461
Query: 526 LMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR 585
+ + DLI L K D L E+Y + + + + EL + I +++ IV +
Sbjct: 462 IKRKMTIADLISELDEFKTQK-DSVWLTTEIYTKRFHKIYMD-NELPNQISENDLIVMF- 518
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
E K PL YLE E
Sbjct: 519 -----------------------------ELKPNHNPLAIYLEYE--------------- 534
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERI 705
+++ + SAK + DE NS + +++ A++E + ++ L+ DE+
Sbjct: 535 --IKQKFESAKREQFAHPFMINVPCDE--NSKSSTLKKADVEAHIRKSMTGILNDGDEQF 590
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTD-DVHELYDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
+Q+ + + ++ D T + E + + + V K G V + I
Sbjct: 591 R----MQQVNSYSGNHGVGIIKDETVLTIDEYRSKANLVYVSTVWKNGEVVNSPSPKDIE 646
Query: 765 LFS--------CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
CL+ F EE L + WYCP CKEH+QA K + +W LP VL+ HLKRF
Sbjct: 647 TEDKANADKGICLNLFTIEEKLREGEEWYCPHCKEHQQAFKHMQIWKLPPVLILHLKRFH 706
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
Y+R ++K+ V+FP LD+S Y+ Y+L A+SNH G LGGGHYTA
Sbjct: 707 YNRIFRDKVCDMVHFPTRGLDMSPYLLGPGAGKARYNLLAVSNHMGRLGGGHYTA 761
>gi|395856541|ref|XP_003800686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Otolemur
garnettii]
Length = 936
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 237/645 (36%), Positives = 327/645 (50%), Gaps = 80/645 (12%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV D + N
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDVYN 58
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
+ + PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 59 VG-----------EHNLFPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I ++ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPADRETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STVPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P VT
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQMVVT----- 508
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
+VYNH+ + F+ L + D+ V
Sbjct: 509 ------------------------DVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSM 544
Query: 591 GGK--IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLS 633
G + L + R ++ AS G+ L+G PL+ + + L+
Sbjct: 545 DGAECVTLPVYFRERKSRASSTSSGA--VLYGQPLLISVPKHKLT 587
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H + +K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +L
Sbjct: 736 HVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKIL 795
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILN---LDLS-KYMKSKDGESYVYDLFAISNHYGGL 864
V HLKRFSY+RY ++KLDT V FP+ N +LS K ++ K+ S A+ +H
Sbjct: 796 VVHLKRFSYNRYWRDKLDTVVEFPVSNPTSRNLSVKSIEKKESNSIGDQQLAVLSHLLD- 854
Query: 865 GGGHYTAYAK 874
TAYAK
Sbjct: 855 -----TAYAK 859
>gi|341897552|gb|EGT53487.1| hypothetical protein CAEBREN_19011 [Caenorhabditis brenneri]
Length = 902
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 280/886 (31%), Positives = 432/886 (48%), Gaps = 140/886 (15%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
T DE R+++ +++ ++ E +FLIS +W+ S + V D D P
Sbjct: 28 TRDELRRLLTEVEQT---EMLENESWFLISQKWWNSLLKAVR------DGFVDDLP---- 74
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
PIDNS+I + GS +++ L E DY VP +V+++L +Y+
Sbjct: 75 ----------PIDNSNISECRQGS-----FFLKQRLAEQVDYTPVPSKVFKRLETFYQVE 119
Query: 141 PALPRK-MISEGIVNEKR---VEVFXLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCK 195
PR+ I+ +V + +EV+ + + +R+ + L + L E+V
Sbjct: 120 D--PRRDYITRQVVPKNGSLCLEVYPRIVHVALARNRDMKADVTLKSDDTMASLRERVIT 177
Query: 196 LRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGN 254
+E + R F S +P + D+ Q +L++V+ +NG N
Sbjct: 178 ELNLEANQNVR----FYVMSSDNPELIDTTQSIDSYFDTVQKVLVDVE-ENGEFFFRGKN 232
Query: 255 DLALVPIEPSRSSLTIAGGPALS------NGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
A+ P S T+ G A S GH+ +SY
Sbjct: 233 --AVQP-----QSKTLYGNQASSSSSSSLGGHSVS----------------------NSY 263
Query: 309 NTAKKGE------KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
NTA G GL NLGNTCFM SA QCL + P L YF+ + Y ++N ENP
Sbjct: 264 NTASPTHGVVTRTTPGACGLSNLGNTCFMASAFQCLSNIPPLRDYFINEEYLQDLNEENP 323
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LG HG LA+A GDL++ +WS A++ PR FKG + +FAP+F+GY+Q D+ EL+A++LDG
Sbjct: 324 LGTHGNLAVAVGDLMKGMWSGEYASINPRKFKGIIGQFAPRFNGYSQQDAHELMAYVLDG 383
Query: 422 LHEDLNRVKQKPYIEMKDSGGR-PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
LHEDLNR+K+KPYIE D + P+ E A + W+ +K RNDS+IVD GQ +STL+CPV
Sbjct: 384 LHEDLNRIKKKPYIEDNDEDAKLPEAEYAAKSWQVYKMRNDSIIVDTLHGQLRSTLICPV 443
Query: 481 CSKVSITFDPFMYLTLPLP---STVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
C K+SI FDPF YL+LPLP V +T+ V + + T T
Sbjct: 444 CQKISIKFDPFGYLSLPLPPKEQIVKQTVIVMFLNRKWAKFSLGITDT-----------T 492
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLE 597
+ A L + E L L E ++ F FF P S+ DD I+ + G +++++
Sbjct: 493 TVEEAESLML-EKLQLEEPHH---FVFFHVP----SAYHDDIAIL------QPGDRVRMQ 538
Query: 598 IVNRWQEKSASDY-LKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS-PLRRTYSSA 655
+ + D +KG+ ++F V Y + + A + + S PL R + +
Sbjct: 539 GREVYVAQVEHDLSVKGT--RIF----VAYNRVKIVKPASLPMIYSLAPGFPLTRGFLND 592
Query: 656 KAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQ--K 713
+ F+ + I N +++ + D RE ++L + D + PI
Sbjct: 593 HVFNTTKRLFINQKIATELNGNDDDSMSGNSSD--ERE-PYKLFVGDPGSQTPLPISSTN 649
Query: 714 DSILKPGK--------HIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
D I P + +++V+ W D +L++ DL T T ++ + L
Sbjct: 650 DPIPFPDEMSNDLYRNYLQVIFQWKD--IKLFNQYKGADLVEREMTVATRRR-----VLL 702
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKL 825
L+ F +E LG D WYCPQCK+H +A+K+LDLW LP++L+ HLKRF Y+++ + KL
Sbjct: 703 EETLNWFTKKEQLGEQDSWYCPQCKKHERASKQLDLWKLPEILILHLKRFQYTKWSREKL 762
Query: 826 DTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
V P+ LDL+ + + + E+ VYDL A+S HYG L GGHYTA
Sbjct: 763 TWDVVIPVRGLDLTAKVANPNHEAAVYDLIAVSRHYGSLSGGHYTA 808
>gi|443921116|gb|ELU40883.1| ubiquitin carboxyl-terminal hydrolase [Rhizoctonia solani AG-1 IA]
Length = 1005
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 274/906 (30%), Positives = 416/906 (45%), Gaps = 144/906 (15%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCG----DEPSIDNISFDSPHMN 79
+ER + + Q L+L G+ +F+IS +W++ WE V G D P I +
Sbjct: 58 QERYTMISIAKQMPLEL--GSYWFVISYKWFQVWEAAVLGTPNKDFPDITEQTL------ 109
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
GP+DN DI++ G E+ +L EG D LVP+ W+K WY G
Sbjct: 110 ----------GPVDNLDIVKPGTK-------ELLPDLVEGYDIELVPEDAWKKYVEWY-G 151
Query: 140 GPA--LPRKMI---SEGIVNEKRVEVFX--LCLKLIDSRDNSQ--TVIRLSKKASTRQLY 190
P L R++I + + E RVEV+ L+ + D + ++S A L
Sbjct: 152 QPKIELKREVIGWPTASGLPETRVEVYQPKFTTFLLTTGDGPIQCSSFQISSNAPLSTLA 211
Query: 191 EKVCKLRGIE-QEKARIWDYFNKQRSTS------------PLDVSDQTLDDAMLQMDQDI 237
+ + + + R+W+ K R + P+ ++ + ++ + +
Sbjct: 212 SQAASVLQVSPSDTFRVWNLPPKVRKSGIEAHEVERHSLIPISLTSEEPLTDFNRLGRVL 271
Query: 238 LLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
+EV+ N +D+ S++I+ P++ + N PG F
Sbjct: 272 AVEVRSANTWILDA--------------ESVSISNDPSVPVDVGAKWE-NLVPGVPFMGR 316
Query: 298 FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEI 356
+ G GLQNLGNTCFMNS LQCL+H P+L +YFL G + E+
Sbjct: 317 LPQVH------------VPRGTMGLQNLGNTCFMNSGLQCLLHIPELERYFLQGHHLAEL 364
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGR--------------AAVAPRAFKGKLARFAPQ 402
N NPLGM G++A AF L+++++ +G ++ P KG + R+AP
Sbjct: 365 NPHNPLGMEGQMAEAFNILVKQIYPAGAKPGPTTTLDPSNDYSSYVPLHLKGVVCRWAPA 424
Query: 403 FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD--------SGGRPDEEVANECWK 454
FSGY + DSQEL+ +LDGLHEDLNR+ +KPY+E + S + +A E W
Sbjct: 425 FSGYQECDSQELIGTMLDGLHEDLNRILKKPYVEKPEWPEHDRESSRAELEARIAQETWD 484
Query: 455 NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN 514
H RNDS+I D+FQG YKSTL CP C K+S+TFDPF+ L+LPLP++V+ TV++
Sbjct: 485 GHARRNDSIITDLFQGMYKSTLTCPDCGKISVTFDPFLTLSLPLPASVS-AWKHTVYFVP 543
Query: 515 GSGLP--MPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
S + + L K +DL AL ++ D ++ EV+ H+ F+FF+N + I
Sbjct: 544 WSTQKRRLAVQIELPKDSVTEDLKRALEHKLGVERDR-FVVTEVWKHKFFQFFDN-RKNI 601
Query: 573 SSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHL 632
+ + + + I+AY I + N L S F P + L E
Sbjct: 602 TEVAEKDMIIAYEL------PISVGSTNSDSAPQVVPVLHVSSNSAFALPFIVVLYPE-- 653
Query: 633 SGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELS-NSHNES-VETA-ELEDL 689
S AD + L+R PE + + SH +ET LED
Sbjct: 654 SRADYSV--------LKRLIVERYNQWVSTPDITPESFELYAYGSHGPGPMETGFRLEDS 705
Query: 690 CSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVH 749
S L D R P +K +++ + + + W D P
Sbjct: 706 LS-------DLIDLRARGQDP-KKGTLINASEALVAI--WEPDQRNRLFPREGPAFNEWQ 755
Query: 750 KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
G +++ ++ I+L CLD E LG +D WYC +CK+HRQATK+L L LP +LV
Sbjct: 756 AHGSQTRQSNKQEITLSDCLDELTKVEQLGVNDSWYCSRCKQHRQATKQLQLRSLPTILV 815
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGG-LGGGH 868
LKRF+ ++K+D V FP+ LDLS + + E YDLFA+ H + GH
Sbjct: 816 LQLKRFAK----RSKIDRLVTFPLDGLDLSDRV---EDEGCTYDLFAVDEHKSNVMSSGH 868
Query: 869 YTAYAK 874
YT AK
Sbjct: 869 YTTRAK 874
>gi|326669890|ref|XP_002663119.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Danio rerio]
Length = 990
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 321/617 (52%), Gaps = 90/617 (14%)
Query: 30 QDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERP 89
+++ N + L+ G+ ++L+ RWY W+ YV D+ N S P
Sbjct: 21 REIDNLNQQQLRAGDSWYLLDKRWYDQWKEYV------------DTGDQNSTS-----YP 63
Query: 90 GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK---GGPALPRK 146
G IDN+++ + + D ++ L E D++LVP + W KL WY P L RK
Sbjct: 64 GKIDNTELYE------DLDSYRLKERLTENDDFILVPAEAWRKLLSWYDMMDNQPPLERK 117
Query: 147 MISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI-RLSKKASTRQLYEKVCKLRGI-EQEKA 204
++ + + +VEV+ + + L S + TV + S+ +++K+ + + E ++
Sbjct: 118 VVD--LPSTVKVEVYPVEIYLCLSSNLESTVTAQFSRADKIHAIHQKIRQHFDVSETAES 175
Query: 205 RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPS 264
R+W + S+ L + T+ D+ L +++E++ +G
Sbjct: 176 RLW-MRSVDTSSERLRNLNMTVLDSCLSSGMTVIMEIRNADGT----------------- 217
Query: 265 RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQN 324
+P S M DSY G+ GL N
Sbjct: 218 ------------------------WPTSR--PQIMRNSADEDSYRGPP-----GVCGLTN 246
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSG 383
LGNTCFMNSALQCL +TP L +YFL + Y +E+N NPLGM GE+A A+ D+++++WS
Sbjct: 247 LGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADVIKQMWSGR 306
Query: 384 RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR 443
+V PR FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K YIE++D+ GR
Sbjct: 307 HYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYIELRDADGR 366
Query: 444 PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVT 503
PD+EVA E W+NH RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YL++PLP +
Sbjct: 367 PDQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECNKVSVTFDPFCYLSVPLPVSKE 426
Query: 504 RTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFR 563
R M V + + P + + + K G DL ALS A + ++ + + +V+NH+ +R
Sbjct: 427 RVMEVFYVSLDPTAKPTQYRLIVPKAGRVLDLCTALSQATGVPPNQ-MTVTDVFNHRFYR 485
Query: 564 FFENPAELISSIKDDEHIVAYRFDR----KQGGKIKLEIVNRWQEKSASDYLKGSER--- 616
+++ E +S I D + I Y+ + ++ L I R + DY GS
Sbjct: 486 IYQS-DESLSCILDRDDIFVYQLSSGCVDEDSDEVVLSIYMR-ERSHYRDYGSGSNSYGT 543
Query: 617 KLFGAPLVTYLEEEHLS 633
LFG PL + H +
Sbjct: 544 SLFGHPLRMSVPRAHCT 560
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 96/161 (59%), Gaps = 20/161 (12%)
Query: 725 VLLDWTDDVHELY-----DPSYIK--DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
+ +DW D+ + Y YIK + V H+ Q + L C++ F T E
Sbjct: 761 IAIDWDPDMKKKYYNENEAEKYIKHQSMDVPHQ---------QTTVQLQECIELFTTVET 811
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLD 837
L ++ WYCP CK H+ ATKKLDLW LP+VL+ HLKRFSY++Y + KLDT V FP+ +LD
Sbjct: 812 LEEENPWYCPTCKRHQLATKKLDLWSLPEVLIIHLKRFSYTKYSREKLDTIVEFPLRDLD 871
Query: 838 LSKYMKSKDGESY----VYDLFAISNHYGGLGGGHYTAYAK 874
S ++ K S YDL ++SNHYGGL GHYT+YA+
Sbjct: 872 FSGFLLKKTVNSTEPPCPYDLISVSNHYGGLRDGHYTSYAR 912
>gi|449501245|ref|XP_004161317.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 5-like, partial [Cucumis sativus]
Length = 468
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/418 (46%), Positives = 275/418 (65%), Gaps = 16/418 (3%)
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
GQYKSTLVCPVC+KVS+TFDPFMYL+LPL ST TRTMTVTVF ++GS P TVT+ K
Sbjct: 1 GQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTTRTMTVTVFTSDGSKRPSTLTVTVPKQ 60
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
G C+DLI AL+ C L+ E LLLAEV +H + RF E+P +S+IKDD+HI AY+ +
Sbjct: 61 GRCRDLIQALNGTCSLRHSEKLLLAEVRDHLVHRFLEDPLISLSTIKDDDHIAAYKIPKL 120
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGAD-IDIAVSKLLSPL 648
L++V+R QE+ SD S + FG PLV+ + E D + V + LSPL
Sbjct: 121 TKNAKYLQLVHRSQEQVTSDADIMSGWRPFGTPLVSVVSCEGPVKKDYLQRIVKRALSPL 180
Query: 649 RRTYS--------SAKAHGGKENGFLPEVIDELSNSHN-ESVETAELEDLCSRELSFQLS 699
+ + S+ +H G++ + ++S N + ++ +E +L QL
Sbjct: 181 AKIGTLMDTDVSDSSMSHAGEDLHHHDSSAETCTSSLNSDDPKSKAMEPF---KLPLQL- 236
Query: 700 LTDERISSCKPIQKDSI-LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT 758
L +E + ++++ L P + V +DW+ + + +D Y+++LP V K+G +KK
Sbjct: 237 LNEENVCIELSSGEEAVKLPPSSSVLVYIDWSQKLLKKFDTGYLENLPEVFKSGPVMKKA 296
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R E +SL+SCL++FL EEPL P+DMW+CPQCKE RQA+KKLDLW LP+VLV HLKRFSYS
Sbjct: 297 RTEPLSLYSCLESFLREEPLVPEDMWFCPQCKERRQASKKLDLWRLPEVLVIHLKRFSYS 356
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
R +K+KL+TFVNFPI + DL+ Y+ +K + + +Y+L+A++NHYG +G GHYTA+ K+
Sbjct: 357 RSMKHKLETFVNFPIHDFDLTNYVANKNNSQRQLYELYALTNHYGSMGSGHYTAHIKL 414
>gi|353238811|emb|CCA70745.1| related to UBP12-ubiquitin C-terminal hydrolase [Piriformospora
indica DSM 11827]
Length = 1142
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 307/595 (51%), Gaps = 77/595 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
+G++++LIST W W+R +CG + G S + +DNSD++
Sbjct: 103 FTQGDVWYLISTTWLDKWKR-ICGPQ-----------QYRGDESSLSA----VDNSDLV- 145
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPAL--PRKMISEGIVNEKR 157
+ +G+ + L EG Y L+ ++ W+ WY G P L PRK+I+EGI + KR
Sbjct: 146 DEHGT-------LLPALAEGTKYELICKEAWDLFVEWY-GPPNLTIPRKIITEGIHHVKR 197
Query: 158 VEVFXLCL------KLIDSRDNSQT-VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYF 210
VEV+ L KL ++ T I +S+ A ++L ++V ++ ++++ R W
Sbjct: 198 VEVYPYKLSVFRMSKLTPPSSHAVTPTIEISRAAKVKELIDQVVQISALDKDDLRFWLIM 257
Query: 211 NKQRSTSPLDVS---------------------DQTLDDAMLQMDQDILLEVQVDNGISM 249
T PLD + D+ LD+A+++ I+ E ++ ++
Sbjct: 258 GTVLETKPLDGTFYPSDRLQADEAQPFPPAESLDKRLDEALVESGDAIVYEYRIQGTWTV 317
Query: 250 D-------STGNDLALVPIEPS-----RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
D +T N +P+ ++ A+ TTGY GS+ +
Sbjct: 318 DIDSLKIATTNNRTLAAENKPAFFTDLKTKYNSPANNAIKPMSTTGYTITPTVGSTAVTA 377
Query: 298 FMD--MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSD 354
F +Y T + G GL NLGNTCFMNSALQCL HTP+L +YFL G Y
Sbjct: 378 FKQPSTTTSISAYTTPSR--PPGAVGLNNLGNTCFMNSALQCLAHTPELTEYFLTGVYRT 435
Query: 355 EINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQEL 414
E+N NPLGM G +A FG +L KLW AVAPR FK +L RFAPQFSGY QHD+QE
Sbjct: 436 ELNPTNPLGMKGAIAEVFGGVLDKLWHPISYAVAPREFKQQLQRFAPQFSGYAQHDTQEF 495
Query: 415 LAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQ 471
LAFLLDGLHEDLNRV +KPY+E D G ++E+ A W+ +K RNDS+IVD+FQGQ
Sbjct: 496 LAFLLDGLHEDLNRVLKKPYVENPDWNGGGEKELVKHAATAWEGYKKRNDSVIVDLFQGQ 555
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
YKSTLVCP C KVSITFDPFMYLTLPLP + + + V L K
Sbjct: 556 YKSTLVCPECEKVSITFDPFMYLTLPLPVLRIWEHEICWVPYDVEKPRLQIPVQLSKDAS 615
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
KDL L + + E + E + H++++ F++ L I D + IV Y
Sbjct: 616 IKDLKLLMKKWMGTPV-ENQICIETFGHKVYKDFDDTNPL-GEIADRDTIVIYEL 668
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 22/137 (16%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ I+L CLD F EE LG DD+WYCP+CK+H+QATKK +LW PDVLV HLKRFS SR
Sbjct: 931 ERGITLEDCLDEFTKEERLGEDDLWYCPRCKKHQQATKKFELWKTPDVLVVHLKRFSNSR 990
Query: 820 YLKNKLDTFVNFPILNLDLSKYM---------------------KSKDG-ESYVYDLFAI 857
L++K+D FV+FPI LDL++ + +S+ G +S VYDLFA+
Sbjct: 991 LLRDKIDAFVDFPIEGLDLTERVEERLVAKKWVEEGHELEELGLQSESGDQSLVYDLFAV 1050
Query: 858 SNHYGGLGGGHYTAYAK 874
H GGLGGGHY AYAK
Sbjct: 1051 DEHLGGLGGGHYRAYAK 1067
>gi|403275332|ref|XP_003929404.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Saimiri
boliviensis boliviensis]
Length = 1536
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 257/824 (31%), Positives = 393/824 (47%), Gaps = 139/824 (16%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 500 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 559
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 560 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 619
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+ +Q +Q
Sbjct: 620 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLEYLKIQDEQH 678
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
++ ++V N D++ P E S
Sbjct: 679 LV--IEVRN--------KDMSW-PEEMS-------------------------------- 695
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 696 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 751
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 752 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 811
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 812 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 871
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 872 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 930
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRFFEN-------------------PAELISSIK 576
LS C L E +LLAEV+ I F ++ PA IS+
Sbjct: 931 KKQLSDLCGLN-SEQILLAEVHGSNIKNFPQDNQKVRLSVSGFLCAFEIPVPASPISASS 989
Query: 577 DDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERK--LFGAPLV----TYLEEE 630
+ V D GK K + N ++ +L + + LFG PL+ + ++
Sbjct: 990 PTQTEVTV-LDSVFRGKEKEKKTNGRTMRTELYFLSSQKNRPSLFGMPLIVPCTVHTRKK 1048
Query: 631 HLSGADIDIAVSKLLSPLRRTYSSAKAHG-----GKENGFLPEVIDELSNSHNESVETAE 685
L A + I VS+L SPL +S A G + F V+ + NS
Sbjct: 1049 DLYDA-VWIQVSRLASPLPPQEASNHAQDCDDSMGYQYPFTLRVVQKDGNS--------- 1098
Query: 686 LEDLCSRELSFQLSLTDERISSCK-PIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKD 744
C+ ++ CK +D +I V DW L + +
Sbjct: 1099 ----CAWCPWYRFC------RGCKIDCGEDRAFIGNAYIAV--DWDPTALHLRYQTSQER 1146
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
+ H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW L
Sbjct: 1147 VVDEHESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRL 1206
Query: 805 PDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
P +L+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1207 PPILIIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1248
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV S+ I F SP
Sbjct: 357 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV-KYVISLAAIIFSSPE 415
Query: 78 MN 79
++
Sbjct: 416 LS 417
>gi|432959676|ref|XP_004086360.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like [Oryzias
latipes]
Length = 1014
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 213/604 (35%), Positives = 310/604 (51%), Gaps = 98/604 (16%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNS 95
+ +L+ G+ ++++ RW+ W + GD+ ++ SF PG IDN+
Sbjct: 28 ECELRAGDSWYVVDRRWFEQWREFAETGDQ---NSSSF---------------PGQIDNT 69
Query: 96 DIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMI---S 149
++ ++ D ++ L E +D+VLVP + W KL WY G P L RK++ S
Sbjct: 70 ELFEDL------DSYRLKERLVENEDFVLVPAEAWHKLLAWYGMVDGQPPLERKVVDLPS 123
Query: 150 EGIVNEKRVEVFXLCLKLIDSRDNSQTVI--RLSKKASTRQLYEKVCKLRGIEQ-EKARI 206
V VE+F LCL N VI + S+ + + +C+ + + R+
Sbjct: 124 TLKVEVYPVEIF-LCL-----HSNMDNVITDQFSRTDNIHAIQTAMCRAFSVPPGSECRL 177
Query: 207 WDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRS 266
W + +V LD A L +++E++ +G
Sbjct: 178 WMKSSDSSCERLRNVHISVLD-ACLSSGMTVIMEMRNSDGT------------------- 217
Query: 267 SLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLG 326
+P SS + + DSY +G+ G + GL NLG
Sbjct: 218 ----------------------WP-SSRPQIMRNSVEEQDSY----RGQPG-VCGLTNLG 249
Query: 327 NTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
NTCFMNSALQCL +TP L +YFL + Y DE+N NPLGM GE+A A+ D+++++WS
Sbjct: 250 NTCFMNSALQCLSNTPPLTEYFLQNSYLDELNFTNPLGMKGEIAEAYADVIKQMWSGRHY 309
Query: 386 AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPD 445
+V PR FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK K YIE++D+ GRPD
Sbjct: 310 SVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDADGRPD 369
Query: 446 EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRT 505
+EVA E W+NH+ RNDS+IVD F G +KSTLVCP C KVS+TFDPF YL++PLP + R
Sbjct: 370 QEVAGEAWRNHRRRNDSVIVDKFHGLFKSTLVCPECHKVSVTFDPFCYLSVPLPVSKERV 429
Query: 506 MTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFF 565
M V + + P+ V + K G DL ALS + + +++A+V+NH+ ++ +
Sbjct: 430 MEVFFVFLDPHAKPVQHRVVVPKAGKVSDLCAALSDMTSVAPTQ-MVVADVFNHRFYKIY 488
Query: 566 ENPAELISSIKDDEHIVAYRFDRKQGGK-----IKLEIVNRWQEKSASDYLKGSERKLFG 620
N E +S I D + I Y QG + + L + R + LFG
Sbjct: 489 -NADESLSCILDRDDIFVYEL--AQGPQEEQVLLALYLRERSHYRDYGSGSSSYGTSLFG 545
Query: 621 APLV 624
PL+
Sbjct: 546 HPLL 549
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 6/154 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V +DW D+ + + + V H + ++ Q + L C++ F T E L ++ W
Sbjct: 780 VAIDWDPDMKKRFYNENEAEKYVKHSSMEVPQQ--QATVQLQECIELFTTVETLEEENPW 837
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YCP CK+H+ ATKKLDLW LP+VL+ HLKRFSY+++ + KLD+ V+FP+ +LD S ++
Sbjct: 838 YCPVCKKHQLATKKLDLWSLPEVLIIHLKRFSYTKFTREKLDSIVDFPLRDLDFSDFLLR 897
Query: 845 KDGES----YVYDLFAISNHYGGLGGGHYTAYAK 874
K S YDL A+SNHYGGL GHYT+YAK
Sbjct: 898 KSLSSEEPPSRYDLIAVSNHYGGLRDGHYTSYAK 931
>gi|66800105|ref|XP_628978.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60462340|gb|EAL60562.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1085
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 279/544 (51%), Gaps = 88/544 (16%)
Query: 22 PDEERQIVQDLKNQ-SDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
PD R+ +Q LK + L G + +IS +WY W +
Sbjct: 121 PDLTREDIQKLKKEIKQTSLVVGEKWAIISNKWYSKWSEEI------------------- 161
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
E GPI N DI+QNG E+R + E + LVP++ W KL Y GG
Sbjct: 162 ---NSREELGPITNDDILQNG---------ELRPGISETTSFTLVPEKTWIKLKEVYGGG 209
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST-RQLYEKVCKLRGI 199
P + RK+I G +N + LK S D S V + K T + + E+ CK+ +
Sbjct: 210 PEIIRKVI-RGTINNNIDLRIPISLKFFKSSDTSNIVQGFAFKNETIKVMKERACKVFNL 268
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALV 259
+ RIWD++N+ + D+ + + ++ L DQ ILLE ++ NG
Sbjct: 269 DPINIRIWDFYNQTKHAELKDL--EYVSNSRLLEDQLILLEEKLANG------------- 313
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
++P D Y S NT + G+
Sbjct: 314 ----------------------------KWP--------QQQSDRYSSGNTRCGDPRPGI 337
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTCFMNSALQCL +T L +YFL Y ++IN NPLG HG+LA + +L+ +
Sbjct: 338 TGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAELITE 397
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+W ++V PR FKG++ RFAPQF+GY+QHDSQELLAFLLDGLHEDLN+VK+KP+ E K
Sbjct: 398 IWEGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGLHEDLNKVKKKPFHEGK 457
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
D GRPD+ +A E W+ HK+RN+S+IVD FQ Q KS LVCPVC +SITFDPFMYL+LPL
Sbjct: 458 DYDGRPDDVIAKEQWEMHKSRNNSVIVDWFQSQLKSKLVCPVCQNISITFDPFMYLSLPL 517
Query: 499 PSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYN 558
PS + + + N +++ + DL+ LS + + + +Y+
Sbjct: 518 PSETIKQFNFS--FLNKDFKITQHEISVSSNATVGDLLKKLSEEVGVSHNNMVFTVIMYS 575
Query: 559 HQIF 562
+I+
Sbjct: 576 LKIY 579
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 719 PGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPL 778
P + ++ L W +D + +D I + ++++G Q ++L C+ F TEE L
Sbjct: 792 PLRTREITLAW-EDPSQYFDYETISN--DLNRSGGCRDIPMQREVNLEQCIKLFTTEEQL 848
Query: 779 GPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL 838
GP+D WYC +CKEH++ATKK D+W P +LV HLKRFSY R ++KLDT V FP +LDL
Sbjct: 849 GPEDPWYCSKCKEHQRATKKFDIWSSPPILVVHLKRFSYKRSHRDKLDTLVKFPFKDLDL 908
Query: 839 SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
S+Y+ +KD + +YDLFA+SNHYG LGGGHYTA+A
Sbjct: 909 SQYVLNKDQPAPIYDLFAVSNHYGSLGGGHYTAFA 943
>gi|164663834|ref|NP_663603.3| ubiquitin carboxyl-terminal hydrolase 11 [Mus musculus]
gi|342187159|sp|Q99K46.4|UBP11_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|148668416|gb|EDL00740.1| ubiquitin specific peptidase 11, isoform CRA_a [Mus musculus]
Length = 921
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 320/627 (51%), Gaps = 94/627 (14%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + Q Q + N + L+ G +FL+ WY+ WE YV G + D +F
Sbjct: 28 PDLDEQWRQ-IGNGRERPLRAGESWFLVEKHWYKQWEVYVKGGDQ--DASTF-------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+N+ + ++ +R L EG DYVL+P W + WY
Sbjct: 77 -------PGCINNAGLFEDQIS------WHLRERLLEGDDYVLLPAPAWNYMVSWYGLMD 123
Query: 139 GGPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKL 196
G P + RK+I GI ++VEV+ L L L+ D + I+ S S + + +
Sbjct: 124 GQPPIERKVIELPGI---RKVEVYPLELLLVQHSDMETALTIQFSYTDSVELVLQTAREQ 180
Query: 197 RGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 181 FLVEPQEDTRLWTK-NSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDG--------- 230
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+ S + G N P D D+ +
Sbjct: 231 --------TWPSAQLCG-------------MNNIP---------DEDEDFQG-------- 252
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ D
Sbjct: 253 QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYAD 312
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y
Sbjct: 313 LVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 372
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL
Sbjct: 373 VELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYL 432
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
++PLP R + V + P V + K G DL +ALST + D+ +++A
Sbjct: 433 SVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVA 491
Query: 555 EVYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSAS 608
+V++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 492 DVFSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPS 548
Query: 609 DYLKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 549 RDYNNSYYGLILFGHPLLVSVPRDRFS 575
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D+ Y + V H G+ +KK+ + L C+ F T E L ++
Sbjct: 702 IAMDWEPDMKRRYYDEVEAEGYVKHDCVGYMLKKS---PVQLKECIKLFTTVETLEKENP 758
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S+ + KLDT V FPI +LD S+++
Sbjct: 759 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVI 818
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 819 KPKNESSPDLYKYDLIAVSNHYGGMRDGHYTTFA 852
>gi|348553563|ref|XP_003462596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 2
[Cavia porcellus]
Length = 929
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 220/631 (34%), Positives = 330/631 (52%), Gaps = 103/631 (16%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
D++ +++ ++ + L+ G +FL+ RWY+ WE YV G + D +F
Sbjct: 31 DDQWNQIENGESGRERPLRAGESWFLVEQRWYKQWEVYVQGGDQ--DASTF--------- 79
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
PG I+N+++ ++ ++ L EG+DYVL+P W L WY G
Sbjct: 80 ------PGCINNAELFEDQINWC------LKEGLMEGEDYVLLPSAAWHYLVSWYGLEPG 127
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P + RK+I + + +VEV+ + L L+ D T + L+ + S ++V +
Sbjct: 128 QPPIERKVIE--LYSIPKVEVYPVKLLLVQHGD---TDLVLTAQFSLTDSVDQVLRTARE 182
Query: 200 E-----QEKARIWDYFNKQRSTSPLDV---SDQTLDDAMLQMDQDILLEVQVDNGISMDS 251
+ QE R+W ++S LD + TL DA L+ Q I++E++ +G S S
Sbjct: 183 QFLVDAQEDTRLW----VKKSEGYLDRLFNTHVTLLDAALESGQLIIMEIRNKDG-SWPS 237
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
T L +V S + D+ +
Sbjct: 238 T--QLRVV------------------------------------SRMSEEDEDFQG---- 255
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA
Sbjct: 256 ----QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAE 311
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ DL+++ WS ++ P FK K+ RFA QF GY QHDSQELL+FLLDGLHEDLNRVK
Sbjct: 312 AYADLVKQTWSGCHRSIVPNVFKNKVGRFASQFLGYQQHDSQELLSFLLDGLHEDLNRVK 371
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDP
Sbjct: 372 KKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDP 431
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F YL++PLP R + V + P V + K G DL +ALS + D+
Sbjct: 432 FCYLSVPLPVCHKRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCMALSKHTGIAADK- 490
Query: 551 LLLAEVYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQE 604
+++ +V++H+ ++ + E+P +S I D + I Y R + +G K + + +E
Sbjct: 491 MIVTDVFSHRFYKLYQLEDP---LSGILDRDDIFVYEVSGRIEPIEGSKDDIVVPVYLRE 547
Query: 605 KSASDYLKGSERK--LFGAPLVTYLEEEHLS 633
++ + S LFG PL+ + ++ LS
Sbjct: 548 RTPAQDYNNSYYGLILFGHPLLVSVPQDRLS 578
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H+ G+ +KK + L C++ F T E L ++
Sbjct: 710 IAMDWEPEMKRRYYDEAEAEGYVKHECVGYVLKKA---PVQLQECIELFTTVETLEKENP 766
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP++L+ HLKRFS+S++ KLDT V+FPI +LD S+++
Sbjct: 767 WYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTLVHFPIRDLDFSEFVI 826
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 827 KPQNESAPELYKYDLIAVSNHYGGIRDGHYTTFA 860
>gi|76443681|ref|NP_001008861.2| ubiquitin carboxyl-terminal hydrolase 11 [Rattus norvegicus]
gi|60422774|gb|AAH90333.1| Ubiquitin specific peptidase 11 [Rattus norvegicus]
gi|149044387|gb|EDL97708.1| ubiquitin specific protease 11 [Rattus norvegicus]
Length = 921
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 320/627 (51%), Gaps = 94/627 (14%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD ++Q Q + N + L+ G +FL+ WY+ WE YV G + D +F
Sbjct: 28 PDLDQQWRQ-IGNGRERPLRAGESWFLVEKHWYKQWEAYVKGGDQ--DASTF-------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+NS + ++ +R L EG DYVL+P W L WY
Sbjct: 77 -------PGSINNSGLFEDQIS------WHLRERLVEGDDYVLLPAPAWNYLVSWYGLKD 123
Query: 139 GGPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKL 196
P + RK+I GI ++VEV+ + L L+ D + I+ S S + + +
Sbjct: 124 DQPPIERKVIELPGI---RKVEVYPIELLLVQHSDMETALTIQFSYSDSVDLVLQTAREQ 180
Query: 197 RGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 181 FLVEPQEDTRLWTK-NSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDG--------- 230
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+ S + G N P D D+ +
Sbjct: 231 --------TWPSAQLCG-------------MNNMP---------DEDEDFQG-------- 252
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ D
Sbjct: 253 QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYAD 312
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y
Sbjct: 313 LVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 372
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL
Sbjct: 373 VELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYL 432
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
++PLP R + V + P V + K G DL +ALST + D+ +++A
Sbjct: 433 SVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVA 491
Query: 555 EVYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSAS 608
+V++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 492 DVFSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPS 548
Query: 609 DYLKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 549 RDYNNSYYGLILFGHPLLVSVPRDRFS 575
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H G+ +KK + L C+ F T E L ++
Sbjct: 702 IAMDWEPEMKRRYYDEVEAEGYVKHDCVGYMLKKN---PVQLKECIKLFTTVETLEKENP 758
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S++ + KLDT V FPI +LD S+++
Sbjct: 759 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFVI 818
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 819 KPKNESAPDLYKYDLIAVSNHYGGMRDGHYTTFA 852
>gi|166240137|ref|XP_001733062.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988448|gb|EDR41009.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1021
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 279/544 (51%), Gaps = 88/544 (16%)
Query: 22 PDEERQIVQDLKNQ-SDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
PD R+ +Q LK + L G + +IS +WY W +
Sbjct: 57 PDLTREDIQKLKKEIKQTSLVVGEKWAIISNKWYSKWSEEI------------------- 97
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
E GPI N DI+QNG E+R + E + LVP++ W KL Y GG
Sbjct: 98 ---NSREELGPITNDDILQNG---------ELRPGISETTSFTLVPEKTWIKLKEVYGGG 145
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST-RQLYEKVCKLRGI 199
P + RK+I G +N + LK S D S V + K T + + E+ CK+ +
Sbjct: 146 PEIIRKVI-RGTINNNIDLRIPISLKFFKSSDTSNIVQGFAFKNETIKVMKERACKVFNL 204
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALV 259
+ RIWD++N+ + D+ + + ++ L DQ ILLE ++ NG
Sbjct: 205 DPINIRIWDFYNQTKHAELKDL--EYVSNSRLLEDQLILLEEKLANG------------- 249
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
++P D Y S NT + G+
Sbjct: 250 ----------------------------KWP--------QQQSDRYSSGNTRCGDPRPGI 273
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTCFMNSALQCL +T L +YFL Y ++IN NPLG HG+LA + +L+ +
Sbjct: 274 TGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAELITE 333
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+W ++V PR FKG++ RFAPQF+GY+QHDSQELLAFLLDGLHEDLN+VK+KP+ E K
Sbjct: 334 IWEGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGLHEDLNKVKKKPFHEGK 393
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
D GRPD+ +A E W+ HK+RN+S+IVD FQ Q KS LVCPVC +SITFDPFMYL+LPL
Sbjct: 394 DYDGRPDDVIAKEQWEMHKSRNNSVIVDWFQSQLKSKLVCPVCQNISITFDPFMYLSLPL 453
Query: 499 PSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYN 558
PS + + + N +++ + DL+ LS + + + +Y+
Sbjct: 454 PSETIKQFNFS--FLNKDFKITQHEISVSSNATVGDLLKKLSEEVGVSHNNMVFTVIMYS 511
Query: 559 HQIF 562
+I+
Sbjct: 512 LKIY 515
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 87/114 (76%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
Q ++L C+ F TEE LGP+D WYC +CKEH++ATKK D+W P +LV HLKRFSY R
Sbjct: 766 QREVNLEQCIKLFTTEEQLGPEDPWYCSKCKEHQRATKKFDIWSSPPILVVHLKRFSYKR 825
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
++KLDT V FP +LDLS+Y+ +KD + +YDLFA+SNHYG LGGGHYTA+A
Sbjct: 826 SHRDKLDTLVKFPFKDLDLSQYVLNKDQPAPIYDLFAVSNHYGSLGGGHYTAFA 879
>gi|348553561|ref|XP_003462595.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 1
[Cavia porcellus]
Length = 956
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 219/628 (34%), Positives = 328/628 (52%), Gaps = 97/628 (15%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
D++ +++ ++ + L+ G +FL+ RWY+ WE YV G + D +F
Sbjct: 71 DDQWNQIENGESGRERPLRAGESWFLVEQRWYKQWEVYVQGGDQ--DASTF--------- 119
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
PG I+N+++ ++ ++ L EG+DYVL+P W L WY G
Sbjct: 120 ------PGCINNAELFEDQINWC------LKEGLMEGEDYVLLPSAAWHYLVSWYGLEPG 167
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI-RLSKKASTRQLYEKVCKLRG 198
P + RK+I + + +VEV+ + L L+ D + + S S Q+ +
Sbjct: 168 QPPIERKVIE--LYSIPKVEVYPVKLLLVQHGDTDLVLTAQFSLTDSVDQVLRTAREQFL 225
Query: 199 IE-QEKARIWDYFNKQRSTSPLDV---SDQTLDDAMLQMDQDILLEVQVDNGISMDSTGN 254
++ QE R+W ++S LD + TL DA L+ Q I++E++ +G S ST
Sbjct: 226 VDAQEDTRLW----VKKSEGYLDRLFNTHVTLLDAALESGQLIIMEIRNKDG-SWPST-- 278
Query: 255 DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG 314
L +V S + D+ +
Sbjct: 279 QLRVV------------------------------------SRMSEEDEDFQG------- 295
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+
Sbjct: 296 -QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLDNRYLEELNFRNPLGMRGELAEAYA 354
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
DL+++ WS ++ P FK K+ RFA QF GY QHDSQELL+FLLDGLHEDLNRVK+K
Sbjct: 355 DLVKQTWSGCHRSIVPNVFKNKVGRFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 414
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF Y
Sbjct: 415 YVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCY 474
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLL 553
L++PLP R + V + P V + K G DL +ALS + D+ +++
Sbjct: 475 LSVPLPVCHKRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCMALSKHTGIAADK-MIV 533
Query: 554 AEVYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSA 607
+V++H+ ++ + E+P +S I D + I Y R + +G K + + +E++
Sbjct: 534 TDVFSHRFYKLYQLEDP---LSGILDRDDIFVYEVSGRIEPIEGSKDDIVVPVYLRERTP 590
Query: 608 SDYLKGSERK--LFGAPLVTYLEEEHLS 633
+ S LFG PL+ + ++ LS
Sbjct: 591 AQDYNNSYYGLILFGHPLLVSVPQDRLS 618
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H+ G+ +KK + L C++ F T E L ++
Sbjct: 737 IAMDWEPEMKRRYYDEAEAEGYVKHECVGYVLKKA---PVQLQECIELFTTVETLEKENP 793
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP++L+ HLKRFS+S++ KLDT V+FPI +LD S+++
Sbjct: 794 WYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTLVHFPIRDLDFSEFVI 853
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 854 KPQNESAPELYKYDLIAVSNHYGGIRDGHYTTFA 887
>gi|336368311|gb|EGN96654.1| hypothetical protein SERLA73DRAFT_111301 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1271
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 232/656 (35%), Positives = 342/656 (52%), Gaps = 86/656 (13%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERP-G 90
+K Q + G ++LI+ WY+ W C E ID K E+ G
Sbjct: 87 IKQQRGRSMVIGETWYLIARPWYKRWS-IAC--EGIIDK-----------DGKVEEKDLG 132
Query: 91 PIDNSDII-QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA--LPRKM 147
P+DN+ ++ ++GN V +L EG D VPQ W+ L WY G P+ LPR +
Sbjct: 133 PVDNTPLLDKDGN---------VVSSLLEGVDVEFVPQHAWDALVTWY-GEPSHSLPRTV 182
Query: 148 ISEGIVNEKRVEVFXLCLKLIDSRDNS--------QTVIRLSKKASTRQLYEKVCKLRGI 199
I+ GI++E +E+ LK + +D + +S S ++L + K I
Sbjct: 183 IARGILHEPVLELRPPRLKALLLQDTPSEKPIGPPHPYVTMSTTGSVKELSTALVKAVSI 242
Query: 200 EQEKA-RIW-----DYFNKQRSTSPL--------DVSDQTLDDAMLQMDQDILLEVQVDN 245
A RIW D+ Q + L D +DQ+L+DA ++ D ++E Q +
Sbjct: 243 RTNAAYRIWKVEPGDFDGLQYPAAKLAQDGAVLLDDNDQSLEDACIEPDDPFVIEFQENG 302
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGG---PALSNGHTTGYRF-NQYPGSSFGSTFMDM 301
+D++ +P + SSL G P S+ R N+ P + + +
Sbjct: 303 NWIVDAS-----RIPKSNASSSLASPNGVPPPLFSSDDDFFSRLGNKLPSAQASQSTPTL 357
Query: 302 DDGYDSYNTAKKG-EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTE 359
+ S ++KK + G GL N+GNTCFMNSALQCL H +L YF+ G Y DE+N +
Sbjct: 358 SAPFQSLKSSKKAVQDPGTLGLGNMGNTCFMNSALQCLAHLEELTDYFISGVYQDELNPD 417
Query: 360 NPLGMHGELALAFGDLLRKLWS--SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
NPLGMHG +A AFG LL+++W+ S + +PR FK +L RFAPQFSGY QHDSQEL+AF
Sbjct: 418 NPLGMHGAIAEAFGSLLQRIWATNSPSTSYSPREFKQQLQRFAPQFSGYQQHDSQELVAF 477
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYKS 474
LLDGLHEDLNRV +KPY+E D G D E +A + W+ + RNDS+IVD+FQGQY+S
Sbjct: 478 LLDGLHEDLNRVLKKPYVEKPDWEGGGDLELAQLAQKSWEGYMQRNDSVIVDLFQGQYQS 537
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA--NGSGLPMPFTVTLMKHGCC 532
TLVCP C KVSITFDPFMYLTLPLP V + TVFY + S + V + +
Sbjct: 538 TLVCPECQKVSITFDPFMYLTLPLP--VQKKWRHTVFYVPWDISKPHVRVPVEIGRDASF 595
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF--DRKQ 590
K+L + L K E LL E+++++ ++ ++ + L + D++ IV + + +Q
Sbjct: 596 KELRILLGRWMGTK-PENLLTLEIFSNRFYKNLDD-SILCGEMSDNDVIVCFELPCNSRQ 653
Query: 591 GGKIKLE----------IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGAD 636
G K + + + + A +Y +G +FG P + +++E D
Sbjct: 654 GRSYKAQNDDPFIFPVILTDVPPIRPAYNYNRGP--TMFGYPFIVVIDQEQAKSLD 707
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 85/133 (63%), Gaps = 20/133 (15%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ ISL CL F EE LG DD+WYCPQCK+H+QATKK DLW PD+LV HLKRFS SR
Sbjct: 906 KGISLNDCLAEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWKAPDILVVHLKRFSNSRA 965
Query: 821 LKNKLDTFVNFPILNLDL-----SKYMKSKDGESYV---------------YDLFAISNH 860
L++K+DTFV+FPI L L + + +K ES V YDLFA+ H
Sbjct: 966 LRDKIDTFVDFPIQGLHLEHMIGERKIATKLAESGVDTRELGLDDLDEPLTYDLFAVDEH 1025
Query: 861 YGGLGGGHYTAYA 873
GGLGGGHY AYA
Sbjct: 1026 LGGLGGGHYRAYA 1038
>gi|325186982|emb|CCA21526.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 1312
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 206/601 (34%), Positives = 316/601 (52%), Gaps = 65/601 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD------YSDEINTENPLGMHGELALA 371
G+ GLQNLGN+CF+NS LQCL H L YF Y EIN ENPLGMHG++A+A
Sbjct: 624 GVVGLQNLGNSCFLNSMLQCLTHAEPLYAYFSAQRAGQLLYELEINAENPLGMHGKIAIA 683
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
F LL ++SS +AP K + ++APQF+GY+Q DSQE++ FLLDGLHEDLNRV+Q
Sbjct: 684 FAKLLSDMYSSNARVIAPIDLKYVIGQYAPQFAGYSQQDSQEVMNFLLDGLHEDLNRVRQ 743
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV--CSKVSITFD 489
KP EM + G+ D +A E W+ K RNDS+IVD F GQ +S + C C SITFD
Sbjct: 744 KPQTEMIEGNGKNDATIAMEAWQQFKRRNDSVIVDHFIGQLRSHVTCSNQDCGHKSITFD 803
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PFM L++P+P++ T + +F+A+G +P F V + K ++ + AL + + +
Sbjct: 804 PFMSLSVPIPTSETNEVIAQIFWADGE-IPTKFGVKVSKTASMQEFLRALGSLANVSTNR 862
Query: 550 GLLL---------AEVY-NHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIV 599
+ + +VY + Q R + ++++ A+ + +K
Sbjct: 863 LIAIDILEGSPRRIQVYESKQSIRCITRTPVHVYELEEELRSCAFSCPQVTPPDLK---- 918
Query: 600 NRWQEKSASDYLKGSERKL-----FGAPLVTYLEEEHLSGA-----DIDIAVSKLLSPLR 649
W+ + D + L F +P+ +E + GA +++ LL L+
Sbjct: 919 -EWKNSTKCDSIPKMVVSLTHQIPFASPVDGRNSDEDVFGAKQRRVEMEFLNVPLLVTLK 977
Query: 650 RTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK 709
R S + H + +V+ L +S + + EL +QL D ++
Sbjct: 978 RRDSMEQIHQK-----IWKVVARLLSSSLFGFQPHQ-------ELPYQLHFIDSEGTTIS 1025
Query: 710 PIQKDSI----LKPGKHIKVLLDWT-DDVHELYDPSYIKDLPVVHKTGFTVK-----KTR 759
P +++ L+P +LL+W+ YD S + + +H++ T+ +
Sbjct: 1026 PFHAETMPLSSLQPP--FSLLLEWSRHGFRRGYDRSSARRVS-LHESFRTLSLHEQPEMP 1082
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
Q ++SL C++ F E LG D WYC +C +H +A KK DL+ LP+VL+ HLKRF Y+
Sbjct: 1083 QASVSLMQCVEKFTEREQLGHTDTWYCSKCCQHVRAFKKFDLYSLPNVLIVHLKRFRYAT 1142
Query: 819 -----RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+ ++K+ T V+FP+ +LDL + + Y Y+LFA+S H GGLGGGHYTA A
Sbjct: 1143 SSLHLSHQRDKITTMVSFPVSDLDLKDCVIDPSQKGYRYELFAVSEHSGGLGGGHYTAVA 1202
Query: 874 K 874
K
Sbjct: 1203 K 1203
>gi|397476700|ref|XP_003809730.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pan paniscus]
Length = 973
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 302/570 (52%), Gaps = 81/570 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHI 581
++A+V++H+ ++ ++ E +SSI D + I
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDI 569
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 98/154 (63%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ + Y + V H G+ +KK + L C++ F T E L ++
Sbjct: 736 IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVMKKA---PVRLQECIELFTTVETLEKENP 792
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 793 WYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 852
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 853 QPQNESNPELYKYDLIAVSNHYGGMRDGHYTTFA 886
>gi|260820838|ref|XP_002605741.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
gi|229291076|gb|EEN61751.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
Length = 1785
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 253/831 (30%), Positives = 391/831 (47%), Gaps = 142/831 (17%)
Query: 87 ERPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
+ PG IDN+ +I ++EG L+ R L G+DY L+P+ VW L WY G P
Sbjct: 662 QNPGAIDNTPLIIPETRKVMMLTNEGGRLKRDRILIRGRDYELLPEPVWRALQNWYGGSP 721
Query: 142 ALPRKMI--SEGIVNEKRVEVFXLCLKLI------------------------------- 168
ALPR +I S G + + +E++ L ++L+
Sbjct: 722 ALPRTVIIPSHGDPSAE-LELYPLSIRLLRHQAPQTRAGAPGVQLGGFHFGPGGITGPMN 780
Query: 169 -DSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLD 227
R V S+ + + +Y+ +C I ++ R+W+ F ++ + L+ D TL+
Sbjct: 781 TTPRRYLAYVAAFSRMTTLKLMYQYLCNRLRIREDDMRLWN-FKEESNAYLLEEEDHTLE 839
Query: 228 DAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFN 287
ML +D + + ++V N D+
Sbjct: 840 --MLGIDDNQQILIEVRN--------KDM------------------------------- 858
Query: 288 QYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
S+ + + + + + G GL NLGNTCFMNS LQC+ +T L +Y
Sbjct: 859 -----SWPEEMSSLANQKNRMEKKQAAAEKGATGLSNLGNTCFMNSGLQCISNTHALTEY 913
Query: 348 FL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGY 406
F+ G + E+NT NPLGM G +A +GDL++ LWS +AP + +A++AP+F+G+
Sbjct: 914 FISGRHLYELNTINPLGMKGHIARRYGDLVQDLWSGTSKTIAPLKMRWTIAKYAPRFNGF 973
Query: 407 NQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVD 466
QHDSQELLAFLLDGLHEDLNRV +KPY+E+KDS GR DEEVA E W NH RN S++VD
Sbjct: 974 QQHDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRADEEVAKEAWDNHLMRNRSIVVD 1033
Query: 467 VFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
+F GQ KS + C C+ V++ FDPF +++LPLP + VTV +GS +P L
Sbjct: 1034 LFHGQLKSQVRCLHCTHVNVRFDPFNFMSLPLPMDNAMYVEVTVMKLDGS---VPVRYGL 1090
Query: 527 MKHGCCKDLILA--LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
+ K+L+L L C + + + LLL E + I F + + S + + + AY
Sbjct: 1091 RLNADEKNLVLKKHLGELCDIDVSQ-LLLLETFGATIKSFPSDGQRVRSVLGGN--LFAY 1147
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASD-------------------YLKGSER---KLFGAP 622
Q ++ E + E S + Y S++ LFG P
Sbjct: 1148 EIPAVQDSSMEEENEGKVAETSETSKPQCNGTVMTGEEPIRMDVYFLSSQKSRPSLFGTP 1207
Query: 623 L-----VTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSH 677
L V+ L+++ I VS+L+SPL + GG+ N + D L +
Sbjct: 1208 LILPCGVSSLQQDLYQA--IWTQVSRLVSPL------PPSEGGRSN-HAQDCDDSLGYEY 1258
Query: 678 NESVETAELEDL-CSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDW-TDDVHE 735
++ + + + C+ ++ C + G V +DW +H
Sbjct: 1259 PFVLKAVQRDGITCAWCPWYRF------CRGCVIDCTEEEFAMGSSY-VAIDWDPTALHL 1311
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
Y S K H++ ++ + E I L +CL AF EE LG ++ WYC +C+EH+ A
Sbjct: 1312 RYQESQEKVFE-EHESVAASRRAQSEPIDLDTCLKAFTKEEELGEEERWYCSKCQEHQLA 1370
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
KKLD+W LP +L+ H+KRF + K V FP+ N D S ++ +D
Sbjct: 1371 AKKLDIWRLPPILIVHMKRFQFLNGRWCKSHKIVKFPMKNFDPSPFLVPRD 1421
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 837 DLSKYMKSKDGESYV-YDLFAISNHYGGLGGGHYTAYAK 874
DL ++++ +++ YDLFAIS H G LGGGHY +YAK
Sbjct: 1676 DLQRWLEGALDTAHIRYDLFAISCHTGILGGGHYVSYAK 1714
>gi|354500406|ref|XP_003512291.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus
griseus]
Length = 1060
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 318/626 (50%), Gaps = 92/626 (14%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + Q Q ++N + L+ G +FL+ WY+ WE YV G + +
Sbjct: 28 PDLDEQWRQ-VENGRERPLRAGESWFLVEQHWYKQWEVYVKGGDQDANTF---------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+NS + ++ + +R L EG DYVL+P W L WY
Sbjct: 77 -------PGCINNSGLFEDQI------NWHLREGLLEGDDYVLLPMTSWNYLVSWYGLED 123
Query: 139 GGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLR 197
P + RK+I + ++VE++ + L L+ D + I+ S S + + +
Sbjct: 124 DQPPIERKVIE--VSGIRKVELYPIELLLVQHSDMETALTIQFSHSDSLDLVLQTAREQF 181
Query: 198 GIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 182 LVEPQEDTRLW-VKNSEGSLDRLCNTQITLLDASLETGQLVIMETRNKDG---------- 230
Query: 257 ALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEK 316
+ S + G N P + D+ + +
Sbjct: 231 -------TWPSAQLCG-------------MNNMP---------EEDEDFQG--------Q 253
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL
Sbjct: 254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 313
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK K Y+
Sbjct: 314 VKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYV 373
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E+ D GRPD VA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL+
Sbjct: 374 ELCDGAGRPDLVVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLS 433
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
+PLP + R + V + P V + K G DL +ALST + D+ +++A+
Sbjct: 434 VPLPVSSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVAD 492
Query: 556 VYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASD 609
V++H+ ++ + E+P +SSI D + I Y R + +G + + + +E++ S
Sbjct: 493 VFSHRFYKLYQLEDP---LSSILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTQSR 549
Query: 610 YLKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 550 DFNNSYYGLILFGHPLLVSVPRDRFS 575
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H G+ +KK+ + L C+ F T E L ++
Sbjct: 715 IAMDWEPEMKRRYYDEVEAEGYVKHDCVGYMLKKS---PVQLQECIKLFTTVETLEKENP 771
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S++ + KLDT V FPI +LD S+++
Sbjct: 772 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFVI 831
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 832 KPKNESTPDMYKYDLIAVSNHYGGMRDGHYTTFA 865
>gi|384500578|gb|EIE91069.1| hypothetical protein RO3G_15780 [Rhizopus delemar RA 99-880]
Length = 779
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 258/864 (29%), Positives = 399/864 (46%), Gaps = 173/864 (20%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
+E+Q + K+ ++ KE + ++L+S WYRS+++Y G
Sbjct: 34 KEKQF-EHFKHLKNVATKENDKWYLLSLAWYRSFKQYCEG-------------------- 72
Query: 84 KRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPAL 143
+R PIDNS ++ + S ++RR+L +DY+ +P+Q WE L WY G
Sbjct: 73 -TTDRLSPIDNSPLLDDDEES------KLRRDLIYEKDYIFLPEQAWECLVNWY--GIKE 123
Query: 144 PRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEK 203
R +IS+ + E++ L K SR L +++ Y+ + I
Sbjct: 124 DRFIISQK---ARYFEIYQLHEKSSKSRS-----FYLHHQSTIHDFYKALVIALKITTPV 175
Query: 204 ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEP 263
+W ++Q I EV V +S N L++ I+P
Sbjct: 176 VHVW------------------------LLNQRIRNEVFV-----TESLLNSLSMKEIDP 206
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
L ++ LS+ P S F+ + + GL GL+
Sbjct: 207 ----LALSAESYLSD---------HLPTSKENKYFLAIKTSSKPVIYPR-----GLHGLK 248
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS 382
NLGNTC+MNSA+QCL +TP L Q+FL D Y +IN NPLG+ GELA A+ +L++ +WS+
Sbjct: 249 NLGNTCYMNSAIQCLSNTPLLTQWFLKDIYKKDINRSNPLGLQGELAGAYAELVKSIWST 308
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
++P AFK +F FSGY Q DSQE L FLLDGLHED+NR+ KPY+E+ D
Sbjct: 309 NNMTISPFAFKKIFEKFNSHFSGYEQQDSQEFLGFLLDGLHEDMNRISDKPYVEIPDFED 368
Query: 443 RPDE-EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
E E+A+ W++HKARNDS+IVD+FQGQ+K+
Sbjct: 369 ESKENEIASHFWEHHKARNDSIIVDLFQGQFKNQ-------------------------- 402
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
FT+ L K DL + + LK + +L+ ++Y +I
Sbjct: 403 ------------------AKFTIYLRKGSTIHDLKQEIRSK--LKDIQHILITQIYQAKI 442
Query: 562 FRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKL--F 619
+ F++ E +S+I + I Y K + + L ++ L F
Sbjct: 443 CKIFKDNDEPLSNISPIDIIYVYEIPCSPSNSEKWTLFPIYYS-----LLDQTDNHLCTF 497
Query: 620 GAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNE 679
G PLV L+ +D D + K + + Y+S + + F P + + N
Sbjct: 498 GYPLVL-----ALNKSDSDPDIHKFIVNHIQRYTSKELDKEQGPLFKPRLFSSKNTYDNT 552
Query: 680 SVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWT-DDVHELYD 738
D+ + FQ Q S ++ G+ ++L W D +++
Sbjct: 553 FPLIRSFADISPQ---FQ--------------QDPSTIQSGQ--GMILQWAMDRAFDIFG 593
Query: 739 --PSYIKDLPVVHK---TGFTV---KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
P V+ F+V +++QE ++L CL F+ EE L DD+WYCP+CK
Sbjct: 594 SIPKKNSSQRAVNTDLWRKFSVLPATRSKQETLTLEDCLKEFIKEEQLSKDDLWYCPRCK 653
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY 850
++ATKK D+W LP+++V HLKRFS R NK++ +V+FPI LD++ Y+ S
Sbjct: 654 VQQRATKKFDIWRLPEIMVIHLKRFSQVRIWGNKVNIYVDFPISELDMTDYVLGSTDLSL 713
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+A+ NHYGGLGGGHYTA A+
Sbjct: 714 IYDLYAVDNHYGGLGGGHYTACAQ 737
>gi|350596285|ref|XP_001925564.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Sus scrofa]
Length = 495
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/437 (40%), Positives = 253/437 (57%), Gaps = 37/437 (8%)
Query: 191 EKVCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM 249
+++ K+ I EK R+W+ + + PL+ D T+ DA L Q +++E + ++G
Sbjct: 4 KEIRKIFNIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG--- 59
Query: 250 DSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYN 309
T GP+ N + Y Y YD
Sbjct: 60 -------------------TWPRGPSTPNVKNSNYCLPSYTAYK----------NYDYSE 90
Query: 310 TAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
+ E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPLGM GE+
Sbjct: 91 PGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEI 150
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR
Sbjct: 151 AKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNR 210
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TF
Sbjct: 211 IRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTF 270
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF YLTLPLP RT+ V + + PM + V + K G DL ALST + D
Sbjct: 271 DPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTALSTLSGVPAD 330
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
+ +++ ++YNH+ R F L S + +DD ++ +R + + + V ++
Sbjct: 331 K-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVIIPVCLREKFRH 389
Query: 608 SDYLKGSERKLFGAPLV 624
S Y + LFG P +
Sbjct: 390 SSYTHHTGSSLFGQPFL 406
>gi|410898980|ref|XP_003962975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like [Takifugu
rubripes]
Length = 963
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 202/607 (33%), Positives = 310/607 (51%), Gaps = 88/607 (14%)
Query: 39 DLKEGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDI 97
+L+ G+ ++++ RWY W+ +V GD+ ++ SF PG IDN+++
Sbjct: 30 ELRAGDTWYMVERRWYEQWKEFVETGDQ---NSSSF---------------PGQIDNTEL 71
Query: 98 IQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVN 154
+ D ++ L E +D++LVP + W KL WY G P L RK++ + +
Sbjct: 72 FDDL------DSFHIKDRLVENEDFMLVPAEAWHKLLSWYGMVDGQPPLERKVVD--LPS 123
Query: 155 EKRVEVFXLCLKL-IDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIE-QEKARIWDYFNK 212
+VE++ + L L + S + ++ S+ + + +C + + R+W +
Sbjct: 124 TVKVEIYPIELFLCLHSNMENVVTLQFSRTDNIYTIQRAMCAAFAVPVGSECRLW-MKSS 182
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAG 272
S L ++ DA L +++E + +G
Sbjct: 183 DSSCERLRNMHMSVLDACLSTGMTVVMETRNADGT------------------------- 217
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
+P SS + + +DSY +G+ G + GL NLGNTCFMN
Sbjct: 218 ----------------WP-SSRPQIMRNSVEEHDSY----RGQPG-VCGLTNLGNTCFMN 255
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SALQCL +TP L +YFL Y DE+N NPLGM GE+A A+ D+++++WS +V PR
Sbjct: 256 SALQCLSNTPPLTEYFLRNSYLDELNFTNPLGMKGEIAEAYADVIKQMWSGRHYSVVPRI 315
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK K YIE++D+ GR D+EVA E
Sbjct: 316 FKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDADGRADQEVAKE 375
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W+NH+ RNDS+IVD F G +KSTL+CP C K+S+TFDPF YL++PLP + R M V
Sbjct: 376 AWRNHRRRNDSVIVDTFHGLFKSTLICPECQKISVTFDPFCYLSVPLPVSKERIMEVFFV 435
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ P V + K G DL AL+ + + +++A+V+NH+ ++ + + E
Sbjct: 436 SLDPHAKPAQHRVVVPKAGKVSDLCAALAEMTDVPPSQ-MVVADVFNHRFYKIYTS-DES 493
Query: 572 ISSIKDDEHIVAYRF-----DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTY 626
+S I D + I Y +++ + L + R + LFG PL+
Sbjct: 494 LSCILDRDDIFVYELSMSGEQQEEQVLLALYLRERSHYRDYGSGSSSYSTTLFGHPLLLS 553
Query: 627 LEEEHLS 633
+ S
Sbjct: 554 VPRSRFS 560
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+Q + L C++ F T E L ++ WYCP CK+H+ ATKKLDLW LP+VL+ HLKRFSY+
Sbjct: 785 QQTTVQLQECIELFTTVETLEEENPWYCPVCKKHQLATKKLDLWSLPEVLIIHLKRFSYT 844
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGH 868
+ + KL++ V FP+ +LD S ++ K S YDL A+SNHYGGL GH
Sbjct: 845 KLTREKLESVVEFPLRDLDFSGFLLRKTVSSEEPPSCYDLIAVSNHYGGLRDGH 898
>gi|410056407|ref|XP_003954471.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11, partial [Pan troglodytes]
Length = 787
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 301/570 (52%), Gaps = 81/570 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+ YVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEGYVLLPAAAWHXLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHI 581
++A+V++H+ ++ ++ E +SSI D + I
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDI 569
>gi|338729116|ref|XP_001917109.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Equus caballus]
Length = 960
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 211/624 (33%), Positives = 322/624 (51%), Gaps = 88/624 (14%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+ +R+ ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 70 ESQRRQIKSSESGRERPLRAGESWFLVEQHWYQQWELYVQGGDQ--DSSTF--------- 118
Query: 83 SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
PG I+N+ + ++ + +++ L EG+DYVL+P+ W L WY G
Sbjct: 119 ------PGCINNAKLFEDQV------NWRLKKGLVEGEDYVLLPEAAWHYLVSWYGLEHG 166
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P + RK++ +++ + VEV+ + L L+ D + L + + + +
Sbjct: 167 QPPIERKVVE--LLSIQEVEVYPVELLLVQHSDMDTPCTAQFSHTDSVDLVLRTAREQFL 224
Query: 200 --EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA 257
QE+ R+W N + S L + T+ DA L+ Q +++E + +G
Sbjct: 225 VSPQEETRLW-VKNAEGSFERLCNTRVTVLDAALKTGQLVVMETRNKDGT---------- 273
Query: 258 LVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG 317
P+ T R ++ D+ + +
Sbjct: 274 ---------------WPSAQPHTTXAVRESE-------------DENFQG--------QP 297
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 298 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAEAYADLV 357
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 358 KQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 417
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 418 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 477
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 478 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVS-PERMMVADV 536
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 537 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRSAIGENSREDVVLPIYLR-ERTPARDY 594
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS 633
LFG PL+ + + LS
Sbjct: 595 NNSYYGLMLFGHPLLVSVPRDRLS 618
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ + Y + V H G+ +KK + L C++ F T E L ++
Sbjct: 740 IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVRLQECIELFTTVETLEKENP 796
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 797 WYCPSCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 856
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 857 KPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 890
>gi|340501597|gb|EGR28359.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 916
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 322/594 (54%), Gaps = 64/594 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQY-FLGDYSDEINTENPLGMHGELALAFGDLL 376
GL GLQN+GNTCFMNS+LQCL + +L Y L +Y +IN+ NPLG G+L A+ +L+
Sbjct: 310 GLCGLQNIGNTCFMNSSLQCLSNIQELTNYMLLNNYQLDINSTNPLGTGGQLVNAYSELI 369
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ +W+ G+ +P K L++FAPQF GY+Q DSQELL++L+DGLHEDLN++KQKP+++
Sbjct: 370 KNMWN-GQNTTSPFNLKKILSKFAPQFLGYSQQDSQELLSYLIDGLHEDLNKIKQKPFVQ 428
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S G+ DEE +N+ W+N+ RN S+IVD+ GQ+KSTL CP C K+S+TFDPFM L++
Sbjct: 429 QIESDGKNDEETSNQAWQNYLKRNKSIIVDLMVGQFKSTLNCPTCKKISVTFDPFMSLSV 488
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLM-KHGCCKDLILALSTACC----------L 545
P+P + + + ++Y + + LP + + K ++++ + +
Sbjct: 489 PVP--YIQYINLNIYYISFNKLPQQIILKVQNKIETLQNILEKIQRKITISEKQLILYSI 546
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG------GKIKLEIV 599
D+ +L + N +I++F + L+ +++ ++ + + D Q +IKL+I+
Sbjct: 547 NNDKQILHFQSLNEKIYKF--SSQNLLFLVQEKKNAI-FDSDLDQNIQEEFIQEIKLQII 603
Query: 600 NRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHG 659
++++ + + ER Y+ + S D+ V ++ R Y ++
Sbjct: 604 DQFRTNNQQQNMITFER-------FFYINKNSSSYKDLHYKVWRIF----RLYMHSQLES 652
Query: 660 GKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDE---RISSCKPIQKDSI 716
+ + L H E +E+ + +QL + +I+ + +D I
Sbjct: 653 NNHINIINLEKNTLQQLHEEFQHFFSIEN--EQNHPYQLFFDQKNPIQITEDLKLIQDPI 710
Query: 717 LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK-----TRQEAISLFSCLDA 771
K K + L +++L F +K ++Q+ SL+ CL+
Sbjct: 711 FKGQNKSKTIY--------LIPQESLQNLLFDKYENFNSQKKEEQESQQKQTSLYDCLNL 762
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--------- 822
F+ EE L + WYC CK+H+QA+KK++++ +P +++FH KRF ++
Sbjct: 763 FVKEEILQQGNEWYCNICKQHKQASKKMEIYKIPKIIIFHFKRFKMNKLSSIGSFYYASG 822
Query: 823 -NKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KLD F++FPI NL+L Y+ S + +YDLFA+ NH G + GGHYTA+AK
Sbjct: 823 GQKLDEFIDFPIQNLNLGNYVLSNLKKDKILYDLFAVCNHIGSVNGGHYTAFAK 876
>gi|348517076|ref|XP_003446061.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Oreochromis niloticus]
Length = 1009
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 309/605 (51%), Gaps = 98/605 (16%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNS 95
+ +L+ G ++++ RW+ W+ +V GD+ ++ SF PG IDN+
Sbjct: 28 ECELRAGESWYVVDRRWFDQWKEFVETGDQ---NSTSF---------------PGQIDNA 69
Query: 96 DIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI 152
++ ++ D ++ L E +D+VLVP + W KL WY P L RK++ +
Sbjct: 70 ELFEDL------DSYHLKDRLVEDEDFVLVPAEAWHKLLAWYGIADDQPPLERKVVD--L 121
Query: 153 VNEKRVEVFX----LCLKLIDSRDNSQTVI--RLSKKASTRQLYEKVCKLRGIEQ-EKAR 205
+ +VEV+ LCL N + VI + S+ S + +C+ + + R
Sbjct: 122 PSTLKVEVYPIEIFLCL-----HSNMENVITAKFSRTDSIHSIQRAMCQAFSVPPGSECR 176
Query: 206 IWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSR 265
+W + S L ++ DA L +++E + +G
Sbjct: 177 LW-MKSSDSSCERLRNVHMSVLDACLSSGMTVIMETRNADGT------------------ 217
Query: 266 SSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNL 325
+P SS + + DSY +G+ G + GL NL
Sbjct: 218 -----------------------WP-SSRPQIMRNSVEEQDSY----RGQPG-VCGLTNL 248
Query: 326 GNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGR 384
GNTCFMNSALQCL +TP L +YFL + Y DE+N NPLGM GE+A A+ D+++++WS
Sbjct: 249 GNTCFMNSALQCLSNTPPLTEYFLQNSYVDELNFTNPLGMKGEIAEAYADVIKQMWSGRH 308
Query: 385 AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP 444
+V PR FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK K YIE++D+ GR
Sbjct: 309 YSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDADGRQ 368
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
D+EVA E W+NH RNDS+IVD F G +KSTLVCP C KVS+TFDPF YL++PLP + R
Sbjct: 369 DQEVAEEAWRNHLRRNDSVIVDTFHGLFKSTLVCPECHKVSVTFDPFCYLSVPLPVSKER 428
Query: 505 TMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
M V + P+ V + K G DL ALS + + +++A+V+NH+ ++
Sbjct: 429 VMEVFFVSLDPYAKPVQHRVVVPKAGKVSDLCSALSEMTSVPPTQ-MVVADVFNHRFYKI 487
Query: 565 FENPAELISSIKDDEHIVAYRF-----DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLF 619
+ N E +S+I D + I Y ++ + L + R + LF
Sbjct: 488 Y-NMGESLSAILDRDDIFVYELSVLEEQPEEQVLLALYLRERSHYRDYGSGGGSYGTSLF 546
Query: 620 GAPLV 624
G PL+
Sbjct: 547 GHPLL 551
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 97/168 (57%), Gaps = 24/168 (14%)
Query: 720 GKHIKVLLDWTDDVHELY-----DPSYIKD----LPVVHKTGFTVKKTRQEAISLFSCLD 770
G V +DW D+ + + Y+KD +P H T + L C++
Sbjct: 766 GTQPYVAIDWEPDMKKRFYNENEAEKYVKDPSMEVPQQHMT-----------VQLQQCIE 814
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVN 830
F T E L ++ WYCP CK+H+ ATKKLDLW LP+VL+ HLKRFSY+++ + KLD+ V
Sbjct: 815 LFTTVETLEEENPWYCPVCKKHQLATKKLDLWSLPEVLIIHLKRFSYTKFTREKLDSIVE 874
Query: 831 FPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYAK 874
FP+ +LD S ++ K S YDL A+SNHYGGL GHYT YAK
Sbjct: 875 FPLRDLDFSGFLLRKTLSSEEPPSRYDLIAVSNHYGGLRDGHYTTYAK 922
>gi|145516118|ref|XP_001443953.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411353|emb|CAK76556.1| unnamed protein product [Paramecium tetraurelia]
Length = 992
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 263/920 (28%), Positives = 409/920 (44%), Gaps = 116/920 (12%)
Query: 46 YFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSS 105
++++ST+W W++YV DE + + ++ +R + + S+
Sbjct: 45 FYVLSTKWLNQWKQYVSYDEIVANKAP--CKYFGRITLERINDDLEDNVQKCFKYYPISN 102
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCL 165
+ ++++L+E DYV++ +++WE F Y A+ R S G +K+V V L +
Sbjct: 103 HPWNTYMKQDLQENVDYVVIDKEIWE-FFTSYYSNTAIIRS--SNGSGKDKQVAVNLLRI 159
Query: 166 KLI-----------DSRDNSQT-------VIRLSKKASTRQLYEK-VCKLRG--IEQEKA 204
K + R QT V R K + L ++ V G +
Sbjct: 160 KCVLLYPSIIKQISQDRMQRQTFDSEVLQVDRNMKFKDYQNLIQRTVHTFSGNFAKDNNV 219
Query: 205 RIWDYFNKQRSTSPLDVSD--------QTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
RIW Y Q+ +D ++ DD + ++L Q D + +L
Sbjct: 220 RIWRYVTDQKDAYKALFNDINKQVGELESQDDMCFDFNGELLTHQQYDTIEDIGIIDTNL 279
Query: 257 ALVPIEPSRSSLTIAGGPALSNGHTTG---YRFNQYPGSSFGSTFMDMDDGYDSYN---- 309
+ + I G ++ +P ++ + YN
Sbjct: 280 IVFEFKDDYKPWCIRNQAVQIEGKCENCHVFKVLSFPCICRKVSYCKEECRQKDYNYHSA 339
Query: 310 ---------------TAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YS 353
T + G+ GL NLGNTCFMNS QC+ ++ L +YFL + Y
Sbjct: 340 RCEKHGSDDESVKSLTLSQTSAKGIVGLSNLGNTCFMNSGTQCISNSYPLVEYFLKNLYF 399
Query: 354 DEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
DEIN +NPLG G+L G L++K+W R + P +K + +F P F G++QHDS E
Sbjct: 400 DEINMDNPLGTQGQLVKKVGSLIKKMWCGDRQTITPTNYKKAVGQFQPMFKGFHQHDSSE 459
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
L+ F+LDG+HEDLNRVK+KPY+E KD GR D VA E W NH ARN S+IVD+ GQYK
Sbjct: 460 LITFVLDGIHEDLNRVKKKPYVETKDYDGRSDFVVAKESWLNHLARNQSVIVDLMHGQYK 519
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN---GSGLPMPFTVTLMKHG 530
STL CP C + SITFDP++ + L +PS RT+ FY + + +PF K
Sbjct: 520 STLKCPTCQQFSITFDPYLMVQLGIPSQKKRTIQFK-FYKDLFQYQFINLPFDKN--KSI 576
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYN-HQIFRFFENPAELISSIKDDEHI-VAYRFDR 588
KD + L LK+D L + N + F F + ++ K+ + + +R
Sbjct: 577 PLKDYLKILGEE--LKVDYQQLFGYIANMYTTFEFLDENKSIVDIRKNAKRSQLCFRLIT 634
Query: 589 KQ----GGKIKLEIVNRW--QEKSASDYLKGS-------ERKLFGAPLVTYLEEEHLSGA 635
Q K ++ N++ Q+ S + G+ K + T+L++ +
Sbjct: 635 NQEFQMNKKFPIQFSNKYFEQQYKKSYFQSGAIIVDGQMTLKQVHQQIFTHLKQFFIENE 694
Query: 636 DIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESV--ETAELEDLCSRE 693
+D L + YS + +N + P N ++ V E +E++ +R
Sbjct: 695 KVDYEK----QVLNQYYSL--VYKTNQNYWNPCAFCNSKNCNDCEVKYEDETVEEVKNRA 748
Query: 694 LSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGF 753
L E I + K S K K L D D + + I+D +
Sbjct: 749 LKIDQQCNFEII----ILWKQSPFKSAK----LPDIFDHFFKS-NKIEIQDNYQKNNMSS 799
Query: 754 TVK-KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
T+ T Q +L CL E L ++ WYC CKEH QA K + ++ P +L+F L
Sbjct: 800 TINSNTSQGTATLQDCLQFSQMPEQLNAENTWYCKVCKEHVQAFKSMQIYKAPQILIFTL 859
Query: 813 KRFSYS-RYLKNKLDTFVNFPILNLDLSKYM-----------------KSKDGESYVYDL 854
KRF S R K KL+T V+FPI NLD++ ++ + + +YDL
Sbjct: 860 KRFKASNRLFKQKLETLVDFPINNLDMTDFIINSKTPLEYENENETNNGENNKQKVIYDL 919
Query: 855 FAISNHYGGLGGGHYTAYAK 874
+A+SNH+GGLGGGHYTA AK
Sbjct: 920 YAVSNHFGGLGGGHYTALAK 939
>gi|393222219|gb|EJD07703.1| UCH-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1210
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 307/598 (51%), Gaps = 58/598 (9%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
+P E+ Q ++ +KN+ + G ++++S WYR WER G+ +
Sbjct: 39 SPSEKLQFIERVKNRP---MIMGETWYIVSRAWYRRWERACRGE-------------VTK 82
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
+ + GP+DNS ++G + +++ EG D+ VP + W WY
Sbjct: 83 QGAILENQIGPVDNSKFFEDGK-------FDASQSMMEGIDFEFVPSEAWNAFVQWYGET 135
Query: 141 P-ALPRKMISEGIVNEKRVEVFXLCLKL-------IDSRDNSQTVIRLSKKASTRQLYEK 192
P + R++++ G NE +E+ LC+ + S N + +S A LY K
Sbjct: 136 PDVIARQVVTRGQNNEPCIELRPLCVPVSRLVSDTTSSSHNPPRELTISSLAKLSDLYTK 195
Query: 193 VCKLRGI-EQEKARIWDYFNKQRS----TSP-------------LDVSDQTLDDAMLQMD 234
+ + + Q + R W FN + T P D QT+++A+++
Sbjct: 196 LLDILDLPRQTQFRTWAVFNLTLNEVFVTLPNFLKGNALLLPNDEDHISQTIEEAIVEQC 255
Query: 235 QDILLEVQVDNGISMDSTG--NDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
++E+ D +D A+ P ++ + + GP + +G + G+
Sbjct: 256 DGFVVELLEDGRWLVDEVKVRQPGAVTPNPAEDTAPSFSSGPDFFSKFESGSS-KKAGGT 314
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD- 351
+ G + Y +KG G G N+GNTCFMNSALQCLVHT +L +YFL
Sbjct: 315 ALGPSPPISTSSYGKGRADRKGIVPGTIGFSNMGNTCFMNSALQCLVHTQELVEYFLTRV 374
Query: 352 YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDS 411
Y E+N +NPLGM G +A AFG ++ ++W APR FK +L RFAPQFSGY QHDS
Sbjct: 375 YQGELNPDNPLGMQGAIAEAFGVVMDRVWLPQSTVYAPREFKMQLQRFAPQFSGYQQHDS 434
Query: 412 QELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIVDVF 468
QEL+AFLLDGLHEDLNRV +KPY+E D G D+E +A E W+ +K RNDS+IVD+F
Sbjct: 435 QELVAFLLDGLHEDLNRVLKKPYVEKPDWNGGGDKELVALAKESWEGYKKRNDSVIVDLF 494
Query: 469 QGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK 528
QGQY+STLVCP C +VSITFDPFMYLTLPLP T + + S + V L +
Sbjct: 495 QGQYRSTLVCPECKRVSITFDPFMYLTLPLPVQKKWTHPILYIPWDVSKPHVKVPVELNR 554
Query: 529 HGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
+ +++ LS + D LL E ++++ +++ ++ + + D +HIV +
Sbjct: 555 NASFREVRQLLSRWMNAEPD-NLLTLETFSNRFYKYLDDTVP-VGDMSDADHIVCFEL 610
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 20/135 (14%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ I+L CLD F EE LG +D+WYC +CK+H+ ATKK DLW +PD+LV HLKRFS SR
Sbjct: 861 KKCITLNDCLDEFTREEELGEEDLWYCSKCKKHQPATKKFDLWTIPDILVVHLKRFSNSR 920
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYDLFAISN 859
L++K+D FV+FP+ LDL + ++ E +YDL+A+
Sbjct: 921 ILRDKIDAFVDFPVEGLDLEAFSGEREVAKRLAQEGHDVKALGVSDAEEPLLYDLYAVDE 980
Query: 860 HYGGLGGGHYTAYAK 874
H GGLGGGHY AYAK
Sbjct: 981 HMGGLGGGHYRAYAK 995
>gi|432953305|ref|XP_004085340.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Oryzias latipes]
Length = 786
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 6/325 (1%)
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
+ YD + ++ E+ GL GL NLGNTCFMNSA+QCL +TP L YFL D Y+DE+N +NP
Sbjct: 16 NSYDYSDQSRPSERSGLCGLSNLGNTCFMNSAVQCLSNTPPLTDYFLKDKYTDELNEDNP 75
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
LGM GE+A + +L+++LWS + V PR FK ++ RFAPQFSGY Q DS ELLAFLLDG
Sbjct: 76 LGMKGEIARVYAELIKQLWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDG 135
Query: 422 LHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCPVC
Sbjct: 136 LHEDLNRIRKKPYIQLKDANGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVC 195
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
+KVS+TFDPF YLTLPLP RT+ V + + P + +T+ K GC DL ALS
Sbjct: 196 AKVSVTFDPFCYLTLPLPMKKERTLEVYLVRLDPVAKPTQYKLTVPKVGCISDLCTALSN 255
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI--KDDEHIVAYRFDRKQGGKIKLEIV 599
+ E +++ ++YNH+ R F E +SSI +DD ++ +R + + I
Sbjct: 256 LSGVPA-EKMIVTDIYNHRFHRIFAT-NENLSSIMERDDIYVFEVAVNRVEDTD-HVVIP 312
Query: 600 NRWQEKSASDYLKGSERKLFGAPLV 624
+EK + LFG P +
Sbjct: 313 VHLREKYKQSGYNHTSTPLFGQPFL 337
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 104/149 (69%), Gaps = 3/149 (2%)
Query: 727 LDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
LDW +V + Y D + ++D K ++ L C+D F T+E LG DD WY
Sbjct: 498 LDWEPEVKKKYFDETIVEDFD--KHESMEYKPQKKAFFKLKDCIDLFTTKEKLGADDPWY 555
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK 845
CP CK+H+QATKKLDLW LP VLV HLKRFSYSRY+++KLD+ V+FP+ +LD+S+++ +
Sbjct: 556 CPNCKQHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDSLVDFPLRDLDMSEFLINP 615
Query: 846 DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ YDL A+SNHYGG+GGGHYTAYAK
Sbjct: 616 NAGPCRYDLIAVSNHYGGMGGGHYTAYAK 644
>gi|334350493|ref|XP_001371319.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Monodelphis domestica]
Length = 993
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 289/546 (52%), Gaps = 84/546 (15%)
Query: 47 FLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSS 105
FL+ WY+ WE YV GD+ D+ +F PGP++NS++ ++
Sbjct: 148 FLVEHHWYQQWEAYVRAGDQ---DSSAF---------------PGPVNNSELFEDQ---- 185
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFX 162
+ ++ L EG+DYVL+P W L WY G P + RK++ + + +VEV+
Sbjct: 186 --ETWRLKERLVEGEDYVLLPAMAWHLLVTWYGLEPGQPPIERKVVE--LPSTHKVEVYL 241
Query: 163 LCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK---LRGIEQEKARIWDYFNKQRSTSPL 219
+ L L D + +A +L + + L G E+E R+W N S L
Sbjct: 242 VELLLCQHNDMEISRPAQFSRADPVELVLQTAREQFLVGPEEE-TRLW-VKNADGSCERL 299
Query: 220 DVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNG 279
++ DA L Q +++E + +G
Sbjct: 300 RNVHMSVLDACLGPGQVVIMETRNKDGT-------------------------------- 327
Query: 280 HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLV 339
+P SS + D DS+ +G+ G + GL NLGNTCFMNSALQCL
Sbjct: 328 ---------WP-SSRPHIMKSVGDDEDSF----RGQPG-VCGLTNLGNTCFMNSALQCLS 372
Query: 340 HTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR 398
+ P L +YFL + Y E+N NPLGM GE+A A+ DL+++ WS +V PR FK K+
Sbjct: 373 NVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVKQAWSGHHRSVVPRMFKTKVGH 432
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKA 458
FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E++D+ GRPD+EVA+E W+NHK
Sbjct: 433 FASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELRDAAGRPDQEVADEAWRNHKR 492
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
RNDS+IVD F G +KSTLVCP C KVS+TFDPF YL++PLP + R M V +
Sbjct: 493 RNDSVIVDTFHGLFKSTLVCPECGKVSVTFDPFCYLSVPLPVSKERGMEVFFVSMDPRRK 552
Query: 519 PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDD 578
P + + K G DL +AL+ + D +++A+V++H+ ++ ++ L + D
Sbjct: 553 PEQHRLVVPKAGKVLDLCVALAKHTGVSPDR-MMVADVFSHRFYKIYQLEESLSCILDRD 611
Query: 579 EHIVAY 584
+ V Y
Sbjct: 612 DIFVRY 617
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D+ + Y + V H G+ ++K + L C++ F T E L ++
Sbjct: 770 IAIDWEPDMKKRYYNEVEAEGYVKHDCMGYVLRKA---PVRLQECIELFTTVETLEEENP 826
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM- 842
WYCP CK H+ ATKKLDLW LP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 827 WYCPTCKRHQLATKKLDLWALPEALIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFLI 886
Query: 843 ---KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
D YDL A+SNHYGGL GHYT +A+
Sbjct: 887 KPRSEADPAPCKYDLIAVSNHYGGLRDGHYTTFAR 921
>gi|323450041|gb|EGB05925.1| hypothetical protein AURANDRAFT_38275 [Aureococcus anophagefferens]
Length = 581
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 289/576 (50%), Gaps = 70/576 (12%)
Query: 331 MNS--ALQCLVHTPDLAQYFLGD-------YSDEINTENPLGMHGELALAFGDLLRKLWS 381
MNS LQCL HT L YFL D + DEIN +NPLG G++A A+ D +R +WS
Sbjct: 1 MNSMLQLQCLSHTHPLTNYFLEDDGNNRPTFLDEINEDNPLGAGGQIARAYADFVRDVWS 60
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
A V P A K + APQFSGY Q DSQEL+ ++LDGLHEDLNR+K+KPY E +S
Sbjct: 61 GKFAVVVPTALKRSIGTHAPQFSGYQQQDSQELMNYVLDGLHEDLNRIKRKPYTETLESN 120
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD EV+ E W + RN S+IVD GQ KS + CP C+ SITFDP++ L+LPLP+
Sbjct: 121 GRPDAEVSRESWSRFQMRNKSVIVDTCYGQLKSHITCPNCNHESITFDPYLSLSLPLPAA 180
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKH---GCCKDLILALSTACCLKIDEGLLLAEVYN 558
TR + VT+ P+ V + G KD ++AL+ + L L +V+
Sbjct: 181 KTRRVAVTLLKLPLGTRPLKLVVAVPARETVGALKDALVALAYGADARSGGDLDLCDVWG 240
Query: 559 HQIFRFFENPAELISSIKDDEHIVAYRFDRK-QGGKIKLEIVNRWQEKSASDYLKGS--- 614
H+++R F + A + IK ++ +VA+ DR+ GK K V+ K A+ GS
Sbjct: 241 HRVYRTFAD-AFSVEHIKPNDELVAFELDRRGANGKPKGRTVDVLFGKVAAARGSGSAFR 299
Query: 615 -----------ERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKEN 663
+ +LFG PL + +E G D+ +K+ + R +S +
Sbjct: 300 APGAAGAGPAKQYELFGLPLRVAVNDEATCG---DLR-AKVAAHCARFVASGDGDAYR-- 353
Query: 664 GFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHI 723
S + ES AE E L S + L +DE ++ G+
Sbjct: 354 ----CCASTASGTRFESDLGAEAEALPSTVQTVTLEWSDEDLA-------------GRVD 396
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
D DD + +I + C E LG +
Sbjct: 397 ASERDAVDD-------------HASARRRDDDGGRGAASIDVLDCFRKLAEREQLGETEQ 443
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL----KNKLDTFVNFPILNLDLS 839
WYC +CK+H +A KKLDLW +PDVL+ HLKRF Y++ + KLD V+FP+ +LDLS
Sbjct: 444 WYCAKCKQHSRAFKKLDLWSVPDVLILHLKRFQYAQNTYFVHRQKLDDLVSFPLRDLDLS 503
Query: 840 KYM--KSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+ D +YDL+A+S H GGLGGGHYTA A
Sbjct: 504 SQVLGAKDDPRGCLYDLYAVSEHSGGLGGGHYTATA 539
>gi|395546304|ref|XP_003775029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 935
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 209/607 (34%), Positives = 310/607 (51%), Gaps = 91/607 (14%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQN 100
+ + FL+ WY+ WE YV G + D+ +F PGP++N+++ ++
Sbjct: 6 RRAAVEFLVEQHWYQQWEAYVRGGDQ--DSSAF---------------PGPVNNAELFED 48
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKR 157
+ ++ L EG+DYVL+P W L WY G P + RK++ + + +
Sbjct: 49 Q------ETWRLKERLVEGEDYVLLPAMAWHLLVNWYGLEPGQPPIERKVVE--LPSTHK 100
Query: 158 VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI--EQEKARIWDYFNKQRS 215
VEV+ + L L D + +A +L + + + E+ R+W N S
Sbjct: 101 VEVYLVELLLCQHNDMEISRPAQFSRADPVELVLHTAREQFLVGPDEETRLW-VKNADGS 159
Query: 216 TSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPA 275
L ++ DA L Q +++E + +G S + + V
Sbjct: 160 CERLRNIHMSVLDACLGPGQVVIMETRNKDGTWPSSRPHIMKSV---------------- 203
Query: 276 LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSAL 335
D +DG+ +G+ G + GL NLGNTCFMNSAL
Sbjct: 204 -----------------------SDEEDGF-------RGQPG-VCGLTNLGNTCFMNSAL 232
Query: 336 QCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
QCL + P L +YFL + Y E+N NPLGM GE+A A+ DL+++ WS +V PR FK
Sbjct: 233 QCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYADLVKQAWSGHHRSVVPRMFKT 292
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWK 454
K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E++D+ GRPD+EVA+E W+
Sbjct: 293 KVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELRDAAGRPDQEVADEAWR 352
Query: 455 NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN 514
NHK RNDS+IVD F G +KSTLVCP C KVS+TFDPF YL++PLP + R M V +
Sbjct: 353 NHKRRNDSVIVDTFHGLFKSTLVCPECGKVSVTFDPFCYLSVPLPVSKERGMEVFFVSMD 412
Query: 515 GSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISS 574
P + + K G DL +AL+ + D +++A+V++H+ ++ ++ E +S
Sbjct: 413 PRRKPEQHRLVVPKAGKVLDLCVALAKHTGVSPDR-MMVADVFSHRFYKIYQL-EESLSC 470
Query: 575 IKDDEHIVAYRFDRKQGGK--------IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTY 626
I D + I Y GG + + + R + SD G LFG PL+
Sbjct: 471 ILDRDDIFVYEVSGGAGGGEGTGEDVVLPVYLRERTPARDYSDSYYG--LMLFGHPLLVS 528
Query: 627 LEEEHLS 633
+ + LS
Sbjct: 529 VPRDRLS 535
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 93/155 (60%), Gaps = 8/155 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D+ + Y + V H G+ ++K + L C++ F T E L ++
Sbjct: 712 IAIDWEPDMKKRYYNEVEAEGYVKHDCMGYVLRKA---PVRLQECIELFTTVETLEEENP 768
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM- 842
WYCP CK H+ ATKKLDL LP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 769 WYCPTCKRHQLATKKLDLGALPEALIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFII 828
Query: 843 ---KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
D YDL A+SNHYGGL GHYT +A+
Sbjct: 829 KPRTEADPTPCKYDLIAVSNHYGGLRDGHYTTFAR 863
>gi|431917785|gb|ELK17027.1| Ubiquitin carboxyl-terminal hydrolase 11 [Pteropus alecto]
Length = 881
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 214/630 (33%), Positives = 316/630 (50%), Gaps = 92/630 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
+P ++ RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 22 VPSLENQRRQI-ENGESGRERPLRAGESWFLVEQHWYKQWEVYVQGGDQ--DSSTF---- 74
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + ++ +++ L EG+DYVL+P W L WY
Sbjct: 75 -----------PGCINNAKLFEDQVNWC------LKKGLVEGEDYVLLPAAAWHYLVSWY 117
Query: 138 ---KGGPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV 193
G P + RK++ G +VEV+ + L L+ D + + L
Sbjct: 118 GLEHGQPPIERKVVELRGFC---KVEVYPVELLLVQHSDMGTPHTAEFSQTDSIDLVSCT 174
Query: 194 CKLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS 251
+ + + QE+ R+W Q S L + T+ DA L+ Q I++E + +G
Sbjct: 175 AREQFLVSPQEETRLW-VEKAQGSFERLCNTRVTVFDAALKSGQLIIMETRSKDG----- 228
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
+ A A++ F PG
Sbjct: 229 ---------------TWPSAQTHAVNRASKEDEDFQGQPG-------------------- 253
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A
Sbjct: 254 -------ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAE 306
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ DL+++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK
Sbjct: 307 AYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVK 366
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDP
Sbjct: 367 KKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDP 426
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F YL++PLP + R M V + P + + K G DL +AL+ + E
Sbjct: 427 FCYLSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGVS-PER 485
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG------GKIKLEIVNRWQE 604
+++A+V++H+ ++ ++ E +SSI D + I Y + + L I R +
Sbjct: 486 MMVADVFSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRSAICENSREDVVLPIYLR-ER 543
Query: 605 KSASDYLKGSE-RKLFGAPLVTYLEEEHLS 633
A DY LFG PL+ + + LS
Sbjct: 544 TPARDYNNSYYGLMLFGHPLLVSVPRDRLS 573
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 781 DDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSK 840
D + YCP CK+H+ ATKKLDLW LP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+
Sbjct: 715 DCVGYCPSCKQHQLATKKLDLWKLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSE 774
Query: 841 YMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
++ ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 775 FVIKPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 811
>gi|336381122|gb|EGO22274.1| hypothetical protein SERLADRAFT_440291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1348
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 237/683 (34%), Positives = 343/683 (50%), Gaps = 115/683 (16%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERP-G 90
+K Q + G ++LI+ WY+ W C E ID K E+ G
Sbjct: 117 IKQQRGRSMVIGETWYLIARPWYKRWS-IAC--EGIIDK-----------DGKVEEKDLG 162
Query: 91 PIDNSDII-QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP--ALPRKM 147
P+DN+ ++ ++GN V +L EG D VPQ W+ L WY G P +LPR +
Sbjct: 163 PVDNTPLLDKDGN---------VVSSLLEGVDVEFVPQHAWDALVTWY-GEPSHSLPRTV 212
Query: 148 ISEGIVNEKRVEVFXLCLKLIDSRDN--------SQTVIRLSKKASTRQLYEKVCKLRGI 199
I+ GI++E +E+ LK + +D + +S S ++L + K I
Sbjct: 213 IARGILHEPVLELRPPRLKALLLQDTPSEKPIGPPHPYVTMSTTGSVKELSTALVKAVSI 272
Query: 200 EQEKA-RIW-----DYFNKQRSTSP--------LDVSDQTLDDAMLQMDQDILLEVQVDN 245
A RIW D+ Q + LD +DQ+L+DA ++ D ++E Q +
Sbjct: 273 RTNAAYRIWKVEPGDFDGLQYPAAKLAQDGAVLLDDNDQSLEDACIEPDDPFVIEFQENG 332
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGG---PALSNGHTTGYRF-NQYPG---------- 291
+D++ +P + SSL G P S+ R N+ P
Sbjct: 333 NWIVDAS-----RIPKSNASSSLASPNGVPPPLFSSDDDFFSRLGNKLPSAQASQSTPSP 387
Query: 292 ---------------SSFGSTFMDMDDGYDSYNTAKKG-EKGGLAGLQNLGNTCFMNSAL 335
S F S + + S ++KK + G GL N+GNTCFMNSAL
Sbjct: 388 GASSSVNGTSIKPAKSQFNSAKSALSAPFQSLKSSKKAVQDPGTLGLGNMGNTCFMNSAL 447
Query: 336 QCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWS--SGRAAVAPRAF 392
QCL H +L YF+ G Y DE+N +NPLGMHG +A AFG LL+++W+ S + +PR F
Sbjct: 448 QCLAHLEELTDYFISGVYQDELNPDNPLGMHGAIAEAFGSLLQRIWATNSPSTSYSPREF 507
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VA 449
K +L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E D G D E +A
Sbjct: 508 KQQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDLELAQLA 567
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
+ W+ + RNDS+IVD+FQGQY+STLVCP C KVSITFDPFMYLTLPLP V + T
Sbjct: 568 QKSWEGYMQRNDSVIVDLFQGQYQSTLVCPECQKVSITFDPFMYLTLPLP--VQKKWRHT 625
Query: 510 VFYA--NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
VFY + S + V + + K+L + L K E LL E+++++ +R
Sbjct: 626 VFYVPWDISKPHVRVPVEIGRDASFKELRILLGRWMGTK-PENLLTLEIFSNRFYRIL-- 682
Query: 568 PAELISSIK--DDEHIVAY--RFDRKQGGKIKLE----------IVNRWQEKSASDYLKG 613
S++K +++ IV + R + +QG K + + + + A +Y +G
Sbjct: 683 -MTAFSAVKCQNNDVIVCFELRCNSRQGRSYKAQNDDPFIFPVILTDVPPIRPAYNYNRG 741
Query: 614 SERKLFGAPLVTYLEEEHLSGAD 636
+FG P + +++E D
Sbjct: 742 P--TMFGYPFIVVIDQEQAKSLD 762
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 85/133 (63%), Gaps = 20/133 (15%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ ISL CL F EE LG DD+WYCPQCK+H+QATKK DLW PD+LV HLKRFS SR
Sbjct: 961 KGISLNDCLAEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWKAPDILVVHLKRFSNSRA 1020
Query: 821 LKNKLDTFVNFPILNLDL-----SKYMKSKDGESYV---------------YDLFAISNH 860
L++K+DTFV+FPI L L + + +K ES V YDLFA+ H
Sbjct: 1021 LRDKIDTFVDFPIQGLHLEHMIGERKIATKLAESGVDTRELGLDDLDEPLTYDLFAVDEH 1080
Query: 861 YGGLGGGHYTAYA 873
GGLGGGHY AYA
Sbjct: 1081 LGGLGGGHYRAYA 1093
>gi|47211964|emb|CAF96183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 235/381 (61%), Gaps = 27/381 (7%)
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
+S+DS N + + PS+S L N + ++ Y S YD
Sbjct: 168 VSLDSWDNRTTITTLHPSQS---------LKNSSYSLPSYHPYSNS------------YD 206
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
+ +++ E+ GL GL NLGNTCFMNSA+QCL + P L +YFL D Y+DE+N +NPLGM
Sbjct: 207 YSDQSRQSERSGLCGLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMK 266
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE+A A+ +L++++WS + V PR FK ++ RFAPQFSGY Q DS ELLAFLLDGLHED
Sbjct: 267 GEIARAYAELIKQIWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHED 326
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCPVC KVS
Sbjct: 327 LNRIRKKPYIQLKDANGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCFKVS 386
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
+TFDPF YLTLPLP RT+ V + + P + +T+ K G DL +LS +
Sbjct: 387 VTFDPFCYLTLPLPMKKERTLEVYLVRLDPLAKPTQYKLTVPKVGYISDLCYSLSNLSGV 446
Query: 546 KIDEGLLLAEVYNHQIFRFFENPAELISSI--KDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
D+ +++ ++YNH+ R F E +SSI +DD ++ +R + + V+ +
Sbjct: 447 PADK-MIVTDIYNHRFHRIFAT-NENLSSIMERDDIYVFELAVNRVEDTDHVVVPVHLRE 504
Query: 604 EKSASDYLKGSERKLFGAPLV 624
+ S Y + LFG P +
Sbjct: 505 KYKQSGY-NHTSTTLFGLPFL 524
>gi|403413657|emb|CCM00357.1| predicted protein [Fibroporia radiculosa]
Length = 1285
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 237/712 (33%), Positives = 354/712 (49%), Gaps = 94/712 (13%)
Query: 5 DSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD 64
D M E GS T + + ++ S ++ ++++S WY+ W + + G+
Sbjct: 44 DIDAYMAEQEGSDGEATLSSPTKRLATVEELSKAPMRVNETWYVVSPSWYKRWRKALSGE 103
Query: 65 EPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVL 124
+ + P K A+ GP+DNSDI+ S D ++ +N+ D V
Sbjct: 104 ------VDKEGP------VKEADI-GPVDNSDIV------SSTDANDINQNVAP-DDLVY 143
Query: 125 VPQQVWEKLFCWYKGGP--ALPRKMISEGIVNEKRVEVFXLCLKL----IDSRDNSQTVI 178
VPQQVWE WY G P +LPRK+++ G+ E +E+ L +++ D+ +T
Sbjct: 144 VPQQVWEWFTRWY-GQPHQSLPRKVVARGVQAELSLELHPLKIRMHILSADTASQPETPP 202
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKA-----RIWDYFN---------------KQRSTSP 218
R + +S + + V L + A R W + K+R +
Sbjct: 203 RYATVSSVASVTDLVTTLATSMSDLAATSSWRAWKLADDSRPLDSLYCTSTQLKERGATL 262
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSS---LTIAGGPA 275
+D S ++++DA++Q + E + +D+ N ++ P+ S S+ +T P
Sbjct: 263 VDPSTRSVEDALIQSGDSFVYEEESLTSWVVDA--NTVSAQPVAASASTSEPITTNSTPP 320
Query: 276 LSNGHTTGYRFNQY--------------PGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAG 321
G + G F+Q P + S + S A E G L G
Sbjct: 321 KVFG-SDGDFFSQMQAKLTSPAKTSLAAPSALKPSVTIKPTSATSSRYKASSLEPGTL-G 378
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW 380
L N+GNTCFMNSALQCL HT +L YFL G + +E+N +NPLGM G +A AFG LL+++W
Sbjct: 379 LGNMGNTCFMNSALQCLAHTKELMDYFLTGVFEEELNPDNPLGMQGAIAQAFGALLQRIW 438
Query: 381 SSGRAAV--APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
++G ++ +PR FK L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E
Sbjct: 439 ATGSSSTSYSPREFKQALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKP 498
Query: 439 DSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
D G D+E +ANE W+ + RNDS+IVD+FQGQY+STLVCP C KVSITFDPFMYLT
Sbjct: 499 DWEGGGDKELVGLANESWQGYMRRNDSVIVDLFQGQYQSTLVCPECEKVSITFDPFMYLT 558
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMP---FTVTLMKHGCCKDLILALSTACCLKIDEGLL 552
LPLP + + ++Y S L P V + + KDL L D LL
Sbjct: 559 LPLP--IQKKWKHAIYYVPWS-LAKPHVKIPVEINRDASFKDLRQLLGRWMDADPD-CLL 614
Query: 553 LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF--------DRKQGGKIKLEIVNRWQE 604
E ++ + ++ ++ L+ + D++ IV + KQ + I +
Sbjct: 615 TMETFSSRFYKDLDDTC-LVGEMNDNDIIVCFELPCHAQQSRTYKQSPDDPVIIAVNLCD 673
Query: 605 KSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
A + + LFG P V L++E AD D ++ L+R +A+
Sbjct: 674 IPARQAYRS--QNLFGYPFVIVLDQEQ--AADPDAVYEAIIDRLQRWTDNAR 721
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 86/135 (63%), Gaps = 20/135 (14%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+ + ISL CLD F EE LG DD+WYCP+CK+H+QA K+ DLW +PDVLV HLKRFS S
Sbjct: 906 KNKGISLQDCLDEFTREEQLGADDLWYCPRCKKHQQAMKRFDLWKVPDVLVVHLKRFSNS 965
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYDLFAIS 858
R L++K+DTFV+FPI LD+S + + E +YDL+A+
Sbjct: 966 RTLRDKIDTFVDFPINGLDISPMVGERQVAQRLVEQGVDIAQLGLSDIDEPLIYDLYAVD 1025
Query: 859 NHYGGLGGGHYTAYA 873
H GGLGGGHY AYA
Sbjct: 1026 EHLGGLGGGHYRAYA 1040
>gi|393240437|gb|EJD47963.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1229
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 314/653 (48%), Gaps = 85/653 (13%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
E Q + +LK L G ++L+ST W W G ++ + +P V
Sbjct: 69 ERYQRIDELKKAP---LGAGETWYLVSTDWLSRWHDACLG---MVNKATGATPSEADV-- 120
Query: 84 KRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP-- 141
GP+DNS + Q ++ ++ E DY L+P+ W+ WY GP
Sbjct: 121 ------GPVDNSSLFQESG--------RLKVDIVETADYELLPEAAWKLFEEWY--GPCA 164
Query: 142 -ALPRKMISEGIVNEKRVEVF---XLCLKLIDSR----DNSQTVIRLSKKASTRQLYEKV 193
LPR ++ G V+ RVEV + +++ ++ V + A+ K
Sbjct: 165 RPLPRNVVPRGAVSGFRVEVHPPRVVLYRIVPGNGKELSGAEAVYLETSHAAKVSDMLKA 224
Query: 194 CKLR----GIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL---LEVQVDNG 246
C R G+E R W S LD + + L+ D L L+V D
Sbjct: 225 CAERLDIQGVEPADLRAWRLNCDSHHASGLDTTARDYPAGRLEDDGANLWPGLDVPADAV 284
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD------ 300
+ + + A++ IE + I + SN TT FG+ F D
Sbjct: 285 VDVAGLDDGDAII-IEAKKDGAWIVNKDS-SNASTT---------PVFGNNFFDSKFSSS 333
Query: 301 ----------MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL- 349
+ S K K G GL NLGNTCFMNSALQC+ HT ++ +YFL
Sbjct: 334 TASSTSSFPVLRPFVPSLVARKNTIKRGTMGLVNLGNTCFMNSALQCMAHTQEVTEYFLT 393
Query: 350 GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
G Y DE+N NPLGM G +A AFG LL++LW + +++APR FK L RFAPQF GY QH
Sbjct: 394 GVYRDELNPSNPLGMGGAIAEAFGSLLQRLWETTGSSIAPRDFKSALQRFAPQFIGYQQH 453
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIVD 466
D+QELLAFLLDGLHEDLNRV +KPY+E D G ++E +A W+ + RNDS+IVD
Sbjct: 454 DTQELLAFLLDGLHEDLNRVLKKPYVENPDWEGGGEQELIQLARTTWEGYMKRNDSIIVD 513
Query: 467 VFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
+FQGQYKSTLVCP CSKVSITFDPFMYLTLPLP T+ + P+ V L
Sbjct: 514 LFQGQYKSTLVCPECSKVSITFDPFMYLTLPLPVDRRWQHTIHFIPYDVQKKPLKVPVDL 573
Query: 527 MKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
+ +DL L ++ L +AE+++H+I++ +E+ A +++ + + IV Y
Sbjct: 574 SGNATMRDLKATLGRWLSVE-PPNLFVAEIWSHKIYKLYED-ASMVTEVSKGDTIVVYEL 631
Query: 587 ---------DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
D I + + +R + S Y FG P++T E
Sbjct: 632 PCRVNASKKDSHPEDHIIVPVYHRIAKPSR--YTTYQSNDYFGHPIITAFTAE 682
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 91/147 (61%), Gaps = 18/147 (12%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
P + + + ++ ++L CLD F EE LG DD+WYCP+CK+H+QATKK +LW +P
Sbjct: 867 PELEELRIAAEAKKKRLLNLDDCLDEFTREEMLGEDDLWYCPRCKKHQQATKKFELWKMP 926
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG------------------ 847
D+LV HLKRFS SR L++K+DTFV+FPI LDL + +
Sbjct: 927 DILVVHLKRFSNSRMLRDKIDTFVDFPIEGLDLEARVGERTALKSLATQGVEVPGDVDLD 986
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAK 874
E VYDL+A+ H GGLGGGHY AYAK
Sbjct: 987 EPLVYDLYAVDEHMGGLGGGHYRAYAK 1013
>gi|213409127|ref|XP_002175334.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces japonicus
yFS275]
gi|212003381|gb|EEB09041.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces japonicus
yFS275]
Length = 851
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 260/901 (28%), Positives = 416/901 (46%), Gaps = 163/901 (18%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PDE ++ L N K+ FLI W+ + + Y+
Sbjct: 29 PDEIINSIEKLNN-----WKDEKTAFLIQYDWFEALKDYL-------------------- 63
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GG 140
S+ A RPG ID ++ + N G LEE DY +V ++W L + G
Sbjct: 64 -SENATRPGSIDQRPLVSDDNTLLSG--------LEEMIDYSIVSPKLWASLVSEFGLIG 114
Query: 141 PALPRKMISEGIVNEKR--VEV----FXLCLKLIDS------------RDNS--QTVIRL 180
PAL R ++S G +++ ++V F L + L + RD + + R
Sbjct: 115 PALERNVLSIGSPSQREPFLDVYPPHFQLTILLNEDTQSASMYSAFPIRDGTLEAQMFRF 174
Query: 181 SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE 240
S+ ++ +++ E V L +E+ K R+W Y N+ P D+ L + + D +
Sbjct: 175 SEASTVQEMEETVSDLLKLERGKFRLW-YANQNYPIPPTISLDEFLKLGFMTLLSDDM-- 231
Query: 241 VQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
N +S+ D L+ +E L A G +N P + +
Sbjct: 232 ----NSMSLYELNIDRGLLVVE-----LLCADGIWPTNL--------VLPKQTTSEGLV- 273
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTE 359
G+ GL NLGNTC+MNSA+QC+ HT +L YF+ +Y ++N
Sbjct: 274 -----------------GIGGLYNLGNTCYMNSAIQCMFHTRELTGYFITNEYEKDVNYT 316
Query: 360 NPLGMHGELALAFGDLLRKL-WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPLGM+G++AL++ L++++ +A+AP +FK + F F G++Q DSQE +AF
Sbjct: 317 NPLGMNGKVALSYASLVKQMNQQKPGSAIAPSSFKRIIGEFNTSFLGFSQQDSQEFIAFF 376
Query: 419 LDGLHEDLNRVKQKPYIEMKD---SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
LDGLHEDLNRV++KPY+E D + E+VAN+CW+ +K RNDS++V +FQG YKST
Sbjct: 377 LDGLHEDLNRVRKKPYVERPDLFEDNQQKVEQVANQCWEAYKKRNDSIVVSLFQGMYKST 436
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
L C C ++SI FDPFMYLTLPLP +T + P+ T+ L D+
Sbjct: 437 LKCQQCQQISIVFDPFMYLTLPLPCEKRWKKCLTFMPDTPNQKPVALTLELDMDASISDM 496
Query: 536 ---ILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG 592
++ + + +D LL ++Y ++ R + ++ +I ++IV Y +K G
Sbjct: 497 KNEVITKLSEMSIYVD-TLLSCDIYWGKVHRIHYDHQKIRKAISKSDNIVLY--GQKCCG 553
Query: 593 KIKLEIVNRWQEKSASDYLKGS--ERKLFGAPL-----VTYLEEEHLSGADIDIAVSKLL 645
I V SA D + G+ R FG PL + ++++E + + I
Sbjct: 554 DIVYAPV---ISASARDDICGAYQYRDAFGMPLQIQLPIGWVKQETIRESIIS------- 603
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERI 705
Y + G N F L S+N +TAE E +L++ DE +
Sbjct: 604 -----AYYATTGVGVGNNDFSILAYQSL-KSNNAWEKTAETE-------VQKLTVLDEEL 650
Query: 706 SSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISL 765
+ D+ + +W + L D + + ++ + + E ++L
Sbjct: 651 -----VHVDA------GTVFVAEWDE---ALKDKCFARGKMWIYGQQ---QPSTTETVTL 693
Query: 766 FSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR-YLKNK 824
C+ F E L D WYCP CK+ R ATK +++W LP +LV HL RFS + + + K
Sbjct: 694 NDCMREFSKPEKLSAKDAWYCPNCKDFRPATKTMEIWKLPKILVIHLNRFSCRKSWRRGK 753
Query: 825 LDTFVNFPILNLDLSKYMKSK-----------DGESYVYDLFAISNHYGGLGGGHYTAYA 873
+ V FPI L LS+ +++ + + Y+L+A+ NHYG + GHYTA+A
Sbjct: 754 RNDLVTFPIEGLKLSEGSQNEWSTGTKDSFRPETCTKKYNLYAVDNHYGYMSSGHYTAFA 813
Query: 874 K 874
K
Sbjct: 814 K 814
>gi|403345866|gb|EJY72314.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1225
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 310/608 (50%), Gaps = 61/608 (10%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
+GGL GLQNLGNTCFMNS +QCL +T L +Y + G Y D IN N LG G LA F D
Sbjct: 591 RGGLVGLQNLGNTCFMNSVIQCLANTEPLVKYLVYGCYEDHINKRNTLGTRGRLASVFSD 650
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL +++ + VAP K ++R A QF G+ QHDSQE+L+FLL+ LHEDLN V KPY
Sbjct: 651 LLTEMYIGTNSYVAPWDVKNVISRRAIQFQGFAQHDSQEMLSFLLETLHEDLNDVSAKPY 710
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E KD GR D+ ++ E W+ K R SL VD+F GQ KS + C VC+K+SI+FDPF L
Sbjct: 711 VEYKDFDGRKDDIISTEYWEGFKKREKSLFVDLFYGQLKSRVQCTVCNKISISFDPFNML 770
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL------STACCLKID 548
++P+P T + +T+ F FT+ + + +++ + + C
Sbjct: 771 SVPIPQTKEQKVTIKYFPYKFEEEHKEFTLVVGEQFNLREIRQKILENQSPESQC----- 825
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK-----IKLEIVNRWQ 603
+ L L +V N +N ++++ E A+ I+L+I Q
Sbjct: 826 KELFLTKVKNKSAIYLLDNDRATRNNLEKGEEFCAFENPNNSDLSDNYFLIELKIN---Q 882
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR-----TYSSAKAH 658
K + + G + + LV ++ ++ ++ +A+ K L L + T S +
Sbjct: 883 HKRSYFVMSGIQTLTYSRLLVL---DKRMTVREVKLAIFKQLRFLIKTPDIPTISKERRK 939
Query: 659 GGKENGFLPEVID-ELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSIL 717
E L E + +N N+S L S ++ L +++ I S + + D
Sbjct: 940 NMNEQKLLEEEFNWYFNNKDNQSGSFEAGNPLYSIYVNNNLPMSEGYIYSSQA-ECDLCN 998
Query: 718 KPGKHIKVLLDWTDD--VHELYDP-SYIKDLPVVHK-----------------------T 751
K K L D+ D + ++ D Y +DL +V +
Sbjct: 999 KSHKGQNCLFDFKDQMTLRQIVDKLKYDRDLELVVQFNSNPQANLKPLENLQFKQVNLSF 1058
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
G + + ++ IS++ C+ F EE L +D WYC QCK+H+ A KK++L+ P+ L+ H
Sbjct: 1059 GASNQVMKKSGISIYDCISWFSQEETLTGNDKWYCSQCKQHQNALKKMELYRAPEFLIIH 1118
Query: 812 LKRFSYSR---YLKNKLDTFVNFPILNLDLSKY--MKSKDGESYVYDLFAISNHYGGLGG 866
LKRFS+ R + K+ ++FP+ LDL Y S + E Y+YDL+A+SNHYG L G
Sbjct: 1119 LKRFSHQRASFFSSRKIQELIDFPVEGLDLRNYCLQSSSNKEQYIYDLYAVSNHYGSLNG 1178
Query: 867 GHYTAYAK 874
GHYTA+A+
Sbjct: 1179 GHYTAFAQ 1186
>gi|440804466|gb|ELR25343.1| Ubiquitin carboxylterminal hydrolase 15, putative [Acanthamoeba
castellanii str. Neff]
Length = 1164
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 194/271 (71%), Gaps = 5/271 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G+ GLQNLGNTCFMNSALQCL +T L +FL G Y D++N NPLG GEL A+ LL
Sbjct: 366 GVCGLQNLGNTCFMNSALQCLSNTAPLTNFFLRGTYKDDVNEVNPLGTKGELVEAYTGLL 425
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R++WS + PR+FK KL RFAPQFSGY QHDSQELL FLLDG+HEDLNR+KQKPY+E
Sbjct: 426 REIWSGSARSTPPRSFKYKLERFAPQFSGYQQHDSQELLGFLLDGIHEDLNRIKQKPYVE 485
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
K++ GRPD EVA E W+ H+ARNDS+IVD FQGQ KSTL+CP CSKVSITFDPFMYL+L
Sbjct: 486 SKEADGRPDTEVAEETWQGHRARNDSVIVDRFQGQLKSTLICPECSKVSITFDPFMYLSL 545
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID-EGLLLAE 555
PLP +TR + VT + + P+ + + + KHG K+L +A+ A + +D L+LA+
Sbjct: 546 PLPMKMTRRLAVTFISRDPARRPVKYALDVPKHGSIKELRMAV--AVFVGVDARNLILAD 603
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
+YN + F+ + + E + I+D + V Y
Sbjct: 604 LYNSRFFKEYSD-RESLDVIQDRDVTVVYEL 633
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 3/152 (1%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTR-QEAISLFSCLDAFLTEEPLGPDDM 783
V L W ++ YD D+ V H + V++ +++SL+ CL+ F E LGP+D
Sbjct: 904 VALCWRNESLSFYDDEKEIDMEV-HPSARPVERDEGDQSVSLYDCLELFTQAEQLGPEDP 962
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY-SRYLKNKLDTFVNFPILNLDLSKYM 842
WYC +C E RQATKK D+W +P +LV HLKRFSY ++Y + KLDTFV+FP+ +LDLS ++
Sbjct: 963 WYCNKCAEFRQATKKFDVWKVPRILVVHLKRFSYRNKYWREKLDTFVDFPLDDLDLSPHV 1022
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
VY+L+A+SNHYG LGGGHYTAYAK
Sbjct: 1023 LGPVSTPPVYELYAVSNHYGSLGGGHYTAYAK 1054
>gi|403346439|gb|EJY72618.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1418
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 310/608 (50%), Gaps = 61/608 (10%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
+GGL GLQNLGNTCFMNS +QCL +T L +Y + G Y D IN N LG G LA F D
Sbjct: 784 RGGLVGLQNLGNTCFMNSVIQCLANTEPLVKYLVYGCYEDHINKRNTLGTRGRLASVFSD 843
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL +++ + VAP K ++R A QF G+ QHDSQE+L+FLL+ LHEDLN V KPY
Sbjct: 844 LLTEMYIGTNSYVAPWDVKNVISRRAIQFQGFAQHDSQEMLSFLLETLHEDLNDVSAKPY 903
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E KD GR D+ ++ E W+ K R SL VD+F GQ KS + C VC+K+SI+FDPF L
Sbjct: 904 VEYKDFDGRKDDIISTEYWEGFKKREKSLFVDLFYGQLKSRVQCTVCNKISISFDPFNML 963
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL------STACCLKID 548
++P+P T + +T+ F FT+ + + +++ + + C
Sbjct: 964 SVPIPQTKEQKVTIKYFPYKFEEEHKEFTLVVGEQFNLREIRQKILENQSPESQC----- 1018
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK-----IKLEIVNRWQ 603
+ L L +V N +N ++++ E A+ I+L+I Q
Sbjct: 1019 KELFLTKVKNKSAIYLLDNDRATRNNLEKGEEFCAFENPNNSDLSDNYFLIELKIN---Q 1075
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL-----SPLRRTYSSAKAH 658
K + + G + + LV ++ ++ ++ +A+ K L +P T S +
Sbjct: 1076 HKRSYFVMSGIQTLTYSRLLVL---DKRMTVREVKLAIFKQLRFLIKTPDIPTISKERRK 1132
Query: 659 GGKENGFLPEVID-ELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSIL 717
E L E + +N N+S L S ++ L +++ I S + + D
Sbjct: 1133 NMNEQKLLEEEFNWYFNNKDNQSGSFEAGNPLYSIYVNNNLPMSEGYIYSSQA-ECDLCN 1191
Query: 718 KPGKHIKVLLDWTDD--VHELYDP-SYIKDLPVVHK-----------------------T 751
K K L D+ D + ++ D Y +DL +V +
Sbjct: 1192 KSHKGQNCLFDFKDQMTLRQIVDKLKYDRDLELVVQFNSNPQANLKPLENLQFKQVNLSF 1251
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
G + + ++ IS++ C+ F EE L +D WYC QCK+H+ A KK++L+ P+ L+ H
Sbjct: 1252 GASNQVMKKSGISIYDCISWFSQEETLTGNDKWYCSQCKQHQNALKKMELYRAPEFLIIH 1311
Query: 812 LKRFSYSR---YLKNKLDTFVNFPILNLDLSKY--MKSKDGESYVYDLFAISNHYGGLGG 866
LKRFS+ R + K+ ++FP+ LDL Y S + E Y+YDL+A+SNHYG L G
Sbjct: 1312 LKRFSHQRASFFSSRKIQELIDFPVEGLDLRNYCLQSSSNKEQYIYDLYAVSNHYGSLNG 1371
Query: 867 GHYTAYAK 874
GHYTA+A+
Sbjct: 1372 GHYTAFAQ 1379
>gi|395517831|ref|XP_003763075.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 461
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 273/512 (53%), Gaps = 89/512 (17%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGVSS 83
++++V+D ++ + L+ G +FL+ WY+ WE YV GD+ D+ +F
Sbjct: 27 QQRLVEDEESGRERPLRPGESWFLVEQHWYQQWEAYVRAGDQ---DSSAF---------- 73
Query: 84 KRAERPGPIDNSDIIQNGNGSSEGDDLEVRR---NLEEGQDYVLVPQQVWEKLFCWY--- 137
PGP++N+++ +D E RR L EG+DYVL+P W L WY
Sbjct: 74 -----PGPVNNAELF---------EDQETRRLKERLVEGEDYVLLPAMAWHLLVKWYGLE 119
Query: 138 KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK-- 195
G P + RK++ + + +VEV+ + L L D + +A +L +
Sbjct: 120 PGQPPIERKVVE--LPSTHKVEVYLVELLLCQHNDMETSRPAQFSRADPIELVLHTAREQ 177
Query: 196 LRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
E+ R+W N S L ++ DA L Q I++E + +G
Sbjct: 178 FSVGPDEETRLW-VKNADGSCERLRNIHMSVLDACLGPGQVIIMETRNKDGTW------- 229
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
PS + P D D+G+ +G+
Sbjct: 230 -------PSSWPHIMKNSP-------------------------DEDEGF-------RGQ 250
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
G + GL NLGNTCFMNSALQCL + P L +YFL + Y E+N NPLGM GE+A A+ D
Sbjct: 251 PG-VCGLTNLGNTCFMNSALQCLSNVPPLTEYFLHNHYLKELNFCNPLGMKGEIAEAYAD 309
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+++ WS AV PR FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y
Sbjct: 310 LVKQAWSGHHRAVVPRMFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 369
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E++D+ GRPD+EVA+E W+NHK RNDS+IVD+F G +KSTLVCP C KVS+TFDPF YL
Sbjct: 370 VELRDAAGRPDQEVADEAWRNHKRRNDSVIVDIFHGLFKSTLVCPECGKVSVTFDPFCYL 429
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
++PLP + R M VF+ + P VTL
Sbjct: 430 SVPLPVSKERGM--EVFFVSMDPRRKPEQVTL 459
>gi|409040949|gb|EKM50435.1| hypothetical protein PHACADRAFT_129620 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1312
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 234/664 (35%), Positives = 326/664 (49%), Gaps = 92/664 (13%)
Query: 39 DLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII 98
D+ G ++++S RWYR WE+ G S+D V K GP+DN ++
Sbjct: 119 DMVVGETWYVVSRRWYRRWEKACTG---SVDK-------EGAVEEKDL---GPVDNGHLV 165
Query: 99 Q-NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP--ALPRKMISEGIVNE 155
GN ++ ++ EG D +PQ+ W+ + WY G P +PRK+I G+ E
Sbjct: 166 DFKGNIAT--------TSVTEGVDVQFLPQEAWDLIVSWY-GEPNTPIPRKVIKRGLAQE 216
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKAST------------RQLYEKVCKLRGIEQEK 203
+E+F L +S + S ++L++ VC + K
Sbjct: 217 ITLELFPPKLYAHVLTPDSAGALTPSTPVEVVVSSTDALRDVRKKLFDAVCSDSANAEFK 276
Query: 204 ARI---WDYFNKQRSTSP---LDVSDQ------TLDDAMLQMDQDILLEVQVD-NGISMD 250
W +K S S +D DQ T +D++ + +EV+ D + D
Sbjct: 277 VWALGEWQPTSKYISLSEFKRMDAPDQLVGDTHTFEDSVFEDQDAFAVEVKQDGQWLVQD 336
Query: 251 STGNDLALV------PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+ + AL P + + L +G S + P S+ S + +
Sbjct: 337 TKDSQTALSSSQQTPPADNEPTPLFQSGSDFFSQMQAKKPQ----PVSTLKSAIAAIRET 392
Query: 305 YDSYNTAKKGE-KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPL 362
D K G GL N+GNTCFMNSA+QCLVHTP+LA YFL G + E+N +NPL
Sbjct: 393 KDPRPAPKASTITPGTLGLGNMGNTCFMNSAIQCLVHTPELADYFLTGVFEKELNPDNPL 452
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVA--PRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
GMHG++A AFG LLRK+W+ +A + PR FK L++FAPQFSGY QHDSQEL+AFLLD
Sbjct: 453 GMHGQIAQAFGALLRKIWAPTSSATSYSPREFKAVLSKFAPQFSGYQQHDSQELVAFLLD 512
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYKSTLV 477
GLHEDLNR+ +KPY+E D G D+E +A E W + RNDS+IVD+FQGQY+STLV
Sbjct: 513 GLHEDLNRIIKKPYVEKPDWEGGGDKELVSLARESWDGYLKRNDSVIVDLFQGQYQSTLV 572
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA----NGSGLPMPFTVTLMKHGCCK 533
CP C KVSITFDPFMYLTLPLP V + TV Y L +P V + + K
Sbjct: 573 CPECEKVSITFDPFMYLTLPLP--VQKKWKHTVHYVPWDLEKPHLKVP--VEINRDSSFK 628
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI--SSIKDDEHIVAYRF--DRK 589
DL + E LL E++NH RF++N + I + D++ IV + + K
Sbjct: 629 DLRNLFGRWFDVN-PENLLTLEIFNH---RFYKNLDDTIICGDMTDNDVIVCFELPCNSK 684
Query: 590 QGGKIK-------LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADI--DIA 640
Q K + V S S GS FG P +T + E D D+
Sbjct: 685 QARTYKKSDEDPIIIPVVLCDTPSRSRVSYGSNHSHFGYPFLTVVTPEQAKSKDAVYDLI 744
Query: 641 VSKL 644
V +L
Sbjct: 745 VERL 748
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 91/148 (61%), Gaps = 20/148 (13%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
P + + + + ISL CLD F +E LG DD+WYCP+CK+H+QATK DLW +P
Sbjct: 921 PEIKASREAASQKKSRGISLQDCLDEFTKKEQLGEDDLWYCPRCKKHQQATKSFDLWSVP 980
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM-----------KSKD-------- 846
DVLV HLKRFS SR L++K+DTFV+FP+ LDL+ + K +D
Sbjct: 981 DVLVVHLKRFSNSRILRDKIDTFVDFPLSGLDLTSMVGQRKVASRLVEKGEDPKELGLDD 1040
Query: 847 -GESYVYDLFAISNHYGGLGGGHYTAYA 873
E VYDLFA+ H GGLGGGHY AYA
Sbjct: 1041 IDEPLVYDLFAVDEHLGGLGGGHYRAYA 1068
>gi|449547942|gb|EMD38909.1| hypothetical protein CERSUDRAFT_104201 [Ceriporiopsis subvermispora
B]
Length = 1264
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 213/595 (35%), Positives = 306/595 (51%), Gaps = 83/595 (13%)
Query: 43 GNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ-NG 101
G ++++S +WYR W++ + G+ +D GV K GP+DN+D++ +G
Sbjct: 122 GETWYIVSRKWYRKWQKALSGE---VDK-------EGGVEEKDV---GPVDNTDLVDASG 168
Query: 102 NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY-KGGPALPRKMISEGIVNEK---- 156
N S+ E D VPQ+VW WY PRK+I+ G+ NE
Sbjct: 169 NFVSQAI---------EHVDVEFVPQKVWTMFEEWYGHARQPQPRKVIARGLANEPSLEI 219
Query: 157 ---RVEVFXLCL---KLIDSRDNSQTVI-RLSKKASTRQLYEKVCKLRGIEQEKARIWDY 209
RV V+ L I R T+ + + A R E+ K ++Q K R+W
Sbjct: 220 HPPRVNVYTLTAFAPPGITVRPREVTISSQDTMIAVYRSFAEEFAKTE-VDQRKYRVWKL 278
Query: 210 FN--------------KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
+ K + L S++T+ + +++ ++E Q + +D+
Sbjct: 279 ADGASHNNIRYTPDLLKLHGATLLQPSEKTVGEELIEAGDGFVVEFQGSDQWVVDA---- 334
Query: 256 LALVPIEPS-----RSSLTIAGGPALSNGHTTGYRFN--------QYPGSSFGSTFMDMD 302
A +P S + P S+G + +S S F
Sbjct: 335 -AEIPASGSLGTSQETETAAPSQPLFSDGSDFFSSLQLQKRSTSPKQESTSLSSAFSPRR 393
Query: 303 DGYDSYNTAKKGEKG---GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINT 358
D ++AK K G GL N+GNTCFMNSALQCL HT +L YFL G + DE+N
Sbjct: 394 MWSDPDSSAKANAKTVVPGTLGLGNMGNTCFMNSALQCLAHTQELTDYFLMGVFEDELNF 453
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVA--PRAFKGKLARFAPQFSGYNQHDSQELLA 416
+NPLGMHG++A AFG LLR++W+ +A + PR FK L RFAPQFSGY QHDSQEL+A
Sbjct: 454 DNPLGMHGQIAQAFGALLRRIWAPNSSATSYSPREFKQALQRFAPQFSGYQQHDSQELVA 513
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYK 473
FLLDGLHEDLNR+ +KPYIE D G D + +ANE W+ + RNDS+IVD+FQGQY+
Sbjct: 514 FLLDGLHEDLNRILKKPYIEKPDWEGGDDRDLAKLANESWQGYLRRNDSVIVDLFQGQYQ 573
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA--NGSGLPMPFTVTLMKHGC 531
STLVCP CSKVSITFDPFMYLTLPLP V + + T+FY + S + V + +
Sbjct: 574 STLVCPECSKVSITFDPFMYLTLPLP--VQKKWSHTIFYVPWDLSKPHVKLPVEIGRDAS 631
Query: 532 CKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
+DL L D LL E++N++ ++ ++ L+ + +++ IV +
Sbjct: 632 FRDLRQLLGRWMDAHPD-NLLTLEIFNNRFYKDLDDTC-LVGEVAENDIIVCFEL 684
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 88/140 (62%), Gaps = 20/140 (14%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+ + + ISL CLD F EE LG DD+WYCP CK+H+QATK+ DLW +PDVLV HLK
Sbjct: 943 AASQNKNKGISLQDCLDEFTREERLGEDDLWYCPSCKKHQQATKRFDLWKVPDVLVVHLK 1002
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYM--------------------KSKDGESYVYD 853
RFS SR L++K+DTFV+FPI LDL++ + S E VYD
Sbjct: 1003 RFSNSRALRDKIDTFVDFPIEGLDLTEMVGERLVADRLKAQGVDTQELGMSGTDEPLVYD 1062
Query: 854 LFAISNHYGGLGGGHYTAYA 873
L+A+ H GGLGGGHY AYA
Sbjct: 1063 LYAVDEHLGGLGGGHYRAYA 1082
>gi|60360516|dbj|BAD90502.1| mKIAA4085 protein [Mus musculus]
Length = 512
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 293/560 (52%), Gaps = 76/560 (13%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
PG I+N+ + ++ +R L EG DYVL+P W + WY G P + R
Sbjct: 1 PGCINNAGLFEDQIS------WHLRERLLEGDDYVLLPAPAWNYMVSWYGLMDGQPPIER 54
Query: 146 KMIS-EGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLRGIE-QE 202
K+I GI ++VEV+ L L L+ D + I+ S S + + + +E QE
Sbjct: 55 KVIELPGI---RKVEVYPLELLLVQHSDMETALTIQFSYTDSVELVLQTAREQFLVEPQE 111
Query: 203 KARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIE 262
R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 112 DTRLWTK-NSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDG---------------- 154
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
+ S + G N P D D+ + + G+ GL
Sbjct: 155 -TWPSAQLCG-------------MNNIP---------DEDEDFQG--------QPGICGL 183
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+++ WS
Sbjct: 184 TNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLVKQTWS 243
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ +
Sbjct: 244 GYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCNGA 303
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP
Sbjct: 304 GRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVC 363
Query: 502 VTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
R + V + P V + K G DL +ALST + D+ +++A+V++H+
Sbjct: 364 SRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADVFSHRF 422
Query: 562 FRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDYLKGSE 615
++ + E+P +S I D + I Y R + +G + + + +E++ S S
Sbjct: 423 YKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRDYNNSY 479
Query: 616 RK--LFGAPLVTYLEEEHLS 633
LFG PL+ + + S
Sbjct: 480 YGLILFGHPLLVSVPRDRFS 499
>gi|148692493|gb|EDL24440.1| ubiquitin specific peptidase 15, isoform CRA_b [Mus musculus]
Length = 663
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 212/323 (65%), Gaps = 3/323 (0%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 22 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 81
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 82 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 141
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 142 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 201
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 202 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 261
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ D+ +++ ++YNH+ R F L S + +DD ++ +R + + + V
Sbjct: 262 SGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAEDTEHVVIPVCL 320
Query: 602 WQEKSASDYLKGSERKLFGAPLV 624
++ S Y + LFG P +
Sbjct: 321 REKFRHSSYTHHTGSSLFGQPFL 343
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 99/143 (69%), Gaps = 3/143 (2%)
Query: 727 LDWTDDVHELY-DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
LDW D+ + Y D + +D + K ++ + L C++ F T+E LG +D WY
Sbjct: 500 LDWDPDLKKRYFDENAAEDFEKHESVEY--KPPKRPFVKLKDCIELFTTKEKLGAEDPWY 557
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK 845
CP CKEH+QATKKLDLW LP VLV HLKRFSYSRY+++KLDT V+FPI +LD+S+++ +
Sbjct: 558 CPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINP 617
Query: 846 DGESYVYDLFAISNHYGGLGGGH 868
+ Y+L A+SNHYGG+GGGH
Sbjct: 618 NAGPCRYNLIAVSNHYGGMGGGH 640
>gi|392589983|gb|EIW79313.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1272
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 308/603 (51%), Gaps = 84/603 (13%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP 91
+K + + + G+ ++++S +WYR WE G ++ S + GP
Sbjct: 108 IKERRNRPMAVGDTWYIVSRQWYRRWEAACEG-------------RIDKDGSVEEKDVGP 154
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA--LPRKMIS 149
+DNS ++ D + +L EG D +P+ W+ L WY G P LPRK+I+
Sbjct: 155 VDNSSLVDK--------DKNLTSSLVEGIDVEFLPEDAWQSLVMWY-GQPVHPLPRKVIA 205
Query: 150 EGIVNEKRVEVF-----XLCLKLIDSRDNS---QTVIRLSKKASTRQL-YEKVCKLRGIE 200
G++ E +E+ L LK ++S D + + LS K S ++L E + +
Sbjct: 206 RGVLQEPTLELRPPRLKALILKNLESGDVAGPPPCYVTLSTKDSLKRLCRELITAVSPQV 265
Query: 201 QEKARIWDY-----------FNKQRSTSP--LDVSDQTLDDAMLQMDQDILLEVQVDNGI 247
R+W +K S +P L+ SD++L+D++++ D ++E Q +
Sbjct: 266 NAPYRVWKVDPAELSGSQIPVSKFSSYNPKLLEESDRSLEDSLIEPDDPFVVEFQENGAW 325
Query: 248 SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFG----STFMDMDD 303
+D+T + + P P S+ + R SSFG ST +
Sbjct: 326 LVDATQVTSSAADMPP----------PLFSSENDFFSRLGNRSSSSFGAGTQSTLLSSTK 375
Query: 304 GYDSYNTAKKGEKG------------GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-G 350
+ + G G GL N+GNTCFMNSALQCL H +L YFL G
Sbjct: 376 TFTPAKPSASTSTGFTRSLNKPIQMPGTLGLGNMGNTCFMNSALQCLAHNKELMDYFLFG 435
Query: 351 DYSDEINTENPLGMHGELALAFGDLLRKLWS--SGRAAVAPRAFKGKLARFAPQFSGYNQ 408
Y E+N +NPLGM G +A AFG L+ K+W+ S ++ +PR FK L RFAPQFSGY Q
Sbjct: 436 VYHQELNPDNPLGMQGAIAEAFGALVDKIWATNSTMSSYSPREFKMALQRFAPQFSGYQQ 495
Query: 409 HDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHKARNDSLIV 465
HDSQEL+AFLLDGLHEDLNRV +KPY+E D G D E +A + W +K RNDS+IV
Sbjct: 496 HDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWDGGGDVELVQLAQKSWDGYKLRNDSVIV 555
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA--NGSGLPMPFT 523
D+FQGQY+STLVCP C K+SITFDPFMYLTLPLP +T+ TV+Y +
Sbjct: 556 DLFQGQYQSTLVCPECQKISITFDPFMYLTLPLP--ITKKWRGTVYYVPWDTERPHYKVL 613
Query: 524 VTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVA 583
V + + K+L + E LL E++N++ ++ ++ L+ + D + IV
Sbjct: 614 VEVGRDSSFKELRNQVGKYMNTP-PENLLTLEIFNNRFYKSLDDNV-LVGDMSDKDIIVC 671
Query: 584 YRF 586
+
Sbjct: 672 FEL 674
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 81/131 (61%), Gaps = 20/131 (15%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+L CL F EE LG DD+WYCP+CK+H+QATKK LW PD+LV HLKRFS SR ++
Sbjct: 930 ITLGDCLAEFTKEEQLGEDDLWYCPKCKKHQQATKKFTLWNAPDILVVHLKRFSNSRAMR 989
Query: 823 NKLDTFVNFPILNLDLSKYMKSK--------------------DGESYVYDLFAISNHYG 862
+K+D V+FPI LDL+ + + D + +YDLFA+ H G
Sbjct: 990 DKIDALVDFPIEALDLTDMVGERKATRRLAESGVDVQTLGLENDDDPLLYDLFAVDEHLG 1049
Query: 863 GLGGGHYTAYA 873
GLGGGHY AYA
Sbjct: 1050 GLGGGHYRAYA 1060
>gi|389745737|gb|EIM86918.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 1356
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 297/593 (50%), Gaps = 85/593 (14%)
Query: 20 CTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMN 79
+P + +++ KN+ L G ++L+S WYR W + V G M+
Sbjct: 77 SSPQDRLTAIEEAKNRP---LLVGETWYLVSRTWYRRWHKAVSG-------------VMD 120
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
GP+DNS ++ N NG DL V + G D PQ W+ L WY G
Sbjct: 121 KEGPVVESDLGPVDNSSLV-NSNG-----DLSV--STVSGIDVEYFPQDAWDLLVTWY-G 171
Query: 140 GP--ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDN-------SQTVIRLSKKASTRQLY 190
P LPR++I G+ E VE+F ++ D+ S L ++S QL
Sbjct: 172 QPQYVLPRRVIPRGMSKEAAVELFPPRFRVYRLSDDISNFAPASTNSPELYSESSEAQLV 231
Query: 191 EKVCKLRGIEQEKA-----RIWDYFNKQRSTSPLD------------------VSDQTLD 227
E + + + + R+W K + + P D SD+TL
Sbjct: 232 EHLLPSLALTADPSTSAQYRVW----KVQLSEPEDGSEIPKRKFVELGAELVEPSDKTLS 287
Query: 228 DAMLQMDQDILLEVQ------VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL-SNGH 280
DA++ + ++E + VD + GN+ + SS+ I P NG
Sbjct: 288 DALIDSEHSFVVEFKRYGSWIVDVPPAKALHGNEAD------TSSSIYIPPPPLFGQNGF 341
Query: 281 TTGYRFNQYPGSSF----GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
++ P + S+ + G+ K G+ G GL N+GNTCFMNSALQ
Sbjct: 342 FDRMEQSRPPSLNASGVPSSSALLKPAGFTPNLRKKPGQTPGTLGLGNMGNTCFMNSALQ 401
Query: 337 CLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW--SSGRAAVAPRAFK 393
CL H +L +YFL G + DE+N +NPLGMHGE+A +FG LL ++W SS + +PR FK
Sbjct: 402 CLAHLQELTEYFLYGVFKDELNPDNPLGMHGEIAESFGALLHRIWSPSSASTSYSPREFK 461
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---AN 450
L RFAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E D G D+EV A
Sbjct: 462 SALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKEVMALAR 521
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
E W+ + RNDS+IVD+FQGQYKSTLVCP C KVSITFDPFMYLTLPLP T TV
Sbjct: 522 ESWEGYMKRNDSVIVDLFQGQYKSTLVCPECEKVSITFDPFMYLTLPLPVQKKWTHTVRY 581
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFR 563
+ + V + + KDL + + D LL E++ H+ +R
Sbjct: 582 IPWDLKKPHVRVPVEINRDASFKDLRHLIGRWMGSEPD-NLLSVELFAHKFYR 633
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 107/181 (59%), Gaps = 37/181 (20%)
Query: 716 ILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTE 775
++KPGK ++W H Y+ + + +KT ++ ISL CLD F E
Sbjct: 910 MIKPGKQ----MNWRVYTHPEYEAARQA----------SSEKT-EKGISLQDCLDEFTRE 954
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E LG +D WYCP+CK+H+QATKK DLW +PDVLV HLKRFS SR L++K++ FV+FP+
Sbjct: 955 EKLGEEDPWYCPRCKKHQQATKKFDLWRVPDVLVVHLKRFSNSRALRDKIEAFVDFPVNG 1014
Query: 836 LDLSKYMK--------SKDG--------------ESYVYDLFAISNHYGGLGGGHYTAYA 873
LDL++ + ++DG E VYDLFA+ H GGLGGGHY AYA
Sbjct: 1015 LDLTEMAEERRVGKKLAEDGSLADPSALGLEDLDEPLVYDLFAVDEHLGGLGGGHYRAYA 1074
Query: 874 K 874
+
Sbjct: 1075 Q 1075
>gi|297709837|ref|XP_002831614.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pongo abelii]
Length = 934
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 266/497 (53%), Gaps = 79/497 (15%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W + WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHDMVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTV 508
YL++PLP + R + V
Sbjct: 482 CYLSVPLPISHKRVLEV 498
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 9/155 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKT--GFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ +DW ++ + Y + V H T G+ +KK + L C++ F T E L ++
Sbjct: 712 IAIDWEPEMKKRYYDEVEAEGYVKHDTCVGYVMKKA---PVRLQECIELFTTVETLEKEN 768
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 769 PWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFV 828
Query: 843 KSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+S Y YDL A+SNHYGG+ GHYT +A
Sbjct: 829 IQPQNDSNPELYKYDLIAVSNHYGGMRDGHYTTFA 863
>gi|213409938|ref|XP_002175739.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212003786|gb|EEB09446.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 970
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 208/609 (34%), Positives = 306/609 (50%), Gaps = 110/609 (18%)
Query: 19 PCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHM 78
P D+++ + ++ +S+L++ G++ +++S WY+S ++ P
Sbjct: 52 PSIDDQKKLLGDTIEEESELEV--GDVEYVLSYSWYQSLCEHLSEGGPD----------- 98
Query: 79 NGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK 138
PGPID +DI G DLE RNL+E D+VLVP+ VW+ L WY
Sbjct: 99 ----------PGPIDQNDITDEDTG-----DLE--RNLQEESDFVLVPEHVWKILISWYG 141
Query: 139 -GGPALPRKMISEGIVNEKR--VEV----FXLCLKLIDSRDNSQ-------TVIRLSKKA 184
G + PR +I++G + VEV F L L ++ S D+ + ++ S K+
Sbjct: 142 LNGKSYPRNVINQGTEDSSHLIVEVYPPRFRLALLVLPSEDSKKFSAREDIPLVTFSSKS 201
Query: 185 STRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVS----------------DQTLDD 228
S + L + + + ++ ++ R+W ++ S +D S + +L D
Sbjct: 202 SIKNLLKAIKETFNLDTDEFRLWRLESETLSKPTIDPSSFIKLGSRELLNFTDVNISLID 261
Query: 229 AMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQ 288
A + D D+++E V +D +V R+S GG A
Sbjct: 262 AEIDSDTDLVIECTVHGNWPVDHALRVQYMV----QRASKN--GGQA------------- 302
Query: 289 YPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF 348
+ K +K GL GL NLGNTC+MNSALQCL HTP+L +F
Sbjct: 303 --------------------DAEAKSKKMGLCGLANLGNTCYMNSALQCLSHTPELVDFF 342
Query: 349 LG-DYSDEINTENPLGMHGELALAFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGY 406
D+ +++N NPLG G++A + DL++ L+SS + +PR FK + R F GY
Sbjct: 343 QNQDWKEQVNETNPLGTGGQIASVYADLIKALYSSEAKDFFSPRHFKAVVGRLNHSFIGY 402
Query: 407 NQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---ANECWKNHKARNDSL 463
Q DSQE LAFLLDGLHEDLNR++QKPY E D +++ ANECWK HK RNDS+
Sbjct: 403 QQQDSQEFLAFLLDGLHEDLNRIQQKPYTEKPDLFENDPQKIIDTANECWKLHKMRNDSV 462
Query: 464 IVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
IVD FQG YKSTLVCP C+KVSITFDPFM LTLPLP V++ T TV Y P +
Sbjct: 463 IVDTFQGMYKSTLVCPECNKVSITFDPFMDLTLPLP--VSQNWTHTVLYVPKDITRKPVS 520
Query: 524 VTLM---KHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN-PAELISSIKDDE 579
V ++ K L ++ + LL+AE Y + +R+F N + ++ I +D+
Sbjct: 521 VEVVFENKSATIDTLRNFVAEKVGCEDAAALLVAETYRGRFYRYFTNVKSSVMMDISEDD 580
Query: 580 HIVAYRFDR 588
I Y DR
Sbjct: 581 EIYIYELDR 589
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 83/123 (67%), Gaps = 5/123 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
K ++ ISL CL+ F E L +D WYCP CKE R A K+++LW PDVL+FHLKRF
Sbjct: 803 KPEEKKDISLDDCLNEFEKTEQLSEEDPWYCPNCKEFRCAYKQMELWFAPDVLIFHLKRF 862
Query: 816 SYSRYLKNKLDTFVNFPILNLDL-----SKYMKSKDGESYVYDLFAISNHYGGLGGGHYT 870
S R ++K+D +NFPI +LDL S ++K E+ VYDLFA+ NHYG LGGGHYT
Sbjct: 863 SSERRFRDKIDVLINFPIKSLDLTNRIGSNKQQNKPNETIVYDLFAVDNHYGSLGGGHYT 922
Query: 871 AYA 873
AYA
Sbjct: 923 AYA 925
>gi|330822614|ref|XP_003291744.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
gi|325078064|gb|EGC31737.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
Length = 984
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 278/521 (53%), Gaps = 94/521 (18%)
Query: 27 QIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRA 86
+I++D+K L G+L+ L++ W+ ++ +
Sbjct: 71 EILRDIKQTP---LTVGDLWSLVNMEWFSKFQEAIF----------------------TR 105
Query: 87 ERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRK 146
E G IDNS + S+ + ++ + E +D+ VP++VW KL Y GGP + RK
Sbjct: 106 EELGQIDNSPFL-----ISKDNPDHLKPGVCENKDFATVPEKVWNKLQKIYGGGPTVTRK 160
Query: 147 MISEGIVNEKRVEV-FXLCLKLIDSRDNSQTVIRLSKKASTRQLY-EKVCKLRGIEQEKA 204
+S+ ++ +++ LK++ S S+ + K+ T +++ E+ CKL +E
Sbjct: 161 -VSKSLIGNLIIDLKIPFPLKVMKSSATSEVFDCYAFKSETIKVFKERACKLLNVEPINV 219
Query: 205 RIWDYFNKQRSTSPLDVSDQT-LDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEP 263
RIWDY+N + ++ DQ + ++ L +Q ILL+ ++ NG
Sbjct: 220 RIWDYYNNNKHA---ELKDQEYVSNSNLIENQLILLDERLPNG----------------- 259
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE---KGGLA 320
++P + D Y +Y+T +G+ + G+
Sbjct: 260 ------------------------KWPQQA---------DRYQTYSTNSRGDGDKRPGIT 286
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMNSALQCL +T L +YF + Y +IN +NPLG GELA + L+ +
Sbjct: 287 GLGNLGNTCFMNSALQCLSNTYPLTKYFFTNKYEKDINKDNPLGCGGELATEYASLISDI 346
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
W R +V PR FK ++ RFAPQF+GY+QHDSQELLAFLLDGLHEDLN+VK+KP+ E KD
Sbjct: 347 WEGNRTSVYPRNFKSQIERFAPQFAGYHQHDSQELLAFLLDGLHEDLNKVKKKPFFEGKD 406
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
RPDE +ANE W H ARNDS+IVD FQ Q KS LVCP C K+SITFDPFMYL+LPLP
Sbjct: 407 YDERPDEVIANEQWGMHVARNDSVIVDWFQAQLKSKLVCPDCGKISITFDPFMYLSLPLP 466
Query: 500 STVTRTMTVTVFYANGSGLPMPFTVTLMKHGC-CKDLILAL 539
S + + T + Y N S + ++L + C KD + L
Sbjct: 467 SEINKQFTYS--YINSSLVVERRQLSLSSNNCQVKDFLHKL 505
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 704 RISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAI 763
++ C K+ I+ P K ++ L W D L Y K P + K G V+ +
Sbjct: 705 QMVDCSSYHKERIVFPFKSNEIALVWEDPSLYL---EYEKLSPDLTKNG-GVRDVSPYNV 760
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
L C+D F TEE LGP+D WYC CK+H++A KK D+W P +LV HLKRFSY ++ ++
Sbjct: 761 DLEQCIDLFTTEEQLGPEDPWYCSNCKKHQRAFKKFDIWSAPPILVVHLKRFSYKKHYRD 820
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
KLDT V FPI +LDLSKY+ SK+ +YDLFA+SNHYG LGGGHYTAYA
Sbjct: 821 KLDTLVKFPIKDLDLSKYVLSKNQPPPIYDLFAVSNHYGSLGGGHYTAYA 870
>gi|19075499|ref|NP_587999.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces pombe
972h-]
gi|24638334|sp|Q9USM5.1|UBP1_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 1;
AltName: Full=Deubiquitinating enzyme 1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|5748692|emb|CAB53084.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces pombe]
Length = 849
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 258/891 (28%), Positives = 393/891 (44%), Gaps = 188/891 (21%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
FLI W+ + ++ G+ + PGPI ++ N
Sbjct: 47 FLIDYDWFEGYVDFIYGE---------------------GDNPGPITQWRLLDEKN---- 81
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRKMISEGIVNEKR--VEVFXL 163
E++ +LEE DY +V +W L W+ G A+ RK++ G+ E++ V+++ +
Sbjct: 82 ----ELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVLLVGLAAEQKPFVDIYPI 137
Query: 164 CLKL------IDSRDNSQT---------------VIRLSKKASTRQLYEKVCKLRGIEQE 202
L I+ + S + S+ + R LY++V + I
Sbjct: 138 NFTLHVLFDPINGENTSYSPLYQIDEPYHSDEPYAFSFSRSDTLRSLYKQVMEAFQISDG 197
Query: 203 KA-RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPI 261
+ R+W Y NK +S VS +D Q +L E V I
Sbjct: 198 TSFRLW-YLNKSNLSSRF-VSLSEFND---QPAIALLSEYAVCMTIF------------- 239
Query: 262 EPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAG 321
+ IA G L Q+P + + D ++ GL G
Sbjct: 240 -----EIDIADGSLLLEF--------QHPNGEW------LSDSITKEQNLTINKEIGLCG 280
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGN+C+MNSALQC++HT +L +YFL D Y +IN NPLGM G++AL++ LL+ +
Sbjct: 281 LYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMIH 340
Query: 381 SSG-RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
+ +V+P +FK + F FSGY Q DSQE +AF LDGLHEDLNR++ KPY E
Sbjct: 341 HTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFE--- 397
Query: 440 SGGRPD---------EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
RPD + VAN+CW H RNDS+IV +FQG YKSTL C +C + S FDP
Sbjct: 398 ---RPDLFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDP 454
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL-ILALSTACCLKIDE 549
FMYLTLPLP++ V G+ P+ + L+ + A + ++
Sbjct: 455 FMYLTLPLPTSAKWRHKVVYVPPFGTQSPVELYLELLMESTVIQMKFQATEKLQKMGLEC 514
Query: 550 GLLLA-EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVN-------- 600
G L A ++Y ++++ +N ++ I +H+V Y + + IV+
Sbjct: 515 GELTACDIYRGKVYKVLKNKDKISKKIHKWDHVVLY---GSTANGLTIPIVHGCKRPAMP 571
Query: 601 -RWQEKSASDY---LKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
+Q + L R + LV + E + A ID+A+ L L+R S A
Sbjct: 572 GSYQSNDVFGFPLQLNVRSRNVLTNDLVKEIVELYRVYAGIDVAIGTLQLGLKRMESKA- 630
Query: 657 AHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI 716
GK E ++ E++ E ++ + D+ + C
Sbjct: 631 ---GKW----------------ECIKEIEVKRFEIVEEE-EIVIDDKTVIMCL------- 663
Query: 717 LKPGKHIKVLLDWTDDVHE--LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLT 774
W D +E Y+ +I F + E+I+L CL F
Sbjct: 664 ------------WNDQQYEKLFYNCEWI----------FEKIQFHMESITLEDCLLEFSK 701
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS---RYLKNKLDTFVNF 831
E L D WYCP CK R ATK+L++W LP +LV HL RFS + K V +
Sbjct: 702 PEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVY 761
Query: 832 PILNLDLSKYMKS--KDGE------SYVYDLFAISNHYGGLGGGHYTAYAK 874
P+ +L+L +++ KD E S +YDL+A+ NH+G + GHYTAYA+
Sbjct: 762 PVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGFMSNGHYTAYAR 812
>gi|443898438|dbj|GAC75773.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1407
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 211/603 (34%), Positives = 314/603 (52%), Gaps = 68/603 (11%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
T ++ +V ++N L L G+ ++++S WYR W+ C S H +
Sbjct: 221 TGQQQLNLVSPMRN---LPLHAGDTWYIVSRAWYRRWD-AAC------------SEHRDA 264
Query: 81 VSSKRAERP-GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK- 138
S++A+ P GPIDN+D++ + + ++R+++ E DY ++P+Q W+ L WY
Sbjct: 265 DPSEKADPPVGPIDNADLLDSEAPTGFA---QLRQHINEHTDYEMLPEQGWKLLVAWYGC 321
Query: 139 GGPALPRKMISEGIVNEKRVEVFXLCLKLI-----DSRDNSQTVIRLSKKASTRQLYEKV 193
GPA R I ++ VE + ++L+ D+R++ S ST +L E
Sbjct: 322 TGPAFARNAIEGLSPGQESVEFYPPIIRLLRVVQDDTRNDVNPAPLFSLSVST-ELSELK 380
Query: 194 CKLRGI----EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD----- 244
K + + A + Y + S L T+ + +++D L++ D
Sbjct: 381 AKAKATFDLGDLADADLRFYHFPEPEDSELQSGRVTI--SRIELDGVDLIDANEDRPDTY 438
Query: 245 -NGISMDSTGND---LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFG----- 295
+ I++ S G D + LV +E +S + GPA G F Q G F
Sbjct: 439 RSDITLKSIGIDEIEVNLV-VETRKSGRWQSDGPAEEAPSVKGI-FAQQSGDFFSNLQQP 496
Query: 296 ----STFMDMDDGYDSYNTAKK---------GEKGGLAGLQNLGNTCFMNSALQCLVHTP 342
++ D+ + G GL GL NLGNTCFMNSALQCL +T
Sbjct: 497 SASSTSVTAAGAAPDALGRVTRSQTATDRTMGRSRGLRGLNNLGNTCFMNSALQCLSNTY 556
Query: 343 DLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAP 401
+L QYF+ G Y DE+NT+NPLGM G +A AFG+L+ +W+ + PR FK L+RFAP
Sbjct: 557 ELQQYFVSGAYRDELNTDNPLGMGGAIAEAFGNLISNIWNGQGGSFWPREFKFALSRFAP 616
Query: 402 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---ANECWKNHKA 458
QFSGY QHDSQELLAFLLDGLHEDLNR+ +KPYIE D G ++ + A W +KA
Sbjct: 617 QFSGYAQHDSQELLAFLLDGLHEDLNRILKKPYIEAPDWDGGDEKALVAFAKRQWDIYKA 676
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
RNDS+IVD+FQGQY+STLVCP CSK+SI FDPFMYLTLP+P+ V +
Sbjct: 677 RNDSVIVDLFQGQYRSTLVCPECSKISIKFDPFMYLTLPIPNKKVWRAQVYFVPLEPTKP 736
Query: 519 PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDD 578
F V L L ++ ++ + L+ EV++H+I+++ ++ L+ IKD
Sbjct: 737 MQKFHVQLPAGSTVSKLRQKVAAQFGVETRQ-LICGEVWHHRIYKWIDDYEPLV-DIKDG 794
Query: 579 EHI 581
+ +
Sbjct: 795 DFV 797
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 37/157 (23%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+R +++S+ C+D F EE LG DD WYCP CKE RQATKK DLW PD+LV HLKRFS
Sbjct: 1115 SRPKSLSIEDCMDEFTKEEQLGEDDPWYCPSCKEFRQATKKFDLWKAPDILVVHLKRFSA 1174
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS------------KDGESY--------------- 850
R+ ++KL+ V+FP+ LDL+ ++ + GE
Sbjct: 1175 GRHSRDKLNMLVDFPLEGLDLTDRVEGTQALRRVQEEAKQSGEELSESMLGSGILRPLED 1234
Query: 851 ----------VYDLFAISNHYGGLGGGHYTAYAKVNA 877
+YDL+A+ NH+GGLGGGHYTA+AK A
Sbjct: 1235 NDDAVAVDKPIYDLYAVDNHFGGLGGGHYTAFAKSPA 1271
>gi|145513238|ref|XP_001442530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409883|emb|CAK75133.1| unnamed protein product [Paramecium tetraurelia]
Length = 1036
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 260/900 (28%), Positives = 419/900 (46%), Gaps = 143/900 (15%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSP-------HMNGVSS-----KRAERPGPIDN 94
+LI TRW+ W+ YV + N + + ++ VS+ ++ PGPI+
Sbjct: 162 YLIPTRWFNKWKSYVTDTALELPNENLNIEKEIEVLENIFNVSNDLDIEEQITAPGPING 221
Query: 95 SDIIQNGN-------GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKM 147
+IQ + G + ++ N+ EG D++LV ++ E Y GG + R +
Sbjct: 222 FQLIQAQSTLELDPFGPKSYTNYILKENIREGADFILVGHKILEYFKNIY-GGFEIKRLI 280
Query: 148 ISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST---RQLYEKVCKLRGIEQEKA 204
+ ++K V++ ++ I + + IRL S+ L +KV ++ + E
Sbjct: 281 VEHSQTHQKYVDLVPRMIQYIILPNEEKHRIRLITANSSDLILDLCKKVNRILKLNNE-V 339
Query: 205 RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPS 264
R W FN +S + + + Q+ +L + + + I+ S+ DL + I+
Sbjct: 340 RWWK-FNDSQSQQDF-IKNLQRRELYKQISAKVLEKTTMIDEINFSSS--DLFICEIKYG 395
Query: 265 RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQN 324
R +S T SSF S +++ D N ++KG + GLQN
Sbjct: 396 RDW-------QMSEIDTKSM-------SSFKSK-INISDVPKIINDSRKG----VTGLQN 436
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSG 383
LGNTCFMN+ALQCL +T +L +Y + ++ +N +NPLG G LA A+ +L++ +W
Sbjct: 437 LGNTCFMNAALQCLSNTYELTEYMVSNEFFQHLNCDNPLGTKGALATAYAELMKIMWYGN 496
Query: 384 RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR 443
+AV+ K + +FAPQF GY Q DS E L++LLDGLHEDLN+V KP+++ +
Sbjct: 497 NSAVSAYDLKRVIGKFAPQFYGYGQQDSHEFLSYLLDGLHEDLNKVLVKPFVKEVEITDE 556
Query: 444 PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVT 503
D E + W N+ RN S I + GQYKSTLVCP C +VS TFDP+M L+LP+PS
Sbjct: 557 TDFEASRIFWNNYILRNQSKIQQLMVGQYKSTLVCPNCHRVSKTFDPYMSLSLPIPSYTL 616
Query: 504 RTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFR 563
+++ Y NG +P+ + L + L + L I++
Sbjct: 617 IQLSMYFIYQNGK-IPLKIQLNLTSDQDANYIGQELQKS--LNIEQ-------------- 659
Query: 564 FFENPAELISSIKDDEHIVAYRFDRKQG--------GKIKLEIVNRWQEKSASD------ 609
E ++ I +H++ R RKQ G++ + V + + + D
Sbjct: 660 ------EQMNFILLKDHLIRERVKRKQNVKWIQEHEGQLFIYQVEKEFHQLSDDQVHVDF 713
Query: 610 -YLKGSERKLFGAPLVTYLEEEHLSGAD--IDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
Y ++R +++Y + L+ IDI + Y K H L
Sbjct: 714 FYCNKTDRSNVNEQIISYPRQFVLAKQKNIIDIYF--------KIYQQFKPH-------L 758
Query: 667 PEVIDELSNS-HNESVETAE--------LEDLCSRELSFQLSLTD--ERISSCKPIQKDS 715
VI EL++S NE V E LE+ F++ L + + + +D+
Sbjct: 759 ILVIQELADSLLNEGVNIEEYCQSVPETLEEFIEEMKQFKVELYKLVHNGKTLEYLNQDT 818
Query: 716 I---LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCL 769
I + I V L+ L+ S + +L F ++ RQ +L CL
Sbjct: 819 IENFKQKSLSIHVFLN------PLFGKSGLHNLKFQRCKDFNNEQNRQLRKGEYTLEDCL 872
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF--------SYSRYL 821
+F EE LG D WYC +CK+H QATK+++++ P +L+ HLKRF SY +
Sbjct: 873 RSFAKEEVLGKGDEWYCNRCKQHVQATKQMEIYRAPQLLIIHLKRFRSGNNRISSYGGFF 932
Query: 822 ----KNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
K+ T V+FP L+L+ ++ SK +S Y Y+L+ + NH+GGLGGGHYTA A
Sbjct: 933 YSGGSQKITTMVHFP-KKLNLNPFVLSKVNDSDPIDYNYELYGVDNHFGGLGGGHYTACA 991
>gi|412988619|emb|CCO17955.1| unnamed protein product [Bathycoccus prasinos]
Length = 1264
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 197/293 (67%), Gaps = 13/293 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G AGLQNLGNTCFMNSALQCL HT L FL + Y ++IN +NP+GM G+LA + L+
Sbjct: 508 GKAGLQNLGNTCFMNSALQCLSHTSMLTDAFLSNAYVEDINEDNPIGMGGKLAKEYAKLI 567
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LW G +VAPRAFK LA+FAPQFSGYNQ D+QELLAFLLDGLHEDLNRVK KPY+E
Sbjct: 568 TALWRDGAVSVAPRAFKSALAKFAPQFSGYNQQDAQELLAFLLDGLHEDLNRVKVKPYVE 627
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD+ GR D +VA E W+NH ARN+S IVD FQGQYKSTLVCP C S+ FDPFMYLT+
Sbjct: 628 EKDATGRTDADVAKEHWENHLARNNSRIVDAFQGQYKSTLVCPDCENRSVKFDPFMYLTV 687
Query: 497 PLPSTVTRTMTVTVFYANGSGL-PMPFTVTLMKHGCCKDLILALSTACCLKIDEGL---- 551
PLP+T R + VT+ + + GL PM V + G KDL L +I+E +
Sbjct: 688 PLPTTRERELKVTILFCDQPGLKPMKVVVVVDNEGSVKDLEKNLFETLAGEIEEDIGEIS 747
Query: 552 ------LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEI 598
++A+++ ++++FF++ A+L I D + + AY + + K + E+
Sbjct: 748 DSTHRWVIADIFKAKVYKFFDSDAKL-REISDKDVVFAYCLPKTKENKNEDEL 799
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 14/130 (10%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
VKKT L +C++ F+ EEPLG DDMWYC +CK+H A +++W P +L+ HLK
Sbjct: 1034 AVKKT-----PLSACMEHFIKEEPLGEDDMWYCGKCKKHVPAKCSMNIWRAPPILILHLK 1088
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK---------SKDGESYVYDLFAISNHYGGL 864
RFSYSR ++K+D +++P+ + D+S ++ S +S VYDL+A+ NHYG +
Sbjct: 1089 RFSYSRSWRDKIDVKIDYPLEDFDISPFIAEDALFFDEDSDLPKSTVYDLYAVVNHYGSM 1148
Query: 865 GGGHYTAYAK 874
GGGHYTAYAK
Sbjct: 1149 GGGHYTAYAK 1158
>gi|145483917|ref|XP_001427981.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395064|emb|CAK60583.1| unnamed protein product [Paramecium tetraurelia]
Length = 1032
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 248/906 (27%), Positives = 428/906 (47%), Gaps = 118/906 (13%)
Query: 33 KNQSDLDL--KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHM------------ 78
K + DLD ++G +LI W++ W YV ++P I + P M
Sbjct: 135 KEEKDLDYFSQDGLCSYLIPAAWFQKWRLYVKNEDP----IVIEDPIMGLDVTKLRQLLN 190
Query: 79 ---NGVSSKRAERPGPIDNSDIIQ-------NGNGSSEGDDLEVRRNLEEGQDYVLVPQQ 128
+ ++ + PGPID+S +IQ + S + + +R +L EG D+V V +
Sbjct: 191 LNEDSINEETEVIPGPIDSSRLIQIKWNLLPDPTQSKQYLNYVLRNDLREGVDFVHVSAK 250
Query: 129 VWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDN-SQTVIRLSKKASTR 187
V+ K F G A+ R ++ + + V++ +++I + ++ + ++ +
Sbjct: 251 VF-KFFEKIYGAFAVKRLIVKQDEQDRILVDLIPRVVEIIILENQLEESSLSVNGFEQVQ 309
Query: 188 QLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLD-VSDQTLDDAMLQMDQDILLEVQVDNG 246
+L K+ ++GI E + W + + Q + + T ++ D D L++++D+
Sbjct: 310 ELTRKIRVIKGIGNE-IKWWKFKDLQSQMDWMSMIQKGTFIKSIKGKDLD--LKIKIDD- 365
Query: 247 ISMDSTGNDLALVPIEPSRS-SLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
++ T D+ + I+ +S LT + ++ S+ D
Sbjct: 366 --LNLTTQDILICEIKQGKSWQLTAEINSLQQKEQNVSELYAKFGISNIPRCLSD----- 418
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGM 364
+ G+ GLQNLGNTCFMN+ALQCL +T + +Y + ++ +N N LG
Sbjct: 419 ---------SRRGMTGLQNLGNTCFMNAALQCLSNTYEFTEYMVYNHFAQHLNPNNVLGT 469
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
G LA ++ +L++ +W S ++V+ K + +FAPQF GY Q DS E L++LLDGLHE
Sbjct: 470 KGFLAASYAELMKSMWFSNYSSVSAIDLKKVIGKFAPQFYGYGQQDSHEFLSYLLDGLHE 529
Query: 425 DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
DLNRV KP + + D++ + + W N+ RN S I ++ GQYKSTLVCP+CS++
Sbjct: 530 DLNRVLNKPIVTDIEITNESDQQASEKFWINYTLRNQSKIQELMVGQYKSTLVCPICSRI 589
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
S TFDPFM L+LP+PS + + ++ Y + +P ++ L D++ L
Sbjct: 590 SKTFDPFMSLSLPIPSFSSFSSSLYFIYDDSETMPAKISLQLSSDMTGLDILKQLENLLS 649
Query: 545 L--KIDEGLLLAEVYNHQI------------------FRFFENPAELISSIKDDEHIVAY 584
+ K LL+ E HQI F + + I ++K ++ V +
Sbjct: 650 ISHKRMNMLLIKE---HQIQERVPYEKGAKWISEHIGILFVQEVEQNIQNMKQNQMNVDF 706
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKL 644
+ K +++ + + + D + ++L+G + Y HL+ A ++ +
Sbjct: 707 YYVSKATKIYEVDKILSFPRQVVIDR-NSTAQQLYGQ--IYYKFRIHLTLAVKELTAQEF 763
Query: 645 LSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDER 704
PL+ + S E I + ++ +L D +E+ F +D+
Sbjct: 764 --PLKDQFLSLPRPKNLEESIQEFAILIQNQLQPFTLRFKDLSDKSKKEIQF----SDDA 817
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA-- 762
IS+ G ++ + + ++ Y ++ L + FT T+ +
Sbjct: 818 ISNI----------SGSNLSIEVIISE-----YLTKTVQILKLQRCKEFTTNDTKSQVRK 862
Query: 763 --ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR- 819
L CL AF EE LG D WYC +CK+H QA+KK++++ P +L+ HLKRF +R
Sbjct: 863 GEYDLDDCLKAFTKEEILGKGDEWYCNRCKKHVQASKKMEIYKAPQILIIHLKRFKTNRI 922
Query: 820 ------YLKN---KLDTFVNFPILNLDLSKYMKSK---DGESYVYDLFAISNHYGGLGGG 867
Y N K+ + V FP L+L+ ++ SK D +Y+YDL+ + NHYGGLGGG
Sbjct: 923 SNLGNFYFSNGTQKISSMVQFP-HELNLNNFVLSKQAGDNLNYIYDLYGVDNHYGGLGGG 981
Query: 868 HYTAYA 873
HYTAYA
Sbjct: 982 HYTAYA 987
>gi|426347291|ref|XP_004041287.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
32 [Gorilla gorilla gorilla]
Length = 1499
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 297/558 (53%), Gaps = 62/558 (11%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 741 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 800
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R+L S + +VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 801 RELXSGTQKSVAPLKLQWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 860
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S++VD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 861 LKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 920
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L LS C L ++ +LLAEV
Sbjct: 921 PLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLSDLCGLNAEQ-ILLAEV 978
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRF-----------DRKQGGKIKLE--IVNRWQ 603
+ I F ++ ++ S+ + A+ + G I E ++ R
Sbjct: 979 HGSNIKNFPQDNQKVRLSVSG--FLCAFEIPVPASPISASSSTQTDGFINTEKNVIMR-- 1034
Query: 604 EKSASDYLKGSERK---LFGAPLV----TYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
Y S++ LFG PL+ + ++ L A + I VS+L SPL +S
Sbjct: 1035 ---TELYFLSSQKNRPSLFGMPLIVPCTVHTRKKDLYDA-VWIQVSRLASPLPPQEASNH 1090
Query: 657 AHG-----GKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK-P 710
A G + F V+ + NS C+ ++ CK
Sbjct: 1091 AQDCDDSMGYQYPFTLRVVQKDGNS-------------CAWCPWYRFC------RGCKID 1131
Query: 711 IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLD 770
+D +I V DW L + + + H++ ++ + E I+L SCL
Sbjct: 1132 CGEDRAFIGNAYIAV--DWDPTALHLRYQTSQERVVDEHESVEQSRRAQAEPINLDSCLR 1189
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTF 828
AF +EE LG ++M+YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++
Sbjct: 1190 AFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KI 1247
Query: 829 VNFPILNLDLSKYMKSKD 846
V FP + D S ++ +D
Sbjct: 1248 VKFPRESFDPSAFLVPRD 1265
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|384494264|gb|EIE84755.1| hypothetical protein RO3G_09465 [Rhizopus delemar RA 99-880]
Length = 1034
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 196/598 (32%), Positives = 298/598 (49%), Gaps = 44/598 (7%)
Query: 4 RDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCG 63
R+SS+ E G L P ++ I+ L+ EG ++LIS W+ W++Y
Sbjct: 17 RESSI-EEEEVGRALKIDPKDQVNIITQLQKDH---FSEGQTWYLISKNWFTRWKQYCS- 71
Query: 64 DEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYV 123
SP + PGPI+N I+Q D ++ +L +
Sbjct: 72 --------RLGSPEQDARKIGEQTSPGPINNQSILQ--------PDGKLVEDLVLDESVF 115
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKL---IDSRD--NSQTVI 178
VP+ W+ L WY +++ + NE VE++ K+ IDS + NS
Sbjct: 116 AVPEDAWKNLVEWYGTKSEPIERLVIKRSENELTVELYPPTFKVFPVIDSTNDWNSNPQF 175
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
LS+ ++ L V + + ++ + + SP T+ + LQ +
Sbjct: 176 TLSENSTILDLLTSVKESLDLSEDAKILQIHLLDDEPNSP------TITSSSLQNSTQLD 229
Query: 239 LEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF 298
LE + G+S+ N + +V + +R P+ + + S F + F
Sbjct: 230 LE-NLFAGVSLSGQCN-IGVVITDDAR-------FPSKNAAKQSDSSSVSSTSSVFANVF 280
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEIN 357
++ + N +G + GLQNLGNTCFMNSALQCL +TP L ++FL D Y +E+N
Sbjct: 281 NNLTTNPPASNPHSNYTRG-VCGLQNLGNTCFMNSALQCLSNTPQLTKWFLADNYKNELN 339
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLGM G++A A+G+L+ +LW + APR FK + +F F GY QHD+QELLAF
Sbjct: 340 RDNPLGMKGQVAEAYGELIERLWGGHSHSFAPRDFKYTIGKFNSSFYGYQQHDTQELLAF 399
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
LLDGLHEDLNR+ +KPYIE+ D G DEE+A W H+ARNDS+IVD+FQGQ+KS L+
Sbjct: 400 LLDGLHEDLNRIVKKPYIELPDFDGMKDEEIAQRSWDYHRARNDSVIVDLFQGQFKSKLI 459
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
C C VS+TFDPFMYL+LPLP TV + + VTL K L
Sbjct: 460 CSECKNVSVTFDPFMYLSLPLPIKKKSKTTVVYVPYDPTQRIQRMIVTLNKDASIAHLQK 519
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIK 595
++ + LL+ E+++++I++ F E +++I + I Y+ + K K
Sbjct: 520 EVARMMSVDDPSTLLVVELFSNKIYKIFPQ-YEPVATIGGSDIIYIYQLPGRLPSKKK 576
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 27/202 (13%)
Query: 695 SFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDD-VHELYDPSY------------ 741
S++ + T ++++ C P +I++ G+ I LL+WT +++ S
Sbjct: 835 SYKPTSTKQKVT-CPP---STIIRQGEGI--LLEWTSKKARQIFGESQQGSMNGVSTSGW 888
Query: 742 --IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKL 799
I++L + + + + ++L CLD F EE L +D+WYCP+CK+H+ A KK
Sbjct: 889 SDIEELKDLDEANMNQTDQKNKQVTLSDCLDEFTKEEELSEEDLWYCPKCKKHQMAIKKF 948
Query: 800 DLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE------SYVYD 853
DLW +P+++V HLKRFS+SR ++K+D ++FPI LDL+ + S D E +YD
Sbjct: 949 DLWRMPEIVVVHLKRFSHSRTWRDKIDVLIDFPIEGLDLTDRVLSVDKEILNEENRLIYD 1008
Query: 854 LFAISNHYGGLGGGHYTAYAKV 875
L+A+ HYGGLGGGH AY ++
Sbjct: 1009 LYAVDKHYGGLGGGHCKAYIEL 1030
>gi|344258659|gb|EGW14763.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 471
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 257/493 (52%), Gaps = 80/493 (16%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + Q Q ++N + L+ G +FL+ WY+ WE YV G + +
Sbjct: 28 PDLDEQWRQ-VENGRERPLRAGESWFLVEQHWYKQWEVYVKGGDQDANTF---------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+NS + ++ + +R L EG DYVL+P W L WY
Sbjct: 77 -------PGCINNSGLFEDQ------INWHLREGLLEGDDYVLLPMTSWNYLVSWYGLED 123
Query: 139 GGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKLR 197
P + RK+I + ++VE++ + L L+ D + I+ S S + + +
Sbjct: 124 DQPPIERKVIE--VSGIRKVELYPIELLLVQHSDMETALTIQFSHSDSLDLVLQTAREQF 181
Query: 198 GIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 182 LVEPQEDTRLW-VKNSEGSLDRLCNTQITLLDASLETGQLVIMETRNKDG---------- 230
Query: 257 ALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEK 316
+ S + G N P + D+ + +
Sbjct: 231 -------TWPSAQLCG-------------MNNMP---------EEDEDFQG--------Q 253
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL
Sbjct: 254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 313
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK K Y+
Sbjct: 314 VKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYV 373
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E+ D GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL+
Sbjct: 374 ELCDGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLS 433
Query: 496 LPLPSTVTRTMTV 508
+PLP + R + V
Sbjct: 434 VPLPVSSRRVLEV 446
>gi|444525919|gb|ELV14207.1| Ubiquitin carboxyl-terminal hydrolase 11 [Tupaia chinensis]
Length = 937
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 204/603 (33%), Positives = 304/603 (50%), Gaps = 95/603 (15%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
FL+ WY+ WE YV G + D+ +F PG I+N+ + ++
Sbjct: 74 FLVEQNWYKQWEVYVQGGDQ--DSSTF---------------PGCINNAKLFEDQV---- 112
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFXL 163
+ ++ L EG+DYVL+P W L WY G P + RK++ + N ++VEV+ +
Sbjct: 113 --NWRLKAGLVEGKDYVLLPAAAWHYLVSWYGLEHGQPPIERKVVE--LSNIQKVEVYPV 168
Query: 164 CLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQ------EKARIWDYFNKQRSTS 217
+L+ R + R ++ + T + V EQ E+ R+W N + S
Sbjct: 169 --ELLLVRHSDLRTPRTAQFSHTDSI--DVILRTAREQFLVGPKEETRLW-VKNSEGSLD 223
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALS 277
L + T+ DA L+ Q ++ M++ D
Sbjct: 224 RLCNTHITVLDAALETGQLVI----------METRNKD---------------------- 251
Query: 278 NGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQC 337
G R + T + D+ + + G+ GL NLGNTCFMNSALQC
Sbjct: 252 -GTWPSARLH------VKKTTSEEDEDFQG--------QPGICGLTNLGNTCFMNSALQC 296
Query: 338 LVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKL 396
L + P L + Y +E+N NPLGM GE+A A+ DL+++ WS ++ P FK K+
Sbjct: 297 LSNVPQLTESSPPSRYLEELNFHNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKV 356
Query: 397 ARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNH 456
FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E+ D+ GRPD+EVA E W NH
Sbjct: 357 GHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWLNH 416
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
K RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++PLP + R + V +
Sbjct: 417 KRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSHKRVLEVFFIPMDPR 476
Query: 517 GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIK 576
P + + K G DL +ALS + E +++A+V++H+ ++ ++ E +S I
Sbjct: 477 RKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERMMVADVFSHRFYKLYQL-EEPLSGIL 534
Query: 577 DDEHIVAY----RFDRKQGGKIKLEIVNRWQEKS-ASDYLKGSE-RKLFGAPLVTYLEEE 630
D + I Y R + +G + + + +E++ A DY LFG PL+ + +
Sbjct: 535 DRDDIFVYEVSGRIEAIEGSREDIVVPVYLRERTPARDYNNSYYGLMLFGHPLLVSVPRD 594
Query: 631 HLS 633
S
Sbjct: 595 RFS 597
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H G+ +KK + L C++ F T E L ++
Sbjct: 717 IAIDWEPEMKRRYYDEAEAEGYVKHDCVGYVLKKA---PVRLQECIELFTTVETLEKENP 773
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CK+H+ ATKKLDLWMLP++L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 774 WYCPSCKKHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 833
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 834 KPQNESAPELYKYDLIAVSNHYGGMRDGHYTTFA 867
>gi|340503315|gb|EGR29915.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 752
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/603 (32%), Positives = 296/603 (49%), Gaps = 61/603 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQC+ +T L YFL Y +EIN NPLG +G+L + +
Sbjct: 129 GICGLNNLGNTCFMNSALQCMSNTEYLTYYFLKKYFKNEINLTNPLGTNGKLVKQYSQFI 188
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LW S P K +A F+GY QHDSQE L+F+LDGLHEDLNR+KQK + E
Sbjct: 189 KNLWISTENVFQPLGIKRAIASLQNMFAGYQQHDSQEFLSFILDGLHEDLNRIKQKAFTE 248
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS G D V+ + W NH RN S+IVD+ QGQ+KS + CP C K S+TFDPF+ TL
Sbjct: 249 QIDSNGEYDNIVSKKSWINHLKRNQSIIVDIMQGQFKSKVKCPECGKKSVTFDPFLTCTL 308
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK--DLILALSTACCLKIDEGLLLA 554
P+P + + + + N + T K DL S ++ + LL
Sbjct: 309 PIPHQQLKNIDLYYIFVNNRAVSCAETFYYQSDKNLKVDDLKSYYSRKFKVEKERLLLFM 368
Query: 555 EVYN--HQIFRFFENPAELISSIKDDEHIVAYR---FDRKQGGK--------IKLEIVN- 600
YN +QI + LI +K Y+ F+ Q + ++L +
Sbjct: 369 NQYNGLNQI-----QDSLLIHEVKKQSKNFKYQLILFELDQAKQNDDDILLFVELSVQKS 423
Query: 601 ---RWQEKSASD--------YLKGSERKLFGAPLVTYLEEEHLSGAD-IDIAVSKLLSPL 648
++Q+K + + K + K + L++ + D +D + + L +
Sbjct: 424 HNFQYQKKYYKESYYPRPFIFNKNATSKDIHLRIFECLKQVIIRSKDMLDEDILQDLQNI 483
Query: 649 RRTYSSAKAHGGKENGFLP-EVIDELSNSHNESVETAELEDLCSRELSFQLSLTDER-IS 706
+ Y H K F ++ + +NE E+ C + QL + DER +
Sbjct: 484 NQLYLKHIIHYEKSQKFYQLNIVSNNTQGYNEKCNWCHQEN-CE---NCQLQINDERNLE 539
Query: 707 SCKPIQKDSILKPGKHIKVLLDWTDDVHELY---DPSYIKDLPVVHKTGFTVKKTRQ--E 761
+ KDS+ K + EL +PS P + ++ +Q E
Sbjct: 540 QLMQLNKDSLRKFKLECLFFAQSQINHQELKALENPS-----PEILNQEVLSEQNQQQSE 594
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS--- 818
+++ C + F +E LG D+ WYC CK+H++ATKK+ ++ P +L+ HLKRF +
Sbjct: 595 KTTIYDCFNLFQLKEQLGEDNEWYCSNCKKHQRATKKMKIYRSPQILIIHLKRFKNNAGI 654
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESY--------VYDLFAISNHYGGLGGGHYT 870
+ KL ++FP+ NLD++ Y+ K+ SY +Y+L+ + NH+GG+GGGHYT
Sbjct: 655 MWKGGKLTKIIDFPLENLDITDYVIEKEPPSYYYQNNGKLLYNLYGVVNHFGGIGGGHYT 714
Query: 871 AYA 873
AY
Sbjct: 715 AYC 717
>gi|291220896|ref|XP_002730462.1| PREDICTED: ubiquitin specific peptidase 15-like [Saccoglossus
kowalevskii]
Length = 1624
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 267/521 (51%), Gaps = 95/521 (18%)
Query: 87 ERPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PGPIDN+ +I ++EG L L G+D+ ++P+ VW+ L WY G P
Sbjct: 511 QKPGPIDNTTLIMPETRKVMMLTNEGGRLRKNATLVRGRDFEILPEPVWKALLSWYGGSP 570
Query: 142 ALPRKMI--SEGIVNEKRVEVFXLCLKLIDSRDN-------------------------S 174
ALPR +I S G + +E++ L ++L+ + N S
Sbjct: 571 ALPRNVIIPSNGDPTPE-LELYPLSVRLLRHQANQPRQNTWNAVIGGFSFGAGSYVGTSS 629
Query: 175 QT-------------VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDV 221
T V SK + +Q+Y+ +C+ I E R+WD + + L+
Sbjct: 630 HTNNTPAPPKRYLAYVAAFSKMHTIQQVYDFLCQRLRIRNEDMRLWD-LKDENNPVLLEE 688
Query: 222 SDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHT 281
+ TL+ +Q +Q +L+EV+ + +S + LAL +
Sbjct: 689 ENHTLEHLSIQDNQQVLIEVR-NKDMSWPEEMSSLAL--------------------KNK 727
Query: 282 TGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHT 341
T + NQ P G GL NLGNTCFMNSALQC+ +T
Sbjct: 728 TDKKKNQVPTDK------------------------GATGLSNLGNTCFMNSALQCISNT 763
Query: 342 PDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
L +YF + + E N NPLGM G +A +GDL++ LWS ++AP + + ++A
Sbjct: 764 KPLTKYFNDNMHQYEFNKTNPLGMKGHIAKRYGDLVQDLWSGTSKSIAPLKLRWTIGKYA 823
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
P+F+G+ QHDSQELLAFLLDGLHEDLNRV+ KPY+E+KDS GRPDEEVA+E W+NH RN
Sbjct: 824 PRFNGFQQHDSQELLAFLLDGLHEDLNRVQNKPYVELKDSDGRPDEEVADEAWENHMLRN 883
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPM 520
S+IVD+F GQ +S + C C S+ FDPF YL+LPLP + + + V +G+ +PM
Sbjct: 884 RSVIVDLFHGQLRSLVCCKECGNESVRFDPFTYLSLPLPLDNSMHLEIVVIRLDGT-VPM 942
Query: 521 PFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
+ + L KDL LS C L + LLL EV+ I
Sbjct: 943 KYGLRLNMEDKYKDLKQYLSELCDL-TPQQLLLVEVFGAMI 982
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S + + H + +K + E I L +CL AF EE LG D++W
Sbjct: 1233 IAIDWDPTALHLRYQSSQERVVADHDSVEVSRKLQTEPIDLDTCLKAFTKEEELGEDELW 1292
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
+C +CKEHRQATKKL LW LP +L+ +KRF Y R++K++ V FP D S+++
Sbjct: 1293 FCSKCKEHRQATKKLALWRLPPILIIQMKRFQYVNGRWVKSQ--KIVKFPKRKFDPSRFI 1350
>gi|432118439|gb|ELK38093.1| Ubiquitin carboxyl-terminal hydrolase 11 [Myotis davidii]
Length = 513
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/537 (35%), Positives = 272/537 (50%), Gaps = 83/537 (15%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVC-GDE-PSIDNISFDSPHMN 79
PD + +++ +++G +FL+ WY+ WE YV GDE PS
Sbjct: 25 PDSQWGHIENSDTGRARRMRDGESWFLVDQDWYKQWEVYVREGDEDPST----------- 73
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY-- 137
PG I+N+ + ++ + ++++ L EG+DYVL+ W L WY
Sbjct: 74 --------IPGCINNAKLFEDKI------NWQLKKGLVEGEDYVLLSTTAWNLLVSWYGL 119
Query: 138 -KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
G P + RK++ + E VEV+ + L L D T + + L + +
Sbjct: 120 EHGQPPIERKVVDWRGICE--VEVYPVELLLARHSDMDTTHTAEFSQTDSIDLVLRTAQD 177
Query: 197 RGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGN 254
+ QE+ R+W N + S L + +L A ++ Q +++E + +G
Sbjct: 178 HFVVSPQEETRLW-VKNAEGSFERLCNTRVSLRTASIKSGQLVVMETRSKDGT------- 229
Query: 255 DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG 314
P + +R++ ++ F+ PG
Sbjct: 230 ----WPSQQTRAASSVT---------KEEEEFHGQPG----------------------- 253
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
+ GL NLGNTCFMNSALQCL + P L +YFL + Y DE+N NPLGM GE+A A+
Sbjct: 254 ----ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLDELNFCNPLGMKGEIAEAYA 309
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K
Sbjct: 310 DLVKQAWSGRHRSIVPNVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 369
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
Y+E D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF Y
Sbjct: 370 YVEQCDAAGRPDQEVAVEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGHVSVTFDPFCY 429
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
L++PLP + R M V + P + + K G DL +AL+ + + G
Sbjct: 430 LSVPLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCMALAKHTGVSPERG 486
>gi|299744855|ref|XP_001831310.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
gi|298406320|gb|EAU90473.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
Length = 1315
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 303/595 (50%), Gaps = 92/595 (15%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
E+ Q+V KN+ + G ++L+S W++ W R V G+S
Sbjct: 115 EKWQLVDRAKNKP---MTAGETWYLVSREWWKLWARAV-----------------GGLSD 154
Query: 84 KRAERP----GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
K A P GP+DNS ++ + G + EG VP +VW WY
Sbjct: 155 KEAPVPENEVGPVDNSPLLDASGRLTPG--------VVEGVQVEFVPAEVWSHFDSWY-- 204
Query: 140 GP---ALPRKMISEGIVNEKRV-EVFXLCLKLID-SRDNSQT--------VIRLSKKAST 186
GP A+PR++I G+ V E++ +K+ SRD+++ I++S +
Sbjct: 205 GPANHAIPRRVIERGMFGTTTVLELYPAEIKVFRLSRDSAEKAAAGPHYPTIQVSMGDTL 264
Query: 187 RQLYEKVC---KLRGIEQEKARIW-------DYFNKQRSTSPLDVSDQTLDD--AMLQMD 234
+ L +V K+ R+W D+ + TS L+ +D + D L +
Sbjct: 265 KDLCTRVADAVKIDPTVDTPYRVWRPTAVPDDWRSIDFPTSSLEDADAKVIDESPHLLEN 324
Query: 235 QDIL------LEVQVDNGISMDS-TGNDLALVPIEP------SRSSLTIAGGPALSNGHT 281
Q+I+ +E + +G +D+ + IEP S++S G + S T
Sbjct: 325 QNIMSGDAFIVEFKQPDGWLIDTQAAAKKPVAAIEPPPPLFDSKNSFFNRLGTSSSTVAT 384
Query: 282 TGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHT 341
T + + F + + K E G L GL N+GNTCFMNSALQCL HT
Sbjct: 385 TKA------STELSTAFTKPTISINKSSFTKTLEPGTL-GLGNMGNTCFMNSALQCLAHT 437
Query: 342 PDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSG--RAAVAPRAFKGKLAR 398
+L +YFL G + E+N +NPLGM G++A FG LL ++W+S + +PR FK L R
Sbjct: 438 KELTEYFLNGVFKAELNRDNPLGMQGQIAEVFGALLERIWASSGPSTSYSPREFKQTLQR 497
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKN 455
FAPQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E D G D E +A + W+
Sbjct: 498 FAPQFSGYQQHDSQELVAFLLDGLHEDLNRVIKKPYVEKPDWEGGGDAELVKLAAKSWEG 557
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
+ RNDS+IVD+FQGQY+STLVCP C K+SITFDPFMYLTLPLP V + T+FY
Sbjct: 558 YMLRNDSVIVDLFQGQYQSTLVCPECEKISITFDPFMYLTLPLP--VQKKWKHTIFYVPW 615
Query: 516 SGLPMPFT---VTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
L P + + + +DL L I E LL+ E++ H+ ++ ++
Sbjct: 616 D-LEKPHVKVPIEINRDSSFRDLRNVLGRWVG-AIPENLLMLEIFQHKFYKLLDD 668
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 85/135 (62%), Gaps = 20/135 (14%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL+ F+ EE LG DD+WYCP CK+H+QATKK DLW PD+LV HLKRFS +
Sbjct: 945 QRRGITLQDCLEEFVKEEQLGEDDLWYCPSCKKHQQATKKFDLWKAPDILVVHLKRFSNN 1004
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYDLFAIS 858
R L++K+DTFV+FP+ LDL + + E VYDLFA+
Sbjct: 1005 RILRDKIDTFVDFPVEGLDLGDKVGERAVATRLKEQGVELEELKTVNLDEPLVYDLFAVD 1064
Query: 859 NHYGGLGGGHYTAYA 873
H GGLGGGHY AYA
Sbjct: 1065 EHMGGLGGGHYRAYA 1079
>gi|71020237|ref|XP_760349.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
gi|46099973|gb|EAK85206.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
Length = 1427
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 207/624 (33%), Positives = 306/624 (49%), Gaps = 84/624 (13%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
T E+ ++ +KN L L G++++L+S +WYR W+ S D P
Sbjct: 222 TGQEQLDRIRPMKN---LPLHTGDVWYLVSRKWYRRWDAACTERRDSDPAEKLDVPI--- 275
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY-KG 139
GPIDNSD++ + S + ++ + E DY ++P++ W+ L WY
Sbjct: 276 ---------GPIDNSDLLDPDSTSF----VRLKSGINEHVDYEMLPEEGWKLLVAWYGSS 322
Query: 140 GPALPRKMISEGIVNEKRVE----VFXLCLKLIDSRDNSQTVIRLSKKAST--------- 186
GPA RK+I ++ VE +F L + D V S ST
Sbjct: 323 GPAFARKVIDGRCPGQESVEFYPPIFRLLRLVEDDSTQGSGVPPFSLSVSTSLAELKAMV 382
Query: 187 ------------------------RQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVS 222
++L + +++E I D + + +VS
Sbjct: 383 KMAFNLGQVADVDIRLYFFPEPSDQELQSGLVGFARLDEEGVSIIDAREDKPDSYQPNVS 442
Query: 223 DQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLT---IAGGPALSNG 279
+++ + +++ ++L+E++ D P E + SS+ G SN
Sbjct: 443 LRSI--GIEEIEVNLLVEIRQSGRWQTDP-------APAEATASSVKGVFAQQGDFFSNL 493
Query: 280 HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKK---GEKGGLAGLQNLGNTCFMNSALQ 336
+ GS+ + TA G GL GL NLGNTCFMNSALQ
Sbjct: 494 QQSSSVIASASGSATSVPSAEAQGRVTRSQTATDRSMGRSRGLRGLNNLGNTCFMNSALQ 553
Query: 337 CLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL +T +L QYF+ G Y +E+NT+NPLGM G +A AFG+L+ +W+ + PR FK
Sbjct: 554 CLSNTYELQQYFVSGAYKEELNTDNPLGMGGAIAEAFGNLITNIWNGQGGSFWPREFKFA 613
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---ANEC 452
L+RFAPQFSGY QHDSQELLAFLLDGLHEDLNR+ +KPYIE D G ++++ A
Sbjct: 614 LSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKKPYIEAPDWEGGDEKDLVAFAKRQ 673
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W +KARNDS+IVD+FQGQY+STLVCP CSKVSI FDPFMYLTLP+P+ V
Sbjct: 674 WDIYKARNDSVIVDLFQGQYRSTLVCPDCSKVSIKFDPFMYLTLPIPNRKMWRGQVYFVP 733
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ F V L L ++ ++ L+ EV++H+I+++ ++ LI
Sbjct: 734 LDAGQSMHKFQVLLPAGSTVGKLRQKVAAQFGIETKR-LVCGEVWHHRIYKWIDDYEPLI 792
Query: 573 SSIKDDEHI------VAYRFDRKQ 590
+KD + + A RF +++
Sbjct: 793 -DVKDGDFVYFWEVPTAPRFSKQR 815
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 87/157 (55%), Gaps = 37/157 (23%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
R + +S+ C+D F EE LG DD WYCP CKE RQATKK DLW PD+LV HLKRFS
Sbjct: 1128 ARTKTLSIEDCMDEFTREEQLGEDDPWYCPSCKEFRQATKKFDLWKAPDILVVHLKRFSA 1187
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS------------KDGESY--------------- 850
R+ ++KL+ V+FP+ LDL+ ++ K GE
Sbjct: 1188 GRHSRDKLNMLVDFPLEGLDLTDRVEGTQALRRVQEEAEKSGEELSESMLGSGILRPLED 1247
Query: 851 ----------VYDLFAISNHYGGLGGGHYTAYAKVNA 877
+YDL+A+ NH+GGLGGGHYTA+AK A
Sbjct: 1248 NDDAVAVDRPIYDLYAVDNHFGGLGGGHYTAFAKSPA 1284
>gi|440791317|gb|ELR12560.1| putative ubiquitin carboxylterminal hydrolase 11, putative
[Acanthamoeba castellanii str. Neff]
Length = 1170
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 312/621 (50%), Gaps = 100/621 (16%)
Query: 19 PCTPDEERQIVQDL-KNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P P EER++V+ L +Q + + G Y++++ +W++ W+ YV +E + D+ H
Sbjct: 27 PLAPSEERRVVKTLLDDQEAVKMTVGATYYVVNFKWWQLWQHYVGWNEGNSDDDGGTEGH 86
Query: 78 MNGVSSKR----AERPGPIDNSDIIQNGNGSSEG-------------------------- 107
+G + +RPGPIDN++++++G+ + +G
Sbjct: 87 HHGTEAASHHAARQRPGPIDNTELLEDGSATVKGPGEESDSGEDSEEEEERKSNGGAAGA 146
Query: 108 -------DDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVE- 159
+ +RR L + DY L P V+ ++ WY P + RK+I+ GI + +VE
Sbjct: 147 KKASKQPQEESLRRGLVKDVDYTLFPSSVFRHIYSWYGCSPVVGRKVITVGIFQKLQVEL 206
Query: 160 ---VFXLCLKLIDSRDNSQTVI------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYF 210
V C K + S + R S A+ + + V I K++++
Sbjct: 207 HPIVLLCCNKAATTHAQSDSPSYKMEEHRFSLTAALKDVRRYVAGQYMIPPHKSKLYLAV 266
Query: 211 -NKQRSTSPLDVS--DQTLDDAMLQMDQDILLEVQ-VDNGISMDSTGNDLALVPIEPSRS 266
N ++ L+ S QTL+D + Q ++L+ +D G ++ + + P + S
Sbjct: 267 DNSMQNLRLLEESALGQTLEDLGIASGQILVLQSHGIDIGDRSYTSYSSGSSRPSSWNYS 326
Query: 267 SLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLG 326
+ A G L+ G T GL NLG
Sbjct: 327 PVGNAVGKPLARGAT---------------------------------------GLHNLG 347
Query: 327 NTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
NTCFMNSALQCL +T L ++FL + + EIN NPLGM GELA FG+LL LWS
Sbjct: 348 NTCFMNSALQCLSNTTPLLRFFLNNAHLAEINPTNPLGMKGELAKKFGELLVNLWSGKYT 407
Query: 386 AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE-MKDSGGRP 444
V PR FK L++FAPQF+GY QHDSQELL+F+LDG+HEDLNR+ QKPY E ++
Sbjct: 408 TVVPREFKSVLSKFAPQFAGYQQHDSQELLSFVLDGIHEDLNRIIQKPYTEKLEFENSDN 467
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
++ A W H RN+S++VD F GQ KST+VC C VS+TFDPF++L+LP+PS R
Sbjct: 468 NDAQAQMSWDTHLMRNNSVVVDHFHGQLKSTVVCQHCGHVSLTFDPFVFLSLPVPSKNQR 527
Query: 505 TMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
+ V +F+ + + P+ + V + K G KDL L+ + E L++AE+Y FR
Sbjct: 528 IINVVLFWRDRN--PVKYGVRVSKMGTIKDLKDRLARLVDVG-PERLVMAEIYT---FRP 581
Query: 565 FENP-AELISSIKDDEHIVAY 584
F+ P A+ + I+ + I AY
Sbjct: 582 FKIPDAKPLFDIRSSDLIFAY 602
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 18/162 (11%)
Query: 722 HIKVLLDWTDDVHELYDPSYIKDLPVVHKTGF----TVKKTRQE---AISLFSCLDAFLT 774
++ + +DW DV + ++PV +K F ++KKT + +SL CL F
Sbjct: 753 NVGIAIDWDKDV--------LNNIPV-NKKEFEEHESLKKTEADEELCVSLDDCLRMFTA 803
Query: 775 EEPLGPDDMWYCPQCKEHR-QATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
+E L WYC CK A K++D+W P VL+ HLKRF Y+ ++K+ T V+FP+
Sbjct: 804 DELLEDGSPWYCSVCKATGGSAQKRIDVWKCPPVLIVHLKRFQYTHVFRDKVGTKVDFPV 863
Query: 834 LNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDLS Y+ D + +YDL+A+SNH G LG GHYTA+ K
Sbjct: 864 TGLDLSPYVNQLDPAKPPIYDLYAVSNHIGSLGSGHYTAFTK 905
>gi|256072742|ref|XP_002572693.1| ubiquitin-specific peptidase 4 (C19 family) [Schistosoma mansoni]
Length = 945
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 258/502 (51%), Gaps = 100/502 (19%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER-PGPIDNS 95
++++ +G+L++++S W+ WE +V DS +G+ + +E PG +DNS
Sbjct: 51 NVEITKGDLWYILSLNWWTKWEEFV------------DSVSKSGIVDETSEEYPGKVDNS 98
Query: 96 DIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLF-----CWYKGGPALPRKMISE 150
DI+ +G +++ NL D L+P+ VW KLF C + R+ I
Sbjct: 99 DILYDG---------KLKENLLLESDITLIPRNVW-KLFVDFYGCTHTDISVFERRAIQA 148
Query: 151 GIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV-CKLRGIEQEKARIWDY 209
E +E++ + NS + L+E CK + I + KA + +
Sbjct: 149 PKSAE--IEIYPPHYSFYLNPSNSSATL----------LFEGTYCKFQTIRELKAIVAQH 196
Query: 210 F-------------NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
N+Q L+ D T+++ L+ ++ I ++++ NGI D + N
Sbjct: 197 LKAAPGVNVHLSIHNEQNEFEELEDEDATIEETNLEREKVIFVQLEPRNGIRSDISVNSS 256
Query: 257 AL-----VPIEPSRSSLTIAG-GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNT 310
L + +P L++ G GP L
Sbjct: 257 RLKSNDSIGSQPESQMLSLHGSGPPLV--------------------------------- 283
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
G+ GL NLGNTCFMNSALQC+ + P L YFL G + E+N NPLG G +A
Sbjct: 284 ------PGVCGLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIA 337
Query: 370 LAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ DL+++LWS RA PR FK ++AR A QFSGY QHD+ ELL FLLDGLHEDLNR+
Sbjct: 338 TAYADLIKQLWSGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGLHEDLNRI 397
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPYIE+KDS GRPD EVANE W+ +K+RNDS+IVD+F GQ KST++CP C + S+TFD
Sbjct: 398 HSKPYIEVKDSDGRPDIEVANEAWEYYKSRNDSIIVDLFHGQLKSTVICPTCQRKSVTFD 457
Query: 490 PFMYLTLPLPSTVTRTMTVTVF 511
PF L LP+ T+ V V+
Sbjct: 458 PFASLILPIQEVYKYTVRVYVW 479
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
E + L C + F E LG D+WYC +CK + ATKK DLW LPDVLV LKRF
Sbjct: 728 ETLKLSDCFERFTDIEQLGSRDLWYCSRCKAEKPATKKFDLWKLPDVLVVQLKRFRSHLR 787
Query: 821 LKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K+DT + FP+ L+L S+ ++ K E ++YDL A+SNH G LGGGHYTA+A
Sbjct: 788 FHDKIDTLLEFPLTGLNLTSRVLEKKPDEKFIYDLVAVSNHMGYLGGGHYTAFA 841
>gi|164656707|ref|XP_001729481.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
gi|159103372|gb|EDP42267.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
Length = 1232
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 294/602 (48%), Gaps = 88/602 (14%)
Query: 28 IVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAE 87
+V++++ + G+ +++I WY W+ G+++ E
Sbjct: 108 LVREVETWRASQPRIGDTWYVIPADWYERWKV-----------------KPQGIAAMNLE 150
Query: 88 RPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRK 146
+ N NG+ +R++L E DY LVP Q W+ L Y+ GPAL R
Sbjct: 151 A--------LCTNDNGNVTARYRPLRQDLVEHADYELVPAQAWDILASRYRIHGPALGRS 202
Query: 147 MISEGIVNEKRVEVFXLCLKLIDSRDNSQT------------------VIRLSKKASTRQ 188
++ + R+E+F C++L ++ + +RLS S R
Sbjct: 203 VVPGQAPGQARIELFPPCIELAVCGESPEVEPFRSAAASIASSTSLLPTVRLSSGVSLRT 262
Query: 189 LYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTL--DDAMLQMDQDILLEVQVDNG 246
L V + + + +F S +++ + A+ + D I L D+
Sbjct: 263 LKAHVRAMHLCPRHEDAHVRFFRLPPSLKLTALTEHGMLSKQALAKADPPIELVEGTDDA 322
Query: 247 I--SMDST------GNDLALVPIEPSRS--------SLTIAGGPALSNGHTTGYRFNQYP 290
S+D T G D+ + RS + AL HT+ R P
Sbjct: 323 TLASLDLTAPSVFLGIDVRVRTASDPRSFTWQVSTTTSDTGTTDALPTSHTSS-RTAITP 381
Query: 291 GSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL- 349
+F + GL GL NLGNTCFMNSALQCL +T +L QYFL
Sbjct: 382 APAFLPSLAP------PAQHGSTARPCGLRGLANLGNTCFMNSALQCLSNTHELQQYFLN 435
Query: 350 GDYSDEINTENPLGMHGELALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQ 408
G DE+NT+NPLGM G LA+A+G L+ LWS S AV PR FK LARFAPQF GY Q
Sbjct: 436 GVQMDELNTDNPLGMGGTLAMAYGRLVSALWSESASGAVVPREFKTTLARFAPQFMGYAQ 495
Query: 409 HDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---ANECWKNHKARNDSLIV 465
DSQELLAFLLDGLHEDLNR+ +KPYIE D G D ++ A + W +KARNDS+IV
Sbjct: 496 QDSQELLAFLLDGLHEDLNRIHKKPYIEAPDWIGGSDADMVRFAQQQWDLYKARNDSVIV 555
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS------GLP 519
D+FQGQY+STLVCP C KVS+ FDPFMYLTLP+P+T V V + + +
Sbjct: 556 DLFQGQYRSTLVCPTCHKVSVKFDPFMYLTLPIPNTRKWRGRVYVVPQHAAQPLVQVDVQ 615
Query: 520 MPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDE 579
+P T T+ + +L++ AC LL+ EV+++ ++R+ E E +S I +
Sbjct: 616 LPATATVAELRTKVADLLSMDPAC-------LLMGEVWSYHVYRWLEA-FEPVSDISASD 667
Query: 580 HI 581
+I
Sbjct: 668 YI 669
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 32/150 (21%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K R + L CLD F E LG +D+WYCP C++ RQATKK DLW +PD+LV HLKRFS
Sbjct: 929 KRRAPKLRLDDCLDEFTRAEQLGENDLWYCPACRDFRQATKKFDLWKVPDILVVHLKRFS 988
Query: 817 YSRYLKNKLDTFVNFPILNLDL------------------SKYMKSKDG----------- 847
R ++KLD ++ FP+ +LDL M+ K+G
Sbjct: 989 AGRGTRDKLDNWIEFPLEHLDLRDRVVGTRLWHSLRMERAPSQMQLKEGLIVSHDTHDDD 1048
Query: 848 ---ESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ VYDL+A+ NH+GGLGGGHYTA+AK
Sbjct: 1049 VLADEPVYDLYAVDNHFGGLGGGHYTAFAK 1078
>gi|353231065|emb|CCD77483.1| ubiquitin-specific peptidase 4 (C19 family) [Schistosoma mansoni]
Length = 872
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 258/502 (51%), Gaps = 100/502 (19%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER-PGPIDNS 95
++++ +G+L++++S W+ WE +V DS +G+ + +E PG +DNS
Sbjct: 51 NVEITKGDLWYILSLNWWTKWEEFV------------DSVSKSGIVDETSEEYPGKVDNS 98
Query: 96 DIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLF-----CWYKGGPALPRKMISE 150
DI+ +G +++ NL D L+P+ VW KLF C + R+ I
Sbjct: 99 DILYDG---------KLKENLLLESDITLIPRNVW-KLFVDFYGCTHTDISVFERRAIQA 148
Query: 151 GIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV-CKLRGIEQEKARIWDY 209
E +E++ + NS + L+E CK + I + KA + +
Sbjct: 149 PKSAE--IEIYPPHYSFYLNPSNSSATL----------LFEGTYCKFQTIRELKAIVAQH 196
Query: 210 F-------------NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL 256
N+Q L+ D T+++ L+ ++ I ++++ NGI D + N
Sbjct: 197 LKAAPGVNVHLSIHNEQNEFEELEDEDATIEETNLEREKVIFVQLEPRNGIRSDISVNSS 256
Query: 257 AL-----VPIEPSRSSLTIAG-GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNT 310
L + +P L++ G GP L
Sbjct: 257 RLKSNDSIGSQPESQMLSLHGSGPPLV--------------------------------- 283
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
G+ GL NLGNTCFMNSALQC+ + P L YFL G + E+N NPLG G +A
Sbjct: 284 ------PGVCGLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIA 337
Query: 370 LAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ DL+++LWS RA PR FK ++AR A QFSGY QHD+ ELL FLLDGLHEDLNR+
Sbjct: 338 TAYADLIKQLWSGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGLHEDLNRI 397
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPYIE+KDS GRPD EVANE W+ +K+RNDS+IVD+F GQ KST++CP C + S+TFD
Sbjct: 398 HSKPYIEVKDSDGRPDIEVANEAWEYYKSRNDSIIVDLFHGQLKSTVICPTCQRKSVTFD 457
Query: 490 PFMYLTLPLPSTVTRTMTVTVF 511
PF L LP+ T+ V V+
Sbjct: 458 PFASLILPIQEVYKYTVRVYVW 479
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
E + L C + F E LG D+WYC +CK + ATKK DLW LPDVLV LKRF
Sbjct: 728 ETLKLSDCFERFTDIEQLGSRDLWYCSRCKAEKPATKKFDLWKLPDVLVVQLKRFRSHLR 787
Query: 821 LKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K+DT + FP+ L+L S+ ++ K E ++YDL A+SNH G LGGGHYTA+A
Sbjct: 788 FHDKIDTLLEFPLTGLNLTSRVLEKKPDEKFIYDLVAVSNHMGYLGGGHYTAFA 841
>gi|170086692|ref|XP_001874569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649769|gb|EDR14010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 331/673 (49%), Gaps = 95/673 (14%)
Query: 19 PCTP-DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P +P D + ++LKN++ ++ G ++L++ W++ W+
Sbjct: 100 PMSPLDRVSFVEKELKNRT---MQVGETWYLVAMDWWKRWK------------------- 137
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
G + + GPI D+ N S D + L EG + VP+ VW WY
Sbjct: 138 --GACTGEVRKDGPISEQDLGPVDNASLFFPDETLLFPLGEGVEVQYVPEIVWTSFVTWY 195
Query: 138 KGGP--ALPRKMISEGIVNEKRVEVFXLCLKLI---------DSRDNSQTVIRLSKKAST 186
G P +PR++I+ G +E++ L LK S ++ + +S +
Sbjct: 196 -GPPQQPVPRRVIARGSAKLPSLELYPLQLKAFRLVREDPQAGSNESPFPKLVISAGETV 254
Query: 187 RQLYEKVCKLRGIEQEKA---RIW------------DYFNKQRSTSP---LDVSDQTLDD 228
L ++ K E R+W +Y + Q + S ++ S +TL++
Sbjct: 255 GNLCSELVKAVSPNLETHIPYRVWKLENGHGEWEYGEYPSSQLTISGGKIIEESHKTLEE 314
Query: 229 AMLQMDQDILLEVQVDNGI--SMDSTGNDLALVPIEPSRSSL-TIAGGPALSNGHTTGYR 285
+Q D ++E + D I S L P+ S+ G L++ T+ Y+
Sbjct: 315 EGIQADDAFVVEFKQDTWIVEPPKSAAKSLGPPPLFSSKDGFFNKLGRKTLASSTTSSYK 374
Query: 286 FNQYPGSSFGSTFMDMDDGY--DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPD 343
G F S G+ + + K + G GL N+GNTCFMNSALQCL HT +
Sbjct: 375 ----SGGDFYSGLSSKSSGFPLSTGKSITKALEPGTLGLGNMGNTCFMNSALQCLAHTKE 430
Query: 344 LAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSS--GRAAVAPRAFKGKLARFA 400
L+ YFL G + DE+N NPLGM G +A FG LL ++W++ + +PR FK +L RFA
Sbjct: 431 LSDYFLTGVFQDELNPGNPLGMGGAIAEVFGALLERIWATEGPSNSYSPREFKTQLQRFA 490
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE---VANECWKNHK 457
PQFSGY QHDSQEL+AFLLDGLHEDLNRV +KPY+E D G E +A + W+ +
Sbjct: 491 PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGDHLELVRLAQKSWEGYM 550
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY----A 513
RNDS+IVD+FQGQY+STLVCP C KVSITFDPFMYLTLPLP V + T+FY +
Sbjct: 551 LRNDSVIVDLFQGQYQSTLVCPECQKVSITFDPFMYLTLPLP--VQKKWKHTIFYIPWDS 608
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELIS 573
+ + + +P V + + KDL L + D LL E++NH+ ++ ++ L
Sbjct: 609 DKAHVKIP--VEINRDSSFKDLRNLLGRWMGVPAD-NLLTMEIFNHRFYKNLDD-TLLCG 664
Query: 574 SIKDDEHIV------------AYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER-KLFG 620
+ + + IV Y+ D K + + + + + ++S Y+ S LFG
Sbjct: 665 DMSESDVIVCFELPCHAQQSRTYKKDPKDPFIVPVFLCD--AKPASSTYMTSSRTPTLFG 722
Query: 621 APLVTYLEEEHLS 633
P V ++ E +
Sbjct: 723 YPTVVVIDREQAT 735
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 88/135 (65%), Gaps = 20/135 (14%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R + ISL CLD F EE LG DD+WYCP+CK+H+QATKK DLW PD+LV HLKRFS S
Sbjct: 931 RDKGISLQDCLDEFTKEERLGEDDLWYCPRCKKHQQATKKFDLWKAPDILVVHLKRFSNS 990
Query: 819 RYLKNKLDTFVNFPILNLDLS----------KYMKSKDG----------ESYVYDLFAIS 858
R L++K+D F++FPI LDLS K + + +G E VYDLFA+
Sbjct: 991 RALRDKIDAFIDFPIEGLDLSEMVGERAVAKKLLAAGNGVDELGLGSLDEPLVYDLFAVD 1050
Query: 859 NHYGGLGGGHYTAYA 873
H GGLGGGHY AYA
Sbjct: 1051 EHMGGLGGGHYRAYA 1065
>gi|19076030|ref|NP_588530.1| CSN-associated deubiquitinating enzyme Ubp12 [Schizosaccharomyces
pombe 972h-]
gi|25167323|sp|O60079.1|UBP12_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 12;
AltName: Full=Deubiquitinating enzyme 12; AltName:
Full=Ubiquitin thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|3184060|emb|CAA19303.1| CSN-associated deubiquitinating enzyme Ubp12 [Schizosaccharomyces
pombe]
Length = 979
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 310/639 (48%), Gaps = 75/639 (11%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP ++++ I + + NQ +L+L + + Y L S WY Y+ D P
Sbjct: 50 LPSIAEQKQLIGELVNNQPELELGQVDNYIL-SYSWYERLCSYLAEDGPF---------- 98
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PGP+D DI G+ ++ +L+E D+ ++ + VW+ L WY
Sbjct: 99 -----------PGPVDQEDIADLETGT-------LKPDLQEEIDFTIISRDVWDLLVRWY 140
Query: 138 K-GGPALPRKMISEG------IVNEKRVEVFXLCLKLIDSRDNSQT----VIRLSKKAST 186
GP PR+ ++ G +V E +F L L ++ D +++ I LS K++
Sbjct: 141 GLKGPEFPRETVNLGSESHPHLVVEVYPPIFSLTLLSTNAVDANESHKPKKISLSSKSTL 200
Query: 187 RQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG 246
L E V + ++ R+W Q +D S + ++++ +++ ++
Sbjct: 201 EDLLEGVKYTLSLPSDQFRLWRVDTDQPLHRTIDPS------SFIKINSKEIIDF-LEKS 253
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
++ G D + + + T AL R NQ
Sbjct: 254 KTLVELGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQ------------------ 295
Query: 307 SYNTAKKGEK--GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
S N +K EK G GL NLGNTC+MNSALQCL HT +L +F D + +++N NPLG
Sbjct: 296 SSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLG 355
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M G++A F L++ L+S ++ APR FK + +F F GY Q DSQE LAFLLDGLH
Sbjct: 356 MGGQVASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLH 415
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVAN---ECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
EDLNR+ QKPY D +E++ N ECW+ HK RNDSLIVD+FQG Y+STLVCPV
Sbjct: 416 EDLNRIYQKPYTSKPDLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPV 475
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL-MKHGCCKDLILAL 539
C+ VSITFDPFM LTLPLP + TVT A+ + P+ V L K +DL+ +
Sbjct: 476 CNTVSITFDPFMDLTLPLPVKQVWSHTVTFIPADTNLTPLAIEVVLESKAATIEDLVKYV 535
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAE-LISSIKDDEHIVAYRFDR--KQGGKIKL 596
+ +L+ E Y + +RF ++ L+ I +++ I Y +R + G L
Sbjct: 536 AEKSGCSDYRKILVTETYKGRFYRFLTQLSKSLLMEISEEDEIYLYELERPYEDGSDDIL 595
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGA 635
V + S + + FG P V L + ++ A
Sbjct: 596 VPVYHISDDSTNSANSYMSSRDFGHPFVLQLSDNEVTDA 634
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 92/144 (63%), Gaps = 8/144 (5%)
Query: 739 PSYIKDLPVVHKTGFTVKKTRQE---AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
P + L + KT + KK E I+L CLD F E LG +D WYCP CKE RQA
Sbjct: 798 PQMGRSLWLESKTILSDKKDDSEDSRTITLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQA 857
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKY-----MKSKDGESY 850
+K++++W P++L+FHLKRFS R ++K+D V FPI NLD+S + K+
Sbjct: 858 SKQMEIWRCPEILIFHLKRFSSERRFRDKIDDLVEFPIDNLDMSMRTGSYKLSEKENPKL 917
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+Y+L+A+ NHYGGLGGGHYTA+AK
Sbjct: 918 IYELYAVDNHYGGLGGGHYTAFAK 941
>gi|330791239|ref|XP_003283701.1| hypothetical protein DICPUDRAFT_26301 [Dictyostelium purpureum]
gi|325086324|gb|EGC39715.1| hypothetical protein DICPUDRAFT_26301 [Dictyostelium purpureum]
Length = 1003
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 312/649 (48%), Gaps = 96/649 (14%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE-PSIDNISF--------- 73
E+R+I++DL Q G +IS W R W+ YV DE P I+
Sbjct: 7 EQRKIIKDLWVQQSFQF--GETVNIISMIWLRQWKNYVKYDESPLINGNGNNSENGHNEQ 64
Query: 74 --DSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWE 131
+ +N + +P IDN ++++ + SEG+ + + R L E D+ +VP +VW
Sbjct: 65 QQNGKGVNHHHEFESPKPETIDNRELLEGID--SEGNPI-MDRKLNEKTDFEIVPSKVWS 121
Query: 132 KLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKL---------IDSRDNSQTV----- 177
+L WY+GGP + R +I+ G +E VE+ + + I SR+ +Q
Sbjct: 122 QLIQWYQGGPEIKRTVITLGFKDELYVEIKPYLINVKYHTSLISEIPSRNQNQQQQQTPY 181
Query: 178 ---IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMD 234
+ S K++ +L E + K I + +S P+ +L+D +
Sbjct: 182 LYSYQRSLKSTLAELRETIAKNENINPNHLEFYKNSTSGKS-KPIKKITMSLEDLKFEDK 240
Query: 235 QDILLEVQVDN---GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPG 291
D++L Q + GIS G + G GH +G Y
Sbjct: 241 TDLILHYQTEQTQKGIS--KLGKKIT---------------GIFKKKGHGSGMGGRSYSD 283
Query: 292 SSFGSTFMDMD--------------------DGYDSYNTAKKGEKGGLAGLQNLGNTCFM 331
S+ + ++ + D ++ + + GL NLGNTCFM
Sbjct: 284 PSYYTNGVNGGGSSSSSSSTSSNSNESSPTFENIDPKSSKEIVLSNKICGLSNLGNTCFM 343
Query: 332 NSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPR 390
NS+LQCL HT L +YFL G Y+ +IN NPLGM G++A +G L++ +W+ VAP+
Sbjct: 344 NSSLQCLAHTIPLTEYFLSGKYACDINKTNPLGMKGQIAEIYGKLMKDMWTGSSNCVAPK 403
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG--RPDEEV 448
K + ++APQFSG +Q DSQE L+FLLDGLHEDLN+V +KPY E K+ R D V
Sbjct: 404 HLKWIIGKYAPQFSGMSQQDSQEFLSFLLDGLHEDLNKVLKKPYTEEKEESKEQREDAVV 463
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W+NH RN S+IV++FQGQYKSTL C CSKVSITFDP+MY+TLP+P R V
Sbjct: 464 AAEHWENHIKRNQSIIVNLFQGQYKSTLTCSKCSKVSITFDPYMYVTLPIPVPTERLFDV 523
Query: 509 TVFYA----------------NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLL 552
+F N + P+ + + L K + L + LS ++ +
Sbjct: 524 ILFRRKPIEQLGPDPNGIYCLNNAMAPIKYCLKLPKREDVETLRVELSKITGIE-SSCIA 582
Query: 553 LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
LAE ++I+ F + L+ SIKD E +AY ++ +++R
Sbjct: 583 LAETLKNRIYTFLNDQKSLL-SIKDKEVTIAYELPHAGEDISRIHVMHR 630
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 17/161 (10%)
Query: 725 VLLDWTDDVHELYD---------PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTE 775
+ +DW ++ + D P I+D + K+ F + I+L+ CL F
Sbjct: 806 IAIDWRPEIIKYVDFIDHDDPTSPFTIQDKSIQLKSEF------RNDITLYDCLSIFTKN 859
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL--KNKLDTFVNFPI 833
E L +D WYCP CK H +ATKKL+LW P +LV HLKRF Y+ Y K++ +V+FP+
Sbjct: 860 EELKKNDTWYCPDCKAHIEATKKLELWSAPKILVIHLKRFQYTSYTHRHEKINYYVDFPL 919
Query: 834 LNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
NLD+SK + +K VY L+AISNH G +G GHYT+ K
Sbjct: 920 DNLDISKLVLNKSYPPPVYQLYAISNHMGVMGSGHYTSCVK 960
>gi|290996750|ref|XP_002680945.1| ubiquitin specific hydrolase [Naegleria gruberi]
gi|284094567|gb|EFC48201.1| ubiquitin specific hydrolase [Naegleria gruberi]
Length = 966
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 271/522 (51%), Gaps = 67/522 (12%)
Query: 89 PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMI 148
PG IDN+ ++ + +S+G V+ ++E QDY ++P+ +W W+ GGPA+PRK +
Sbjct: 96 PGTIDNTHLV---DETSDGI-YRVKDEVQEQQDYEIIPEHIWNLFHSWFGGGPAIPRKSV 151
Query: 149 SEG-----IVNEKRVEVFXLCLKLIDSRDNSQTV-IRLSKKASTRQLYEKVCKLRGIEQE 202
+ I V + + L + + V SK A+ +Q+ ++V + I+
Sbjct: 152 IQNPEAYRISYTVEVRPCEISVALQTTSNQLDWVDFEFSKNATIKQVMDQVKREFNIQSR 211
Query: 203 KARIWD--YFNKQRSTSPLDVSDQTLDDAM-LQMDQDILLEVQVDNGISMDSTGNDLALV 259
+ ++W Y + V DQTL++A+ + Q ++EV N +
Sbjct: 212 ECKLWKTIYNSPHEEVDLSVVEDQTLENALERKTGQRFIVEV----------GPNWIIEP 261
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
P+ S +++ + TT + +Y + G+
Sbjct: 262 PVAESYNAIRSMTNNKVQISGTTAQQKKRYDSAP-----------------------PGV 298
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTCFMNS LQCL H+P L +YFL DYS EIN NPLGM G +ALAFG L+++
Sbjct: 299 CGLSNLGNTCFMNSGLQCLTHSPVLYRYFLENDYSKEINETNPLGMGGAVALAFGALMKE 358
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+WS + +P FK + ++APQF+GY Q DSQEL++F+LDGLHEDLNR+++KP
Sbjct: 359 MWSGENSYFSPNDFKRVIGKYAPQFAGYQQQDSQELISFILDGLHEDLNRIQKKPATNPV 418
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
++ GR D VA E W HK RNDS+IVD FQGQ KSTL CP C SI FDPFMYL+LP+
Sbjct: 419 EAKGREDSVVAQESWDVHKLRNDSIIVDKFQGQLKSTLHCPKCDNFSIIFDPFMYLSLPI 478
Query: 499 PSTVTRTMTVTVF----------------YANGSGLPMPFTVTLMKHGCC---KDLILAL 539
P R + V VF + S +P T + K G +D +L L
Sbjct: 479 PIEKNRLINVMVFSNSTFPNEVESTLDSDLSKLSNMPTRLTCKVSKTGSVSQLRDNVLEL 538
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
+ + +L E+++++++++ + + IS I D + I
Sbjct: 539 LGLNTNEDHDRCVLYEIFSNKVYKYLSD-GDSISGILDADII 579
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 93/119 (78%), Gaps = 1/119 (0%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
K ++ EAI+++ CLD + ++E LG +D WYCP CKEH +ATKK D+W PDVLV HLKRF
Sbjct: 811 KISQSEAINIYQCLDLYTSKEKLGANDTWYCPSCKEHVEATKKFDIWKAPDVLVVHLKRF 870
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
S+S Y ++K+D F+++PI +LD+S ++ KD + YDLFA+S+H+GGLGGGHYTA AK
Sbjct: 871 SFSSYSRDKIDRFIDYPIQDLDISSFVHCKDL-NLKYDLFAVSDHFGGLGGGHYTACAK 928
>gi|339236929|ref|XP_003380019.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
gi|316977237|gb|EFV60365.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
Length = 802
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 252/481 (52%), Gaps = 74/481 (15%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQN 100
K+ +++++I ++W + Y D VSS + PGPIDNS I++
Sbjct: 31 KDNDIWYIIDSQWLDDFAAYYKED---------------SVSSSTTKPPGPIDNSRILEV 75
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNE-- 155
S+E ++ L E +D+ ++P W+KL Y G + RK+IS N+
Sbjct: 76 RPNSNEQ---TLKDGLRENEDFYIIPTDAWDKLVEKYGLVSGQKPIARKVISRYSSNKTE 132
Query: 156 -KRVEVFXLCLKLIDSRDNSQT-VIRLSKKASTRQLYEKVCKLRGIEQEKARIW-----D 208
+ VEV+ L L + D S + LS ++ L V ++ E R++ D
Sbjct: 133 YRYVEVYPLELTVYKHNDRSNIKQLTLSIASTFDDLIRAVNSAFDLDLENFRLYVKLEGD 192
Query: 209 YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
F +P D S L + L Q I+++ Q D SM + + S+ +
Sbjct: 193 LF---ELINPKDTS-TFLYELDLSPKQTIVIDTQEDGKWSMAN---------VSSSKQVV 239
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNT 328
T + P+L P + S GL GL NLGNT
Sbjct: 240 TGSSSPSL-------------PAAQHISL-----------------ATPGLCGLTNLGNT 269
Query: 329 CFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAV 387
CFMNS +QCL + P L++YFL + Y DE+N +NPLGM GELA A+ D++ +WS
Sbjct: 270 CFMNSTIQCLSNIPPLSRYFLSEQYIDELNEKNPLGMRGELARAYADVICNMWSGRHYTY 329
Query: 388 APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE 447
PR FK + RF P FSGY Q DSQEL+AFLLDGLHEDLNR+K+KPY+ KDS RPDEE
Sbjct: 330 MPRMFKNTVGRFQPMFSGYQQQDSQELMAFLLDGLHEDLNRIKKKPYVVAKDSEDRPDEE 389
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
+A E W+++K RNDS+I+D+F G KST+VCP C KVSITFDPF YL+LPLP R +
Sbjct: 390 LATEAWRSYKLRNDSIILDLFHGLLKSTVVCPECDKVSITFDPFCYLSLPLPEKSDRLLV 449
Query: 508 V 508
+
Sbjct: 450 I 450
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SR +NK+DT V+FPI NLD+SK+ +KD E +YDL +ISNHYGGLG GHYTA+AK
Sbjct: 690 SRSFRNKIDTLVSFPITNLDMSKWCIAKDCEPALYDLVSISNHYGGLGSGHYTAFAK 746
>gi|390336152|ref|XP_798688.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like
[Strongylocentrotus purpuratus]
Length = 1197
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 299/620 (48%), Gaps = 83/620 (13%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPL----GMHGEL 368
G GL+GL+N GNTCFMN+ +QCL +T LA+YF L Y ++++ L G GE+
Sbjct: 349 GRVPGLSGLRNHGNTCFMNAIVQCLSNTDILAEYFVLEQYREDLSHSKKLSKKFGTKGEV 408
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
LL+ +WS + FK +AR Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 409 TEQLAVLLKAIWSCKYSPHHTTEFKRIVARHGSQYRGNDQHDAQEFLIWLLDKVHEDLNS 468
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
K+K Y ++K+ + DE +A E NH RN+S + D+FQ QY+S+L CP C K S TF
Sbjct: 469 AKKK-YKQLKNGQNKSDELMAAESLANHMRRNNSFVQDLFQAQYRSSLTCPHCGKQSNTF 527
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF+ ++LP+P TR + V V YA+ + F + L G DL +++ C + +
Sbjct: 528 DPFLCVSLPIPQRTTRVIIVVVIYADRDPRVVRFGIVLETSGTVADLRSTIASTCSIAVT 587
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK-----QGGKIKLEI---VN 600
++L EVY +R F + + +S + D + I A Q ++K + N
Sbjct: 588 R-IVLTEVYFDGFYRSFGD-TQPLSDVHDGDSIYAVETPHNSHSMLQNSQVKPYLHVHCN 645
Query: 601 RWQEKSASDYLK----GSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
R E + G K FG P+ ++ +S + + + K + SS
Sbjct: 646 RPVEVITMVIINQQGTGRNGKRFGQPMAIEVDRN-VSHEQLTLIILKAMG-----CSSGN 699
Query: 657 AHGGKENGFLPE---VIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQK 713
A + G + + VID + H + F+ + + + +Q
Sbjct: 700 ADKIMQLGPVLQLGIVIDAKGSRH---------------YIPFEEARAMHNATITRMLQG 744
Query: 714 DSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAI--SLFSCLDA 771
S H+K +++W D+ ++ + H+T + + Q+ + SLF C+D
Sbjct: 745 TSEEGGPPHVKAIVEWERDIRTMFCQRAMSIYIEEHETVQRERSSHQQPVRASLFDCIDL 804
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
+ EE LG D+ W C CK +Q TK+L LW LP+VL+ HLKRF + KL T V+F
Sbjct: 805 YTQEEKLGEDNAWNCSHCKRFQQGTKRLTLWTLPEVLILHLKRFKQVGSARTKLSTQVDF 864
Query: 832 PILNLDLSKYMKSK--------DGESY-----------------------------VYDL 854
PI NL++ +Y++ + +G S VYDL
Sbjct: 865 PIHNLNMGQYIEHRRMSQGLPMNGNSQAALLNSLTAWSPWKQQGGRRRSTTLVGDNVYDL 924
Query: 855 FAISNHYGGLGGGHYTAYAK 874
+A+ NH G L GGHYTA+ K
Sbjct: 925 YAVCNHSGSLTGGHYTAFCK 944
>gi|13529494|gb|AAH05470.1| Ubiquitin specific peptidase 11 [Mus musculus]
Length = 699
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 204/325 (62%), Gaps = 13/325 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+
Sbjct: 33 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLV 92
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 93 KQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 152
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 153 LCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 212
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + V + P V + K G DL +ALST + D+ +++A+V
Sbjct: 213 PLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADV 271
Query: 557 YNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDY 610
++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 272 FSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRD 328
Query: 611 LKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 329 YNNSYYGLILFGHPLLVSVPRDRFS 353
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D+ Y + V H G+ +KK+ + L C+ F T E L ++
Sbjct: 480 IAMDWEPDMKRRYYDEVEAEGYVKHDCVGYMLKKS---PVQLKECIKLFTTVETLEKENP 536
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S+ + KLDT V FPI +LD S+++
Sbjct: 537 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVI 596
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 597 KPKNESSPDLYKYDLIAVSNHYGGMRDGHYTTFA 630
>gi|342319397|gb|EGU11346.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 1438
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 208/637 (32%), Positives = 319/637 (50%), Gaps = 101/637 (15%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + + V + + + L+EG+ ++++ W R W+ G + S D+ + +P
Sbjct: 135 PDMQLEFVNEARKKR---LEEGDSWYIVPRAWLRRWQAACSGVQESKDDDASLTP----- 186
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GG 140
E+ GPID + ++ + G ++R+ L G D +VP + W L WY G
Sbjct: 187 -----EQVGPIDTT-VLYDEKG-------DLRKPLTLGVDVEVVPGEAWGYLTSWYGLVG 233
Query: 141 PALPRKMISEGIVNEKRVE----VFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
+ R +++ + +E VF L L + S + +V S Y
Sbjct: 234 TSFERDVVAPAGPGSETIEFYPPVFHLYLLVPTSSPPNASVTLPSLPTPPTVSYASSGVF 293
Query: 197 RGIEQEKA---------RIWD-----------------YFNKQRSTS-----PLDVSDQT 225
+ ++ A R+W + +K R T P + D T
Sbjct: 294 STLVEDAALAFELPRPVRLWRLPPISDELSAHEGAAYVFTDKLRETGVELLDPNQIDDDT 353
Query: 226 -LDDAMLQMDQDIL-LEVQVDNGISM---------------DSTGNDLALVPIEPSRSSL 268
L DA+L D+ L +E Q ++G M D+ ++ A E +S+
Sbjct: 354 TLQDALLTDDETHLAVEQQNEDGTWMVDAEALMTALAAAETDAPPSEAAPPLPEEDKSAT 413
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD----------------GYDSYNTAK 312
+G S G ++G + PG G+ + + K
Sbjct: 414 KKSGIGIFSGGWSSGLHKPKTPG--LGAGKEKEKEKPKGGNGGGILGAAMGALTRSKSTK 471
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALA 371
+G++G L GLQNLGNTCFMNSA+QC+ +T +L +YFL G Y E+N ENPLGM G++A A
Sbjct: 472 QGQRG-LVGLQNLGNTCFMNSAIQCMSNTKELQEYFLSGVYHSELNRENPLGMRGQVAEA 530
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
FG L+ +LW+ ++VAPR FK LARFAPQFSGY Q DSQELLAFLLDG HEDLNR+K+
Sbjct: 531 FGQLIERLWNGTGSSVAPREFKQALARFAPQFSGYGQQDSQELLAFLLDGTHEDLNRIKK 590
Query: 432 KPYIEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
KP E D G D+E+ A CW+ +++RNDS+IVD+FQGQY+ST+VCP C KVSITF
Sbjct: 591 KPATEAPDWEGGGDKEMVELAKTCWEQYRSRNDSVIVDLFQGQYRSTVVCPDCDKVSITF 650
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPFMY+T LP T + + V + + + + + K G K L A+ + ID
Sbjct: 651 DPFMYVTTNLPVTKKWSGRIIVVPLDAARGTLAVDLEVPKSGSIKTLKAAVGQ--LVDID 708
Query: 549 -EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
+ L++ E ++ + ++ + N E ++ I ++ I+ Y
Sbjct: 709 PKRLIITEEWHGKFWKDW-NDDESVTEIGGNDTIIMY 744
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 92/136 (67%), Gaps = 18/136 (13%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K ++ I+L CL F EE LG DDMWYC +CKE +QATKK++LW +PDVLVF LKRFS
Sbjct: 1085 KGAKKVITLSDCLTEFTKEERLGEDDMWYCSRCKEFKQATKKVELWKVPDVLVFALKRFS 1144
Query: 817 YSRYLKNKLDTFVNFPILN-LDLSKYMKS-----------------KDGESYVYDLFAIS 858
R+ + K+D V+FP+L+ LD+ ++++ + +S VYDL+A+S
Sbjct: 1145 SGRWSREKIDDLVDFPVLDGLDMEQFVQGDKVEQRLAQQMPDAPAISEPDSLVYDLYAVS 1204
Query: 859 NHYGGLGGGHYTAYAK 874
NH+GGLGGGHYTA+AK
Sbjct: 1205 NHFGGLGGGHYTAFAK 1220
>gi|114205510|gb|AAI05614.1| Usp11 protein [Rattus norvegicus]
Length = 728
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 204/325 (62%), Gaps = 13/325 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+
Sbjct: 62 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLV 121
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 122 KQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 181
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 182 LCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 241
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + V + P V + K G DL +ALST + D+ +++A+V
Sbjct: 242 PLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADV 300
Query: 557 YNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDY 610
++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 301 FSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRD 357
Query: 611 LKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 358 YNNSYYGLILFGHPLLVSVPRDRFS 382
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H G+ +KK + L C+ F T E L ++
Sbjct: 509 IAMDWEPEMKRRYYDEVEAEGYVKHDCVGYMLKKN---PVQLKECIKLFTTVETLEKENP 565
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S++ + KLDT V FPI +LD S+++
Sbjct: 566 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFVI 625
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 626 KPKNESAPDLYKYDLIAVSNHYGGMRDGHYTTFA 659
>gi|123452201|ref|XP_001314204.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121896411|gb|EAY01563.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 813
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 245/869 (28%), Positives = 395/869 (45%), Gaps = 105/869 (12%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
T +E+ + +++L+ S + +++G ++IS +W +++ + ++ FD ++
Sbjct: 5 TKEEQAERLKNLERTSSISVEDGA--YIISAKWMINYKAAIGFNQ-------FDPANV-- 53
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
GPIDNS+I N S V + E D+ +V + W+ L+ WY
Sbjct: 54 -------EVGPIDNSEIADPENKS------RVAKTKGENTDFYIVDKTEWDVLYGWYGCN 100
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIE 200
+ +++ + + N+ V+ L ++ + I + K + + K +L I
Sbjct: 101 NIIKLEVVMDEVENKPISIVYYQKLTVVYGEEKKD--IEVHKYMYAKDILAKARELFNIP 158
Query: 201 QEKA-RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE-VQVDNG--ISMDSTGNDL 256
+K ++ DY N + + MD+D L+ + +G I+++ +
Sbjct: 159 ADKQLQLIDYLN---------------GNYVALMDEDSYLKRYNLIDGQLIAVNYKDEND 203
Query: 257 ALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEK 316
+P++ L+ G T + S +G D+G K G
Sbjct: 204 EWKIKKPTQVEYLT----KLAMGSTPTTAASTTMRSRYG-----YDEG-------KPGRH 247
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDL 375
G NLGNTC+ NS QCL+HT L QYF+ G + IN EN LG HG LA AF +
Sbjct: 248 G----FNNLGNTCYFNSGTQCLMHTMPLIQYFVDGRWEQWINRENKLGSHGCLATAFNSI 303
Query: 376 LRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
+++WS + A+ P K + F +FSGY QHDS EL+ F+LDG+HEDLNR K KP
Sbjct: 304 CQQMWSDNTSGAIRPSELKAAIGGFNSRFSGYEQHDSHELILFMLDGIHEDLNRCKVKPQ 363
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E G DE +A+E WK K RNDS+IVD F G +S L+CP C K ++ FDPF+ +
Sbjct: 364 VEPVIGDGANDEAIADESWKRCKLRNDSIIVDHFYGLLRSQLLCPNCQKTTVVFDPFLTV 423
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK-DLILALSTACCLKIDEGLLL 553
LPL R + V+ + F + + +LI L + K E L +
Sbjct: 424 ELPLARENERKIHVSFIPKDIKAKWTEFNINIRTSEIANVNLISKLVSEKLGK--EVLCI 481
Query: 554 AEVYNHQIFRF-FENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLK 612
N + F F P S ++ V + D + + + IV + +Y
Sbjct: 482 PAALNTENFSIKFGFPDTYESRLQ----AVVFEIDSQDKFYVPVLIVGSVASQYNPNYFN 537
Query: 613 GSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDE 672
+ P + +++ L V + L P+ T S + +N FL + E
Sbjct: 538 A---QPITPPFLIEVDDLSLEEDKYKDIVLERLKPVLDTKSEIELTEDAKN-FLARIKKE 593
Query: 673 LSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL----LD 728
E E E ++FQ K +Q KP KH+K +
Sbjct: 594 ----PEEGQEAPEF------AVNFQKDY-------WKNVQSP---KPSKHVKCASANGVV 633
Query: 729 WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQ 788
T D+ +L ++++P + G++ K T + I L C + F T + L + W+CP
Sbjct: 634 VTADISKLDMNVLVQNVP-SNAYGYSSKHTSTDTIPLDRCFNLFSTVDTLDEQNQWHCPH 692
Query: 789 CKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE 848
C + A KK+++W P+VLV HLKRFS Y K T V+FP LD++ Y++ K +
Sbjct: 693 CGQFVCADKKMEIWRCPEVLVIHLKRFSGEGYYVKKDSTLVDFP-EELDMAPYIRGKTDQ 751
Query: 849 SYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
S Y L+A+S H G +GGGHY A+A VN
Sbjct: 752 STHYKLYAVSEHMGSMGGGHYIAHAIVNG 780
>gi|47213596|emb|CAG07262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1000
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/330 (46%), Positives = 202/330 (61%), Gaps = 26/330 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL +TP L +YFLG+ Y DE+N NPLGM GE+A A+ D++
Sbjct: 280 GVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLGNSYLDELNFTNPLGMKGEIAEAYADVV 339
Query: 377 RKLWSSGRAAVAPRAFK-------GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+++WS +V PR FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRV
Sbjct: 340 KQIWSGRHYSVVPRIFKVQNAGCETKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRV 399
Query: 430 KQKPYIEMKDSGGRPDE------------EVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
K K YIE++D+ GRPD+ EVA E W+NH+ RNDS+IVD F G +KSTL+
Sbjct: 400 KNKEYIELRDADGRPDQTDGRLALCSPAQEVAEEAWRNHRRRNDSVIVDTFHGLFKSTLI 459
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C K+S+TFDPF YL++PLP + R M V + P V + K G DL
Sbjct: 460 CPECRKISVTFDPFCYLSIPLPVSKERVMEVFFVSLDPYAKPAQHRVVVPKAGRVSDLCA 519
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLE 597
ALS + + +++A+V+NH+ ++ + E +S I D + I Y ++ + L
Sbjct: 520 ALSETTGVPPSQ-MVVADVFNHRFYKIY-TCDEALSCILDRDDIFVYELSAREEEPVLLA 577
Query: 598 IVNRWQEKSASDYLKGSER---KLFGAPLV 624
+ R + DY GS LFG PL+
Sbjct: 578 LYLR-ERSHYRDYGSGSSSYGTTLFGHPLL 606
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+Q + L C++ F T E L ++ WYCP CK+H+ ATKKLDLW LP+VL+ HLKRFSY+
Sbjct: 753 QQTTVQLQECIELFTTVETLEEENPWYCPVCKKHQLATKKLDLWSLPEVLIIHLKRFSYT 812
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESY----VYDLFAISNHYGGLGGGHYTAYAK 874
++ + KL++ V+FP+ NLD S ++ K+ S YDL A+SNHYGGL GHYT+YA+
Sbjct: 813 KFTREKLESVVDFPLRNLDFSGFLLRKNVPSQEPPSRYDLIAVSNHYGGLRDGHYTSYAR 872
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 41/190 (21%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDSPHMNGV 81
+ +R+ + L Q +L+ G+ ++++ RWY W+++V GD+ ++ SF
Sbjct: 16 ETQRREIDSLLRQ--CELRAGDAWYMVECRWYEQWKQFVETGDQ---NSSSF-------- 62
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG IDN+++ ++ D ++ L E +D+VLVP + W KL WY
Sbjct: 63 -------PGQIDNTELFEDL------DSYHIKERLVENEDFVLVPAEAWHKLLSWYGMVD 109
Query: 139 GGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRG 198
G P L RK V +E+F LCL + +N+ T + S+ S + VC+
Sbjct: 110 GQPPLERK------VEVYPIELF-LCLH--SNMENAVTA-QFSRTDSIYTIQRAVCEAFA 159
Query: 199 I-EQEKARIW 207
+ E + R+W
Sbjct: 160 VPEGSECRLW 169
>gi|426257123|ref|XP_004022184.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 2 [Ovis
aries]
Length = 802
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 205/324 (63%), Gaps = 11/324 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 141 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLGMKGEIAQAYADLV 200
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P+ FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 201 KQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 260
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 261 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 320
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 321 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGIS-PERMMVADV 379
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 380 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLR-ERTPARDY 437
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS 633
LFG PL+ + + LS
Sbjct: 438 NSSYYGLMLFGHPLLVSVPRDRLS 461
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ + Y + V H G+ +KK + L C++ F T E L ++
Sbjct: 582 IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVQLQECIELFTTVETLEKENP 638
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYCP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 639 WYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 698
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
+S Y YDL A+SNHYGGL GHYT +A
Sbjct: 699 KPQNDSARELYKYDLIAVSNHYGGLRDGHYTTFA 732
>gi|307103883|gb|EFN52140.1| hypothetical protein CHLNCDRAFT_139272 [Chlorella variabilis]
Length = 1046
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 191/545 (35%), Positives = 268/545 (49%), Gaps = 80/545 (14%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSS- 105
F++S +W+ W +Y + P + A RPGPIDNSD++ +S
Sbjct: 36 FVVSNKWFSGWCQYSGFVYDPVRKKPKVVPQQ-----EPAPRPGPIDNSDLVAEPPSTSD 90
Query: 106 -----EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRK--MISEGIVNEKR 157
+ + VR L + + +V + W L WY GP + R+ M I E +
Sbjct: 91 LTSEQQAGVVVVRDQLVDKHHFWMVHEPTWNLLKEWYGCKGPEVRREYHMAGHRIQLEAQ 150
Query: 158 VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTS 217
+ + + + + + + V+ S +L C G+E + ++DY Q+ +
Sbjct: 151 QQHYRVIARPAGAEEQ-EAVVGCSAMCKLSELKTMACSAMGLEADDYDVYDYRRCQQGAN 209
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALS 277
+ +TL LQ Q +L L+P
Sbjct: 210 LEATTYKTLTGNKLQDQQAVL-------------------LLP----------------- 233
Query: 278 NGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQC 337
R Q P + D D YD+ A+ GLAGL NLGNTCFMNS+LQC
Sbjct: 234 -------RGRQAP------PWAD-DVVYDAPGRAR-----GLAGLGNLGNTCFMNSSLQC 274
Query: 338 LVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKL 396
L H+ L Q FL G Y ++N +NPL + G+LALAFG L+ KLW G V+P+ FK +L
Sbjct: 275 LAHSLPLMQTFLTGAYKRDLNKDNPLSLGGKLALAFGALMDKLWRGGVGHVSPKLFKWQL 334
Query: 397 ARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNH 456
A+F PQFSGY Q DSQELLAFLLDGLHEDLNR+ KPYIE KDS GRPDEEVA E W N+
Sbjct: 335 AKFCPQFSGYAQEDSQELLAFLLDGLHEDLNRITDKPYIEDKDSDGRPDEEVAAEAWANY 394
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
+ RNDS+IVD FQG Y+S L CP C S+ YL+LPLPS+ R +T T + +G+
Sbjct: 395 RRRNDSVIVDAFQGLYRSVLTCPQCEYQSVK-----YLSLPLPSSKMRGVTFTAVFVDGT 449
Query: 517 GLPMPFTVTLMKHGCCKDLILALSTACCLKID--EGLLLAEVYNHQ--IFRFFENPAELI 572
P + + + K L ++ L + E +LL +N F + + +
Sbjct: 450 VAPRTYGIEVPKSATVGQLYAGIAELLGLATEAPEDVLLLTQFNMSDASFAVYADSKARV 509
Query: 573 SSIKD 577
SSI+D
Sbjct: 510 SSIED 514
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 109/172 (63%), Gaps = 16/172 (9%)
Query: 720 GKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQ--EAISLFSCLDAFLTEEP 777
G+ + ++ +W D +LYDP + D +K R ++++L CL+ FL E
Sbjct: 745 GQPLLLVAEWQDAAGQLYDPHPLLDAEKDASALALAEKQRDGGKSVTLAECLETFLQPEQ 804
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLD 837
L +D WYC +CK+H QA KKLDLW LPDVLV HLKRFSYSRY ++KLDT V+FP+ +LD
Sbjct: 805 LDAEDRWYCGKCKQHVQADKKLDLWSLPDVLVVHLKRFSYSRYSRDKLDTLVDFPLRDLD 864
Query: 838 LSKYMKSKD--------------GESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++ Y++S+ S YDL+A+SNHYGG+GGGHYTAY ++
Sbjct: 865 MTPYLRSRQQHAHPAQQQQQSDPARSTRYDLYAVSNHYGGMGGGHYTAYCRM 916
>gi|148668417|gb|EDL00741.1| ubiquitin specific peptidase 11, isoform CRA_b [Mus musculus]
Length = 434
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 204/325 (62%), Gaps = 13/325 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+
Sbjct: 101 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLV 160
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 161 KQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 220
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 221 LCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 280
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + V + P V + K G DL +ALST + D+ +++A+V
Sbjct: 281 PLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADV 339
Query: 557 YNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDY 610
++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 340 FSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRD 396
Query: 611 LKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 397 YNNSYYGLILFGHPLLVSVPRDRFS 421
>gi|26339726|dbj|BAC33526.1| unnamed protein product [Mus musculus]
Length = 366
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 204/325 (62%), Gaps = 13/325 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+
Sbjct: 33 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLV 92
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 93 KQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 152
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 153 LCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 212
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + V + P V + K G DL +ALST + D+ +++A+V
Sbjct: 213 PLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADV 271
Query: 557 YNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDY 610
++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 272 FSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRD 328
Query: 611 LKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 329 YNNSYYGLILFGHPLLVSVPRDRFS 353
>gi|26327595|dbj|BAC27541.1| unnamed protein product [Mus musculus]
Length = 699
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/325 (45%), Positives = 203/325 (62%), Gaps = 13/325 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSA QCL + P L +YFL + Y +E+N NPLGM GELA A+ DL+
Sbjct: 33 GICGLTNLGNTCFMNSAQQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADLV 92
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 93 KQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 152
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 153 LCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 212
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + V + P V + K G DL +ALST + D+ +++A+V
Sbjct: 213 PLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVADV 271
Query: 557 YNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASDY 610
++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 272 FSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSRD 328
Query: 611 LKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 329 YNNSYYGLILFGHPLLVSVPRDRFS 353
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 95/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D+ Y + V H G+ +KK+ + L C+ F T E L ++
Sbjct: 480 IAMDWEPDMKRRYYDEVEAEGYVKHDCVGYMLKKS---PVQLKECIKLFTTVETLEKENP 536
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S+ + KLDT V FPI +LD S+++
Sbjct: 537 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTLVQFPIRDLDFSEFVI 596
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GHYT +A
Sbjct: 597 KPKNESSPDLYKYDLIAVSNHYGGMRDGHYTTFA 630
>gi|226487492|emb|CAX74616.1| ubiquitin thiolesterase [Schistosoma japonicum]
gi|226487494|emb|CAX74617.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 919
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 265/522 (50%), Gaps = 85/522 (16%)
Query: 38 LDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER-PGPIDNSD 96
+++ +G+L++++S W+ WE +V D +G+ + +E PG +DNSD
Sbjct: 27 VEMVKGDLWYILSLNWWAKWEVFV------------DLVSKSGIVDETSEEYPGKVDNSD 74
Query: 97 IIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK 156
I+ +G +++ NL D LVP+ VW KLF + G + +
Sbjct: 75 ILCDG---------KLKENLLLENDITLVPKDVW-KLFVDFYGCVHTETSLFERRAIQAP 124
Query: 157 R---VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYF--- 210
+ +E++ + NS + T Y CK + I + K + +
Sbjct: 125 KSAEIEIYPPHYSFYLNSPNSNPTLL------TEGTY---CKFQTIRELKLLVAQHLKMA 175
Query: 211 ----------NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP 260
N+Q L+ D T+++A L+ ++ I ++++ NGI + V
Sbjct: 176 PGLTLHLLIHNEQNEFEELEDEDATIEEANLEREKVIYVQLEPKNGIRSE------IYVD 229
Query: 261 IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLA 320
++S ++ P L G PG +
Sbjct: 230 NSRAKSIDSVKSRPELQMVSLHGSNPPLVPG---------------------------VC 262
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMNSALQC+ + P L YFL G + E+N NPLG G +A+A+ DL+++L
Sbjct: 263 GLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIAIAYADLIKQL 322
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
WS RA PR FK ++AR A QFSGY QHD+ ELL FLLDGLHEDLNR+ KPYIE+KD
Sbjct: 323 WSGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGLHEDLNRIHSKPYIEVKD 382
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
S GRPD EVANE W+ +K+RNDS+IVD+F GQ KST++CP C + S+TFDPF L LP+
Sbjct: 383 SDGRPDIEVANEAWQYYKSRNDSIIVDLFHGQLKSTVICPTCQRKSVTFDPFASLILPIQ 442
Query: 500 STVTRTMTVTV--FYANGSGLPMPFTVTLMKHGCCKDLILAL 539
+ V V + N S L + +T+ C +++I AL
Sbjct: 443 EVYKYLVRVYVWPWVPNKSQL-LLLELTVQTIPCAQNIIEAL 483
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ + L C + F E LG D+WYC +CK + ATKK DLW LPDVLV LKRF
Sbjct: 701 QTLQLSDCFERFTDVEQLGSRDLWYCNRCKAEKPATKKFDLWKLPDVLVVQLKRFRSHLR 760
Query: 821 LKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K+DT + FP+ L+L S+ ++ K E ++YDL A+SNH G LGGGHYTA+A
Sbjct: 761 FHDKIDTLLEFPLTGLNLTSRVLEKKPDEKFIYDLVAVSNHMGYLGGGHYTAFA 814
>gi|226487496|emb|CAX74618.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 933
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 265/522 (50%), Gaps = 85/522 (16%)
Query: 38 LDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER-PGPIDNSD 96
+++ +G+L++++S W+ WE +V D +G+ + +E PG +DNSD
Sbjct: 41 VEMVKGDLWYILSLNWWAKWEVFV------------DLVSKSGIVDETSEEYPGKVDNSD 88
Query: 97 IIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK 156
I+ +G +++ NL D LVP+ VW KLF + G + +
Sbjct: 89 ILCDG---------KLKENLLLENDITLVPKDVW-KLFVDFYGCVHTETSLFERRAIQAP 138
Query: 157 R---VEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYF--- 210
+ +E++ + NS + T Y CK + I + K + +
Sbjct: 139 KSAEIEIYPPHYSFYLNSPNSNPTLL------TEGTY---CKFQTIRELKLLVAQHLKMA 189
Query: 211 ----------NKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP 260
N+Q L+ D T+++A L+ ++ I ++++ NGI + V
Sbjct: 190 PGLTLHLLIHNEQNEFEELEDEDATIEEANLEREKVIYVQLEPKNGIRSE------IYVD 243
Query: 261 IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLA 320
++S ++ P L G PG +
Sbjct: 244 NSRAKSIDSVKSRPELQMVSLHGSNPPLVPG---------------------------VC 276
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMNSALQC+ + P L YFL G + E+N NPLG G +A+A+ DL+++L
Sbjct: 277 GLNNLGNTCFMNSALQCMSNVPALTSYFLSGKWKSELNIRNPLGSQGRIAIAYADLIKQL 336
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
WS RA PR FK ++AR A QFSGY QHD+ ELL FLLDGLHEDLNR+ KPYIE+KD
Sbjct: 337 WSGTRAYAVPREFKIEIARIARQFSGYAQHDTHELLVFLLDGLHEDLNRIHSKPYIEVKD 396
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
S GRPD EVANE W+ +K+RNDS+IVD+F GQ KST++CP C + S+TFDPF L LP+
Sbjct: 397 SDGRPDIEVANEAWQYYKSRNDSIIVDLFHGQLKSTVICPTCQRKSVTFDPFASLILPIQ 456
Query: 500 STVTRTMTVTV--FYANGSGLPMPFTVTLMKHGCCKDLILAL 539
+ V V + N S L + +T+ C +++I AL
Sbjct: 457 EVYKYLVRVYVWPWVPNKSQL-LLLELTVQTIPCAQNIIEAL 497
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ + L C + F E LG D+WYC +CK + ATKK DLW LPDVLV LKRF
Sbjct: 715 QTLQLSDCFERFTDVEQLGSRDLWYCNRCKAEKPATKKFDLWKLPDVLVVQLKRFRSHLR 774
Query: 821 LKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K+DT + FP+ L+L S+ ++ K E ++YDL A+SNH G LGGGHYTA+A
Sbjct: 775 FHDKIDTLLEFPLTGLNLTSRVLEKKPDEKFIYDLVAVSNHMGYLGGGHYTAFA 828
>gi|308081762|ref|NP_001183969.1| ubiquitin carboxyl-terminal hydrolase 11 [Canis lupus familiaris]
Length = 770
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 204/324 (62%), Gaps = 11/324 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A+ DL+
Sbjct: 100 GICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPLGMKGEIAEAYADLV 159
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+E
Sbjct: 160 KQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVE 219
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL++
Sbjct: 220 LCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSV 279
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R M V + P + + K G DL +AL+ + E +++A+V
Sbjct: 280 PLPVSHKRVMEVFFVSMDPRRKPEQHRLVVPKKGKISDLCVALAKHTGMS-PERMMVADV 338
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFD-RKQGGK-----IKLEIVNRWQEKSASDY 610
++H+ ++ ++ E +SSI D + I Y R G+ + L I R + A DY
Sbjct: 339 FSHRFYKIYQL-EESLSSILDRDDIFIYEVSGRSAIGENSREDVVLPIYLR-ERTPARDY 396
Query: 611 LKGSE-RKLFGAPLVTYLEEEHLS 633
LFG PL+ + + LS
Sbjct: 397 NNSYYGLMLFGHPLLVSVPRDRLS 420
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ + Y + V H G+ +KK + L C++ F T E L ++
Sbjct: 550 IAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKA---PVRLQECIELFTTVETLEKENP 606
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
W+CP CK+H+ ATKKLDLWMLP+ L+ HLKRFSY+++ + KLDT V FPI +LD S+++
Sbjct: 607 WFCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVI 666
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGGL GHYT +A
Sbjct: 667 KPQNESAPELYKYDLIAVSNHYGGLRDGHYTTFA 700
>gi|297272741|ref|XP_002808172.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 32-like [Macaca mulatta]
Length = 1535
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 294/622 (47%), Gaps = 126/622 (20%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD------EPSI--- 68
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV D EPS
Sbjct: 338 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYVKYDTNPVVIEPSSVLN 397
Query: 69 -----------------------------------DNIS--FDSPHMNGVSSKRAERPGP 91
DNIS F++ G + PG
Sbjct: 398 GGKYSFGTAVHPMEQVEDKIGSSLSYVNTTEEKFSDNISTAFEASETAGSGFLYSATPGA 457
Query: 92 IDNSDIIQNGNGSS---EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMI 148
N +S EG L+ L G+DY +VP+ VW L+ WY ALPR +I
Sbjct: 458 DVCFARQHNTXATSLTLEGGRLKQTPQLIHGRDYEMVPEPVWRALYHWYGANLALPRPVI 517
Query: 149 SEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR-------------------------LSKK 183
+ +E+F L + + ++T S+
Sbjct: 518 KNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAYTGCFSRM 577
Query: 184 ASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
+ ++++E + + I++E R+W Y N + + LD D L+ L++Q
Sbjct: 578 QTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE----------YLKIQD 626
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
+ + ++ D++ P E S F+
Sbjct: 627 EQHLVIEVRNKDMSW-PEEMS---------------------------------FIANSS 652
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPL 362
D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+
Sbjct: 653 KIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPI 709
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGL
Sbjct: 710 GMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGL 769
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S + C C
Sbjct: 770 HEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCG 829
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
+S+ FDPF +L+LPLP + +TV +G+ P+ + + L L LS
Sbjct: 830 HISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLSDL 888
Query: 543 CCLKIDEGLLLAEVYNHQIFRF 564
C L E +LLAEV+ I F
Sbjct: 889 CGLN-SEQILLAEVHGSNIKNF 909
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 618 LFGAPLVT----YLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHG----GKENGFLPEV 669
LFG PL+ + ++ L A + I VS+L SPL +S A G + F V
Sbjct: 1032 LFGMPLIVPCTVHTRKKDLYDA-VWIQVSRLASPLPPQEASNHAQDXFGYGYQWSFTGRV 1090
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK-PIQKDSILKPGKHIKVLLD 728
+ + NS C R F+ CK +D +I V D
Sbjct: 1091 MQKDENS-------------CVRCPLFRF------CRGCKIDCGEDRAFIGNAYIAV--D 1129
Query: 729 WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQ 788
W L + + + H++ ++ + E I+L SCL AF +EE LG ++M+YC +
Sbjct: 1130 WDPTALHLRYQTSQERVVDEHESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSK 1189
Query: 789 CKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1190 CKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1247
>gi|47169480|tpe|CAE48377.1| TPA: ubiquitin specific protease 11 [Rattus norvegicus]
Length = 700
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 204/326 (62%), Gaps = 14/326 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQ-CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G+ GL NLGNTCFMNSALQ CL + P L +YFL + Y +E+N NPLGM GELA A+ DL
Sbjct: 33 GICGLTNLGNTCFMNSALQQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYADL 92
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y+
Sbjct: 93 VKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYV 152
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL+
Sbjct: 153 ELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLS 212
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
+PLP R + V + P V + K G DL +ALST + D+ +++A+
Sbjct: 213 VPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVAD 271
Query: 556 VYNHQIFRFF--ENPAELISSIKDDEHIVAY----RFDRKQGGKIKLEIVNRWQEKSASD 609
V++H+ ++ + E+P +S I D + I Y R + +G + + + +E++ S
Sbjct: 272 VFSHRFYKLYQLEDP---LSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPVYLRERTPSR 328
Query: 610 YLKGSERK--LFGAPLVTYLEEEHLS 633
S LFG PL+ + + S
Sbjct: 329 DYNNSYYGLILFGHPLLVSVPRDRFS 354
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 94/154 (61%), Gaps = 8/154 (5%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW ++ Y + V H G+ +KK + L C+ F T E L ++
Sbjct: 481 IAMDWEPEMKRRYYDEVEAEGYVKHDCVGYMLKKN---PVQLKECIKLFTTVETLEKENP 537
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
WYC CK+H+ ATKKLDLWMLP+VL+ HLKRFS+S++ + KLDT V FPI +LD S+++
Sbjct: 538 WYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFVI 597
Query: 844 SKDGES----YVYDLFAISNHYGGLGGGHYTAYA 873
ES Y YDL A+SNHYGG+ GH T +A
Sbjct: 598 KPKNESAPDLYKYDLIAVSNHYGGMRDGHCTTFA 631
>gi|302687378|ref|XP_003033369.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
gi|300107063|gb|EFI98466.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
Length = 1137
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 293/566 (51%), Gaps = 81/566 (14%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII- 98
+ G+ Y+LI WY+ W R V G+ ++ GP++ D+
Sbjct: 5 MAAGDEYYLIDASWYQRWRRAVTGE---------------------VDKAGPVEEKDLAP 43
Query: 99 ---QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALP--RKMISEGIV 153
Q+ S+ G ++R L E +D + + + WY A P R++I G
Sbjct: 44 VSAQSLVDSATG---KLRPGLVEHEDVEYLTPAAYAQFVQWYGQPDATPPTRRVILRGER 100
Query: 154 NEKRVEVFXLC--------LKLIDSRD------NSQTVIRLSKKASTRQLYE-------- 191
E +E++ L+ +++R +S T +R ++A+ R++ +
Sbjct: 101 GETSLELYPPSITVSSMSKLRSVNARPPHELSVSSTTTLRDLREAALRRVSQADPTTTTY 160
Query: 192 KVCKLRGIEQEKARIWDYFNKQRST---SPLDVSDQTLDDAMLQMDQDILLEVQVDNGIS 248
+V +L + K ++ S+ ++ SD+T+++ L+ D +++E+Q
Sbjct: 161 RVWRLDSVPAGKKVCVEFSAHDVSSYDGKLVEASDRTVEEEGLE-DAKLVVELQ------ 213
Query: 249 MDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSY 308
D LVP E + S + G G Y SS + +
Sbjct: 214 ----EYDSWLVPEEKNESEGMFSQG-----GFFDRYSAQSSSSSSLMKPKTTLGPFTRAS 264
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGE 367
++K + G GL NLGNTCFMNSALQCL H +L +YFL G + E+N +NPLGMHG
Sbjct: 265 TSSKPAREPGTTGLTNLGNTCFMNSALQCLAHQEELTEYFLSGVFKQELNPDNPLGMHGA 324
Query: 368 LALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
+A AFGDLL+ +W+ S ++ +PR FK +L RFAPQFSGY QHDSQEL+AFLLDGLHEDL
Sbjct: 325 IAEAFGDLLQHIWARSSASSYSPRDFKMQLQRFAPQFSGYQQHDSQELVAFLLDGLHEDL 384
Query: 427 NRVKQKPYIEMKDSGGRPDEEVAN---ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
NRV +KPY+E D G D E+A + W + RNDS+IVD+FQGQY+STLVCP C K
Sbjct: 385 NRVLKKPYVEKPDWEGGGDLELAQLAKKSWDGYMLRNDSVIVDLFQGQYQSTLVCPECQK 444
Query: 484 VSITFDPFMYLTLPLP--STVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
VSITFDPFMYLTLPLP S T+ + ++ L +P ++ + +D+ +
Sbjct: 445 VSITFDPFMYLTLPLPIQSKWKHTIIYVPYDSDKPHLRVPMEIS--SNSSFRDVRTIIGR 502
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFEN 567
+ D LL E++NH+ ++ ++
Sbjct: 503 WMDVPPD-NLLTMELFNHKFYKSLDD 527
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 20/131 (15%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+L CLD F EE LG DD+WYCPQCK+H+QATK+ DLW PD+LV HLKRFS SR L+
Sbjct: 783 ITLQDCLDEFTKEEQLGEDDLWYCPQCKKHQQATKRFDLWKTPDILVVHLKRFSNSRALR 842
Query: 823 NKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYDLFAISNHYG 862
+K+D FV+FPI LDL+ + E +YDLFA+ H G
Sbjct: 843 DKIDAFVDFPIEGLDLAGMAGERKVANRLKEEGVDASELNLGNAEEPLLYDLFAVDEHMG 902
Query: 863 GLGGGHYTAYA 873
GLGGGHY AYA
Sbjct: 903 GLGGGHYRAYA 913
>gi|390596584|gb|EIN05985.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1280
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 218/626 (34%), Positives = 309/626 (49%), Gaps = 102/626 (16%)
Query: 13 NGGSCLPCTPDEERQIVQD-----LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPS 67
+GG P P E + ++ ++ G+ ++++S WYR W + G+
Sbjct: 74 SGGPPDPTQPATEPHLAASEKFSIVEQARKSPMEVGSTWYIVSWPWYRRWMKACTGE--- 130
Query: 68 IDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQ 127
+ D P V+ GP+DNS ++ E+ + EG D VP
Sbjct: 131 ---VDKDGP----VAESDI---GPVDNSHLVNQAG--------ELISSTVEGVDVTYVPS 172
Query: 128 QVWEKLFCWY-KGGPALPRKMISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVI 178
W +L WY + LPRK+I+ GI E +E+ ++ + ++D + T +
Sbjct: 173 DSWAQLVRWYGEATHPLPRKVIARGIAQEPSLELHPPRIRAMRLVAADDAATQDLADTPL 232
Query: 179 RLSKKASTRQLYE-------KVCKLRGIEQEKARIW-------DYFNKQRSTSPL----- 219
R +ST L + +R+W D S S L
Sbjct: 233 RYITLSSTDTLEDLLNAAIHAFSPPPSSSPPASRLWSVPAPRTDPVEGGYSASRLLQVGG 292
Query: 220 ---DVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP-IEPSRSSL-TIA-GG 273
S ++LD+A++Q D +LE+Q +NG + D ALVP IEP + T+A
Sbjct: 293 LQIQPSRKSLDEALVQSDDLFILELQ-ENGRWL----VDEALVPTIEPGTAETETVALEQ 347
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS-------------YNTAKKGEK---G 317
PA + F + + D+ +S NT+ + K
Sbjct: 348 PAPLFKPEEDF-FTRVAKQAVNKILGDVTQRTNSSAAENVPSKAVVATNTSTRATKLKPP 406
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNSALQCL HT +L +YFL G Y +E+N +NPLGM G +A AFG LL
Sbjct: 407 GTIGLGNLGNTCFMNSALQCLAHTRELVEYFLNGVYEEELNPDNPLGMGGAIAQAFGALL 466
Query: 377 RKLWSSGRAAVA---------PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
++W S A+ + PR FK L RFAPQFSGY QHDSQEL+AFLLDGLHEDLN
Sbjct: 467 ERMWGSPSASSSSSFSSTSISPREFKQALQRFAPQFSGYQQHDSQELVAFLLDGLHEDLN 526
Query: 428 RVKQKPYIEMKD-SGGRPDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
R+ +KPY+E D GG E ++A + W + RNDS+IVD+FQGQY+STLVCP C KV
Sbjct: 527 RILKKPYVEKPDWEGGGELELVQLAKKSWDGYLQRNDSVIVDLFQGQYRSTLVCPECQKV 586
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFY--ANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
SITFDPFMYLTLPLP + + T+FY A+ S + V + K+L L
Sbjct: 587 SITFDPFMYLTLPLP--IKKKWKHTIFYVPADLSKRHVRVPVEIGADASFKELRALLGR- 643
Query: 543 CCLKIDEGLLLA-EVYNHQIFRFFEN 567
++ D LL E ++H+ +R ++
Sbjct: 644 -WMEADPNKLLTLEEFSHRWYRVLDD 668
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 87/135 (64%), Gaps = 20/135 (14%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+++ IS++ CL+ F EE LG DD+WYCPQCK+H+QATKK DLW PD+LV HLKRFS S
Sbjct: 947 KKKDISIYDCLNEFTKEEQLGEDDLWYCPQCKKHQQATKKFDLWNAPDILVVHLKRFSNS 1006
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYDLFAIS 858
R L++K+D FV+FP+ L L ++ ++ E +YDL+A+
Sbjct: 1007 RMLRDKIDAFVDFPVNGLSLEGMVQEREVAKHLQAQGVDVASVGLAELDEPLLYDLYAVD 1066
Query: 859 NHYGGLGGGHYTAYA 873
H GGLGGGHY AYA
Sbjct: 1067 EHIGGLGGGHYRAYA 1081
>gi|242013591|ref|XP_002427486.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212511881|gb|EEB14748.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 1585
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 296/643 (46%), Gaps = 151/643 (23%)
Query: 19 PCTPDEERQIVQDL--KNQSDLDLKEGNLYFLISTRWYRSWERYVCGD----EPSIDN-- 70
P P EE +IV + Q L+ G ++LI W++ W+ Y+ + P I+
Sbjct: 358 PSNPVEEGEIVMQWLKREQEKRGLEVGQFWYLIDMTWWKQWQMYIQHEGGPGPPDINCEI 417
Query: 71 -------------------------------------ISFDSPHMNGVSSK-----RAER 88
+ F H + K + R
Sbjct: 418 NGYPKNMNSSIKINTRETMFALHTSSFTTSGNNNNFFVDFSPNHSPKLEQKQIVNIKFPR 477
Query: 89 PGPIDNSDIIQNGN---GSSEGDDLEVRRNL---EEGQDYVLVPQQVWEKLFCWYKGGPA 142
PGPI+NS++IQ+ S G+ ++R+NL + D+ LV Q +W L WY G P+
Sbjct: 478 PGPINNSNLIQSPAYKVPSLTGEGGKLRKNLCLNQNNGDFQLVSQSLWTALTLWYGGEPS 537
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLID--SRDNSQTVIR--------------------- 179
LPR++I + +E++ + ++ + +++N Q +
Sbjct: 538 LPRQVIMPTNSAQPDLELYPINIRFLKHATQNNRQQINNWSGMVGGYGASAIGNAGYAYV 597
Query: 180 ----------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSD 223
SK A+ +Q+Y+ +C I E R+W Y + + L+ D
Sbjct: 598 TNLTATSRRYLAYVGAFSKMATLKQVYQYLCNKLRIRFEDMRLWLY-RDESNMFILEEED 656
Query: 224 QTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTG 283
TLD+ + + IL+E++ DL P E S +IA
Sbjct: 657 STLDELGILDEDQILIEIR----------NKDLTW-PEELS----SIAS----------- 690
Query: 284 YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE----KGGLAGLQNLGNTCFMNSALQCLV 339
++ N ++GE + G GL NLGNTCFMN+ALQC+
Sbjct: 691 ----------------------NTSNDKRQGELSALEKGATGLNNLGNTCFMNAALQCVS 728
Query: 340 HTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR 398
+T L QYF + E+N NPLGM G +AL + DL+ +WS +AP + + +
Sbjct: 729 NTQVLTQYFTSKMHLYELNRNNPLGMKGHIALRYADLIDNIWSGSNRTIAPLKLRWTIGK 788
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKA 458
+AP+F+G+ QHDSQELLAFLLDGLHEDLNRV KPY+E+KDS GRPD VA E W+NH
Sbjct: 789 YAPRFNGFQQHDSQELLAFLLDGLHEDLNRVHDKPYVELKDSDGRPDVIVAQEAWENHIL 848
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
RN S+IVD+F GQ KS + C +CS S+ FDPF YL+LPLP +VTV +GS +
Sbjct: 849 RNKSIIVDLFHGQLKSKVTCNMCSHESVRFDPFNYLSLPLPMESYLHFSVTVIKLDGS-V 907
Query: 519 PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
P+ + V + L LS C + + LAEV N I
Sbjct: 908 PVKYGVRINNDEKYGALKTELSNLCGIP-SHLIKLAEVQNALI 949
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%)
Query: 727 LDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
+DW L + ++ + + H++ + E ISL CL+AF EE L D+ YC
Sbjct: 1280 IDWDPTALHLRYQTCLEKIVIEHESVARTRHQMSEPISLNHCLEAFTREETLSEDEKVYC 1339
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+CK H ATKKL +W LP +L+ HLKRF Y K V FP+ D + Y+ S
Sbjct: 1340 SKCKSHEIATKKLQIWRLPPILIVHLKRFQYVNEKWIKSQKVVEFPVKGFDPTMYLASVP 1399
Query: 847 GES 849
E+
Sbjct: 1400 KET 1402
>gi|156365847|ref|XP_001626854.1| predicted protein [Nematostella vectensis]
gi|156213745|gb|EDO34754.1| predicted protein [Nematostella vectensis]
Length = 632
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 294/608 (48%), Gaps = 85/608 (13%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTEN----PLGMHGELALAFG 373
L GL+N GNTCF+N+ +QCL HT LA+YF +G Y ++ G GE+
Sbjct: 1 LTGLKNHGNTCFINAIIQCLAHTDLLAEYFVMGGYKQDLKLRKGQIKKFGTKGEVTEKLA 60
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
LL+ LW S + FK + + Q+ GY+QHD+QE L +LLD +HEDLNR ++
Sbjct: 61 VLLKSLWYSEYSGEVSSEFKSVVGKHGAQYRGYSQHDAQEFLLWLLDIVHEDLNRATKRK 120
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
Y KD+ GR DE +A E NH NDS ++D+FQ QY+S L CP C + S TFDPF+
Sbjct: 121 YKANKDNLGRSDECIATEALNNHLRCNDSFVLDLFQAQYRSALSCPKCKQKSTTFDPFLC 180
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC---CLKIDEG 550
L+LP+P R + VT+ + S P+ V++ G DL A+S C +
Sbjct: 181 LSLPIPQRSLRPLLVTIVFVGASRAPLRIGVSVPISGSISDLCAAISEMTDIPCSSLIIT 240
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDY 610
L ++ +N RF+ N + +S I D + I + ++ G E V S S Y
Sbjct: 241 ELSSDGFNR---RFYAN--QPLSIIHDSDAIYGFEAPQRLGIHTFTETV-----ISPSLY 290
Query: 611 LKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVI 670
FG P V ++ +E ++ SKL + + + L +
Sbjct: 291 RCCCR---FGQPFVVHVLQE--------LSFSKLQALFLH----------EMDRMLLDNA 329
Query: 671 DELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSIL----KPGK----H 722
D H + + L R S+ S D + + ++ ++L PG H
Sbjct: 330 DFQIKKHRQLFRLRVMNGLAGR--SYLSSELDHPLYTATVERRVALLTHSDAPGSTGPAH 387
Query: 723 IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKK--TRQEAISLFSCLDAFLTEEPLGP 780
I+++L+W ++ ++D P H + V+ + A++L +C + + +E LG
Sbjct: 388 IRMVLEWESELRNSCIKPDVQDSPEEHTSVQNVQNLFSNTHAVNLDNCFELYTKDETLGL 447
Query: 781 DDMWYCPQCKEHRQAT-KKLDLWMLPDVLVFHLKRFSYSRYL-------KNKLDTFVNFP 832
DD W CP+CK+ +Q T KKL LW LP+VL+ HLKRF +L + KL T V FP
Sbjct: 448 DDAWLCPRCKKLQQGTVKKLSLWSLPEVLIIHLKRFRQLLFLQLQCPSGRTKLHTLVEFP 507
Query: 833 ILNLDLSKYMKSKD--------------------------GESYVYDLFAISNHYGGLGG 866
+ +LD+S +++ + GE +YDL+A+ NH G + G
Sbjct: 508 VNDLDMSPHLEPRHKIIPDTHSVLTNWPHWRRTRRSSGVAGEDNLYDLYAVCNHLGNMSG 567
Query: 867 GHYTAYAK 874
GHYTA+ +
Sbjct: 568 GHYTAHCR 575
>gi|326931555|ref|XP_003211894.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Meleagris
gallopavo]
Length = 1561
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 267/527 (50%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + N + ++PG IDN ++ + + + EG L+ L EG+DYV
Sbjct: 451 NNQCFLGTNGNTLLQLNPQKPGAIDNQPLVTQEPVKAASLTMEGGRLKRSPQLVEGRDYV 510
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---- 179
+VP+ VW L+ WY +LPR +I N +E+F L + + ++T
Sbjct: 511 MVPEPVWRALYHWYGANLSLPRPVIKNSKTNVPELELFPRYLLFLRQQPATRTQQSNIWV 570
Query: 180 ---------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ + ++++E + + I++E R+W Y N + +
Sbjct: 571 NMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTL 629
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D L+ L++Q + + ++ D++ P E S
Sbjct: 630 LDDEDHRLE----------YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------- 664
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
F+ D + K + G GL NLGNTCFMNS++QC+
Sbjct: 665 -------------------FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCV 702
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L +YF+ G + E+N NP+GM G +A +GDL+++LWS + +AP + +A
Sbjct: 703 SNTQPLTRYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNIAPLKLRWTIA 762
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV KPY+E+KDS GRPD EVA E W+NH
Sbjct: 763 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHDKPYVELKDSDGRPDWEVAAEAWENHL 822
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ KS + C C +S+ FDPF +L+LPLP + +TV +G+
Sbjct: 823 RRNRSIVVDLFHGQLKSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT- 881
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV++ I F
Sbjct: 882 TPVRYGLRLNMDEKYTGLKKQLSELCGLK-PEQILLAEVHSSNIKNF 927
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF +EE LG D+M+
Sbjct: 1145 IAVDWDPTALHLRYQTSQERIVEEHESVEQSRRAQAEPINLDSCLRAFTSEEELGEDEMY 1204
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP N D S ++
Sbjct: 1205 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRENFDPSAFL 1262
Query: 843 KSKD 846
+D
Sbjct: 1263 VQRD 1266
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +FLI+ W+ W+ YV
Sbjct: 318 PATPEEEGQIIRGWLERESRYGLQPGHNWFLIAMPWWHQWKEYV 361
>gi|440794108|gb|ELR15279.1| hypothetical protein ACA1_220180 [Acanthamoeba castellanii str.
Neff]
Length = 1296
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 210/700 (30%), Positives = 343/700 (49%), Gaps = 70/700 (10%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE---- 65
M NG P P ++R ++ + LK ++Y++IST+W + W+ YV DE
Sbjct: 3 MNGNGPRKRP-PPAQQRDTIKPWLDGKQPTLKIADVYYVISTKWLKQWKAYVSFDEETTT 61
Query: 66 PSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLV 125
P+ + G + + P IDNS ++++ S+G++ ++ EG D++L+
Sbjct: 62 PAAADEGGGDGAAEGTGEQPRKPPNSIDNSVLLKDPGFKSKGNEPVIKTKAIEGVDFILI 121
Query: 126 PQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQT------VI 178
PQ+ W L+ WY GGP L R++I +G +VEVF L L ++ Q +
Sbjct: 122 PQKPWAYLYKWYGGGPELAREVIGDGKEGRALKVEVFPLALTFKNTNTEGQINPFSAIEV 181
Query: 179 RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDIL 238
+SKKA+ L VC+ ++ R+W+Y + + + + TL++A L Q +L
Sbjct: 182 VVSKKATVGYLKSLVCRKMELDSAHTRVWNYV--KNTGKLIKEENVTLEEAKLVDGQSLL 239
Query: 239 LEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF 298
+EV++D+G S G I+ +SS ++ L++G ++ +Y S
Sbjct: 240 IEVRLDDG-SWPRDG-------IKKRKSSGSVKD--KLADGIADEHQPRKYQSGSHRPVG 289
Query: 299 MDMDDGYDSYNT--------AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
G S A+ G G+ GL NLGNTCF+NSA+QCL +T L ++FL
Sbjct: 290 SGGGSGGSSGGYGGSSGDVKARPGTSKGVCGLVNLGNTCFLNSAIQCLSNTVALTEFFLS 349
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y +IN NPLGM G+LA + ++ +L GR P+ L R QF+G++QH
Sbjct: 350 DAYKADINKSNPLGMKGQLAECYAGVVGRLL--GRGTAQPQT----LHR---QFNGFSQH 400
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
D+QE LAFLLDGLHEDLNRV KPY+E+K+S GR DEEV+ E W+ H RN S+IVD+FQ
Sbjct: 401 DAQEFLAFLLDGLHEDLNRVLNKPYVEIKESDGRADEEVSREAWECHLKRNRSVIVDLFQ 460
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
+ K PFMY++LP+P R + + + P+ +++ K
Sbjct: 461 AE---------VWKGEHHVRPFMYISLPMPPESDRLIDIILIPNEPHRKPVMYSIKCAKS 511
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYR---- 585
+ L L L + + + ++ +H I F + A +++ + + A+
Sbjct: 512 ARVQILKEKLEEYSGLSRRK-ISMVDIEDHYIHGFIPD-ARSVATFRTNATAFAFETVGP 569
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
D KQ ++++I++R ++ R+ FG P V YL + + + V L
Sbjct: 570 VDPKQA--LRVQILHRRRK---------IPRQAFGMPFVMYLSTKRTTARQLYTMVWHRL 618
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
S + + H G E+G + D + S ++ T E
Sbjct: 619 SRFAES-NGVGGHTG-EDGPHAALKDTAAKSDDDKPSTPE 656
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ T KK + + L C F E LG +D WYCP+CK+ RQA KK +LW +P L
Sbjct: 886 HESVVTNKKQAKRRLCLDDCFRLFCMNEQLGENDQWYCPKCKDFRQARKKFELWQMPQTL 945
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGH 868
V HLKRF Y+R+ ++K+ TF +FP+ LDLS+Y+++ +S +YDL+A++NH GGLGGGH
Sbjct: 946 VIHLKRFQYTRFSRDKIITFCDFPLTGLDLSEYVQNCT-QSPIYDLYAVANHQGGLGGGH 1004
Query: 869 YTAYA 873
YTA+
Sbjct: 1005 YTAFG 1009
>gi|145528155|ref|XP_001449877.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417466|emb|CAK82480.1| unnamed protein product [Paramecium tetraurelia]
Length = 877
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 214/789 (27%), Positives = 348/789 (44%), Gaps = 97/789 (12%)
Query: 112 VRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALP-------RKMISEGIVNEKRVEVFXLC 164
++ NL+E DY++V +++W+ +Y G P + K ++ ++ K V ++ +
Sbjct: 109 MKENLQENVDYIIVDKEIWQFFTTYYHGTPIVRLSNGSGIEKTVAVNLLKFKTVLLYPVV 168
Query: 165 LKLID-----SRDNSQTVIRLSKKASTRQLY----EKVCKLRG--IEQEKARIWDYFNKQ 213
+K I + Q +++ + + Y + V G + RIW + + Q
Sbjct: 169 IKQIAFDRFYKQTFDQEYLQVDRNMKLKDYYSLLSKTVTTFTGNFAKDNNVRIWRFQSDQ 228
Query: 214 RSTSPLDVSD--------QTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSR 265
+ +D +T D+ + D + D + N L ++ +
Sbjct: 229 KDIFKAFFADVQKQVGVLETNDEMSFDFNGDYIHYSIYDTIEDVGILDNHLIIIEFKDEV 288
Query: 266 SSLTIAGGPALSNGHTTG---YRFNQYPGSSFGSTFMDMDDGYDSYNT-AKKGEK----- 316
I G + +P ++ D Y YN + + EK
Sbjct: 289 KPWCIRNKAVQVEGKCENCQIVKILNHPCVCRKVSYCSQDCKYKDYNYHSMRCEKFGSDD 348
Query: 317 -------------GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
GLAGL NLGNTCFMNS QC+ +T L +YFL + Y DEIN +NP+
Sbjct: 349 DTIRGLSQQPNSIAGLAGLSNLGNTCFMNSGTQCISNTVPLTEYFLSNQYFDEINMDNPI 408
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
G G+L G LL+KLW + V P +K + +F P F GY+QHDS EL+ F+LDG+
Sbjct: 409 GTKGQLVKRVGALLKKLWYGEKQVVTPTNYKKAVGQFQPMFKGYHQHDSSELITFVLDGI 468
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRVK+KPY+E KDS R D VA E W NH ARN S+IVD+ GQYKSTL CP C
Sbjct: 469 HEDLNRVKKKPYVETKDSDERTDFVVAKESWSNHLARNQSIIVDLMYGQYKSTLKCPRCE 528
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYA--NGSGLPMPFTVTLMKHGCCKDLILALS 540
++SITFDP++ + L +PS RT++ FY+ N + +PF K+ K+ LS
Sbjct: 529 RLSITFDPYLMVQLGIPSQKKRTISFKYFYSFFNSTSKIIPFDKN--KNISLKEYYQVLS 586
Query: 541 TACCLKIDEGLLLAEVYN-HQIFRFFENPAELISSIKD-DEHIVAYRF----DRKQGGKI 594
LK LL + N + F + +I K + +R + + K
Sbjct: 587 EE--LKTKPQNLLGYIANQYTSFELLKESKSIIEIRKSAKRQQLCFRALTDEEAQTQNKF 644
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSS 654
++ N++Q+ Y + ++ E + + + + + L PL Y +
Sbjct: 645 PVQFSNKYQDYQKMSYFQSG----------FFIFEGSTTRKQMHLKIFQYLQPLFAEYQN 694
Query: 655 AKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD 714
N + SN N + ++ E+ F + +E S K
Sbjct: 695 LDYEKNVFNKYYSLFYKSNSNYWN-PCSYCQSKNCNDCEVKFDDEVLEETKS------KV 747
Query: 715 SILKPGKHIKVLLDWTDD------VHELYDPSYIKDLPVV----------HKTGFTVKKT 758
+ + +V++ W + + E+++ + ++L + +T T
Sbjct: 748 TASDTQCNFEVIILWKESPFKSVKISEIFN--HYRNLNKIESNFLSKCNSRRTRIIKNST 805
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+ ++L CL E L ++ WYC C+EH QA K + ++ P +L+F LKRF S
Sbjct: 806 PEPCVTLADCLQFSQQPEQLNSENTWYCKVCQEHVQAFKSMQIYKAPQILIFTLKRFKAS 865
Query: 819 -RYLKNKLD 826
R K KL+
Sbjct: 866 NRMFKQKLE 874
>gi|449479877|ref|XP_002196656.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Taeniopygia
guttata]
Length = 1557
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 267/527 (50%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + N + ++PG IDN ++ + + + EG L+ L EG+DYV
Sbjct: 460 NNQCFLGSNGNTLLQLNPQKPGAIDNQPLVTQEPVKAASLTMEGGRLKRSPQLVEGKDYV 519
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---- 179
+VP+ VW L+ WY +LPR +I N +E+F L + + ++T
Sbjct: 520 MVPEPVWRALYHWYGANLSLPRPVIKNSKTNVPELELFPRYLLFLRQQPATRTQQSNVWV 579
Query: 180 ---------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ + ++++E + + I++E R+W Y N + +
Sbjct: 580 NMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTL 638
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D L+ L++Q + + ++ D++ P E S
Sbjct: 639 LDDEDHRLE----------YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------- 673
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
F+ D + EKG GL NLGNTCFMNS++QC+
Sbjct: 674 -------------------FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCV 711
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L +YF+ G + E+N NP+GM G +A +GDL+++LWS + +AP + +A
Sbjct: 712 SNTQPLTRYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNIAPLKLRWTIA 771
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV KPY+E+KDS GRPD EVA E W+NH
Sbjct: 772 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHDKPYVELKDSDGRPDWEVAAEAWENHL 831
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ KS + C C +S+ FDPF +L+LPLP + +TV +G+
Sbjct: 832 RRNRSIVVDLFHGQLKSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT- 890
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV++ I F
Sbjct: 891 TPVRYGLRLNMDEKYTGLKKQLSELCGLK-PEQILLAEVHSSNIKNF 936
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF +EE LG D+M+
Sbjct: 1154 IAVDWDPTALHLRYQTSQERIVEEHESVEQSRRAQAEPINLDSCLRAFTSEEELGEDEMY 1213
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP N D S ++
Sbjct: 1214 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRENFDPSAFL 1271
Query: 843 KSKD 846
+D
Sbjct: 1272 VQRD 1275
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +FLI+ W+ W+ YV
Sbjct: 327 PATPEEEGQIIRGWLERESRYGLQPGHNWFLIAMPWWHQWKEYV 370
>gi|118100328|ref|XP_415892.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Gallus gallus]
Length = 1660
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 269/527 (51%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + N + ++PG IDN ++ + + + EG L+ L EG+DYV
Sbjct: 550 NNQCFLGTNGNTLLQLNPQKPGAIDNQPLVTQEPVKAASLTMEGGRLKRSPQLVEGRDYV 609
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---- 179
+VP+ VW L+ WY +LPR +I N +E+F L + + ++T
Sbjct: 610 MVPEPVWRALYHWYGANLSLPRPVIKNSKTNVPELELFPRYLLFLRQQPATRTQQSNIWV 669
Query: 180 ---------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ + ++++E + + I++E R+W Y N + +
Sbjct: 670 NMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTL 728
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D L+ +Q +Q ++ ++V N D++ P E S
Sbjct: 729 LDDEDHRLEYLKIQDEQHLV--IEVRN--------KDMSW-PEEMS-------------- 763
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
F+ D + K + G GL NLGNTCFMNS++QC+
Sbjct: 764 -------------------FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCV 801
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L +YF+ G + E+N NP+GM G +A +GDL+++LWS + +AP + +A
Sbjct: 802 SNTQPLTRYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNIAPLKLRWTIA 861
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV KPY+E+KDS GRPD EVA E W+NH
Sbjct: 862 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHDKPYVELKDSDGRPDWEVAAEAWENHL 921
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ KS + C C +S+ FDPF +L+LPLP + +TV +G+
Sbjct: 922 RRNRSIVVDLFHGQLKSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT- 980
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV++ I F
Sbjct: 981 TPVRYGLRLNMDEKYTGLKKQLSELCGLK-PEQILLAEVHSSNIKNF 1026
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF +EE LG D+M+
Sbjct: 1244 IAVDWDPTALHLRYQTSQERIVEEHESVEQSRRAQAEPINLDSCLRAFTSEEELGEDEMY 1303
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP N D S ++
Sbjct: 1304 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRENFDPSAFL 1361
Query: 843 KSKD 846
+D
Sbjct: 1362 VQRD 1365
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +FLI+ W+ W+ YV
Sbjct: 417 PATPEEEGQIIRGWLERESRYGLQPGHNWFLIAMPWWHQWKEYV 460
>gi|405967141|gb|EKC32341.1| Ubiquitin carboxyl-terminal hydrolase 32 [Crassostrea gigas]
Length = 1526
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 250/484 (51%), Gaps = 94/484 (19%)
Query: 88 RPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
+PGPIDNS++I N ++EG L L G+D+ LVP+ +W L WY G A
Sbjct: 536 KPGPIDNSNLITPNNSKVVSLTAEGGRLRRDTMLVRGKDFELVPEVIWRALSTWYGGNIA 595
Query: 143 LPRKMISEGIVN-EKRVEVFXLCLKLIDSRDNSQT------------------------- 176
LPR +IS N +E++ + +KL+ + +Q
Sbjct: 596 LPRTVISSKNNNGNPELELYPITVKLLRHQIVAQRPAPTSFTGVMSGIGGMALSMTNYVS 655
Query: 177 ------------VIRLSKKASTRQLYEKVC-KLRGIEQEKARIWDYFNKQRSTSPLDVSD 223
SK+ + +Q+YE +C K+R I +E R+W NK + L+
Sbjct: 656 SAPPIPRRYVAFTATFSKQHTIQQIYEFLCTKVRFI-REDIRLWKIGNKDDIMTLLEDES 714
Query: 224 QTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTG 283
T++D +++ +Q IL+EV+ DL P E S+ L+ T
Sbjct: 715 MTVEDCVIEENQSILIEVR----------NKDLTW-PEEISQ----------LAKNKTC- 752
Query: 284 YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPD 343
R Q P + G GL NLGNTCFMN+A+QC+ +T
Sbjct: 753 -RKEQVP------------------------TQKGATGLNNLGNTCFMNAAVQCVSNTWP 787
Query: 344 LAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQ 402
L QYF+G + E+N NPLGM G +A +G+L++ LWS +AP + + ++AP+
Sbjct: 788 LTQYFIGGLHLFELNRSNPLGMKGHIAQRYGELVKDLWSGTSKTIAPLKLRWTIGKYAPR 847
Query: 403 FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDS 462
F+G+ QHDSQELL+FLLDGLHEDLNRV KPY+E+KDS GR DE VA E W+NH RN S
Sbjct: 848 FNGFQQHDSQELLSFLLDGLHEDLNRVHVKPYVELKDSDGREDEIVAEEAWENHLRRNQS 907
Query: 463 LIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPF 522
+IVD+F GQ KS + C C +S+ FDPF YL+LPLP + V V +GS +P+ +
Sbjct: 908 IIVDLFHGQLKSQVRCKECGLLSVRFDPFNYLSLPLPMDSCIHLEVIVTRLDGS-VPIKY 966
Query: 523 TVTL 526
+ L
Sbjct: 967 GIRL 970
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/197 (64%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
GLAGL NLGNTCFMNS++QCL H L + FL G Y ++N +NPLG GELA AFG L+
Sbjct: 1 GLAGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLM 60
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LW G +V+P+ FK LARFAPQF GY+Q DSQELLAFLLDGLHEDLNRV+QKPY+E
Sbjct: 61 KLLWQGGVGSVSPKGFKAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQKPYVE 120
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D+ GRPD+ VA E W N++ RNDS++VD FQG YKSTLVCP CS S+ FDPFMYL+L
Sbjct: 121 EADAEGRPDKVVAAEAWDNYRKRNDSVVVDHFQGLYKSTLVCPQCSFSSVKFDPFMYLSL 180
Query: 497 PLPSTVTRTMTVTVFYA 513
PLPS+ TRT+ +T+ YA
Sbjct: 181 PLPSSKTRTLYITLIYA 197
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 94/140 (67%), Gaps = 9/140 (6%)
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
+DP LP+ KTR I+L + AFL E L D WYC +CKEH +A
Sbjct: 172 FDPFMYLSLPL------PSSKTRTLYITL---IYAFLQPEQLDAADSWYCGRCKEHVRAE 222
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
KKLDLW LP++LV HLKRFSYSR+ ++KLD V+FP+ LDLS ++ + + VYDL+A
Sbjct: 223 KKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPVHFPLSALDLSSFLLREQDVAPVYDLYA 282
Query: 857 ISNHYGGLGGGHYTAYAKVN 876
+SNH+GGLGGGHYTAY +++
Sbjct: 283 VSNHFGGLGGGHYTAYCRMD 302
>gi|326674232|ref|XP_686236.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Danio
rerio]
Length = 1572
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 268/527 (50%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F S + + +S +RPG IDN ++ + + EG L+ L G+++
Sbjct: 488 NNQCFSSANGHLPNSLAVQRPGAIDNQPLVTTEPMKAPTLTMEGGRLKKSHQLLSGREFE 547
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---- 179
VP+ VW L+ WY +LPR +I + + +E+F L L + + +++
Sbjct: 548 TVPEPVWRALYHWYGANLSLPRPVIKSTVKAQPELELFPLYLLFLRQQPATRSPQSNIWV 607
Query: 180 ---------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ + + ++E + + I++E R+W Y N + +
Sbjct: 608 NMGNVPSPNAPLKRVLAYTGCFSRMCTIKDIHEYLSQRLRIKEEDMRLWLY-NSENYLTL 666
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D TL+ + +Q ++ ++V N D++ P E S
Sbjct: 667 LDDEDHTLESLKIPDEQHLV--IEVRN--------KDMSW-PEEMS-------------- 701
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
F+ D + K + G GL NLGNTCFMNS++QC+
Sbjct: 702 -------------------FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCV 739
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L +YF+ G + E+N NP+GM G +A +GDL+++LWS + VAP + +A
Sbjct: 740 SNTKPLTEYFISGRHLYELNRTNPIGMRGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIA 799
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W+NH
Sbjct: 800 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDHEVATEAWENHL 859
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ +S + C C +S FDPF +L+LPLP + + +TV +GS
Sbjct: 860 RRNRSIVVDLFHGQLRSQVKCKTCGHISARFDPFNFLSLPLPMDSSMHLEITVIKLDGS- 918
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV+ I F
Sbjct: 919 TPVRYGLRLNMDEKYMGLKKQLSELCSLK-PEQILLAEVHTSNIKNF 964
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 725 VLLDW-TDDVHELYDPS---YIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGP 780
+ +DW +H Y S +++ P V ++ ++ + E ISL SCL AF +EE LG
Sbjct: 1177 IAVDWDPTALHLRYQTSQERIVEEHPSVEQS----RRAQAEPISLDSCLKAFTSEEELGE 1232
Query: 781 DDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDL 838
D+++YC +CK HR ATKKLDLW LP VL+ HLKRF + R++K++ V FP + D
Sbjct: 1233 DELYYCSKCKTHRLATKKLDLWRLPPVLIVHLKRFQFVNGRWIKSQ--KIVKFPRESFDP 1290
Query: 839 SKYMKSKD 846
S ++ ++
Sbjct: 1291 SAFLAPRE 1298
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P TP+EE QI++ L+ +S L+ +FLIS +W++ W+ YV D S I + P
Sbjct: 355 PATPEEEGQIIRGWLERESRHGLQPSQNWFLISMQWWQQWKDYVRYDNKS---IVMEQPS 411
Query: 78 MNGV---SSKRAERPGPIDN 94
+ G SS+ A PI N
Sbjct: 412 VQGSGMRSSQSAASVEPILN 431
>gi|443699630|gb|ELT99007.1| hypothetical protein CAPTEDRAFT_129894 [Capitella teleta]
Length = 1508
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 242/481 (50%), Gaps = 92/481 (19%)
Query: 75 SPHMNGVSSKRAERPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLVPQQV 129
SP +N S A+RPG IDN +I N ++EG L+ R L G+D+ LVP+ V
Sbjct: 532 SPSLNR-HSNAAQRPGAIDNGPLIAPSNAKVATLTNEGGRLQRDRMLARGRDFELVPEAV 590
Query: 130 WEKLFCWYKGGPALPRKMI--SEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR-------- 179
W+ L WY G LPR +I +G+ E +E++ + +KL QT +
Sbjct: 591 WKALSAWYGGSVPLPRTVIISQQGMAPE--LELYPIVVKLF----RHQTAVNRPPQAATF 644
Query: 180 -----------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRST 216
S+K + RQ+ + + +E R+W F ++S
Sbjct: 645 TGMMGGIGGMPSTPRRYLAYTAAFSRKHTLRQILDFLALRLRFSREDMRLWK-FKDEQSM 703
Query: 217 SPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL 276
+ L+ + TLD + + +LLEV+ DL P E S
Sbjct: 704 TMLEEEESTLDQLGITENMQLLLEVR----------NKDLTW-PEEMS------------ 740
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
F+ + N EKG +GL NLGNTCFMNSA+Q
Sbjct: 741 ---------------------FLAKNKAAIDRNQQAPTEKGA-SGLSNLGNTCFMNSAVQ 778
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
C+ +T L QYF G + E+N N LGM G +A +G+L++ LWS ++AP +
Sbjct: 779 CVSNTRILTQYFTGGMHLYELNRSNTLGMKGHIAQRYGELIKDLWSGTAKSIAPLKLRWT 838
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ ++AP+F+G+ QHD+QE LAFLLDGLHEDLNRV KPY+E+KDS GR DEEVA E W N
Sbjct: 839 IGKYAPRFNGFQQHDAQEFLAFLLDGLHEDLNRVHNKPYVELKDSDGREDEEVAKEAWDN 898
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H RN S+IVD+F GQ KST++C C S+ FDPF +L+LPLP + V V NG
Sbjct: 899 HLLRNRSVIVDLFHGQLKSTVMCQNCGTKSVRFDPFTFLSLPLPMESCIHIEVIVIRLNG 958
Query: 516 S 516
S
Sbjct: 959 S 959
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 725 VLLDWTDD-VHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW +H Y S ++ + H + ++ + + I L +CL AF T E LG D++
Sbjct: 1203 IAIDWEPTALHLRYQQSQERNY-MDHSSVEESRRLQTDPIDLDTCLKAFTTAEELGEDEL 1261
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKY 841
YC +CKEH++A K L +W LP +L+ HLKRF + R++K++ V FP+ D + Y
Sbjct: 1262 VYCSKCKEHQRAIKTLKIWRLPPILIIHLKRFQFHNGRWVKSQ--KIVKFPVRKFDPANY 1319
Query: 842 MKSK 845
+ ++
Sbjct: 1320 VVTR 1323
>gi|326430318|gb|EGD75888.1| hypothetical protein PTSG_11617 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 299/613 (48%), Gaps = 84/613 (13%)
Query: 22 PDEERQ--IVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMN 79
PD + Q +V DL ++ +K ++L+ +W+ +W+R+ G +
Sbjct: 25 PDAQTQKRVVSDLFEKAPA-VKLDQTWYLVDHKWFETWKRFAEGSQ-------------- 69
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
E PGPIDNS + D+ V+ L EG + ++ ++ W +L WY
Sbjct: 70 ------KEPPGPIDNSALF---------DEHGVKPFLAEGYNVHILDEETWRQLVAWY-- 112
Query: 140 GPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRDNSQ--TVIRLSKKASTRQLYEKVCKL 196
G P++ + + ++ E + V L++ + ++ V+ +S+ A QL+E +
Sbjct: 113 GLVHPKQEVKRKTVMREDKCVVDLAYLRVTAVLNGAEKGVVVDVSRTADFDQLHELAKQR 172
Query: 197 RGIEQEKA-RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG------ISM 249
GI + R+ ++ + R + + A L Q + +E Q D+G I
Sbjct: 173 LGIPADTTTRLRNFHLRMRGE--VLSGKAKVGSASLYQKQMVCVETQADDGTWPSDAIEA 230
Query: 250 DSTGND-LALVPIEPSRSS-----------LTIAGGPALSNGHTTGYRFNQYP------- 290
DS + P+ S + LT A S G G + P
Sbjct: 231 DSDAESATSATPVNGSGAEDDMDDDDALGPLTSPSAGAASVGSKRGALASTAPSSSSFAS 290
Query: 291 ------GSSFGSTFMDMDDGYDSYNTAKKG--------EKGGLAGLQNLGNTCFMNSALQ 336
G+ G + Y + G GL NLGNTCFMNSALQ
Sbjct: 291 SSTRGIGAGAGLASLPSASSSTGYGATSHALGSPVAGQPRQGRTGLTNLGNTCFMNSALQ 350
Query: 337 CLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL HT L +YFL G Y +++N +NP+G G LA+A+ +L+ +LW + PR FK
Sbjct: 351 CLSHTLPLTRYFLEGPYKEDLNPDNPIGCGGRLAMAYRELIAQLWQGSARVITPREFKFA 410
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ RFAPQF GY QHDSQEL +FLLDGLHEDLNR++ KPY+EMK++ G D E A W
Sbjct: 411 IGRFAPQFVGYQQHDSQELTSFLLDGLHEDLNRIRDKPYVEMKEAEGE-DAEAAALAWHR 469
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
HK RNDS+IVD+F GQ KSTLVCP C+KVSITFDPFMYL +PLP T+ VTV + +
Sbjct: 470 HKLRNDSIIVDLFHGQLKSTLVCPDCNKVSITFDPFMYLQVPLPENETKVFPVTVSFKDP 529
Query: 516 SGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISS 574
+ P + V L K G + L + + ++ +VY ++++ + E SS
Sbjct: 530 NRPPKRYGVKLPKTTGTISMMCQELEKMTGVSASK-FVVTDVYAGKVWKVLDF-HEKTSS 587
Query: 575 IKDDEHIVAYRFD 587
I+ + ++A+ +
Sbjct: 588 IRTSDSLIAHELE 600
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
A+ L CLD + ++E L D+MW CP CKE ++A K++++W LPD LV HLKRFSY+ +
Sbjct: 830 AVPLTQCLDYYTSKERLTHDNMWRCPVCKEPKEAEKQMEVWKLPDTLVIHLKRFSYNSWW 889
Query: 822 KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
++KLDT V+FP+ LDL Y + + +S VYDL+ +SNH GGLGGGHYTAY
Sbjct: 890 RDKLDTLVDFPLEGLDLGPYVLDPQQHDSAVYDLYGVSNHMGGLGGGHYTAY 941
>gi|410928885|ref|XP_003977830.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Takifugu
rubripes]
Length = 1556
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 264/527 (50%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDN-----SDIIQNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + + S A+RPG IDN +D ++ + EG L+ L G+D+
Sbjct: 500 NNQCFSGANGHIPSQLAAQRPGAIDNQSLVNTDPMKAPTLTLEGGRLKRSLQLVPGRDFE 559
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD-----NSQTVI 178
VP+ VW L+ WY +LPR +I + ++ +E+F L + + S +
Sbjct: 560 TVPEPVWRALYHWYGANLSLPRPVILDSKTSQAELELFPRYLLFLRQQPATRSPQSNVWV 619
Query: 179 RLSKKASTRQLYEKVCKLRG--------------------IEQEKARIWDYFNKQRSTSP 218
+ S ++V G I++E R+W Y N + +
Sbjct: 620 NMGSVPSPNAPLKRVLAYTGCFSRIDTIKDIHLYLSQRLRIKEEDMRLWLY-NSENYLTL 678
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D TL++ +Q +Q ++ ++V N D++ P E
Sbjct: 679 LDDEDHTLENLKIQDEQQLV--IEVRN--------KDMSW-PEE---------------- 711
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
SF + MD K + G GL NLGNTCFMNS++QC+
Sbjct: 712 -------------MSFIANSSKMD-------RHKVPTEKGATGLSNLGNTCFMNSSIQCV 751
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L YFL G + E+N NP+GM G +A +GDL+ +LWS + +VAP + +A
Sbjct: 752 SNTKALTDYFLSGRHLYELNRTNPIGMRGHMAKCYGDLVMELWSGTQKSVAPLKLRWTIA 811
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA+E W+NH
Sbjct: 812 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSNGRPDWEVASEAWENHL 871
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ KS + C C +S FDPF +L+LPLP + +TV GS
Sbjct: 872 RRNRSIVVDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPMDSYMHLEITVIKLEGS- 930
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV+ I F
Sbjct: 931 TPVRYGLRLNMDEKYMGLKKQLSELCSLK-PEQILLAEVHTSNIKNF 976
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E ISL SCL AF +EE LG D+++YC +CK HR ATKKLDLW LP +L+ HLKRF
Sbjct: 1223 RRAQAEPISLDSCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF 1282
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ R++K++ V FP N D S ++ +D
Sbjct: 1283 QFVNGRWIKSQ--KIVKFPRENFDPSAFLAPRD 1313
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L++G +FLIS W++ W+ YV
Sbjct: 368 PGTPEEEGQIIRGWLERESRHGLQQGQNWFLISMLWWQQWKDYV 411
>gi|302850164|ref|XP_002956610.1| hypothetical protein VOLCADRAFT_67166 [Volvox carteri f.
nagariensis]
gi|300258137|gb|EFJ42377.1| hypothetical protein VOLCADRAFT_67166 [Volvox carteri f.
nagariensis]
Length = 656
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 174/269 (64%), Gaps = 25/269 (9%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GLAGL NLGNTCFM+S+LQCL H L + FLG Y ++N NPLGM GELA AFG L+
Sbjct: 1 GLAGLTNLGNTCFMSSSLQCLAHAVPLMRAFLGGGYLQDLNRSNPLGMKGELAEAFGGLM 60
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+LW G +AV PR+FK K+ RFAPQFSGY QHDSQE LAFLLDGLHED NR+K KPYIE
Sbjct: 61 EQLWRGGLSAVTPRSFKAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKNKPYIE 120
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD GRPDE VA E W N++ARNDSL+VD FQG +KST+ CP C S+ FDPFMYL+L
Sbjct: 121 EKDLHGRPDEAVAAEAWSNYRARNDSLVVDHFQGLFKSTVDCPQCGFNSVKFDPFMYLSL 180
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + R + V + + +GS LP + L DL+ A ++ L
Sbjct: 181 PLPESRRRVVEVVLVHTDGSELPSRMALELASGATLGDLLRATASTAGL----------- 229
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYR 585
PAE+++S D H++A R
Sbjct: 230 -----------PAEVVTS--PDSHLLAAR 245
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 96/148 (64%), Gaps = 12/148 (8%)
Query: 736 LYDPSYIKDLPVVHKTGFTVKKTRQEA------ISLFSCLDAFLTEEPLGPDDMW--YCP 787
LYDP + D P H + ++ R+ A +SL +C+ FL E L D W YCP
Sbjct: 417 LYDPELL-DSPSEHPS---LRDQRRRAAAGPQPVSLDACMTTFLQPERLAESDAWWAYCP 472
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG 847
+CK H A KKLDLW LP+VLV HLKRFSY+RY +NKLDT V+FP+ LDL Y+
Sbjct: 473 RCKSHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTPVDFPLHGLDLGPYVLRPQS 532
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAKV 875
VYDLFA+SNHYG +GGGHYTAYAK+
Sbjct: 533 VPPVYDLFAVSNHYGSMGGGHYTAYAKL 560
>gi|145520625|ref|XP_001446168.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413645|emb|CAK78771.1| unnamed protein product [Paramecium tetraurelia]
Length = 1160
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 201/610 (32%), Positives = 311/610 (50%), Gaps = 84/610 (13%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALA 371
K G+ GL NLGNTCFMNS+LQCL + +L +Y + + ++N +NPLG G LA
Sbjct: 549 KNSAKGICGLSNLGNTCFMNSSLQCLSNVTELTEYMIYNTFLQDLNEKNPLGTGGRLACN 608
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ +LL++L+ S +VAP K + + APQF+GY+Q DSQELL++LLDGLHEDLNR+K+
Sbjct: 609 YAELLKELYESTSTSVAPWNVKKIIGQQAPQFNGYSQQDSQELLSYLLDGLHEDLNRIKK 668
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPYI + G+ D+E A+ W NHK RNDS I D+F GQ+KS + CP C+ VSITFDPF
Sbjct: 669 KPYIPDVEYKGQSDQEFADLYWDNHKKRNDSKITDLFTGQFKSRVECPECNFVSITFDPF 728
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
+ ++LP+PS + + + P+ TL ++I +S +K E L
Sbjct: 729 VTISLPIPSKEFVQFQFYLIFRDSKQTPLKIQQTLQSTQTAGEIIEIISKLKNIKA-EYL 787
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEH--IVAYRFDRKQGGKIKLEIVNRWQEKSASD 609
+ + I + + I IK+ + + FD K I +++ K S
Sbjct: 788 KFYSLQDSAIIDNGISSEQTIKQIKESQATTFLYEEFDEKIDKPI-----SKYDSKIKSP 842
Query: 610 YLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
Y + L V EE L+ + I+ +++ Y ++ + L +
Sbjct: 843 Y----HQVLCN---VRKFEENRLNQQNYRISFTRI------CYVDSQTTYQE----LHLI 885
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDW 729
I ++ +H ++ D+ S L+L E K I+K + + LL
Sbjct: 886 IYQIFRTH-----ILQISDITSN-----LNLNKEFEQFLKNIKKCIYKDEFEEYQELLKL 935
Query: 730 TDDVHELYD------PSYIKDL-----PVVHKTGFTVKKTRQEAISLFSCLDA------- 771
+ +++L D P K + P++ F K R E + L C+DA
Sbjct: 936 KESIYQLQDDNNKLLPFTEKQIEGNGKPIILNAQF---KLRAELLKLNRCVDAEFTLQLP 992
Query: 772 ----------------FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
F +EE LG + WYC +CK+H++A K++ ++ P +++ HLKRF
Sbjct: 993 NQSSMQAITLNDCLNQFCSEEVLGAGNEWYCSKCKKHQKAKKQMQIYKAPQIMIMHLKRF 1052
Query: 816 SYSRYLK----------NKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGL 864
SR + K+ +V+FP+ N ++ ++ K+ + YVYDLFA+SNHYGG+
Sbjct: 1053 RSSRVTQFYGTYSVGGVTKIVQYVDFPVENFNIQPFILEKESQQPYVYDLFAVSNHYGGM 1112
Query: 865 GGGHYTAYAK 874
GGGHYTAYAK
Sbjct: 1113 GGGHYTAYAK 1122
>gi|395531796|ref|XP_003767959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Sarcophilus harrisii]
Length = 982
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 253/486 (52%), Gaps = 73/486 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 457 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRAPQLIHGRDYEMVPEPVWRALYHWYGANL 516
Query: 142 ALPRKMISEGIVNE--KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
ALPR + + N KRV + C S+ + ++++E + + I
Sbjct: 517 ALPRPVRNVPSPNAPLKRVLAYTGCF---------------SRMQTIKEIHEYLSQRLRI 561
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALV 259
++E R+W Y N + + LD D L+ L++Q + + ++ D++
Sbjct: 562 KEEDMRLWLY-NSENYLTLLDDEDHMLE----------YLKIQDEQHLVIEVRNKDMSW- 609
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
P E S F+ D + EKG
Sbjct: 610 PEEMS---------------------------------FIANSSKIDRHKVPT--EKGA- 633
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+++
Sbjct: 634 TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQE 693
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
LWS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+K
Sbjct: 694 LWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELK 753
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
DS GRPD EVA E W NH RN S++VD+F GQ +S + C C +S+ FDPF +L+LPL
Sbjct: 754 DSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVRCKTCGHISVRFDPFNFLSLPL 813
Query: 499 PSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYN 558
P + +TV +G+ P+ + + L L LS C LK E +LLAEV+
Sbjct: 814 PMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGLKKQLSDLCGLK-PEQILLAEVHG 871
Query: 559 HQIFRF 564
I F
Sbjct: 872 SNIKNF 877
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 306 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 349
>gi|348532251|ref|XP_003453620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Oreochromis
niloticus]
Length = 1585
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 269/527 (51%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDN-----SDIIQNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + + S A+RPG IDN +D ++ + EG L+ L +D+
Sbjct: 502 NNQCFSGANGHLPSQLAAQRPGAIDNQPLVTTDPMKAPTLTMEGGRLKRSLQLLPRRDFE 561
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVF---XLCLKLIDSRDNSQTVIRL 180
VP+ VW L+ WY +LPR +I E + +E+F L L+ + + Q+ I +
Sbjct: 562 TVPEPVWRALYHWYGANLSLPRPVILESKTGQPELELFPRYLLFLRQQPATRSPQSNIWV 621
Query: 181 ----------------------SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ + + ++ + + I++E R+W Y N + +
Sbjct: 622 NMGNVPSPNAPLKRMLAYTGCFSRMGTIKDIHLYLSQRLRIKEEDMRLWLY-NSENYLTL 680
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D TL+ +Q +Q ++ ++V N D++ P E
Sbjct: 681 LDDEDHTLESLKIQDEQQLV--IEVRN--------KDMSW-PEE---------------- 713
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
SF + MD K + G GL NLGNTCFMNS++QC+
Sbjct: 714 -------------MSFIANSSKMD-------RHKVPTEKGATGLSNLGNTCFMNSSIQCV 753
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L YFL G + E+N NP+GM G +A +GDL+ +LWS + VAP + +A
Sbjct: 754 SNTKPLTDYFLSGKHLYELNRTNPIGMRGHMAKCYGDLVMELWSGTQKNVAPLKLRWTIA 813
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA+E W+NH
Sbjct: 814 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVASEAWENHL 873
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S++VD+F GQ KS + C C +S FDPF +L+LPLP + + +TV +GS
Sbjct: 874 RRNRSIVVDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPMDSSMHLEITVIKLDGS- 932
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV++ I F
Sbjct: 933 TPVRYGLRLNMDEKYTGLKKQLSELCSLK-PEQILLAEVHSSNIKNF 978
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E ISL SCL AF +EE LG D+++YC +CK HR ATKKLDLW LP +L+ HLKRF
Sbjct: 1218 RRAQAEPISLDSCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF 1277
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKDGE 848
+ R++K++ V FP N D S ++ +D E
Sbjct: 1278 QFVNGRWIKSQ--KIVKFPRENFDPSAFLAPRDLE 1310
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L++G +FLIS W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRHGLQQGQNWFLISMLWWQQWKDYV 411
>gi|167534029|ref|XP_001748693.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772934|gb|EDQ86580.1| predicted protein [Monosiga brevicollis MX1]
Length = 1086
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 213/352 (60%), Gaps = 19/352 (5%)
Query: 264 SRSSLTIAGGPAL-SNGHTTGYRFNQYPGSSFG--STFMDMDDGYDS-YNTAKKGEKGGL 319
S S T+A P+ S+G + + GS +G ST + GY S Y T+ G G
Sbjct: 350 SSSGQTVAAVPSYNSSGGISSTSYANGTGSGYGPGSTLTNRSYGYSSNYGTSTYGGSYGR 409
Query: 320 A----------GLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGEL 368
A GL+NLGNTCFMNSALQCL H DL Q+FL G + ++N NP+G G L
Sbjct: 410 ASNKPILPGRTGLRNLGNTCFMNSALQCLSHCADLRQFFLSGRWQQDLNKNNPIGCDGHL 469
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A A+ +LL KLWS+ +A V+P K +++FAPQFSGY QHDSQEL AFLLDGLHEDLNR
Sbjct: 470 AEAYAELLEKLWSATQADVSPWHLKDTISKFAPQFSGYQQHDSQELTAFLLDGLHEDLNR 529
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+++KP++E K++ G D A E W H RNDS+IVD+FQGQ KSTL CP C+K+S+TF
Sbjct: 530 IQKKPFVEAKEAEGE-DVTAAREAWTRHLLRNDSIIVDLFQGQIKSTLNCPECNKISVTF 588
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL-MKHGCCKDLILALSTACCLKI 547
DP MYL++P+P T T+TV +A+ P TV L K G +++I A++ ++
Sbjct: 589 DPMMYLSVPIPELDTTFFTITVVFADPRRAPAKCTVELPAKSGTMREMIAAVAEETAVE- 647
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIV 599
L+ ++Y+ + ++ F+ + + +I + + + + +G E++
Sbjct: 648 PRSLVATDLYHSRFYKIFDG-HDTMGNITNGDDVAIFEVPPLEGASWSDEVI 698
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGH 868
+ ++K+DT V FP+ LD+S Y+ S K E +YD FA+SNH GG GGGH
Sbjct: 941 FYRDKIDTLVEFPLEGLDMSPYVLSPKHREGAIYDCFAVSNHSGGYGGGH 990
>gi|219109702|ref|XP_002176605.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411140|gb|EEC51068.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 603
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 303/599 (50%), Gaps = 77/599 (12%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
+GL NLGNTCFMNS LQCL HT L +YFL G+Y D++N NPLG G+LA F L+
Sbjct: 1 SGLGNLGNTCFMNSTLQCLAHTHPLKRYFLSGEYGDDLNRNNPLGTGGDLATQFAQLMMD 60
Query: 379 LW---------------------SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+W S V PR FK L + A +F GY+QHDSQEL +
Sbjct: 61 IWITTAPPRNFLSEASTGYDSSSSLANNVVYPRNFKYTLGKHAERFVGYDQHDSQELATY 120
Query: 418 LLDGLHEDLNRVKQKPYIEM-KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
LLD LHED N V +KPY+E + D+E A+ W+ H R +S +++ F GQ KS +
Sbjct: 121 LLDALHEDTNLVTKKPYVEKPEQKDTESDQEAADNAWELHLKRENSKVLENFMGQIKSRV 180
Query: 477 VC--PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKD 534
C C++VS TFDPFMYL++P+P ++ R + VT N +T+ K K+
Sbjct: 181 QCCKANCNRVSTTFDPFMYLSVPIPGSMERILKVTYVPMNPQQRMQKLEITISKMATMKE 240
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD----RKQ 590
L L T L + E ++++ +++ ++E P + I+D+++ Y K
Sbjct: 241 LFGLLKTIDDLAL-EDTCAVDIWHQEVYSWYE-PKNEVDRIRDNDYTFLYELAPLAMVKA 298
Query: 591 GGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR 650
G+ L + ++ D G+ K + L T + SG D +S L
Sbjct: 299 MGQTVLNGI-----ETDDDVGLGTITKHYQLDLATMTKLN--SGDDWSAKLSTYLQNPTM 351
Query: 651 TYSSAKAHGGKENGFLPEVIDELSNSHN-----ESVE-TAELEDLCSRE----LSFQLSL 700
++S++ + E+++ +N + E E +A LE++ SR L F S
Sbjct: 352 LHNSSRDNCS-------ELVNTSTNEEDVLDIIERCESSAFLENVRSRHDLAILEFIASK 404
Query: 701 TDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVV---HKTGFTVKK 757
+ I S + Q+ ++ G I++ +I+ ++ H+T V +
Sbjct: 405 MRKEIVSLEN-QQTTMYPDGVIIQI---------------HIRKATLLSGNHRTDECVAR 448
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
A ++ C++ + E L +MWYC +CK+H +A K+ L+ P +L+ HLKRF Y
Sbjct: 449 KSSNATTVLDCIEKYCQMEQLEDTEMWYCNKCKDHVRAWKQTHLYRCPPILIVHLKRFQY 508
Query: 818 SR--YLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYA 873
S + ++K+ F++FP+ LDL+ G E +YD +A+SNHYGGLGGGHYTAYA
Sbjct: 509 SSSTHRRDKIGLFIDFPLEGLDLTSVALHWTGAEKPLYDCYAVSNHYGGLGGGHYTAYA 567
>gi|241594842|ref|XP_002404393.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215500387|gb|EEC09881.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 1583
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 246/460 (53%), Gaps = 83/460 (18%)
Query: 75 SPHMNGVSSKR----AERPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLV 125
SP VS K +RP IDN+ +I + EG L+ + L +G+D+ V
Sbjct: 445 SPKCPSVSRKLLPAFPQRPPSIDNTGLIVPNTVKAMVLTGEGGRLQRQVPLCQGRDFEAV 504
Query: 126 PQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSR---------DNSQT 176
P+ VW LF WY G PALPR+++ +E++ + L+L + ++S T
Sbjct: 505 PEAVWRALFQWYGGSPALPRQVVRPTPGASPELELYPITLRLYRHQAPPGPPRHPNSSWT 564
Query: 177 VI----------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLD 220
+ S+ A+ RQ+++ +C + E +R+W N + + + L+
Sbjct: 565 AVVGSPSLTPKRYLAYLASFSRAATLRQVFDFLCTRLRLRPEDSRLWQ-LNDENNLTLLE 623
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
TL+ ++ + IL+EV+ + D T P S I +
Sbjct: 624 EEGLTLEQLGIEDGEQILIEVR-----NKDQTW---------PEEMSCII---------N 660
Query: 281 TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVH 340
+ + NQ P +KG G L NLGNTCFMN+ALQC+ +
Sbjct: 661 SKIDQKNQGP--------------------TEKGATG----LNNLGNTCFMNAALQCVSN 696
Query: 341 TPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
T L QYF+G+ + E+N NPLGM G +A +GDL+ LWS VAP + + ++
Sbjct: 697 TRPLTQYFIGEKHLYELNRLNPLGMKGHIAKRYGDLVHDLWSGTSKTVAPLKLRWTIGKY 756
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKAR 459
AP+F+G+ QHDSQELLAFLLDGLHEDLNRV++KPY+E+KDS GRPD+EVA E W+NH R
Sbjct: 757 APRFNGFQQHDSQELLAFLLDGLHEDLNRVQEKPYVELKDSAGRPDDEVAREAWENHALR 816
Query: 460 NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
N S++VD+F GQ +ST+ C VCS S+ FDPF +L+LPLP
Sbjct: 817 NRSVVVDLFHGQLQSTVTCKVCSHTSVRFDPFNFLSLPLP 856
>gi|444721005|gb|ELW61765.1| Ubiquitin carboxyl-terminal hydrolase 32 [Tupaia chinensis]
Length = 1622
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 422 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGKDYEMVPEPVWRALYHWYGANL 481
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 482 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 541
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 542 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 591
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 592 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 617
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 618 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 673
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 674 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 733
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 734 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 793
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +GS P+ + + L L
Sbjct: 794 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGS-TPVRYGLRLNMDEKYTGL 852
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 853 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 880
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V +DW L + + + H++ ++ + E I+L SCL AF EE LG ++M+
Sbjct: 1263 VAVDWDPTALHLRYQTSQERVVDEHESVEQSRRAQAEPINLDSCLRAFTNEEELGENEMY 1322
Query: 785 YCPQCKEHRQATKKLDLWMLPDVL 808
YC +CK H ATKKLDLW LP +L
Sbjct: 1323 YCSKCKTHCLATKKLDLWRLPPIL 1346
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 149/190 (78%), Gaps = 1/190 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GL NLGNT FMNSALQCL +T L YFL D Y EIN +NPLGM GE+A A+ +L+
Sbjct: 7 GLCGLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELI 66
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++WS A VAPR FK ++ RFAPQFSGY Q DSQELLAFLLDGLHEDLNRVK+KPY+E
Sbjct: 67 KQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLE 126
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+TFDPF YLTL
Sbjct: 127 LKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL 186
Query: 497 PLPSTVTRTM 506
PLP R M
Sbjct: 187 PLPLKKDRVM 196
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 88/119 (73%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
+K ++ ++L C++ F T E LG D WYCP CK+H+QATKK DLW LP +LV HLKRF
Sbjct: 204 QKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRF 263
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SY+RY ++KLDT V FPI L++S+++ + YVYDL A+SNHYG +G GHYTAYAK
Sbjct: 264 SYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYAK 322
>gi|390345682|ref|XP_003726385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32
[Strongylocentrotus purpuratus]
Length = 1718
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 238/480 (49%), Gaps = 99/480 (20%)
Query: 88 RPGPIDNSDIIQNGNG------SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
+PGPIDN+ ++ N ++EG L + + +DY ++P VW+ L WY GGP
Sbjct: 545 KPGPIDNTSLVAADNKKQVSTLTNEGGRLRRHPPISQNKDYEIIPDPVWKALALWYAGGP 604
Query: 142 ALPRKMISEGIVNEK---RVEVFXLCLKL------------------------------- 167
ALPR +I + ++E++ LC+KL
Sbjct: 605 ALPRNVIVQPTTQGNTSCKLELYPLCVKLLRHQTPQVKQNGWSGVNLGLGNISLSSSGLG 664
Query: 168 IDSRDNSQT----------VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTS 217
I+ NS T V SK + +Q+++ + + E+ R+W+ + +
Sbjct: 665 INISGNSGTPQAPKRYQAYVACFSKMHTLQQVHDFLSARLRVRTEEMRLWN-LKDENNPV 723
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALS 277
L+ TLD + +Q +L+E++ + +S + LA + S T G LS
Sbjct: 724 VLEEDSSTLDQLGIADEQSLLIEIR-NKDLSWPEEMSLLAKKKADRQSSVRTDKGVTGLS 782
Query: 278 NGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQC 337
N LGNTCFMNSA+QC
Sbjct: 783 N----------------------------------------------LGNTCFMNSAVQC 796
Query: 338 LVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKL 396
+ +T L YF Y E+N NPLGM G LA +GDL LWS ++AP + +
Sbjct: 797 ISNTQPLRLYFQTKSYLYELNPTNPLGMKGHLAKRYGDLCNDLWSGTARSIAPLKLRWTI 856
Query: 397 ARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNH 456
A++AP+FSG+ QHDSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPDEEVA E W+NH
Sbjct: 857 AKYAPRFSGFQQHDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDEEVATEAWENH 916
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
RN S+IVD+FQGQ KS + C C +S+ FDPF +L+LPLP + + + V +GS
Sbjct: 917 LIRNKSVIVDLFQGQLKSQVRCKTCGHISVRFDPFTFLSLPLPMESSMHVEIVVVRLDGS 976
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 5/109 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L CL AF EE LG D+++YC +CK+HR A KKLD+W LP +L
Sbjct: 1324 HESCENSRRLQTEPINLDDCLRAFTKEEELGEDELYYCSKCKQHRLAAKKLDIWRLPPIL 1383
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDL 854
+ HLKRF R++K++ V FP N ++S ++ K D E + D+
Sbjct: 1384 IVHLKRFQSVNGRWVKSQ--KIVKFPKRNFNVSNFVVPKGDTEPRIIDV 1430
>gi|340503530|gb|EGR30106.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 549
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 283/538 (52%), Gaps = 49/538 (9%)
Query: 350 GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
+Y +++N EN LG G L++A+ +L++++W +++++P K + + APQF GYNQ
Sbjct: 4 NEYLNDLNPENKLGTGGYLSVAYSNLMKEMWQGNQSSISPHILKKVIGKLAPQFMGYNQQ 63
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEM--KDSGGRPDEEVANECWKNHKARNDSLIVDV 467
DSQELL+++LDGLHEDLNR+K+KP IE D G D+ ++ + +N+K RNDS+I D+
Sbjct: 64 DSQELLSYILDGLHEDLNRIKEKPLIENIEYDGGSNNDQLISQKFNENYKKRNDSIIADL 123
Query: 468 FQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
GQ+KSTL CP C K+SITFDP+M L+LP+P R + + Y + P ++ L
Sbjct: 124 ILGQFKSTLECPTCGKISITFDPYMTLSLPIPQENYRQIQFFIIYKDSRVTPTQLSLKLD 183
Query: 528 KHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ L L + E L + + I + FEN E I I+ + +
Sbjct: 184 SNTTILQLKQILYQYTKINA-ENLEFCNLKDFYITQIFEN-NETIKVIEQYGNQNIFYLQ 241
Query: 588 RKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSP 647
+ Q KI L + +++ +K + + Y+ ++ I I + K
Sbjct: 242 QFQIPKI-LVMNDQFIQKR------------YFNTITIYIIIQNNQSEPIPILLRK---- 284
Query: 648 LRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISS 707
R+ N + E+I ++ +N + + +D RE+ F+ E S
Sbjct: 285 -RQKTEQINLQDDDTNTIIQEIIQ--NSKYNADLFNFKNQD--GREIPFE---NCENKSI 336
Query: 708 CKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYI---KDLPVVHKTGFTVKKTRQEAIS 764
+ I K K +I++LL + +LY + KD ++ + KK I+
Sbjct: 337 SQYIDKGKEGKECLNIRMLLQKNSE-KQLYKFNRYKDEKDTKILENSNLLDKK-----IT 390
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF------SYS 818
+ CL F +E L + WYC +CKEH++A+K + ++ +P +L+ HLKRF ++
Sbjct: 391 IQKCLQEFTKKEILESGNEWYCNKCKEHKKASKIMQIYSVPKILIIHLKRFKSGKMRNFG 450
Query: 819 RYL----KNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTA 871
+Y K+D FVNF I NLDLS ++ SK + ++Y+YDLFA+S HYGG GGHYTA
Sbjct: 451 KYFFESEGKKIDDFVNFEIQNLDLSDFVISKFNQQNYIYDLFAVSQHYGGTSGGHYTA 508
>gi|332258921|ref|XP_003278539.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 32 [Nomascus leucogenys]
Length = 1568
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 252/486 (51%), Gaps = 73/486 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 521 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 580
Query: 142 ALPRKMISEGIVNE--KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
ALPR + + N KRV + C S+ + ++++E + + I
Sbjct: 581 ALPRPVRNVPSPNAPLKRVLAYTGCF---------------SRMQTIKEIHEYLSQRLRI 625
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALV 259
++E R+W Y N + + LD D L+ L++Q + + ++ D++
Sbjct: 626 KEEDMRLWLY-NSENYLTLLDDEDHQLE----------YLKIQDEQHLVIEVRNKDMSW- 673
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
P E S F+ D + K + G
Sbjct: 674 PEEMS---------------------------------FIANSSKIDRH---KVPTEKGA 697
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+++
Sbjct: 698 TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQE 757
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
LWS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+K
Sbjct: 758 LWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELK 817
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
DS GRPD EVA E W NH RN S++VD+F GQ +S + C C +S+ FDPF +L+LPL
Sbjct: 818 DSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPL 877
Query: 499 PSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYN 558
P + +TV +G+ P+ + + L L LS C L E +LLAEV+
Sbjct: 878 PMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLSDLCGLN-SEQILLAEVHG 935
Query: 559 HQIFRF 564
I F
Sbjct: 936 SNIKNF 941
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1183 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1242
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1243 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1280
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 370 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 413
>gi|338710993|ref|XP_001503831.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Equus
caballus]
Length = 1605
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 520 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 579
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 580 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 639
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 640 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 689
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 690 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 715
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 716 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 771
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 772 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 831
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 832 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 891
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 892 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 950
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 951 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 978
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP VL
Sbjct: 1220 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPVL 1279
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1280 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1317
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV D + + S
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYVKYDASPV--VIEPSSV 425
Query: 78 MNGVSSKRAERPGPIDNS-DIIQNGNGS 104
+NG P++ S D I+ GN S
Sbjct: 426 LNGGKYSFGTAVHPVEQSEDRIRGGNLS 453
>gi|432113608|gb|ELK35890.1| Ubiquitin carboxyl-terminal hydrolase 32 [Myotis davidii]
Length = 1647
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 558 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 617
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 618 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 677
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 678 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 727
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 728 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 753
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 754 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 809
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 810 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 869
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 870 AFLLDGLHEDLNRVHEKPYVELKDSNGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 929
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 930 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 988
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 989 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 1016
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L +CL AF +EE LG ++M+
Sbjct: 1234 IAVDWDPTALHLRYQTSQERVADEHESVEQSRRAQAEPINLDNCLRAFTSEEELGENEMY 1293
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP VL+ HLKRF + R++K++ V FP + D S ++
Sbjct: 1294 YCSKCKTHCLATKKLDLWRLPPVLIIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFL 1351
Query: 843 KSKD 846
++
Sbjct: 1352 VPRN 1355
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 407 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKDYV 450
>gi|354477156|ref|XP_003500788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Cricetulus
griseus]
Length = 1771
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 259/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 686 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 745
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 746 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 805
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 806 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 855
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 856 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 881
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 882 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 937
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 938 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 997
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 998 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 1057
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 1058 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 1116
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV++ I F
Sbjct: 1117 KKQLSDLCGLK-SEQILLAEVHSSNIKNF 1144
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1386 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1445
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1446 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1483
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 535 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 578
>gi|351698664|gb|EHB01583.1| Ubiquitin carboxyl-terminal hydrolase 32 [Heterocephalus glaber]
Length = 1565
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 479 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 538
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 539 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 598
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 599 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 648
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 649 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 674
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 675 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 730
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 731 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 790
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 791 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 850
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 851 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 909
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 910 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 937
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP VL+ HLKRF
Sbjct: 1186 RRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPVLIIHLKRF 1245
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ R++K++ V FP +LD S ++ +D
Sbjct: 1246 QFVNGRWIKSQ--KIVKFPRESLDPSAFLVPRD 1276
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 327 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 370
>gi|426237054|ref|XP_004012476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Ovis aries]
Length = 1275
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 190 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLVHGRDYEMVPEPVWRALYHWYGANL 249
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 250 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 309
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 310 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 359
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 360 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 385
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 386 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 441
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 442 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 501
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 502 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 561
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 562 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 620
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 621 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 648
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 890 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 949
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 950 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 987
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 38 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 81
>gi|297486436|ref|XP_002695689.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Bos taurus]
gi|296476967|tpg|DAA19082.1| TPA: ubiquitin specific peptidase 32 [Bos taurus]
Length = 1543
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 458 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 517
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 518 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 577
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 578 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 627
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 628 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 653
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 654 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 709
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 710 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 769
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 770 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 829
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 830 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 888
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 889 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 916
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1158 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1217
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
+ HLKRF + R++K++ V FP + D S ++
Sbjct: 1218 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFL 1251
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 306 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 349
>gi|345330137|ref|XP_001510553.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Ornithorhynchus
anatinus]
Length = 1718
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 259/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 632 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRIPQLIHGRDYEMVPEPVWRALYHWYGANL 691
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I N +E+F L + + ++T
Sbjct: 692 ALPRPVIKNSKTNIPELELFPRHLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 751
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 752 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHMLE--------- 801
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 802 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 827
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 828 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 883
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 884 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 943
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W+NH RN S++VD+F GQ +S
Sbjct: 944 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWENHLRRNRSIVVDLFHGQLRSQ 1003
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 1004 VRCKTCRHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 1062
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 1063 KKQLSDLCELK-PEQILLAEVHGSNIKNF 1090
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L +CL AF EE LG D+M+
Sbjct: 1308 IAVDWDPTALHLRYQTSQERIVEEHESVEQSRRAQAEPINLDNCLRAFTNEEELGEDEMY 1367
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP N + ++
Sbjct: 1368 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRENFNPGAFL 1425
Query: 843 KSKD 846
+D
Sbjct: 1426 VPRD 1429
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 480 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 523
>gi|427788383|gb|JAA59643.1| Putative ubiquitin c-terminal hydrolase [Rhipicephalus pulchellus]
Length = 1611
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 252/484 (52%), Gaps = 32/484 (6%)
Query: 86 AERPGPIDNSDIIQNGNGSSE---GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
+RP IDNS ++ + + G+ + R L G+D+ VP+ +W LF WY G PA
Sbjct: 528 VQRPPSIDNSGLVVPNSVKAAVLTGEGGRLVRPLTRGRDFEAVPEAIWRALFQWYGGSPA 587
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK--LRGIE 200
LPR+ I G + +E++ CL+L +Q R +S + V + G+
Sbjct: 588 LPRQCIRSG-GSTPELELYPPCLRLW-RHQQAQCGPRQPNSSSWTSVVGSVASAYVGGVA 645
Query: 201 --QEKARIWDYFNKQRSTSPLDVSDQTLD----DAMLQMDQDILLEVQVDNGISMDSTGN 254
Q Y Q S S Q D L+ + L ++Q +N
Sbjct: 646 PGQPSTSPKRYLAYQASFSRTSTLRQVFDFLCTRLRLRPEDTRLWQLQDENN-------- 697
Query: 255 DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG 314
L P+E +L G + +G + ++ D N
Sbjct: 698 ---LTPLEEEGFTLEQLG---IEDGEQILIEVRNKDQTWPEEMSCIINSKVDQKNQGPT- 750
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
EKG GL NLGNTCFMN+ALQC+ +T L QYF+ + + E+N NPLGM G +A +G
Sbjct: 751 EKGA-TGLNNLGNTCFMNAALQCVSNTRPLTQYFINEKHLYELNRMNPLGMKGHIAKRYG 809
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
DL+ LWS VAP + + ++AP+F+G+ QHDSQELLAFLLDGLHEDLNRV++KP
Sbjct: 810 DLVHDLWSGTSKTVAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGLHEDLNRVQEKP 869
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
Y+E+KDS GRPD+EVA E W+NH RN S++VD+F GQ +ST+ C VC S+ FDPF +
Sbjct: 870 YVELKDSAGRPDDEVAREAWENHALRNRSVVVDLFHGQLQSTVTCKVCGHTSVRFDPFNF 929
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLL 553
L+LPLP + V V +GS +P+ + + L + LS C L + LLL
Sbjct: 930 LSLPLPMESCVHVEVVVVRLDGS-MPIRYGLQLNPDERYLSVKQQLSPLCGLAPQQ-LLL 987
Query: 554 AEVY 557
AEV+
Sbjct: 988 AEVW 991
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 754 TVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+V++TRQ E IS+ CL AF EE LG + +YC +CK+H+ ATKKL ++ LP +L+
Sbjct: 1312 SVERTRQQKVEPISVHDCLAAFTKEEQLGDREKYYCSRCKQHQLATKKLQIYRLPPILII 1371
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
HLKRF K V FP + D + Y+
Sbjct: 1372 HLKRFQLLNGKWVKSQKIVRFPFKDFDPTDYL 1403
>gi|291405658|ref|XP_002719128.1| PREDICTED: ubiquitin specific protease 32 [Oryctolagus cuniculus]
Length = 1607
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 259/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 522 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 581
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 582 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 641
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 642 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 691
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 692 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 717
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 718 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 773
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 774 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 833
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 834 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 893
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 894 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 952
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV++ I F
Sbjct: 953 KKQLSDLCGLK-PEQILLAEVHSSNIKNF 980
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 754 TVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+V+++RQ E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L+
Sbjct: 1224 SVEQSRQAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPILII 1283
Query: 811 HLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1284 HLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1319
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 372 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 415
>gi|427793919|gb|JAA62411.1| Putative ubiquitin c-terminal hydrolase, partial [Rhipicephalus
pulchellus]
Length = 1519
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 252/484 (52%), Gaps = 32/484 (6%)
Query: 86 AERPGPIDNSDIIQNGNGSSE---GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
+RP IDNS ++ + + G+ + R L G+D+ VP+ +W LF WY G PA
Sbjct: 436 VQRPPSIDNSGLVVPNSVKAAVLTGEGGRLVRPLTRGRDFEAVPEAIWRALFQWYGGSPA 495
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCK--LRGIE 200
LPR+ I G + +E++ CL+L +Q R +S + V + G+
Sbjct: 496 LPRQCIRSG-GSTPELELYPPCLRLW-RHQQAQCGPRQPNSSSWTSVVGSVASAYVGGVA 553
Query: 201 --QEKARIWDYFNKQRSTSPLDVSDQTLD----DAMLQMDQDILLEVQVDNGISMDSTGN 254
Q Y Q S S Q D L+ + L ++Q +N
Sbjct: 554 PGQPSTSPKRYLAYQASFSRTSTLRQVFDFLCTRLRLRPEDTRLWQLQDENN-------- 605
Query: 255 DLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKG 314
L P+E +L G + +G + ++ D N
Sbjct: 606 ---LTPLEEEGFTLEQLG---IEDGEQILIEVRNKDQTWPEEMSCIINSKVDQKNQGPT- 658
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
EKG GL NLGNTCFMN+ALQC+ +T L QYF+ + + E+N NPLGM G +A +G
Sbjct: 659 EKGA-TGLNNLGNTCFMNAALQCVSNTRPLTQYFINEKHLYELNRMNPLGMKGHIAKRYG 717
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
DL+ LWS VAP + + ++AP+F+G+ QHDSQELLAFLLDGLHEDLNRV++KP
Sbjct: 718 DLVHDLWSGTSKTVAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGLHEDLNRVQEKP 777
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
Y+E+KDS GRPD+EVA E W+NH RN S++VD+F GQ +ST+ C VC S+ FDPF +
Sbjct: 778 YVELKDSAGRPDDEVAREAWENHALRNRSVVVDLFHGQLQSTVTCKVCGHTSVRFDPFNF 837
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLL 553
L+LPLP + V V +GS +P+ + + L + LS C L + LLL
Sbjct: 838 LSLPLPMESCVHVEVVVVRLDGS-MPIRYGLQLNPDERYLSVKQQLSPLCGLAPQQ-LLL 895
Query: 554 AEVY 557
AEV+
Sbjct: 896 AEVW 899
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 754 TVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+V++TRQ E IS+ CL AF EE LG + +YC +CK+H+ ATKKL ++ LP +L+
Sbjct: 1220 SVERTRQQKVEPISVHDCLAAFTKEEQLGDREKYYCSRCKQHQLATKKLQIYRLPPILII 1279
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
HLKRF K V FP + D + Y+
Sbjct: 1280 HLKRFQLLNGKWVKSQKIVRFPFKDFDPTDYL 1311
>gi|327283828|ref|XP_003226642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Anolis
carolinensis]
Length = 1599
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 256/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDIIQNGNGSS-----EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
+RPG IDN ++ + EG L+ L +G+ Y +VP+ VW L+ WY
Sbjct: 516 QRPGAIDNQPLVTQDPMKAPTLTLEGGRLKQSPPLVQGKSYEIVPEPVWRALYHWYGANL 575
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
+LPR +I +E+F L + + ++T
Sbjct: 576 SLPRPVIVNNATRHPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPSAPLKRVLAY 635
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D TL+
Sbjct: 636 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHTLE--------- 685
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L +Q D + ++ D++ P E S
Sbjct: 686 -YLNIQDDQHLIIEVRNKDMSW-PEEMS-------------------------------- 711
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 712 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 767
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + +AP + +A++AP+F+G+ Q DSQELL
Sbjct: 768 LNRTNPIGMKGHMAKCYGDLIQELWSGTQKNIAPLKLRWTIAKYAPRFNGFQQQDSQELL 827
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W+NH RN S++VD+F GQ +S
Sbjct: 828 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWENHLRRNRSIVVDLFHGQLRSQ 887
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + + V +G+ P+ + + L L
Sbjct: 888 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHIEIIVTKLDGT-TPVRYGLRLNMDEKYTGL 946
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV++ I F
Sbjct: 947 KKHLSDLCALK-PEQILLAEVHSSNIKNF 974
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF EE LG D+M+
Sbjct: 1193 LAVDWDPTALHLRYQTSQERIAEEHRSVEQSRRAQAEPINLDSCLRAFTGEEELGEDEMY 1252
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP + + S ++
Sbjct: 1253 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPREDFNPSAFL 1310
Query: 843 KSKDGESYVYDLFAI 857
+D + A+
Sbjct: 1311 MPRDPSCWAQKPVAL 1325
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P TP+EE QI++ L+ +S L+ G+ +FLI+ W++ W+ YV D + + S
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFLIAMPWWQQWKDYVKYDASPV--VIEPSSV 425
Query: 78 MNGVSSKRAERPGP 91
+NG + RPGP
Sbjct: 426 LNG---GKNLRPGP 436
>gi|358417223|ref|XP_869385.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 3 [Bos
taurus]
Length = 1597
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 512 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 571
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 572 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 631
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 632 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 681
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 682 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 707
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 708 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 763
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 764 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 823
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 824 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 883
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 884 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 942
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 943 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 970
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1212 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1271
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
+ HLKRF + R++K++ V FP + D S ++
Sbjct: 1272 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFL 1305
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 360 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 403
>gi|345805692|ref|XP_537710.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 1
[Canis lupus familiaris]
Length = 1275
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 190 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 249
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 250 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 309
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 310 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 359
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 360 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 385
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 386 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 441
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 442 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 501
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 502 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 561
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 562 VRCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 620
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 621 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 648
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 890 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 949
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP N D S ++ +D
Sbjct: 950 IIHLKRFQFVNGRWIKSQ--KIVKFPRENFDPSAFLVPRD 987
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 38 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 81
>gi|344285327|ref|XP_003414413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Loxodonta
africana]
Length = 1617
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 266/520 (51%), Gaps = 81/520 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 532 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 591
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 592 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 651
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 652 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 701
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 702 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 727
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L +YF+ G + E
Sbjct: 728 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTRYFISGRHLYE 783
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 784 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 843
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 844 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 903
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 904 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 962
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
LS C LK D+ +LLAEV++ I F ++ ++ S+
Sbjct: 963 KKQLSDLCGLKSDQ-ILLAEVHSSNIKNFPQDNQKIRLSV 1001
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1232 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1291
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1292 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1329
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 380 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 423
>gi|440908871|gb|ELR58849.1| Ubiquitin carboxyl-terminal hydrolase 32, partial [Bos grunniens
mutus]
Length = 1586
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 501 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 560
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 561 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 620
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 621 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 670
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 671 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 696
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 697 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 752
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 753 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 812
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 813 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 872
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 873 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 931
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 932 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 959
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1201 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1260
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
+ HLKRF + R++K++ V FP + D S ++
Sbjct: 1261 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFL 1294
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 349 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 392
>gi|449688380|ref|XP_002169084.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Hydra magnipapillata]
Length = 565
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 174/273 (63%), Gaps = 4/273 (1%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ K GL GL N+GNTCFMNSALQCL +T L +YFL + Y E+N NPLGM G++A
Sbjct: 10 RTTKPGLCGLANIGNTCFMNSALQCLSNTTPLTKYFLSNTYKHELNPNNPLGMQGKIAET 69
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ +LL +W S PR FK ++ RFAPQFSGY Q DS ELLAFLLDGLHEDLNRVKQ
Sbjct: 70 YAELLHHVWGSN-TYFTPRNFKMQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRVKQ 128
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPYIE++D GRPDE A E W NH RN S+IVD+F G +KST+ CPVC K S+TFDPF
Sbjct: 129 KPYIELQDDKGRPDEICAEEAWSNHTLRNSSIIVDLFHGLFKSTVKCPVCQKKSMTFDPF 188
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL+LPLP R + + + S P+ + K G DL A+ ++ L
Sbjct: 189 CYLSLPLPIKKERNLGIKFIPLDTSKTPLKVKAIVPKLGNILDLTSAVGNLTSTDPNK-L 247
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
++A+V+ + + +E P E +S I D + I Y
Sbjct: 248 MVADVFGSKFHKIYE-PNESLSQITDRDDITIY 279
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 47/60 (78%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ ++L CLD FL EE LG DD WYCPQCKEHRQA KK DLW LP VLV HLKRFSY+R
Sbjct: 506 KKTVNLNDCLDLFLQEEKLGEDDPWYCPQCKEHRQAFKKFDLWTLPKVLVIHLKRFSYNR 565
>gi|410980578|ref|XP_003996654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Felis catus]
Length = 1275
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 190 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 249
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 250 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 309
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 310 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 359
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 360 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 385
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 386 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 441
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 442 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 501
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 502 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 561
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 562 VRCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 620
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 621 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 648
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 890 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 949
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 950 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 987
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 38 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 81
>gi|348567432|ref|XP_003469503.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Cavia
porcellus]
Length = 1562
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 476 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 535
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 536 ALPRPVIKNTKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 595
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 596 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 645
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 646 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 671
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 672 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 727
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 728 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 787
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 788 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 847
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 848 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 906
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 907 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 934
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 4/93 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E I+L SCL AF EE LG ++M+YC +CK H ATKKLDLW LP +L+ HLKRF
Sbjct: 1183 RRAQAEPINLDSCLRAFTNEEELGENEMYYCSKCKTHCLATKKLDLWRLPPILIIHLKRF 1242
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ R++K++ V FP N D S ++ +D
Sbjct: 1243 QFVNGRWIKSQ--KIVKFPRENFDPSAFLVPRD 1273
Score = 42.7 bits (99), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 325 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 368
>gi|13560797|gb|AAK30207.1|AF350251_1 ubiquitin specific protease [Homo sapiens]
Length = 1274
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 189 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 248
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 249 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 308
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 309 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHKLE--------- 358
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 359 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 384
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 385 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 440
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 441 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 500
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F+GQ +S
Sbjct: 501 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFRGQLRSQ 560
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 561 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 619
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 620 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 647
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 889 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 948
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 949 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 986
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 38 PATPEEEGQIIRGWLERESRYGLQAGHNWFIISMQWWQQWKEYV 81
>gi|395845888|ref|XP_003795651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Otolemur
garnettii]
Length = 1604
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + S+T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPASRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP N D S ++ +D
Sbjct: 1279 IIHLKRFQFVSGRWIKSQ--KIVKFPRENFDPSAFLVPRD 1316
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|22550104|ref|NP_115971.2| ubiquitin carboxyl-terminal hydrolase 32 [Homo sapiens]
gi|47606649|sp|Q8NFA0.1|UBP32_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 32; AltName:
Full=Deubiquitinating enzyme 32; AltName: Full=Renal
carcinoma antigen NY-REN-60; AltName: Full=Ubiquitin
thioesterase 32; AltName:
Full=Ubiquitin-specific-processing protease 32; Flags:
Precursor
gi|22532405|gb|AAM97922.1| ubiquitin-specific protease USP32 [Homo sapiens]
gi|162317642|gb|AAI56265.1| Ubiquitin specific peptidase 32 [synthetic construct]
Length = 1604
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHKLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQAGHNWFIISMQWWQQWKEYV 411
>gi|355568599|gb|EHH24880.1| hypothetical protein EGK_08611 [Macaca mulatta]
gi|380817282|gb|AFE80515.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
gi|383408239|gb|AFH27333.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
Length = 1604
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKQTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|157820169|ref|NP_001100502.1| ubiquitin carboxyl-terminal hydrolase 32 [Rattus norvegicus]
gi|149053721|gb|EDM05538.1| ubiquitin specific protease 32 (predicted) [Rattus norvegicus]
Length = 1431
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 346 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGSNL 405
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 406 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 465
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 466 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 515
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 516 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 541
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 542 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 597
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 598 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 657
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 658 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 717
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 718 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 776
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +L AEV++ I F
Sbjct: 777 KKQLSDLCGLK-SEQILFAEVHSSNIKNF 804
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1046 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1105
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1106 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1143
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 195 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 238
>gi|402899881|ref|XP_003912913.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Papio anubis]
Length = 1604
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|387539806|gb|AFJ70530.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
Length = 1604
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKQTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|114669727|ref|XP_001142267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 2 [Pan
troglodytes]
gi|410262322|gb|JAA19127.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410262324|gb|JAA19128.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294718|gb|JAA25959.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294720|gb|JAA25960.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294722|gb|JAA25961.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342839|gb|JAA40366.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342841|gb|JAA40367.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342843|gb|JAA40368.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342845|gb|JAA40369.1| ubiquitin specific peptidase 32 [Pan troglodytes]
Length = 1604
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRAPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHKLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQAGHNWFIISMQWWQQWKEYV 411
>gi|148683809|gb|EDL15756.1| mCG11277 [Mus musculus]
Length = 1472
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 387 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGSNL 446
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 447 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 506
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 507 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 556
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 557 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 582
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 583 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 638
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 639 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 698
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 699 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 758
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 759 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 817
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +L AEV++ I F
Sbjct: 818 KKQLSDLCGLK-SEQILFAEVHSSNIKNF 845
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1087 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1146
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1147 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1184
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 236 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 279
>gi|126032299|ref|NP_001025105.1| ubiquitin specific protease 32 [Mus musculus]
gi|162317806|gb|AAI56266.1| Ubiquitin specific peptidase 32 [synthetic construct]
Length = 1604
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGSNL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +L AEV++ I F
Sbjct: 950 KKQLSDLCGLK-SEQILFAEVHSSNIKNF 977
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|432895001|ref|XP_004076037.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Oryzias
latipes]
Length = 1581
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 268/527 (50%), Gaps = 81/527 (15%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYV 123
+N F + + S A+RPG IDN ++ + + EG L+ L G+D+
Sbjct: 501 NNQCFSGANGHIPSQLAAQRPGAIDNQPLVTTEPMKAPTLTMEGGRLKRCLQLLPGRDFE 560
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEV---FXLCLKLIDSRDNSQTVIRL 180
VP+ VW L+ WY +LPR +I E +E+ + L L+ + + Q+ I +
Sbjct: 561 TVPEPVWRALYHWYGANISLPRPVILETKTGLAELELYPRYLLFLRQQPATRSPQSNIWV 620
Query: 181 ----------------------SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
S+ A+ + ++ + + I++E R+W Y N + +
Sbjct: 621 NMGNVPSPNAPLKRMLAYTGCFSRMATIKDIHLYLSQRLRIKEEDMRLWLY-NSENYLTL 679
Query: 219 LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSN 278
LD D TL++ + +Q +++EV+ D++ P E S
Sbjct: 680 LDDEDHTLENLKIYDEQQLVIEVR----------NKDMSW-PEEMS-------------- 714
Query: 279 GHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCL 338
F+ D + + GL+ NLGNTCFMNS++QC+
Sbjct: 715 -------------------FIANSSKIDRHKVPTEKGATGLS---NLGNTCFMNSSIQCV 752
Query: 339 VHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLA 397
+T L YF+ G + E+N NP+GM G +A +GDL+ +LWS + VAP + +A
Sbjct: 753 SNTKPLTDYFISGRHLYELNRTNPIGMRGHMAKCYGDLVMELWSGTQKNVAPLKLRWTIA 812
Query: 398 RFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA+E W+NH
Sbjct: 813 KYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVASEAWENHL 872
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
RN S+IVD+F GQ KS + C C +S FDPF +L+LPLP + + +TV +GS
Sbjct: 873 RRNRSIIVDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPMDSSMHLEITVIKLDGS- 931
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
P+ + + L L LS C LK E +LLAEV++ I F
Sbjct: 932 TPVRYGLRLNMDEKYTGLKKQLSELCSLK-PEQILLAEVHSSNIKNF 977
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E ISL SCL AF +EE LG D+++YC +CK HR ATKKLDLW LP +L+ HLKRF
Sbjct: 1222 RRAQAEPISLDSCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF 1281
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY 850
+ R++K++ V FP N D S ++ +D E +
Sbjct: 1282 QFVNGRWIKSQ--KIVKFPRENFDPSAFLAPRDLEQH 1316
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 11/80 (13%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERY-------VCGDEPSIDN 70
P TP+EE QI++ L+ +S L++G +FLIST W+++W+ Y + ++PSI +
Sbjct: 368 PATPEEEGQIIRGWLERESRHGLQQGQNWFLISTFWWQTWKDYAKYEQKGIVVEQPSILS 427
Query: 71 ISFDSPHMNGVSSKRAERPG 90
SF SP ++ + ERPG
Sbjct: 428 -SFRSPM--ATATVQPERPG 444
>gi|301776002|ref|XP_002923425.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Ailuropoda
melanoleuca]
Length = 1653
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 256/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 568 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 627
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 628 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 687
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 688 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 737
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 738 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 763
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 764 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 819
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP +A++AP+F+G+ Q DSQELL
Sbjct: 820 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLPWTIAKYAPRFNGFQQQDSQELL 879
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 880 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 939
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 940 VRCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 998
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C LK E +LLAEV+ I F
Sbjct: 999 KKQLSDLCGLK-SEQILLAEVHGSNIKNF 1026
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1268 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1327
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1328 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1365
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 416 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 459
>gi|312082391|ref|XP_003143425.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1131
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 249/933 (26%), Positives = 405/933 (43%), Gaps = 146/933 (15%)
Query: 3 IRDSSVLMMENGGSCL---PCTPDEERQIVQDLKNQSDLD-LKEGNLYFLISTRWYRSWE 58
+ D ++++ G CL PC+ + E +V K + LD E N+ +S+ W+R W
Sbjct: 249 VNDLLEIIVQIGHICLGLHPCSAEVELTVVCGFKQRVQLDAFAEWNI---VSSEWWRQWV 305
Query: 59 RYVCGDE--PSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNL 116
+ + P I+N S + S + + S+EG L +NL
Sbjct: 306 HALMSNSKVPPINNASIITVKQKNDWSYKVP--------------SLSNEGAPLA--QNL 349
Query: 117 EEGQDYVLVPQQVWEKLFCWY----KGGPALPRKMISEGIVNEKR-------VEVFXLCL 165
+D+ + +W+ L W+ + G +L R+++ IV+ +E++ L L
Sbjct: 350 VLNKDFEALAPCLWKALLRWHGSAAREGISLQRRILPARIVDPAAANSTGSIIELYPLTL 409
Query: 166 KLIDSRDNS----QTVIRLSKKASTRQL------YEKVCKLRGI-----------EQEKA 204
++ S + +K++S R+L ++C + + + E A
Sbjct: 410 LILRHSTASGGWLHSAFEWNKESSLRRLPWCVVSESRICTIEELLELLAHQLHISDVESA 469
Query: 205 RIWDY-FNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEP 263
R+W + LD TL+D +Q +LLE++ D++ P E
Sbjct: 470 RLWAVEIDGSPCKRLLDNDSVTLNDLKIQQSAQLLLELR----------NADMSW-PEEV 518
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
S L + + GY D+ SY G+ GL
Sbjct: 519 S----------CLESSNAEGY---------------TADNSDSSYIL-------GITGLY 546
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSS 382
N+GNTC+MNSALQCL +T L YF+ G + D++ L G +A + +++++LWS
Sbjct: 547 NMGNTCYMNSALQCLSNTRPLTNYFIEGRHKDDMKG---LKSTGVVATEYANVVKELWSG 603
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
+ +AP + + P F+ +QHD QE L+ LLD LHEDLN+++ KP+IE+ DS G
Sbjct: 604 KKRNIAPIKLRDAIRCAGPVFADRSQHDCQEFLSILLDLLHEDLNQIENKPFIELSDSDG 663
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD VA E W H R S+IVD+F GQ +STL C C+ +S FD F L LP+P
Sbjct: 664 RPDSVVAKEAWDAHLKREKSIIVDLFTGQLRSTLTCLNCNAISCRFDAFTCLQLPIPIDQ 723
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
++V V +G +P+ + L + L+ A L + +L Q+
Sbjct: 724 LLLISVVVVKRDGQ-IPIRYAFRLSHDTTIGMFKMKLTEASSLLPNSFQILCLNRAGQMM 782
Query: 563 RFFENPAELISSIKDDEHIVA--------YRFDR-KQGGKIKLEIVNRWQEKSASDYLKG 613
+ SI DD+ + Y F+ + + E + YL G
Sbjct: 783 QGVN------ESIGDDKSPITIYPNDALLYAFELPAEEDQSNPECFVAAPTQYNDSYLLG 836
Query: 614 SER----KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEV 669
+ R ++FG PL+ +G + V L+S + ++ K +E +
Sbjct: 837 ATRGCTARVFGVPLILRFTPGKTTGNKLYEEVWLLVSRFLKNGTAGKQQRTREANRAIDA 896
Query: 670 IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP---IQKDSILKPGKHIKVL 726
+++ N + DLC +LSF+ + C+ + D I++ + V
Sbjct: 897 AEDIRNGYP--------FDLCCVKLSFEWCSKCAWPAFCRGCVILSNDEIIE-DNLMAVA 947
Query: 727 LDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYC 786
+DW L ++ L + + SL SCL+ F+ E L DD C
Sbjct: 948 IDWKPTALYLRYQHSVELLCRDDGSVLQAWEVHYRPCSLLSCLNDFMQAERL--DDEIMC 1005
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRF----SYSRYLKNKLDTFVNFPILNLDLSKYM 842
C + TK L +W LP +L+ H KRF S RY+K+ V+FP+ NLDL +++
Sbjct: 1006 KPCGKKCPTTKALAIWRLPKILIVHFKRFVCVKSERRYMKSC--KVVDFPLENLDLREWL 1063
Query: 843 KSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ D S Y FAI+NHYG + GHY AYAK
Sbjct: 1064 RDPDIKTSTKYSCFAIANHYGAMASGHYVAYAK 1096
>gi|414883588|tpg|DAA59602.1| TPA: hypothetical protein ZEAMMB73_544083 [Zea mays]
Length = 449
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 236/417 (56%), Gaps = 44/417 (10%)
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
MYL+LP+PST R MTVTVF +GS P + V++ K G DL+ ALS C L DE L
Sbjct: 1 MYLSLPVPSTAKRVMTVTVFSTDGSREPCSYDVSVPKFGTLSDLVQALSIVCLLGDDEIL 60
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYL 611
L+ EVYN+ I R+ E P++ +S ++D + + AYR ++ + ++ + +SD
Sbjct: 61 LVTEVYNNCIIRYLEEPSDSVSLLRDGDKLAAYRLPKRHEKSPLVVFTHQHFVQHSSDGN 120
Query: 612 KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVID 671
+ + F APL+ L EE +SG + KLLSP + + ++ + E+ + +D
Sbjct: 121 LTPQMREFEAPLLAALPEE-ISGLSLQDIYLKLLSPFQLSNGASSLNDCMESN--SDSVD 177
Query: 672 ELSNSHNESVETAELED-----LCSR-----------------------ELSFQLSLTDE 703
S+S + + + ++LED CS + F+ L E
Sbjct: 178 TPSDSGSINFQNSQLEDGPESNHCSASECEVTKGPDDLYDGVSGSNKEAHMDFEFYLKSE 237
Query: 704 RISSCKPIQKDSI--------LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTV 755
R + QK I P + + V + W + Y S + +LP +HK
Sbjct: 238 RGEGQQ--QKIEINELHLLLETAPSR-LHVNVHWLQNASRKYATSMLNNLPEIHKLELIP 294
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
K T +++++L CL+AFL EEPLGP+DMWYCP+CK+H+QA KKLDLW LP+VLV HLKRF
Sbjct: 295 KGT-EDSVALHGCLEAFLKEEPLGPEDMWYCPRCKKHQQAMKKLDLWRLPEVLVIHLKRF 353
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTA 871
SY+++ +NKL+TFV+FP ++LDLS Y+ K + S Y L+A+SNHYG +GGGHYTA
Sbjct: 354 SYTQFTRNKLETFVDFPTVDLDLSSYVADKSEQPSSHYRLYAVSNHYGNMGGGHYTA 410
>gi|296201917|ref|XP_002748235.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Callithrix
jacchus]
Length = 1604
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 257/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 688
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 689 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + EKG GL NLGNTCFMNS++QC+ +T L +YF+ G + E
Sbjct: 715 -FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQPLTRYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VRCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1219 HESVEQSRRAQAEPINLDSCLRAFTNEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1278
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1279 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1316
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYV 411
>gi|301608620|ref|XP_002933869.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Xenopus
(Silurana) tropicalis]
Length = 1597
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 262/531 (49%), Gaps = 89/531 (16%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYV 123
+N S + N + ++PG IDN ++ + EG L+ +L G+DY
Sbjct: 497 NNQCMLSANGNALLQLNPQKPGAIDNQPLVTQETVKVPSLTLEGGRLKQSPSLLRGKDYE 556
Query: 124 LVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---- 179
+VP+ VW L+ WY +LPR +I + +E+F L + Q V R
Sbjct: 557 IVPEPVWRALYHWYGANLSLPRPVIKNCKTDLPELELFPRYLLFL----RQQPVTRQQQS 612
Query: 180 -------------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ + ++++E + + I++E R+W Y N +
Sbjct: 613 NIWVNMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSEN 671
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
+ LD D TL+ L++Q + + ++ D++ P E S
Sbjct: 672 YLTLLDDEDHTLEG----------LKIQDEQHLVIEVRNKDMSW-PEEMS---------- 710
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
F+ D + K + G GL NLGNTCFMNS+
Sbjct: 711 -----------------------FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSS 744
Query: 335 LQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
+QC+ +T L +YF+ G + E+N NP+GM G +A +GDL+++LWS + VAP +
Sbjct: 745 IQCVSNTQPLTKYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLR 804
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV KPY+E+KDS GRPD EVA E W
Sbjct: 805 WTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHDKPYVELKDSDGRPDWEVAAEAW 864
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
NH RN S++VD+F GQ +S + C C +S+ FDPF +L+LPLP + +TV
Sbjct: 865 DNHLRRNKSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKL 924
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
+G+ P+ + + L L LS C LK E +LLAEV+ I F
Sbjct: 925 DGT-TPVRYGLRLNMDEKYTGLKKQLSDLCGLK-PEQILLAEVHGSNIKNF 973
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF +EE LG D+M+
Sbjct: 1191 IAVDWDPTALHLRYQTSQERIVEEHESVEQSRRAQAEPINLDSCLRAFTSEEELGEDEMY 1250
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP N D S ++
Sbjct: 1251 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRENFDPSAFL 1308
Query: 843 KSKDGESYVYDLFAISN 859
K Y + N
Sbjct: 1309 VPKGPIQYQKKQMVLQN 1325
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +FLIS +W++ W+ YV
Sbjct: 369 PATPEEEGQIIRGWLERESRYGLQFGHNWFLISMQWWQQWKEYV 412
>gi|58269838|ref|XP_572075.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus neoformans
var. neoformans JEC21]
gi|57228311|gb|AAW44768.1| ubiquitin carboxyl-terminal hydrolase 12, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1490
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 236/456 (51%), Gaps = 56/456 (12%)
Query: 103 GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK--GGPALPRKMISEGIVNEKRVEV 160
G ++ +D+ + EE +DYV VP+ W+K+ W+ GP+LPR V +E+
Sbjct: 265 GKAKKEDVWALGDAEENEDYVFVPETGWQKVLEWFGPYDGPSLPRY-----CVPPDNIEI 319
Query: 161 FXLCLKLI-----------DSRDNSQTVIRLSKKASTRQLYEK----VC-------KLRG 198
L+L D S + L+ + + +E VC KL G
Sbjct: 320 IPANLRLFIVLPADAITTAGQPDESIQSVLLAPSTTPIKTFESFAVSVCNQEIDRSKLAG 379
Query: 199 IEQEKARIWDYFNKQRS------TSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
Q R+W + + L+++ + L Q+ E + I S
Sbjct: 380 --QWATRLWKIEKSGENDESLLKSGSLEITPKALISTKCQLIDTSSAEENLAEAILGSSK 437
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYP-----------GSSFGSTFMDM 301
+A+ + S T ++N + N+ P S
Sbjct: 438 SQIIAIEFGKIPEGSSTPVWNVEVNNDKQAVEKSNKPPPLFSKPAFFSGSGKAASESAST 497
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTEN 360
D + + ++ + GL GLQNLGNTCFMNSA+QCL +T +L+QYFL G Y++E+N +N
Sbjct: 498 TDAIQTRSQTRERKGKGLVGLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTEELNRDN 557
Query: 361 PLGMHGELALAFGDLLRKLW---SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
PLGM G++A AFG ++ LW SS ++ +PR K +RFAPQF+GY QHD+QE +AF
Sbjct: 558 PLGMQGQIAEAFGQVVENLWAPTSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAF 617
Query: 418 LLDGLHEDLNRVKQKPYIEMKD--SGGRPDE--EVANECWKNHKARNDSLIVDVFQGQYK 473
LLDGLHEDLNR+ +KPYIE D GG E E+ ECW +K RNDS+IVD+FQGQ K
Sbjct: 618 LLDGLHEDLNRILKKPYIEKPDWKPGGGDKELAELGKECWDGYKKRNDSVIVDLFQGQLK 677
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
STLVCP C K SITFDPFMYLT+PLP R +T
Sbjct: 678 STLVCPECHKESITFDPFMYLTVPLPIAQNRQFKIT 713
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 135/273 (49%), Gaps = 48/273 (17%)
Query: 631 HLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLC 690
HL DI + SK S L AK H L I + N N S + L D
Sbjct: 1012 HLYDKDI-TSASKSWSLLESRKKKAKKHIVNR---LASGISSMVNPSNNSDDEV-LSDGS 1066
Query: 691 SRELSFQLSLTDERISSCKPIQKDSILKPGKHI------KVLLDWTDDV---HELYDPSY 741
+ +L E++++ K ++PG+ I +W +D ++ DP+
Sbjct: 1067 TSTSPNKLEKMKEKLTNSK-----LAVRPGEGIFCEWSGADFAEWLNDNVKGEDVIDPAI 1121
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
K+L VKK + I + CLD F EE LG DD+WYCP CK+H+ ATKKL++
Sbjct: 1122 SKEL---------VKKREGKHIGIEDCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEI 1172
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL---------SKYMK--------- 843
+ PD+LV +KRF SR + +KLD V+FPI LDL +K +K
Sbjct: 1173 YKAPDILVICIKRFGSSRRMGDKLDNLVHFPIDGLDLEDRIGERQVAKTLKLNGEDVEGY 1232
Query: 844 --SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
DGE +YDL+A+ NH+GG+GGGHYTA+ +
Sbjct: 1233 GIEDDGEPLLYDLYAVDNHFGGMGGGHYTAFCR 1265
>gi|393907263|gb|EFO20645.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1143
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 253/947 (26%), Positives = 406/947 (42%), Gaps = 166/947 (17%)
Query: 3 IRDSSVLMMENGGSCL---PCTPDEERQIVQDLKNQSDLD-LKEGNLYFLISTRWYRSWE 58
+ D ++++ G CL PC+ + E +V K + LD E N+ +S+ W+R W
Sbjct: 253 VNDLLEIIVQIGHICLGLHPCSAEVELTVVCGFKQRVQLDAFAEWNI---VSSEWWRQWV 309
Query: 59 RYVCGDE--PSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNL 116
+ + P I+N S + S + + S+EG L +NL
Sbjct: 310 HALMSNSKVPPINNASIITVKQKNDWSYKVP--------------SLSNEGAPLA--QNL 353
Query: 117 EEGQDYVLVPQQVWEKLFCWY----KGGPALPRKMISEGIVNEKR-------VEVFXLCL 165
+D+ + +W+ L W+ + G +L R+++ IV+ +E++ L L
Sbjct: 354 VLNKDFEALAPCLWKALLRWHGSAAREGISLQRRILPARIVDPAAANSTGSIIELYPLTL 413
Query: 166 KLIDSRDNS----QTVIRLSKKASTRQL------YEKVCKLRGI-----------EQEKA 204
++ S + +K++S R+L ++C + + + E A
Sbjct: 414 LILRHSTASGGWLHSAFEWNKESSLRRLPWCVVSESRICTIEELLELLAHQLHISDVESA 473
Query: 205 RIWDY-FNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEP 263
R+W + LD TL+D +Q +LLE++ D++ P E
Sbjct: 474 RLWAVEIDGSPCKRLLDNDSVTLNDLKIQQSAQLLLELR----------NADMSW-PEEV 522
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQ 323
S L + + GY D+ SY G+ GL
Sbjct: 523 S----------CLESSNAEGY---------------TADNSDSSYIL-------GITGLY 550
Query: 324 NLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSS 382
N+GNTC+MNSALQCL +T L YF+ G + D++ L G +A + +++++LWS
Sbjct: 551 NMGNTCYMNSALQCLSNTRPLTNYFIEGRHKDDMKG---LKSTGVVATEYANVVKELWSG 607
Query: 383 GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG 442
+ +AP + + P F+ +QHD QE L+ LLD LHEDLN+++ KP+IE+ DS G
Sbjct: 608 KKRNIAPIKLRDAIRCAGPVFADRSQHDCQEFLSILLDLLHEDLNQIENKPFIELSDSDG 667
Query: 443 RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
RPD VA E W H R S+IVD+F GQ +STL C C+ +S FD F L LP+P
Sbjct: 668 RPDSVVAKEAWDAHLKREKSIIVDLFTGQLRSTLTCLNCNAISCRFDAFTCLQLPIPIDQ 727
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA-------- 554
++V V +G +P+ + L + L+ A L + +L
Sbjct: 728 LLLISVVVVKRDGQ-IPIRYAFRLSHDTTIGMFKMKLTEASSLLPNSFQILCLNRAGQMM 786
Query: 555 --------------EVY-NHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIV 599
+Y N + FE PAE S + E VA I
Sbjct: 787 QGVNESIGDDKSPITIYPNDALLYAFELPAEEDQS--NPECFVA----------APTVIA 834
Query: 600 NRWQEKSASDYLKGSER----KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA 655
+ + YL G+ R ++FG PL+ +G + V L+S + ++
Sbjct: 835 AHRKMQYNDSYLLGATRGCTARVFGVPLILRFTPGKTTGNKLYEEVWLLVSRFLKNGTAG 894
Query: 656 KAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP---IQ 712
K +E + +++ N + DLC +LSF+ + C+ +
Sbjct: 895 KQQRTREANRAIDAAEDIRNGYP--------FDLCCVKLSFEWCSKCAWPAFCRGCVILS 946
Query: 713 KDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAF 772
D I++ + V +DW L ++ L + + SL SCL+ F
Sbjct: 947 NDEIIEDNL-MAVAIDWKPTALYLRYQHSVELLCRDDGSVLQAWEVHYRPCSLLSCLNDF 1005
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF----SYSRYLKNKLDTF 828
+ E L DD C C + TK L +W LP +L+ H KRF S RY+K+
Sbjct: 1006 MQAERL--DDEIMCKPCGKKCPTTKALAIWRLPKILIVHFKRFVCVKSERRYMKSC--KV 1061
Query: 829 VNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FP+ NLDL ++++ D S Y FAI+NHYG + GHY AYAK
Sbjct: 1062 VDFPLENLDLREWLRDPDIKTSTKYSCFAIANHYGAMASGHYVAYAK 1108
>gi|134113753|ref|XP_774461.1| hypothetical protein CNBG1070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257099|gb|EAL19814.1| hypothetical protein CNBG1070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1487
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 238/460 (51%), Gaps = 64/460 (13%)
Query: 103 GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK--GGPALPRKMISEGIVNEKRVEV 160
G ++ +D+ + EE +DYV VP+ W+K+ W+ GP+LPR V +E+
Sbjct: 265 GKAKKEDVWALGDAEENEDYVFVPETGWQKVLEWFGPYDGPSLPRY-----CVPPDNIEI 319
Query: 161 FXLCLKLI-----------DSRDNSQTVIRLSKKASTRQLYEK----VC-------KLRG 198
L+L D S + L+ + + +E VC KL G
Sbjct: 320 IPANLRLFIVLPADAITTAGQPDESIQSVLLAPSTTPIKTFESFAVSVCNQEIDRSKLAG 379
Query: 199 IEQEKARIWDYFNKQRS------TSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
Q R+W + + L+++ + L Q+ E + I S
Sbjct: 380 --QWATRLWKIEKSGENDESLLKSGSLEITPKALISTKCQLIDTSSAEENLAEAILGSSK 437
Query: 253 GNDLAL---------------VPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
+A+ V + + ++ + PA + + S ST
Sbjct: 438 SQIIAIEFGKIPEGSSTPVWNVEVNNDKQAIEKSNKPAPLFSKPAFFSGSGKAASESAST 497
Query: 298 FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEI 356
D + + ++ + GL GLQNLGNTCFMNSA+QCL +T +L+QYFL G Y++E+
Sbjct: 498 ----TDAIQTRSQTRERKGKGLVGLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTEEL 553
Query: 357 NTENPLGMHGELALAFGDLLRKLW---SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQE 413
N +NPLGM G++A AFG ++ LW SS ++ +PR K +RFAPQF+GY QHD+QE
Sbjct: 554 NRDNPLGMQGQIAEAFGQVVENLWAPTSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQE 613
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKD--SGGRPDE--EVANECWKNHKARNDSLIVDVFQ 469
+AFLLDGLHEDLNR+ +KPYIE D GG E E+ ECW +K RNDS+IVD+FQ
Sbjct: 614 FIAFLLDGLHEDLNRILKKPYIEKPDWKPGGGDKELAELGKECWDGYKKRNDSVIVDLFQ 673
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
GQ KSTLVCP C K SITFDPFMYLT+PLP R +T
Sbjct: 674 GQLKSTLVCPECHKESITFDPFMYLTVPLPIAQNRQFKIT 713
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 50/274 (18%)
Query: 631 HLSGADIDIAVSKLLSPLRRTYSSAKAH-GGKENGFLPEVIDELSNSHNESVETAELEDL 689
HL DI + SK S L AK H + + +++ +NS +E +
Sbjct: 1012 HLYDKDI-TSASKSWSLLESRKKKAKKHIVNRLASGISSMVNPSNNSDDEVLSDGSTSTS 1070
Query: 690 CSRELSFQLSLTDERISSCKPIQKDSILKPGKHI------KVLLDWTDDV---HELYDPS 740
++ + LT+ R++ ++PG+ I +W +D ++ DP+
Sbjct: 1071 PNKLEKMKEKLTNSRLA----------VRPGEGIFCEWSGADFAEWLNDNVKGEDVIDPA 1120
Query: 741 YIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLD 800
K+L VKK + I + CLD F EE LG DD+WYCP CK+H+ ATKKL+
Sbjct: 1121 ISKEL---------VKKREGKHIGIEDCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLE 1171
Query: 801 LWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL---------SKYMK-------- 843
++ PD+LV +KRF SR + +KLD V+FPI LDL +K +K
Sbjct: 1172 IYKAPDILVICIKRFGSSRRMGDKLDNLVHFPIDGLDLEDRIGERQVAKTLKLNGEDVEG 1231
Query: 844 ---SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
DGE +YDL+A+ NH+GG+GGGHYTA+ +
Sbjct: 1232 YGIEDDGEPLLYDLYAVDNHFGGMGGGHYTAFCR 1265
>gi|417406639|gb|JAA49969.1| Putative ubiquitin carboxyl-terminal hydrolase 32 [Desmodus rotundus]
Length = 1619
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 266/534 (49%), Gaps = 95/534 (17%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 520 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 579
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQT------------VIRL--------- 180
ALPR +I +E+F L + + ++T +R+
Sbjct: 580 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGMMSLRMFPQHLPRGN 639
Query: 181 ------------------SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVS 222
S+ + ++++E + + I++E R+W Y N + + LD
Sbjct: 640 VPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDE 698
Query: 223 DQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTT 282
D L+ L++Q + + ++ D++ P E S
Sbjct: 699 DHRLE----------YLKIQDEQHLVIEVRNKDMSW-PEEMS------------------ 729
Query: 283 GYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTP 342
F+ D + EKG GL NLGNTCFMNS++QC+ +T
Sbjct: 730 ---------------FIANSSKIDRHKVPT--EKGA-TGLSNLGNTCFMNSSIQCVSNTQ 771
Query: 343 DLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAP 401
L QYF+ G + E+N NP+GM G +A +GDL+++LWS + +AP + +A++AP
Sbjct: 772 ALTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNIAPLKLRWTIAKYAP 831
Query: 402 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARND 461
+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN
Sbjct: 832 RFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNR 891
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S++VD+F GQ +S + C C +S+ FDPF +L+LPLP + +TV +G+ P+
Sbjct: 892 SIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVR 950
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ + L L LS C LK E +LLAEV+ I F ++ ++ SI
Sbjct: 951 YGLRLNMDEKYTGLKKQLSDLCGLK-SEQILLAEVHGSNIKNFPQDNQKVRLSI 1003
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 1234 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 1293
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 1294 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 1331
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKDYV 411
>gi|395749294|ref|XP_002827731.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Pongo abelii]
Length = 1105
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 258/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L +DY +VP+ VW L+ WY
Sbjct: 480 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHRRDYEMVPEPVWRALYHWYGANL 539
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 540 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 599
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+ +Q +Q
Sbjct: 600 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHKLEYLKIQDEQH 658
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
++ ++V N D++ P E S
Sbjct: 659 LV--IEVRN--------KDMSW-PEEMS-------------------------------- 675
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 676 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 731
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 732 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 791
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRP+ EVA E W NH RN S++VD+F GQ +S
Sbjct: 792 AFLLDGLHEDLNRVHEKPYVELKDSDGRPNWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 851
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 852 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIRLDGT-TPVRYGLRLNMDEKYTGL 910
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 911 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 938
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD 64
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV D
Sbjct: 329 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKEYVKYD 375
>gi|321260831|ref|XP_003195135.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus gattii
WM276]
gi|317461608|gb|ADV23348.1| Ubiquitin carboxyl-terminal hydrolase 12, putative [Cryptococcus
gattii WM276]
Length = 1416
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 252/469 (53%), Gaps = 48/469 (10%)
Query: 103 GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK--GGPALPRKMISEGIV-----NE 155
G ++ +D+ + EE +DYV VP+ W+K+ W+ GP+LPR + + N
Sbjct: 196 GKAKKEDVWALGDAEENEDYVFVPEAGWQKVLEWFGPYDGPSLPRYCVPPDNIEIIPGNL 255
Query: 156 KRVEVFXL-CLKLIDSRDNSQTVIRLSKKASTRQLYEK----VC-------KLRGIEQEK 203
+ VF + + D S + L+ + + +E VC KL G Q
Sbjct: 256 RLFIVFPADTIATTNQPDESIQSVLLAPSTTPIKTFESFAVSVCNQEIDPSKLAG--QWA 313
Query: 204 ARIWDYFNKQRSTSPL--DVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA-LVP 260
R+W + L S + A++ +++ + ++ G+ + +V
Sbjct: 314 TRLWKIEKSGENDESLLKSGSLEITPKALISTKCELIDTSNAEENLAEAILGSSKSQIVA 373
Query: 261 IE----PSRSSLTI------AGGPALSNGHTTGYRFNQ---YPGSSFGST-FMDMDDGYD 306
IE P SS + + A+ + F++ + GS +T D
Sbjct: 374 IEFGKIPEGSSTPVWNVEVNSDKQAIEKSNKPAPLFSKPAFFSGSGKAATESASTTDAIQ 433
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMH 365
+ + K+ + GL GLQNLGNTCFMNSA+QCL +T +L+QYFL G Y+DE+N +NPLGM
Sbjct: 434 TRSQTKERKGKGLVGLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTDELNRDNPLGMQ 493
Query: 366 GELALAFGDLLRKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
G++A AFG ++ LW+ S ++ +PR K +RFAPQF+GY QHD+QE +AFLLDGL
Sbjct: 494 GQIAEAFGQVVENLWAPSSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAFLLDGL 553
Query: 423 HEDLNRVKQKPYIEMKD--SGGRPDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
HEDLNR+ +KPYIE D GG E E+ ECW +K RNDS+IVD+FQGQ KSTLVC
Sbjct: 554 HEDLNRILKKPYIEKPDWKPGGGDKELAELGKECWDGYKKRNDSVIVDLFQGQLKSTLVC 613
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
P C K SITFDPFMYLT+PLP R VT F + P P V L+
Sbjct: 614 PECHKESITFDPFMYLTVPLPIAQNRQFKVT-FVPRDTEKP-PVNVKLL 660
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 133/273 (48%), Gaps = 48/273 (17%)
Query: 631 HLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLC 690
HL DI + S+ S L AK H L I + N N S + A L D
Sbjct: 942 HLYDKDI-TSASRSWSLLESRKKKAKKHIVNR---LASGISSMVNPSNNSEDEA-LSDAS 996
Query: 691 SRELSFQLSLTDERISSCKPIQKDSILKPGKHI------KVLLDWTDDV---HELYDPSY 741
+ ++ E++++ K +++PG+ I +W +D ++ DP+
Sbjct: 997 TATSPSKVEKKKEKLANSK-----LVVRPGEGIFCEWSGADFAEWLNDNVKGEDVIDPAI 1051
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
KDL KK + I + CLD F EE LG DD+WYCP CK+H+ ATKKL++
Sbjct: 1052 SKDL---------AKKREGKQIGIEDCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEI 1102
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL--------------------SKY 841
+ PD+LV +KRF SR + +KLD V+FPI LDL Y
Sbjct: 1103 YKAPDILVICIKRFGSSRRMGDKLDNLVHFPIDGLDLEDRIGERQVAKTLKLSGEDVEAY 1162
Query: 842 MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
DGE +YDL+A+ NH+GG+GGGHYTA+ +
Sbjct: 1163 GIEDDGEPLLYDLYAVDNHFGGMGGGHYTAFCR 1195
>gi|301107127|ref|XP_002902646.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262098520|gb|EEY56572.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 1492
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 285/561 (50%), Gaps = 69/561 (12%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE-----------PSI----- 68
E++IV+ ++ + G+ + L+ W+R W YV D P I
Sbjct: 390 EKRIVEWHWREATRVIGIGHTWNLVGADWWRKWCDYVSMDPKNGSPYGSLPVPLIPPTTV 449
Query: 69 --------DNISFDSPHMNG-VSSKRAERPGPIDN-SDIIQNGNGSSEGDDLEVRRNLEE 118
NI+ S +G SS R RPGPI N S ++Q+G+ +++ L
Sbjct: 450 VEVARNIRGNIALRSASYSGDGSSNRPPRPGPIANWSLLMQSGS-------RRLKQKLVL 502
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK--RVEVFXLCLKLIDSRDNSQT 176
+DY +P QV LF WY GGP L R ++ E ++E+F L L++ ++ +
Sbjct: 503 ARDYYTIPSQVNTVLFSWYSGGPDLVRSIVEVPTQTEPELQIELFPLVLRVARVDPSNGS 562
Query: 177 VIR------LSKKASTRQLYEKVCKLRGIEQ--EKARIWDYFNKQ--------RSTSPLD 220
VIR LS+ ++ L E C+ + + +KAR+W YFN + R P +
Sbjct: 563 VIRSGEEILLSELSTPASLLEATCRALLLLKLMDKARLW-YFNDKAPDYKIRLRDEYPDE 621
Query: 221 VSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGH 280
+ T D A+ +++ ++ G + + PS + I L G
Sbjct: 622 LKKLTQDTALANRHKEMAEWLKARPGAASRKRQREH-----RPSMRTSDICSRGNL--GE 674
Query: 281 TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG-----GLAGLQNLGNTCFMNSAL 335
G R PGS GS +++D S K+ KG GL GL NLGNTC+M+SAL
Sbjct: 675 ALGQRG---PGSEAGSPTIEVDPVLASPVVRKRFSKGAFKGPGLVGLDNLGNTCYMSSAL 731
Query: 336 QCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
QCL HT L +YF + Y +IN N G +G+L AFG+LLR LW+S R +AP FK
Sbjct: 732 QCLSHTRLLVEYFKNEAYLKDINLRNRDGTNGKLTAAFGELLRILWTSDRKRLAPNEFKK 791
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWK 454
LA+ PQF+G +QHD+QELLA LL L EDLNRV +KPY E DS GRPD VA E W+
Sbjct: 792 VLAKCNPQFAGSDQHDAQELLACLLSSLSEDLNRVVKKPYTEQPDSDGRPDALVAEEWWQ 851
Query: 455 NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN 514
NH+ R S+IV +F GQYKS L C VC S F+PF +L L LP + +R++ +T+ +
Sbjct: 852 NHQKREFSVIVALFTGQYKSLLECSVCRYESARFEPFTFLQLSLPESNSRSIVLTIIFCT 911
Query: 515 GSGLPMPFTVTLMKHGCCKDL 535
+P+ F+V + K +
Sbjct: 912 DR-VPLRFSVRVKNGDTVKKI 931
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 725 VLLDW-TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
V +DW + E YDP + ++ Q ++L C++ F +E + P+
Sbjct: 1192 VAIDWDIRTLKEEYDPIQASKMDFDASVQQHQRQDNQ-PLNLAHCMEIFTAKETI-PEA- 1248
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
YC CK R ATKK+DLW LP +LV HLKRF +++ + KL V+FP+ L ++
Sbjct: 1249 -YCGHCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQVSRRKLHHLVDFPLRGLQFGDFVA 1307
Query: 844 SK 845
K
Sbjct: 1308 RK 1309
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 842 MKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
++ DG ++YDL+A+ NH G LGGGHY AY
Sbjct: 1369 VRGDDG--FLYDLYAVVNHVGALGGGHYFAY 1397
>gi|47224929|emb|CAG06499.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1669
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 267/544 (49%), Gaps = 98/544 (18%)
Query: 69 DNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSS------EGDDLEVRRNLEEGQDY 122
+N F + + S A+RPG IDN ++ + EG L+ L G+D+
Sbjct: 516 NNQCFSGANGHLPSQLAAQRPGAIDNQSLVNTDPMKAAPTLTLEGGRLKRSLQLVPGRDF 575
Query: 123 VLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVF---XLCLKLIDSRDNSQTVIR 179
+P+ VW L+ WY +LPR +I + + +E+F L L+ + + Q+ I
Sbjct: 576 ETMPEPVWRALYHWYGANLSLPRPVILDSKTGQAELELFPRYLLFLRQQPATRSPQSNIW 635
Query: 180 LSKKASTRQLY------------------EKVCKLRG--------------------IEQ 201
++ +T +++ ++V G I++
Sbjct: 636 VNMGMTTMRMFPPYMIPPRGSVPSPNAPLKRVLAYTGCFSRVDTIKDIHLYLSQRLRIKE 695
Query: 202 EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPI 261
E R+W F + + LD D TL++ +Q +Q ++ ++V N D++ P
Sbjct: 696 EDMRLW-LFMSENYLTLLDDEDHTLENLKIQDEQQLV--IEVRN--------KDMSW-PE 743
Query: 262 EPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAG 321
E SF + MD K + G G
Sbjct: 744 E-----------------------------MSFIANSSKMD-------RHKVPTEKGATG 767
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCFMNS++QC+ +T L YFL G + E+N NP+GM G +A +GDL+ +LW
Sbjct: 768 LSNLGNTCFMNSSIQCVSNTKPLTDYFLSGRHLYELNRTNPIGMRGHMAKCYGDLVMELW 827
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
S + +VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS
Sbjct: 828 SGTQKSVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDS 887
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GRPD EVA+E W+NH RN S++VD+F GQ KS + C C +S FDPF +L+LPLP
Sbjct: 888 NGRPDWEVASEAWENHLRRNRSIVVDLFHGQLKSQVKCKTCGHISARFDPFNFLSLPLPM 947
Query: 501 TVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
+ +TV GS P+ + + L L LS C LK E +LL EV+
Sbjct: 948 DSYMHLEITVIKLEGS-TPVRYGLRLNMDEKYMGLKKQLSELCNLK-PEQILLTEVHTSN 1005
Query: 561 IFRF 564
I F
Sbjct: 1006 IKNF 1009
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ + E ISL SCL AF +EE LG D+++YC +CK HR ATKKLDLW LP +L+ HLKRF
Sbjct: 1285 RRAQAEPISLDSCLKAFTSEEELGEDELYYCSKCKTHRLATKKLDLWRLPPILIVHLKRF 1344
Query: 816 SY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
R++K++ V FP N D S ++ +D
Sbjct: 1345 QLVNGRWIKSQ--KIVKFPRENFDPSAFLAPRD 1375
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSI--DNISFDS 75
P TP+EE QI++ L+ +S L++G +FLIS W++ W+ YV + I + + S
Sbjct: 370 PGTPEEEGQIIRGWLERESRHGLQQGQNWFLISMLWWQQWKDYVKYEHKGIVSEQPTLLS 429
Query: 76 PHMNGVSSKRAERPGPID 93
N VS+ E P P D
Sbjct: 430 ALRNSVSASTVE-PMPPD 446
>gi|348681733|gb|EGZ21549.1| hypothetical protein PHYSODRAFT_299232 [Phytophthora sojae]
Length = 1696
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 284/553 (51%), Gaps = 77/553 (13%)
Query: 43 GNLYFLISTRWYRSWERYVCGDE-----------PSI-------------DNISFDSPHM 78
G + L+ W+R W YV D P I NI+ +
Sbjct: 472 GQTWNLVGAEWWRKWCDYVNMDPRNGSPYGSLPVPRIPPNTAVEMAQNIRGNIALRAARF 531
Query: 79 NGVS-SKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+G S + R RPGPI N ++ +GS +++ L DY ++P V+ LF WY
Sbjct: 532 SGDSGASRPPRPGPIANWGLLMQ-SGSRR-----LKQKLVLAHDYYMIPSPVYAVLFSWY 585
Query: 138 KGGPALPRKMISEGIVNEK--RVEVFXLCLKLIDSRDNSQTVIR------LSKKASTRQL 189
GGP L R ++ +E ++E+F L L++ + +V+R LS+ ++ L
Sbjct: 586 NGGPDLVRSIVEVPTKSEPELQLELFPLVLRVARVDPANGSVMRSGEEILLSELSTPASL 645
Query: 190 YEKVCKLRGIEQ--EKARIWDYFNKQRSTSPLDVSDQ-TLDDAMLQMDQDILLEVQVDNG 246
E C+ +++ +KAR+W YFN++ + + D+ L+ L D LLEVQ D+G
Sbjct: 646 LEATCRALLLQKLIDKARLW-YFNEKTPEHKIRLRDEYPLELRKLTQDSVFLLEVQDDDG 704
Query: 247 -ISMDSTGNDLALVPI-----EPSRSSLTI-----AGG----------PAL------SNG 279
+ T + + P +P++ + + AG P+L S G
Sbjct: 705 SWPLSQTSDTITSSPSSNGVRQPTQGNGNVNESDAAGASSRKRQLQHRPSLRTSDICSRG 764
Query: 280 HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG-----GLAGLQNLGNTCFMNSA 334
+ ++ PGS GS +++D S K+ K GL GL NLGNTC+M+SA
Sbjct: 765 NLGETLAHRDPGSDAGSPTIEVDPVLASPVVRKRFSKDAFTGPGLVGLDNLGNTCYMSSA 824
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQCL HT L +YF + Y +IN N G +G+L AFG+LLR LW+S R AP FK
Sbjct: 825 LQCLSHTRLLVEYFKNEAYLKDINLRNRDGTNGKLTAAFGELLRVLWTSDRKRFAPNEFK 884
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
LA+ PQF+G +QHD+QELLA LL L EDLNRV +KPY E DS GRPD VA E W
Sbjct: 885 KVLAKCNPQFAGSDQHDAQELLACLLSSLSEDLNRVVKKPYTEQPDSDGRPDALVAEEWW 944
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
+NH+ R S+IV +F GQYKS L C +C S F+PF +L L LP + +R++ +T+ +
Sbjct: 945 QNHQKREFSVIVALFTGQYKSLLECSICRYESARFEPFTFLQLSLPESSSRSIVLTIIFR 1004
Query: 514 NGSGLPMPFTVTL 526
+P+ F+V +
Sbjct: 1005 TDR-VPLRFSVRV 1016
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 32/266 (12%)
Query: 598 IVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKA 657
+V+R E+S + +LFGAPLV + + ++ + V K L RR ++ +
Sbjct: 1258 LVHRRVERSTDSFTNAHITRLFGAPLVIRVSLRVTTAYNLYVLVWKRL---RRIFNWQQP 1314
Query: 658 HGGKENGFLPEVIDELSNSH----NESVETAELEDLCSRELSFQLSLTDERISSCKPIQ- 712
P D + +H ++ A E L + F L L C +
Sbjct: 1315 PP-------PSYFDTKTQNHKRVRTDASSLALGEHLALTKFGFCLRLVTSHGIGCSRCEW 1367
Query: 713 ------------KDSILKPGKHIKVLLDW-TDDVHELYDPSYIKDLPVVHKTGFTVKKTR 759
+++ V +DW + E YDP + ++
Sbjct: 1368 LDGCLGCVLIPSAQTVIPLAAEETVAIDWDIRTLKEEYDPIQASKMDFDASVQQHQRQDN 1427
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
Q ++L C++ F +E + P+ YC CK R ATKK+DLW LP +LV HLKRF +++
Sbjct: 1428 Q-PLNLAHCMEMFTAKETI-PEA--YCGHCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQ 1483
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSK 845
+ KL V+FP+ L ++ K
Sbjct: 1484 VSRRKLHHLVDFPLKGLQFDDFVARK 1509
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 829 VNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
V+ +L+ S + + ++YDL+A+ NH G LGGGHY AY
Sbjct: 1558 VSSSVLDAPASATAAVRGDDGFLYDLYAVVNHVGALGGGHYFAY 1601
>gi|5360127|gb|AAD42882.1|AF155116_1 NY-REN-60 antigen [Homo sapiens]
Length = 828
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 245/485 (50%), Gaps = 76/485 (15%)
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCL 165
EG L+ L G+DY +VP+ VW L+ WY ALPR +I + +E+F L
Sbjct: 8 EGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANLALPRPVIKNSKTDIPELELFPRYL 67
Query: 166 KLIDSRDNSQTVIR-------------------------LSKKASTRQLYEKVCKLRGIE 200
+ + ++T S+ + ++++E + + I+
Sbjct: 68 LFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAYTGCFSRMQTIKEIHEYLSQRLRIK 127
Query: 201 QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP 260
+E R+W Y N + + LD D L+ L++Q + + ++ D++ P
Sbjct: 128 EEDMRLWLY-NSENYLTLLDDEDHKLE----------YLKIQDEQHLVIEVRNKDMSW-P 175
Query: 261 IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLA 320
E S F+ D + K + G
Sbjct: 176 EEMS---------------------------------FIANSSKIDRH---KVPTEKGAT 199
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+++L
Sbjct: 200 GLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQEL 259
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
WS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KD
Sbjct: 260 WSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKD 319
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
S GRPD EVA E W NH RN S++VD+F GQ +S + C C +S+ FDPF +L+LPLP
Sbjct: 320 SDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLP 379
Query: 500 STVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNH 559
+ +TV +G+ P+ + + L L LS C L E +LLAEV+
Sbjct: 380 MDSYMHLEITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLSDLCGLN-SEQILLAEVHGS 437
Query: 560 QIFRF 564
I F
Sbjct: 438 NIKNF 442
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 684 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 743
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 744 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 781
>gi|118398123|ref|XP_001031391.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89285719|gb|EAR83728.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1654
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 279/541 (51%), Gaps = 66/541 (12%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEP--SIDNISFDSPHMNGVSSKRAERPGPIDNSDII 98
K G +LI T+W W+ + E DN+ + + PGPID S+++
Sbjct: 173 KAGQEVYLIPTQWLNKWKEFSSYKEKFEQSDNMEDEEDSKKTIDQIY---PGPIDASNLV 229
Query: 99 Q--------NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISE 150
+ + N ++ ++ + E D+ +V +Q+ + L+ Y GG + R I
Sbjct: 230 ETYVKNHLIDANQDQFFENYVLKSDKAEKHDFEIVSKQIGDFLYEKY-GGFKVKRMTILN 288
Query: 151 GIVNEKRVEVFXLCLKLI-------DSRDNSQTVIRLSKKASTRQLYEKVCK-LRGIEQE 202
I NE VE+F + I D +++S I +SK AS +QL +K+ + L + Q+
Sbjct: 289 PITNEVNVELFFKKINFIPIPTLSPDQKEDSYYTIYISKFASLKQLNDKIKRSLEFLPQK 348
Query: 203 KARIWD--YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV-DNGISMDSTGNDLALV 259
K +I + YF + ++ L + Q + M Q ++ +++ V D I D +D+ L
Sbjct: 349 KNQILNRQYFKLWKLSTDLMKNYQNVYKTMAQKYREPTIQLDVKDIVIGEDECIDDMQLT 408
Query: 260 PIE------PSRSSLTIAGGPALSNG------HTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
E ++ I P + Y+ +S + +D D +
Sbjct: 409 DSEIILYELSETNNFKIVPCPQRKQSSKKESENKEDYQQQSINQNSQSTEIIDESDEIEG 468
Query: 308 YNTAK---------------------KGEKG-----GLAGLQNLGNTCFMNSALQCLVHT 341
+ T K G+KG GL GLQNLGNTCFMNSALQCL +
Sbjct: 469 FPTGKIKIRRIDESHVRNMMQKYRIQNGQKGFSGKKGLCGLQNLGNTCFMNSALQCLSNV 528
Query: 342 PDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
+L + + +Y +++N +NPLG +G LA+++ DL+R +W G ++V+P K + +FA
Sbjct: 529 EELTTFMVNNEYVNDLNPDNPLGANGHLAVSYADLVRDIWQGGDSSVSPHYLKKVIGKFA 588
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
PQF GY+Q DSQELL++LLDGLHEDLNR+K+KP +E D G D+E++ E +KN+K RN
Sbjct: 589 PQFYGYSQQDSQELLSYLLDGLHEDLNRIKKKPVVEAIDYSGGKDQEMSLEFFKNYKKRN 648
Query: 461 DSLIVDVFQGQYKSTLVCP--VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
DS+I D+ GQ+KSTLVCP C K+SITFDPF+ L++P+P ++ + + +
Sbjct: 649 DSVISDLMVGQFKSTLVCPDKNCGKISITFDPFLTLSVPIPRVTKEDVSFYIIFKDPRKT 708
Query: 519 P 519
P
Sbjct: 709 P 709
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 14/137 (10%)
Query: 752 GFTVKKTRQEAIS----LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
F +KT +E S L+ C+DAF+ +E L + WYC +CK H ATK+++++ P +
Sbjct: 997 NFESQKTSKEVSSGSADLYDCIDAFVKKEQLEKGNEWYCSKCKRHVLATKQMEIYNTPKI 1056
Query: 808 LVFHLKRF------SYSRYL----KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI 857
L+ HLKRF ++ RY K++ ++FPI NLD++KY+ +G+ +YDLFA+
Sbjct: 1057 LIIHLKRFKSGNVRNFGRYYFESGGKKINDLIDFPIENLDMTKYVLGSNGKPQIYDLFAV 1116
Query: 858 SNHYGGLGGGHYTAYAK 874
S HYGG+GGGHYTA A+
Sbjct: 1117 SQHYGGMGGGHYTACAQ 1133
>gi|343425268|emb|CBQ68804.1| related to UBP12-ubiquitin C-terminal hydrolase [Sporisorium
reilianum SRZ2]
Length = 1405
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/287 (49%), Positives = 184/287 (64%), Gaps = 12/287 (4%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAF 372
G GL GL NLGNTCFMNSALQCL +T +L QYF+ G Y +E+NT+NPLGM G +A AF
Sbjct: 507 GRSRGLRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKEELNTDNPLGMGGAIADAF 566
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G+L+ +W+ + PR FK L+RFAPQFSGY QHDSQELLAFLLDGLHEDLNR+ +K
Sbjct: 567 GNLISNIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKK 626
Query: 433 PYIEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
PYIE D G + ++ A W +KARNDS+IVD+FQGQY+STLVCP C KVSI FD
Sbjct: 627 PYIEAPDWEGGDERDLVAFAKRQWDIYKARNDSVIVDLFQGQYRSTLVCPDCGKVSIKFD 686
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PFMYLTLP+P+ V + S F V L L ++ ++
Sbjct: 687 PFMYLTLPIPNKKMWRGQVYFVPLDPSKPMHSFQVQLPAGTTVGKLRQKVAAQFGIETKR 746
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY------RFDRKQ 590
L+ EV++H+I+++ ++ LI IKD + + + RF R++
Sbjct: 747 -LVCGEVWHHRIYKWIDDYEPLI-DIKDGDFVYFFEVPTTPRFSRQR 791
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 37/157 (23%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
R + +S+ C+D F EE LG DD WYCP CKE RQATKK DLW PD+LV HLKRFS
Sbjct: 1111 ARPKTLSIEDCMDEFTREEQLGEDDPWYCPNCKEFRQATKKFDLWKAPDILVVHLKRFSA 1170
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS------------KDGESY--------------- 850
R+ ++KL+ V+FP+ LDL+ ++ + GE
Sbjct: 1171 GRHSRDKLNMLVDFPLEGLDLTDRVEGTQALRRVQEEAKESGEELSESMLGSGILRPLED 1230
Query: 851 ----------VYDLFAISNHYGGLGGGHYTAYAKVNA 877
+YDL+A+ NH+GGLGGGHYTA+AK A
Sbjct: 1231 NDDAVAVDRPIYDLYAVDNHFGGLGGGHYTAFAKSPA 1267
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 21/142 (14%)
Query: 29 VQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAER 88
++ +KN+ L G+ ++++ +WYR W+ C S + ++ AE
Sbjct: 204 IRPMKNRP---LHAGDTWYIVGRKWYRRWD-AAC------------SARRDSDPAENAEA 247
Query: 89 P-GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG-GPALPRK 146
P GPIDNSD++ + S +R + E DY ++P++ W L WY GP RK
Sbjct: 248 PIGPIDNSDLVDEESTPSFA---RLRPRINEHMDYEMLPEEGWNLLVSWYGSTGPLFARK 304
Query: 147 MISEGIVNEKRVEVFXLCLKLI 168
+I ++ VE + ++L+
Sbjct: 305 VIDGLSPGQESVEFYPPTIRLL 326
>gi|358057420|dbj|GAA96769.1| hypothetical protein E5Q_03440 [Mixia osmundae IAM 14324]
Length = 2025
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/278 (50%), Positives = 180/278 (64%), Gaps = 19/278 (6%)
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGE 367
+ A G GL GL NLGNTCFMNSALQCL +TP+L +YF G Y E+N +NPLGM+GE
Sbjct: 1220 HAASTGRSRGLTGLGNLGNTCFMNSALQCLSNTPELQRYFTSGAYKSELNPDNPLGMNGE 1279
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+A AFG L++++W+ G + PR FK + RF P F G+ Q DSQELLAFLLDGLHEDLN
Sbjct: 1280 VAEAFGQLMQRIWTGGSNSYTPREFKAMIGRFRPVFLGWQQQDSQELLAFLLDGLHEDLN 1339
Query: 428 RVKQKPYIEMKDSGGRPDEEVAN---ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
R+K+KPY+E D G DEE+ N W +K+RNDS+IVD+FQGQY S +VCP C+KV
Sbjct: 1340 RIKKKPYVEQPDWTGGDDEELMNLAKTSWDQYKSRNDSIIVDLFQGQYTSKVVCPDCAKV 1399
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH-----GCCKDLILAL 539
SITFDPFMYLTL LPS +T V++ +PM L+K G +
Sbjct: 1400 SITFDPFMYLTLQLPS---KTWIGHVYF-----VPMDPAKPLLKFMINMPGTTTISQIKA 1451
Query: 540 STACCLKID-EGLLLAEVYNHQIFRFFENPAELISSIK 576
A ID ++ EVYN + F+++ + E+I+ IK
Sbjct: 1452 YIAARTGIDARKMMSVEVYNRRFFKWWSD-DEVINDIK 1488
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 31/192 (16%)
Query: 712 QKDSILKPGKHIKVLLDWTDDVHELY----------DPSYIKDLPVVHKTGFTVKKTRQE 761
Q +I++ G H+ L+DW D+ ++ Y + + + L V++ + +
Sbjct: 1695 QGPTIVRTGDHL--LVDWDDEAYDAYFGDAPTPNLSETAQLNALFTVYQEPESGDADSKT 1752
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
+++ CL F E L D+ WYC +CK+H+QA KK+DLW PDVLV HLKRFS RY
Sbjct: 1753 GLTIDKCLKDFTRAEQLTEDNAWYCSRCKKHQQAEKKIDLWKTPDVLVIHLKRFSNVRYS 1812
Query: 822 KNKLDTFVNFPILNLDLSKY---------MKSKDGESY----------VYDLFAISNHYG 862
++K+ FV+FPI LDL ++ ++++ G Y +YDLFA+ NHYG
Sbjct: 1813 RDKITDFVDFPIEGLDLEQHVLGRKTAERLRAEKGADYAIDEALDEPLLYDLFAVDNHYG 1872
Query: 863 GLGGGHYTAYAK 874
G+GGGHYTAYA+
Sbjct: 1873 GMGGGHYTAYAQ 1884
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 2 TIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
TI S L G LP P++ R I Q LKN + L L G+ ++L++T WY++W+ +
Sbjct: 873 TISASRPLARAPAGVTLPSGPEQVRLINQ-LKNGTSLVL--GDAWYLVATPWYKTWQAHS 929
Query: 62 CG---DEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEE 118
G +E ++ + +G PGPI N+ + + G EG EE
Sbjct: 930 SGEASEEKGDEDWQMVAAGPDG--------PGPITNASLSLDARGRLEG-------TPEE 974
Query: 119 GQDYVLVPQQVWEKLFCWY 137
DY+ +P++ W+ L WY
Sbjct: 975 EVDYIPLPERAWQLLLDWY 993
>gi|328724652|ref|XP_003248212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like isoform 1
[Acyrthosiphon pisum]
Length = 1554
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 270/553 (48%), Gaps = 118/553 (21%)
Query: 74 DSPHMNGVSSKRAE--RPGPIDNSDIIQ---NGNGSSEGDDLEVRRN-LEEGQDYVLVPQ 127
+SP + + S++ +PGPI+NS ++ S G+ +++RN L G+D+ LVP
Sbjct: 490 ESPTQSPIMSRKVSLSKPGPINNSGLVSVPTTKVTSLTGEGGQLKRNMLLRGRDFQLVPN 549
Query: 128 QVWEKLFCWYKGGPALPRKMI-SEGIVNEKRVEVFXLCLKLIDSRD-------------- 172
+W+ L WY+G PALPR++I S E +E++ L L+L+ +
Sbjct: 550 SLWKALVQWYRGSPALPRQVIQSNRGSGETELELYPLNLRLLKHHNGTLSNGSGPNSNVA 609
Query: 173 ----------------------------------NSQTVIRLSKKASTRQL------YEK 192
NS L+ AS +L Y+
Sbjct: 610 RAPTPNTGSWSGLVGGYGAAALSSTGYNYVSNLVNSMPRRYLAYTASFSKLSTVKHVYDF 669
Query: 193 VCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+C ++ E R+W +F+ + + ++ DQTL++ + + I++E++ + +
Sbjct: 670 LCIRLKLKAEDMRLW-HFHDENNMVLIEDEDQTLEELGVCDEDQIIIEIRNKDLTWPEEI 728
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
G SL+I +G + Q P
Sbjct: 729 G-------------SLSI----------NSGDKCKQLPA--------------------- 744
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
EKG GL NLGNTCFMN+ALQC+ +T L QYF+ D + E+N NPLGM G +A
Sbjct: 745 --EKGA-TGLNNLGNTCFMNAALQCVSNTRLLTQYFINDMHLYELNRSNPLGMKGCIAKR 801
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+GDL+ ++W +AP + + ++AP+F+G+ QHDSQELLAFLLDGLHEDLNRV
Sbjct: 802 YGDLIHEIWRGTAKTIAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGLHEDLNRVHG 861
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPY E+ DS GRPD VA E W+NH RN S++VD+F GQ KS + C C S+ FDPF
Sbjct: 862 KPYSELTDSEGRPDVTVAEEAWENHIVRNKSIVVDLFHGQLKSKVTCKKCGHESVRFDPF 921
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM---KHGCCKDLILALSTACCLKID 548
YL+LPLP + V V +G+ +P+ + + + KH K + +LS
Sbjct: 922 NYLSLPLPMESYVCLQVIVIKLDGT-VPVKYGLRMNADDKHSVVKSKLSSLSGISA---- 976
Query: 549 EGLLLAEVYNHQI 561
L LAE+ QI
Sbjct: 977 NNLKLAEIIGAQI 989
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ E ISL SCL AF EE L + +YC C++H+ A+KKL +W LP +L+ HLKRF Y
Sbjct: 1280 SHTEPISLESCLAAFTKEEQLSEAEKYYCSTCQDHQLASKKLQIWRLPPILIVHLKRFQY 1339
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS 844
K V FP + D + Y+ S
Sbjct: 1340 LNGKWVKSHKVVKFPYKDFDPTDYLAS 1366
>gi|170579604|ref|XP_001894903.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia malayi]
gi|158598337|gb|EDP36250.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia malayi]
Length = 1137
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 252/939 (26%), Positives = 402/939 (42%), Gaps = 168/939 (17%)
Query: 9 LMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE--P 66
++++ G CL P Q VQ L + ++S+ W+R W + + P
Sbjct: 281 IIVQLGHICLGLHPSSAEQRVQ---------LDAFTEWNIVSSEWWRQWVHALMSNSKVP 331
Query: 67 SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVP 126
I+N S + S + + S+EG L +NL +D+ V
Sbjct: 332 PINNASIITVKQKNDWSYKVP--------------SLSNEGAPLA--QNLVINKDFEAVA 375
Query: 127 QQVWEKLFCWY----KGGPALPRKMISEGIVNEKRV-------EVFXLCLKLIDSRDNS- 174
+W+ L W+ + G +L R+++ IV+ V E++ L L ++ +
Sbjct: 376 PCLWKALLRWHGSAAREGISLQRRILPARIVDPTAVNSTKPIIELYPLTLLILRHGTATG 435
Query: 175 ---QTVIRLSKKASTRQL------YEKVCKLRGI-----------EQEKARIWDY-FNKQ 213
+ +K++S R+L ++C + + + E AR+W +
Sbjct: 436 GWLHSAFEWNKESSLRRLPWCVVSESRICTIEELLELLAHQLHISDVESARLWTVEIDGS 495
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
LD TL+D +Q +LLE++ D++ P E S
Sbjct: 496 PCKRLLDNDSVTLNDLKIQQSAQLLLELR----------NADMSW-PEEVS--------- 535
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
L + + GY D+ SY G+ GL N+GNTC+MNS
Sbjct: 536 -CLESSNAEGY---------------TTDNSDSSYIL-------GITGLYNMGNTCYMNS 572
Query: 334 ALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
ALQCL +T L YF+ G + D++ GM +A+ + +++++LWS + +AP
Sbjct: 573 ALQCLSNTRPLTNYFIEGRHKDDMKRLKSKGM---VAMEYANVVKELWSGKKRNIAPIKL 629
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
+ + P F+ +QHD QE L+ LLD LHEDLN+++ KP+IE+ DS GRPD VA E
Sbjct: 630 RDAIRCAGPVFAERSQHDCQEFLSILLDLLHEDLNQIENKPFIELNDSDGRPDSIVAKEA 689
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W H R+ S+IVD+F GQ +STL C C+ +S FD F L LP+P ++V V
Sbjct: 690 WDAHLKRDKSIIVDLFTGQLRSTLTCLNCNAISCRFDAFTCLQLPIPIDHLLLISVVVVK 749
Query: 513 ANGSGLPMPFTVTL----------MKHGCCKDLILALSTACCLK------------IDEG 550
+G +P+ + L MK L+ CL +D+
Sbjct: 750 RDGQ-IPIRYAFRLSCDTTIGMFKMKLANASGLLSNSFQILCLNRAGQMMQGVSESVDDD 808
Query: 551 LLLAEVY-NHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASD 609
VY N + FE PAE S + E VA I + +
Sbjct: 809 NSSINVYPNDALLYAFELPAEEDQS--NSECFVA----------APTVIAAHRKMQYNDS 856
Query: 610 YLKGSER----KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGF 665
YL G+ R ++FG PL+ +G + V +S + S+ K +E
Sbjct: 857 YLLGATRGCTARVFGVPLILRFTPGKTTGNKLYEEVWLHVSRFLKNGSAGKQQRTREANR 916
Query: 666 LPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP---IQKDSILKPGKH 722
+ +++ N + DLC +LSF+ + C+ + D I++
Sbjct: 917 AIDAAEDIRNGYPF--------DLCCVKLSFEWCSKCAWPAFCRGCVILSNDEIIEDNL- 967
Query: 723 IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+ V +DW L ++ L + + SL SCL+ F+ E L DD
Sbjct: 968 MAVAIDWKPTALYLRYQHSVELLCRDDGSVLQAWEVHYRPCSLVSCLNDFMQAERL--DD 1025
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF----SYSRYLKNKLDTFVNFPILNLDL 838
+ C C + TK L +W LP +L+ H KRF S R++K+ V+FP+ NLDL
Sbjct: 1026 VIMCKPCGKKCPTTKALAIWRLPKILIIHFKRFVCVKSERRWMKSC--KVVDFPLENLDL 1083
Query: 839 SKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAKVN 876
++++ D + S Y FAI+NHYG + GHY AYAK N
Sbjct: 1084 REWLRDPDVKTSTKYSCFAIANHYGAMASGHYVAYAKNN 1122
>gi|219124126|ref|XP_002182362.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406323|gb|EEC46263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 641
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/593 (31%), Positives = 283/593 (47%), Gaps = 85/593 (14%)
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSS- 382
L NTC++NS++QCL HTP +YF Y ++INT NPLG G LA L+ LW
Sbjct: 17 LRNTCYLNSSIQCLSHTPIFREYFTSKAYLNDINTTNPLGHQGHLAQVSAVLINSLWKQF 76
Query: 383 --------------------GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
++ P+ FK L +F F+G QHD+QELLAFLL GL
Sbjct: 77 NQTPQVPLRRVRAPGSYAMVNAPSLTPKTFKDSLGKFNDHFAGNEQHDAQELLAFLLGGL 136
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
EDLNR+ KPYIE DS GRPD E+A+ W NH R S+IV +F GQYKS L C C
Sbjct: 137 SEDLNRIMDKPYIEAPDSDGRPDHELADIWWTNHLKREMSIIVALFTGQYKSLLTCRSCK 196
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
S F+PF +L LPLP T+++ V+ + + V + G +D++LAL+
Sbjct: 197 YESARFEPFSFLQLPLPEDDQLTVSLVVYPLKDGTDTLKYCVRVNSDGKLRDVLLALAM- 255
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIK------- 595
LL E + ++P + + + D D G++
Sbjct: 256 --------LLYVEQNGKAVSPIEDSPLQGNAMTESD----GVSTDESSDGEVLFVKPRAS 303
Query: 596 -LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE-EHLSGADI-DIAVSKL--LSPLRR 650
L I R E + + L ++FG P++ + + + +G D+ D+ +++ + P +
Sbjct: 304 FLAIAQRRSELVSQNSLHPLAHRVFGTPILMRVNDLQTCTGRDLYDLIAARVRNVVPKQA 363
Query: 651 TYSSAKAHGGKENGFLPEVIDELSNS-HNESV--ETAELEDLCSREL---SFQLSLTDER 704
++ K+ L E EL+ + +SV T ++E++ + + F+L +T
Sbjct: 364 IRFLSEISSSKKTVNLKEQSVELTKTGKRQSVGRTTTDMEEVSAGPVPRYGFRLRITSRD 423
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAIS 764
C ++ W D P FT +I+
Sbjct: 424 GRRC----------------LICRWFDCCVGCLIPD---------DDEFTTGN-HAGSIT 457
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L CLDAF EE + P+ YC +CK+ R TK++ LW LP V++ LKRF ++++++ K
Sbjct: 458 LEQCLDAFAEEEKI-PEA--YCSRCKDFRVQTKRMSLWRLPPVVIIQLKRFQFTQHMRRK 514
Query: 825 LDTFVNFPILNLDLSKYMK--SKDGES-YVYDLFAISNHYGGLGGGHYTAYAK 874
L V FPI LDLS+ M S DG S +YDL+ + +H G L GGHY A K
Sbjct: 515 LRDLVVFPIEGLDLSRIMAPDSDDGRSEMLYDLYGVVHHQGALSGGHYVASLK 567
>gi|406696920|gb|EKD00191.1| ubiquitin carboxyl-terminal hydrolase 12 [Trichosporon asahii var.
asahii CBS 8904]
Length = 1329
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 232/457 (50%), Gaps = 80/457 (17%)
Query: 112 VRRNLEEGQDYVLVPQQVWEKLFCWYK---GGPALPRKMISEGIVNEKRVEVFXLCLKL- 167
+R L+E +D++ V WE L Y P LPR ++ +R+E+ +L
Sbjct: 185 LRDGLQEDEDFIYVGSMGWEALVKAYNYPADSPQLPRLCLAG-----ERIEIAPQTYRLH 239
Query: 168 -------IDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKA------RIWDYFNKQR 214
I + ST E +R + +K R+W + Q
Sbjct: 240 VVSTEPSIPVPPAAPPAPITITAPSTTTYSELKTFVRALFADKISVGAPLRLW-TLDTQE 298
Query: 215 STSPLDV---------------SDQTLDDAMLQMDQDILLEV-------QVDNGISMDST 252
S S L++ +D+TL D DI+LEV VD ++ D+
Sbjct: 299 SPSSLEIDAKDMPKLSAKMMSGNDKTLADGGFADGDDIVLEVSSSSSAGAVDWPLTADAN 358
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
GN A ++P + G PA +G N GSS S S + +
Sbjct: 359 GN--ATEKLQP------LFGKPAFYSG-------NSAAGSSTSSLAAFNKPQTRSQSRTR 403
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-------------GDYSDEINTE 359
G GL GL NLGNTCFM SA QCL +T LA YFL G Y +E+N +
Sbjct: 404 SGH--GLVGLNNLGNTCFMASATQCLSNTSVLADYFLCEFSLGALKLISAGVYREELNPD 461
Query: 360 NPLGMHGELALAFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPLGMHG++A AFG+ L LW+S ++ +PR K +RFAPQF+GY QHD+QE LAFL
Sbjct: 462 NPLGMHGQVAEAFGETLEALWTSPAHSSFSPRRLKSTCSRFAPQFAGYGQHDTQEFLAFL 521
Query: 419 LDGLHEDLNRVKQKPYIEMKD----SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LDGLHEDLNR+K+KPYIE D G R E+ ECW+ +K RNDS+IVD+FQGQ +S
Sbjct: 522 LDGLHEDLNRIKKKPYIEKPDWKPGGGDRELAELGKECWEGYKKRNDSVIVDLFQGQLQS 581
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
TLVCP C K SIT DPFMYLT+P+P T TRT F
Sbjct: 582 TLVCPECHKESITMDPFMYLTVPMPITQTRTFKCIYF 618
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 707 SCKPIQKDSILKPGKHIKVLLDWTDD-VHELYDPSYIKDL--------PVVHKTGFTVKK 757
S +P Q + ++PG+ + + W + E ++P + L P + K KK
Sbjct: 939 SKQPKQPAACVRPGEAL--FVQWKNSKFEEFFEPRREQLLRGLELVVDPAIAKDA--EKK 994
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
R AI+L CLD F EE LG DD+WYCP CK+H+ ATKKL+++ PD+LV +KRF
Sbjct: 995 GRGRAITLDDCLDEFSKEETLGQDDLWYCPVCKKHQPATKKLEIYKAPDILVICIKRFGS 1054
Query: 818 SRYLKNKLDTFVNFPILNLDLSK--------------------YMKSKDGESYVYDLFAI 857
+R L++KLD V+FP LDL + Y E ++YDL+A+
Sbjct: 1055 ARTLRDKLDHMVSFPNEGLDLDERIGERRITQSLHLTPEEAKHYGIEHSTEPFIYDLYAV 1114
Query: 858 SNHYGGLGGGHYTAYAK 874
NH+GGLGGGHYTA+ +
Sbjct: 1115 DNHFGGLGGGHYTAFCR 1131
>gi|328724654|ref|XP_003248213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like isoform 2
[Acyrthosiphon pisum]
Length = 1445
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 271/553 (49%), Gaps = 118/553 (21%)
Query: 74 DSPHMNGVSSKRAE--RPGPIDNSDIIQ---NGNGSSEGDDLEVRRN-LEEGQDYVLVPQ 127
+SP + + S++ +PGPI+NS ++ S G+ +++RN L G+D+ LVP
Sbjct: 490 ESPTQSPIMSRKVSLSKPGPINNSGLVSVPTTKVTSLTGEGGQLKRNMLLRGRDFQLVPN 549
Query: 128 QVWEKLFCWYKGGPALPRKMI-SEGIVNEKRVEVFXLCLKLIDSRD-------------- 172
+W+ L WY+G PALPR++I S E +E++ L L+L+ +
Sbjct: 550 SLWKALVQWYRGSPALPRQVIQSNRGSGETELELYPLNLRLLKHHNGTLSNGSGPNSNVA 609
Query: 173 ----------------------------------NSQTVIRLSKKASTRQL------YEK 192
NS L+ AS +L Y+
Sbjct: 610 RAPTPNTGSWSGLVGGYGAAALSSTGYNYVSNLVNSMPRRYLAYTASFSKLSTVKHVYDF 669
Query: 193 VCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+C ++ E R+W +F+ + + ++ DQTL++ + + I++E++ + +
Sbjct: 670 LCIRLKLKAEDMRLW-HFHDENNMVLIEDEDQTLEELGVCDEDQIIIEIRNKDLTWPEEI 728
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
G SL+I +G + Q P A+
Sbjct: 729 G-------------SLSI----------NSGDKCKQLP--------------------AE 745
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG GL NLGNTCFMN+ALQC+ +T L QYF+ D + E+N NPLGM G +A
Sbjct: 746 KGA----TGLNNLGNTCFMNAALQCVSNTRLLTQYFINDMHLYELNRSNPLGMKGCIAKR 801
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+GDL+ ++W +AP + + ++AP+F+G+ QHDSQELLAFLLDGLHEDLNRV
Sbjct: 802 YGDLIHEIWRGTAKTIAPLKLRWTIGKYAPRFNGFQQHDSQELLAFLLDGLHEDLNRVHG 861
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPY E+ DS GRPD VA E W+NH RN S++VD+F GQ KS + C C S+ FDPF
Sbjct: 862 KPYSELTDSEGRPDVTVAEEAWENHIVRNKSIVVDLFHGQLKSKVTCKKCGHESVRFDPF 921
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM---KHGCCKDLILALSTACCLKID 548
YL+LPLP + V V +G+ +P+ + + + KH K + +LS
Sbjct: 922 NYLSLPLPMESYVCLQVIVIKLDGT-VPVKYGLRMNADDKHSVVKSKLSSLSGISA---- 976
Query: 549 EGLLLAEVYNHQI 561
L LAE+ QI
Sbjct: 977 NNLKLAEIIGAQI 989
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ E ISL SCL AF EE L + +YC C++H+ A+KKL +W LP +L+ HLKRF Y
Sbjct: 1280 SHTEPISLESCLAAFTKEEQLSEAEKYYCSTCQDHQLASKKLQIWRLPPILIVHLKRFQY 1339
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS 844
K V FP + D + Y+ S
Sbjct: 1340 LNGKWVKSHKVVKFPYKDFDPTDYLAS 1366
>gi|401881283|gb|EJT45585.1| ubiquitin carboxyl-terminal hydrolase 12 [Trichosporon asahii var.
asahii CBS 2479]
Length = 1328
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 232/457 (50%), Gaps = 80/457 (17%)
Query: 112 VRRNLEEGQDYVLVPQQVWEKLFCWYK---GGPALPRKMISEGIVNEKRVEVFXLCLKL- 167
+R L+E +D++ V WE L Y P LPR ++ +R+E+ +L
Sbjct: 185 LRDGLQEDEDFIYVGSMGWEALVKAYNYPADSPQLPRLCLAG-----ERIEIAPQTYRLH 239
Query: 168 -------IDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKA------RIWDYFNKQR 214
I + ST E +R + +K R+W + Q
Sbjct: 240 VVSTEPSIPVPPAAPPAPITITAPSTTTYSELKTFVRALFADKISVGAPLRLW-TLDTQE 298
Query: 215 STSPLDV---------------SDQTLDDAMLQMDQDILLEV-------QVDNGISMDST 252
S S L++ +D+TL D DI+LEV VD ++ D+
Sbjct: 299 SPSSLEIDAKDMPKLSAKMMSGNDRTLADGGFADGDDIVLEVSSSSSAGAVDWPLTADAN 358
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
GN A ++P + G PA +G N GSS S S + +
Sbjct: 359 GN--ATEKLQP------LFGKPAFYSG-------NSAAGSSTSSLAAFNKPQTRSQSRTR 403
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-------------GDYSDEINTE 359
G GL GL NLGNTCFM SA QCL +T LA YFL G Y +E+N +
Sbjct: 404 SGH--GLVGLNNLGNTCFMASATQCLSNTSVLADYFLCEFSLGALKLISAGVYREELNPD 461
Query: 360 NPLGMHGELALAFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPLGMHG++A AFG+ L LW+S ++ +PR K +RFAPQF+GY QHD+QE LAFL
Sbjct: 462 NPLGMHGQVAEAFGETLEALWTSPAHSSFSPRRLKSTCSRFAPQFAGYGQHDTQEFLAFL 521
Query: 419 LDGLHEDLNRVKQKPYIEMKD----SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LDGLHEDLNR+K+KPYIE D G R E+ ECW+ +K RNDS+IVD+FQGQ +S
Sbjct: 522 LDGLHEDLNRIKKKPYIEKPDWKPGGGDRELAELGKECWEGYKKRNDSVIVDLFQGQLQS 581
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
TLVCP C K SIT DPFMYLT+P+P T TRT F
Sbjct: 582 TLVCPECHKESITMDPFMYLTVPMPITQTRTFKCIYF 618
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 33/197 (16%)
Query: 707 SCKPIQKDSILKPGKHIKVLLDWTDD-VHELYDPSYIKDL--------PVVHKTGFTVKK 757
S +P Q + ++PG+ + + W + E ++P + L P + K KK
Sbjct: 938 SKQPKQPAACVRPGEAL--FVQWKNSKFEEFFEPRREQLLRGLELVVDPAIAKDA--EKK 993
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
R AI+L CLD F EE LG DD+WYCP CK+H+ ATKKL+++ PD+LV +KRF
Sbjct: 994 GRGRAITLDDCLDEFSKEETLGQDDLWYCPVCKKHQPATKKLEIYKAPDILVICIKRFGS 1053
Query: 818 SRYLKNKLDTFVNFPILNLDLSK--------------------YMKSKDGESYVYDLFAI 857
+R L++KLD V+FP LDL + Y E ++YDL+A+
Sbjct: 1054 ARTLRDKLDHMVSFPNEGLDLDERIGERRITQSLHLTPEEAKHYGIEHSTEPFIYDLYAV 1113
Query: 858 SNHYGGLGGGHYTAYAK 874
NH+GGLGGGHYTA+ +
Sbjct: 1114 DNHFGGLGGGHYTAFCR 1130
>gi|388855753|emb|CCF50741.1| related to UBP12-ubiquitin C-terminal hydrolase [Ustilago hordei]
Length = 1422
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 179/272 (65%), Gaps = 6/272 (2%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAF 372
G GL GL NLGNTCFMNSALQCL +T +L QYF+ G Y E+NT+NPLGM G +A AF
Sbjct: 531 GPSRGLRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKQELNTDNPLGMGGAIADAF 590
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G+L+ +W+ + PR FK L+RFAPQFSGY QHDSQELLAFLLDGLHEDLNR+ +K
Sbjct: 591 GNLITNIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLDGLHEDLNRILKK 650
Query: 433 PYIEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
PYIE D G ++++ A W +KARNDS+IVD+FQGQY+STLVCP C+K+SI FD
Sbjct: 651 PYIEAPDWEGGDEKDLVAFAKRQWDIYKARNDSVIVDLFQGQYRSTLVCPECNKISIKFD 710
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PFMYLTLP+P+ V + S F V L L ++ ++
Sbjct: 711 PFMYLTLPIPNKKMWRGQVYFVPQDPSKPMQSFQVQLPAGTTVGKLRQKVAAQFGVETKR 770
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
L+ EV++H+I+++ ++ LI IKD + +
Sbjct: 771 -LICGEVWHHRIYKWIDDYEPLI-DIKDGDFV 800
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 86/157 (54%), Gaps = 37/157 (23%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
R + +S+ C+D F EE LG DD WYCP CKE RQATKK DLW PD+LV HLKRFS
Sbjct: 1120 VRPKTLSIEDCMDEFTKEEQLGEDDPWYCPSCKEFRQATKKFDLWKAPDILVVHLKRFSA 1179
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDG------------------------------ 847
R+ ++KL+ V+FP+ LDL+ ++
Sbjct: 1180 GRHSRDKLNMLVDFPLEGLDLTDRVEGTQALRRVQAEAKESGEELSESMLGSGILRPLED 1239
Query: 848 -------ESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
++ +YDL+A+ NH+GGLGGGHYTA+AK A
Sbjct: 1240 NDDAVAVDAPIYDLYAVDNHFGGLGGGHYTAFAKSPA 1276
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 26 RQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKR 85
+Q + ++ +L L G++++L+S WYR W+ C + D + ++
Sbjct: 228 QQQLDTIRPMKNLPLHAGDIWYLVSRSWYRRWD-AACAERRDSDPV------------EK 274
Query: 86 AE-RPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG-GPAL 143
AE PGPIDNSD++ + + ++R + E DY ++P++ W L WY GP
Sbjct: 275 AEIPPGPIDNSDLLDEDSTPAFA---QLRPQINEHIDYEMLPEEGWNLLVGWYGSKGPVF 331
Query: 144 PRKMISEGIVNEKRVEVFXLCLKLI 168
R++I ++ VE + L+L+
Sbjct: 332 ARQVIHGFSPGQESVEFYPPTLRLL 356
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
GLAGL NLGNTCFMNS+LQCL H L Q FLG Y ++N NPLGM GELA AFG LL
Sbjct: 1 GLAGLSNLGNTCFMNSSLQCLAHAVPLMQAFLGGTYIKDLNRTNPLGMKGELAEAFGMLL 60
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LW G ++V+PR+FK K+ RFAPQFSGY QHDSQE LAFLLDGLHED NR+K KPY E
Sbjct: 61 QQLWRGGVSSVSPRSFKAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKTKPYFE 120
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD GRPDEE+A E W ++ARN+SL+VD FQG KS L CP C+ S+ FDPFMYL+L
Sbjct: 121 TKDEPGRPDEELATEAWSQYRARNNSLVVDHFQGLLKSGLDCPKCAYHSVKFDPFMYLSL 180
Query: 497 PLPSTVTRTMTV 508
PLP + R + +
Sbjct: 181 PLPESRRRPVAL 192
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 93/139 (66%), Gaps = 8/139 (5%)
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
+DP LP+ ++R+ ++L C+ FL E L D WYCP+CKEH A
Sbjct: 172 FDPFMYLSLPL--------PESRRRPVALEDCMRVFLQPERLDESDAWYCPRCKEHVCAD 223
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
KKLDLW LP+VLV HLKRFSY+RY +NKLDT V+FP+ LDL Y+ G + +YD FA
Sbjct: 224 KKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPLHGLDLGSYVLRAQGVAPLYDCFA 283
Query: 857 ISNHYGGLGGGHYTAYAKV 875
+SNH+G +GGGHYTAYAK+
Sbjct: 284 VSNHFGSMGGGHYTAYAKL 302
>gi|409081365|gb|EKM81724.1| hypothetical protein AGABI1DRAFT_118809 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1253
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 208/352 (59%), Gaps = 21/352 (5%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL N+GNTCFMNSALQCLVHT +L+ YFL G + DE+N +NPLGM G +A AFG LL
Sbjct: 343 GTLGLSNMGNTCFMNSALQCLVHTKELSDYFLSGVFEDELNADNPLGMGGAIAEAFGSLL 402
Query: 377 RKLW--SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
++W S + +PR FK L +FAPQFSGY QHDSQEL+AFLLDGLHEDLNR+ +KPY
Sbjct: 403 HRIWADSGPSTSYSPREFKQVLQKFAPQFSGYQQHDSQELVAFLLDGLHEDLNRILKKPY 462
Query: 435 IEMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+E D G + E+ A + W + RNDS+IVD+FQGQY+STLVCP C KVSITFDPF
Sbjct: 463 VEKPDWEGGGNLELVQLAKKSWDGYLLRNDSVIVDLFQGQYQSTLVCPECGKVSITFDPF 522
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
MYLTLP+P+ + T+ + + + + + + KD+ L ++ D L
Sbjct: 523 MYLTLPIPAEKKWSHTIYYIPFDPAQSHLKIPIEINRDASFKDVRNLLGRWLNVEGD-NL 581
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY----------RFDRKQGGKIKLEIVNR 601
L E++NH+ ++ ++ + ++ + +++ IV Y F R+ + L +
Sbjct: 582 LTLEIFNHRFYKNLDD-SVMVGDMTENDVIVCYGLPCNAQQSRTFKRQPEDPLILPVF-L 639
Query: 602 WQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYS 653
K A + S LFG P V + + D++ + ++ L R S
Sbjct: 640 CDAKGAGQWAYSSRVSLFGYPTVVAVSPDE--ATDVNALYTVVMERLVRYTS 689
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 86/140 (61%), Gaps = 20/140 (14%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
K+ + + +SL CLD F EE LG DD+WYCPQCK+H+QATK+ DLW PDVLV HLK
Sbjct: 861 AAKEKKNKGLSLQDCLDEFTKEEELGEDDLWYCPQCKKHQQATKRFDLWKAPDVLVVHLK 920
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYD 853
RFS SR L++K+D F++FPI +L+L ++ + E +YD
Sbjct: 921 RFSNSRTLRDKIDAFIDFPIQDLNLEDMVRERRVAKALQAEGVNIEELNLTNLDEPLIYD 980
Query: 854 LFAISNHYGGLGGGHYTAYA 873
LF + H GGLGGGHY AY
Sbjct: 981 LFGVDEHMGGLGGGHYRAYV 1000
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 33/150 (22%)
Query: 18 LPCTPD----EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISF 73
L TP+ E+ +V+D K + ++ G +FL++ W++ W + G+E ++
Sbjct: 34 LASTPNMTLAEKLALVEDGKKKQ---MEIGENWFLVAHSWWKRWRKACTGEEDKEGAVT- 89
Query: 74 DSPHMNGVSSKRAERPGPIDNSDIIQ-NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEK 132
+ GP+DN+ ++ +GN +++ L +G D VP VW
Sbjct: 90 ------------EQDLGPVDNAPLLDPDGN---------LKQGLIDGLDVEFVPHDVWRC 128
Query: 133 LFCWYKGGP--ALPRKMISEGIVNEKRVEV 160
L WY G P +LPR+++ G E +E+
Sbjct: 129 LAIWY-GEPLHSLPRRVVPRGAAKEPTLEL 157
>gi|241705172|ref|XP_002413236.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215507050|gb|EEC16544.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 643
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 172/268 (64%), Gaps = 3/268 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS LQCL +T + YFLG + EINTENPLGM GELA+AF LL
Sbjct: 5 GYTGLDNLGNTCFMNSVLQCLANTREFRDYFLGGVFQGEINTENPLGMRGELAVAFAVLL 64
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LWS + + AP K ++ APQF+G+ QHD+QE +AFLLDGLHEDLNR+ KPY+E
Sbjct: 65 RWLWSGAQRSYAPSRLKSLISVKAPQFTGFAQHDAQEFMAFLLDGLHEDLNRIHNKPYVE 124
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS RPDE VA E W +K RNDS++VD+FQGQYKST++CP C KVSI FDPF+YL++
Sbjct: 125 SVDSANRPDEVVAEESWSRYKLRNDSIVVDLFQGQYKSTVICPECQKVSINFDPFLYLSV 184
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + V + + +P+ + L + +DL + + + L + EV
Sbjct: 185 PLPKK-QKIFVVHFYRWDPDQVPIKLRLRLNQDARVEDLKDEIFKKTHVS-PKNLRVLEV 242
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAY 584
YN +I++ F + + I + I A+
Sbjct: 243 YNRKIYKVFNRDDDSLMDITPKDLIFAW 270
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 84/130 (64%), Gaps = 9/130 (6%)
Query: 750 KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
KT F ++ ISL CL F E L P + WYCP CKEHRQATK+L LW LP VL+
Sbjct: 432 KTSFA----EEDGISLDQCLTLFTEPEVLSPQEAWYCPGCKEHRQATKELSLWRLPPVLI 487
Query: 810 FHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDGES----YVYDLFAISNHYGGL 864
LKRFS++R + ++K+D V+FPI LD+S Y ES VYDLFA+ NH+GG+
Sbjct: 488 IQLKRFSFTRSIFRDKIDKMVDFPINGLDVSPYYCGPACESGGPQPVYDLFAVINHHGGM 547
Query: 865 GGGHYTAYAK 874
GGHYTA+ +
Sbjct: 548 LGGHYTAFGR 557
>gi|118404614|ref|NP_001072879.1| ubiquitin specific peptidase 19 [Xenopus (Silurana) tropicalis]
gi|116487747|gb|AAI25669.1| hypothetical protein MGC145127 [Xenopus (Silurana) tropicalis]
Length = 1435
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 167/263 (63%), Gaps = 4/263 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA++F LL
Sbjct: 624 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFESEINCNNPLGTGGRLAVSFAVLL 683
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 684 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 743
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDEEVA+E W HK RNDS +VD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 744 TVDSDGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 803
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K + +++ ++S + +K E L LAE
Sbjct: 804 PLPQK-QKVLTVYYFAREPHKKPIKFLVSISKENSSAAEVLESISKSVRVKA-ENLQLAE 861
Query: 556 VYNHQIFRFFENPAELISSIKDD 578
V ++ R F L S +D
Sbjct: 862 VVKNRFQRIFRPSCSLDSVSPND 884
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCP+C +HR+A+K+L LW
Sbjct: 1183 KELECEEDPGSASEAARAGLFTLDQCLNLFTKPEVLAPEEAWYCPKCNQHREASKQLMLW 1242
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISN 859
LP++L+ LKRFS+ ++ ++K++ V+FP+ NLDLS + + +D + +YDL+A+ N
Sbjct: 1243 RLPNILIIQLKRFSFRTFIWRDKINDMVDFPVRNLDLSTFCIGQKEDHQRPIYDLYAVIN 1302
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1303 HYGGMIGGHYTAYARL 1318
>gi|281206178|gb|EFA80367.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 499
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/319 (44%), Positives = 193/319 (60%), Gaps = 25/319 (7%)
Query: 305 YDSYNTAKKGEK----GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTE 359
Y+ NT G++ G+ GL NLGNTCFMNS++QCL HT +YFL G Y+ +IN
Sbjct: 178 YNDSNTTSNGKEIVMHKGVCGLSNLGNTCFMNSSVQCLAHTIPFVEYFLSGRYTSDINKV 237
Query: 360 NPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
NPLGM G++ FG L+R +W SG + V P+ K + ++APQFSG +Q DSQ+LL+FLL
Sbjct: 238 NPLGMKGQIVEIFGKLMRDMW-SGASYVVPKNLKWAIGKYAPQFSGISQQDSQDLLSFLL 296
Query: 420 DGLHEDLNRVKQKPYIEMKDSG-GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
DGLHEDLN+V +KPYIE KD R D VANE W+NH RN S++V++FQGQYKSTLVC
Sbjct: 297 DGLHEDLNKVIKKPYIEEKDDKETRDDSVVANEQWENHCKRNQSVVVNLFQGQYKSTLVC 356
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA----------------NGSGLPMPF 522
CSKVSITFDPFM++TLP+P R + +F N S P+ +
Sbjct: 357 NQCSKVSITFDPFMFVTLPIPVPTERLFEILLFRCKPTGPVGPDSTGVYCLNNSMAPIHY 416
Query: 523 TVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIV 582
+ L K + L + LS A ++ L LAE++ ++I+ F + L S I+D + I+
Sbjct: 417 CLRLNKRDFVQTLRIELSKASGIET-PCLALAEIFRNRIYTFLSDQKNL-SFIRDRDVII 474
Query: 583 AYRFDRKQGGKIKLEIVNR 601
Y +L ++ R
Sbjct: 475 GYELPVAGDDVSRLHVMQR 493
>gi|452824759|gb|EME31760.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Galdieria
sulphuraria]
Length = 1022
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
+K GL GL NLGNTCFMN+ALQCL + L +YFL + Y +IN NPLGM G LA +
Sbjct: 329 KKAGLCGLVNLGNTCFMNAALQCLSNAAKLTEYFLSEKYKSDINKRNPLGMKGVLAEEYF 388
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
LL +WS ++ APR K ++A APQF+GY Q DSQEL+AFLLDGLHEDLNR++ KP
Sbjct: 389 RLLSHIWSGNESSFAPRQLKFQIALHAPQFTGYQQQDSQELMAFLLDGLHEDLNRIRNKP 448
Query: 434 YIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
YIE+ + G RPD+EVA+ WK H RN+S++VD+FQGQYKST++CP C KVS+TFDPFMY
Sbjct: 449 YIEVIEGGDRPDDEVASIAWKQHLQRNNSIVVDLFQGQYKSTVICPDCGKVSVTFDPFMY 508
Query: 494 LTLPLPSTVTRTMTVTVF 511
L+LP+PS R + + VF
Sbjct: 509 LSLPVPSKSERMIEILVF 526
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 15/160 (9%)
Query: 725 VLLDWT--------DDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEE 776
V+++WT D+ E +Y+ D H + ++ ++ CL + +E
Sbjct: 795 VVVEWTLEGICKQLFDMEEASFRAYVLD----HSISQSTQENSDAYPTIEDCLRRWSEKE 850
Query: 777 PLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNL 836
L D+ W+CP CK+H+QA+K L LW P++L+ HLKRFSYS + + K++TFV +P+ L
Sbjct: 851 ILSQDNAWFCPVCKDHKQASKHLQLWSTPEILIIHLKRFSYSIWSRTKVETFVKYPLNGL 910
Query: 837 DLSKYMKSK---DGESYVYDLFAISNHYGGLGGGHYTAYA 873
+L+ Y+ K +YDL+A+ NH+GGLGGGHYTAY+
Sbjct: 911 NLAPYIVGKGDIGAPQPLYDLYAVCNHFGGLGGGHYTAYS 950
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 42 EGNLYFLISTRWYRSWERYV-CGDEPSIDNISFDS---------------PHMNGVSSKR 85
+G ++L+S++WYR W Y D S F + + S K+
Sbjct: 25 KGTKWYLVSSKWYRHWCMYTETTDLVSTSPTRFRTGLHTFKCDVSDDSDDESQSFSSYKK 84
Query: 86 AERPGPIDNSDI---IQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
+RPGPIDN+ + I+ + SSE +E++ NL E D+VLVP+ VWE LF WY GGP
Sbjct: 85 TQRPGPIDNAYLVKSIEEVDQSSE--QVELKPNLLEQVDFVLVPKAVWELLFSWYGGGPE 142
Query: 143 LPRKMISEGIVNEKRVEVF--XLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIE 200
+ R ++ G E VE++ L + I +T I LSK ++L KV I
Sbjct: 143 ISRPVVL-GPSGECFVEIYPVELNISFICPSKTVETTIHLSKTTKIKELKNKVLLKLNIN 201
Query: 201 QEKARIWDYFNKQRSTSP--LDVSDQTLDDAMLQMDQDILLEVQVDNGIS 248
+ +N P LD ++T+ +A+L Q + + V N S
Sbjct: 202 NVTVSDLEVWNMLDDVPPVLLDNDEETVAEAVLVSGQKVQIRVNPQNSNS 251
>gi|443705947|gb|ELU02243.1| hypothetical protein CAPTEDRAFT_227854 [Capitella teleta]
Length = 893
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/598 (29%), Positives = 270/598 (45%), Gaps = 81/598 (13%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP-----LGMHG 366
K G+ G++N GNTCF+N+ +QCL +T L +YF+ D Y +I N G G
Sbjct: 132 KNRTPGVVGIRNHGNTCFLNAVVQCLNNTDLLVRYFVLDQYKLDIKRNNKQNAKKYGTKG 191
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
EL LL+ LWS FK + ++ Q+ GY QHD+QE L +LLD +HEDL
Sbjct: 192 ELTEHLAVLLKSLWSLKYTHDISSEFKSIVGKYGSQYRGYAQHDAQEFLMWLLDKVHEDL 251
Query: 427 NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
N +K Y K S GR DE VA E NH N+S I FQG +S+L+CP C + S+
Sbjct: 252 NIASKKKYRANKSSHGRSDEAVAQESLANHARCNNSAIYGFFQGLCRSSLMCPKCRRQSL 311
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDP + L+LP+P R + VTV Y N S + + L + KDL L+T K
Sbjct: 312 TFDPILSLSLPIPQKTKRPVYVTVVYHNASPKQVHIGLLLNESDTVKDLRHTLATD--TK 369
Query: 547 IDEG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD---------RKQGGKIKL 596
I E L+L E+Y R F + ++ +S + + + I A +++ + +
Sbjct: 370 IPEAQLILTEIYFDGFHRTFHD-SQPLSDLHESDQIYAIEAPPPLILSQQLKEENEHLTI 428
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
++N+ + E L+ A IA+ + + + +
Sbjct: 429 TVLNKQADHGRRAGCSAHETNASNI----------LADATTRIAIVRCMHKMGVLFRVHV 478
Query: 657 AHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI 716
G +LP +D L + D +S C P
Sbjct: 479 VDGLSGARYLPNDVD----------------------LPLYMPTVDRALSLCVPGGGP-- 514
Query: 717 LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAI--SLFSCLDAFLT 774
+H+K++++W + + + H++ VK Q+ + +L CL ++
Sbjct: 515 ----QHLKLMIEWEKHTKQCMIGNG-DEQTEEHESVSQVKLANQQPLLGTLDECLQLYMQ 569
Query: 775 EEPLGPDDMWYCPQCKEHRQAT-KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPI 833
EE LG D+ W CP C +Q T K L LW LP++LV HLKRF + KL+T + FP+
Sbjct: 570 EERLGSDNAWLCPNCHRRQQGTIKSLRLWSLPEILVIHLKRFKQDTVKRTKLNTLITFPV 629
Query: 834 LNLDLSKYM--------------------KSKDGESYVYDLFAISNHYGGLGGGHYTA 871
LD+S ++ D + YDLFA+ NHYG + GGHYT
Sbjct: 630 NGLDMSHHLYRNFHSNRSHTWSPWRSQKKHENDRDCCHYDLFAVCNHYGNMQGGHYTG 687
>gi|260801088|ref|XP_002595428.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
gi|229280674|gb|EEN51440.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
Length = 922
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 298/622 (47%), Gaps = 101/622 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEIN--------TENPLGMHGEL 368
GL+GL+N GNTCFMN+ LQCL +T LA+YF L Y +++ T GE+
Sbjct: 148 GLSGLRNHGNTCFMNAVLQCLSNTDMLAEYFVLNQYKSDLSRIRRWRDSTRLKPVTRGEV 207
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
F +L+ LWS FK +A++A Q+SGYNQHD+ E L +LLD +HEDLN
Sbjct: 208 TEDFAKILKALWSCQYTPKLTSDFKNTVAKYASQYSGYNQHDAFEFLLWLLDKVHEDLNC 267
Query: 429 VKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
++ Y + K + DE +A E NH+ N S + D+FQ QY+S+L CP C + S TF
Sbjct: 268 ASKRGYKKAKFGHKKTDEHLAAEAQANHQRCNSSFMYDLFQAQYRSSLTCPTCHRQSNTF 327
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DP++ ++LPLP TR + V Y V+L + C DL ++ + ++
Sbjct: 328 DPYICISLPLPQRQTRAIYPAVVYHRRKPRLTRIGVSLHQDSCVGDLRRLIADKADIPLN 387
Query: 549 EGLLLAEVYNHQIFR------------------FFENPAELIS-SIKDDEHIVAYRFDRK 589
+ ++L E+Y R FE P E+I S +D V D +
Sbjct: 388 Q-VVLTEIYFDGFHRSFSDDQPLSVVHDGDCIYAFEAPLEVIDLSCTNDNTPVPDTSDSQ 446
Query: 590 QGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLR 649
+ KL ++ + K+ + G + K FG P Y+ +L+ D+ + ++ +
Sbjct: 447 DSEQEKLLLL--FVNKTGA----GKQGKRFGPPSALYVPR-NLTFGDLQKVLLHNMADMM 499
Query: 650 RTYSSAKAHGGKENG---FLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERIS 706
R G + G F VI L+ E +++C + D+ +S
Sbjct: 500 R-------EGIRPQGSVRFQMRVIGGLAGK----CYLTEDDNMC-----LYMPTVDKALS 543
Query: 707 SCKPIQKDSILKPGKHIKVLLDWTDDVHE-LYDPS---YIKDLPVVHKTGFTVKKTRQEA 762
SC + H+K++L+W + L+ + +++L V + ++T Q+
Sbjct: 544 SCGTGGME-------HLKLVLEWEQETKACLFGNACEEKVEELDSVRQ-----QRTLQQK 591
Query: 763 ---ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT-KKLDLWMLPDVLVFHLKRFSYS 818
++L C EE LGP+D W+CP CK+ + T KKL LW LPDVL+ LKRF
Sbjct: 592 PLNVTLSDCFKLHTKEEKLGPEDGWHCPFCKKIQHGTTKKLSLWSLPDVLIIQLKRFKQV 651
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKD-GES-------------------------YVY 852
+ KL T V+FP+ NLD+ ++ ++ G S Y Y
Sbjct: 652 GMRRMKLYTSVDFPVSNLDMKPHVARRNYGNSGGLGLLTSWSPWRRHQHRTTARHPDYFY 711
Query: 853 DLFAISNHYGGLGGGHYTAYAK 874
DL+A+ NH+G + GGHYTA++K
Sbjct: 712 DLYAVCNHHGNMTGGHYTAFSK 733
>gi|281207388|gb|EFA81571.1| hypothetical protein PPL_05562 [Polysphondylium pallidum PN500]
Length = 1086
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 186/302 (61%), Gaps = 22/302 (7%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLR 377
+ GL NLGNTCFMNS++QCL HT A+YFL G Y+ +IN NPLGM G++A FG L+R
Sbjct: 447 VCGLSNLGNTCFMNSSVQCLAHTTPFAEYFLSGRYTLDINKVNPLGMKGQIAEIFGKLMR 506
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
+WS G V P+ K + ++APQFSG +Q DSQELL+FLLDGLHEDLN+V +KPYIE
Sbjct: 507 DMWS-GDTCVVPKNLKWAIGKYAPQFSGISQQDSQELLSFLLDGLHEDLNKVLKKPYIEE 565
Query: 438 KDSGGRPDEE--VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
K+ P E+ VA+E W+NH RN S++V++FQGQYKSTLVC CSKVSITFDPFM++T
Sbjct: 566 KEESKEPREDALVASEQWENHLKRNQSVVVNLFQGQYKSTLVCSQCSKVSITFDPFMFVT 625
Query: 496 LPLPSTVTRTMTVTVFYA----------------NGSGLPMPFTVTLMKHGCCKDLILAL 539
LP+P R V +F N + P+ + + L K + L + L
Sbjct: 626 LPIPVPTERLFEVLLFRCKPVGQLGPDSTGVYCLNSAMAPIHYCLRLHKREFVQTLRIEL 685
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIV 599
S ++ L LAE++ ++I+ F + L S IKD + I+ Y +L ++
Sbjct: 686 SKVSGIET-PCLALAEIFRNRIYTFLSDQKNL-SFIKDRDVIIGYELPVAGDDVSRLHVM 743
Query: 600 NR 601
R
Sbjct: 744 QR 745
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 22/152 (14%)
Query: 725 VLLDWTDDVHE-LYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
V +DW ++ + L D I++ +V + +K + I+L C F E LGP+D
Sbjct: 917 VTIDWRPEIFKYLDDNDNIENTQLVKQDQSVAIKASMGSDINLNDCFSLFTRNEKLGPND 976
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
W+CPQCK H++RF + + K++ FV+FP+ NLDLSK++
Sbjct: 977 TWFCPQCK-------------------IHIERFQF-LHRHEKINAFVDFPLDNLDLSKWV 1016
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K G +Y L+A+SNH GG+G GHYTA K
Sbjct: 1017 LNKSGVPPIYQLYAVSNHMGGMGAGHYTACVK 1048
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNIS----------- 72
E+R+I+++ N + L G +IS W R W YV DE S +++
Sbjct: 80 EQRRIIKE--NWKNEPLTAGQTVNIISAHWLRLWRNYVRYDENSPKSMTPLTSGGGGGGG 137
Query: 73 --------FDSPHMNGVSSKRAERPGP--IDNSDIIQNGNGSSEGDDLEVRRNLEEGQDY 122
S H S + P P I+N D+I + SEG + LE G+D+
Sbjct: 138 GSSVNSNSGVSGHAALKLSAEFDIPKPETINNRDLIDRED--SEGGHIIAESRLE-GEDF 194
Query: 123 VLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKL 167
++PQ++W+ L WY GGP + R +I G+ NEK VEV + + +
Sbjct: 195 EIIPQRIWDILVSWYAGGPEIKRTVIEMGVRNEKLVEVRPIVIMI 239
>gi|427794181|gb|JAA62542.1| Putative ubiquitin c-terminal hydrolase, partial [Rhipicephalus
pulchellus]
Length = 1119
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 170/272 (62%), Gaps = 3/272 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ LQCL +T + YFL + E+N +NPLGMHGELA+AF L+
Sbjct: 389 GYTGLDNLGNTCFMNAVLQCLANTREFRDYFLSATFQGELNRDNPLGMHGELAVAFAVLV 448
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LWS + + AP K ++ A QF+G+ QHD+QE +AFLLDGLHEDLNR+ KPY+E
Sbjct: 449 SWLWSGKQRSFAPDRLKRLISIKASQFTGFAQHDAQEFMAFLLDGLHEDLNRIHNKPYVE 508
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GRPD VA+E W N+K RNDS++VD+FQGQYKST++CP C KVSI+FDPF+YLT+
Sbjct: 509 RVESNGRPDSVVADESWSNYKLRNDSIVVDLFQGQYKSTVICPKCHKVSISFDPFLYLTV 568
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R V F + +P+ V L +DL + + + L L EV
Sbjct: 569 PLPKR-QRVFVVHFFALDPQSVPVKLRVRLNHDAKIQDLKEEIFKKTKVS-PKNLRLLEV 626
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDR 588
YN +I++ + L+ D+ DR
Sbjct: 627 YNRRIYKVYGREESLVGVTPKDQIFAFEVLDR 658
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ I+L CL F E L P + WYCP C+EHRQATK+ LW LP VLV LKRFS++R
Sbjct: 885 EDGITLDQCLRLFTEPEVLDPQEAWYCPGCREHRQATKEFSLWRLPVVLVIQLKRFSFTR 944
Query: 820 YL-KNKLDTFVNFPILNLDLSKYM---KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ ++K+D V+FP+ LD+S Y + DG +YDLFA++NH+GG+ GGHYTA+A+
Sbjct: 945 SIFRDKIDKMVDFPVYGLDMSPYYCGPGTSDGNPPIYDLFAVTNHHGGMLGGHYTAFAR 1003
>gi|145519321|ref|XP_001445527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412982|emb|CAK78130.1| unnamed protein product [Paramecium tetraurelia]
Length = 973
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 259/540 (47%), Gaps = 78/540 (14%)
Query: 42 EGNLYFLISTRWYRSWERYVCGDE------PSIDNISFDSPHMNGVSSKRAER---PGPI 92
+ N ++++S +W W+ YV +E PS + + +N + ER PI
Sbjct: 33 QNNQFYILSVKWLNLWKEYVSYEELLANKNPSRNFGKLNMDLINLDLEDKVERCLKYYPI 92
Query: 93 DNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGI 152
+ + + ++ NL+E DY++V + +W+ +Y G P + +S G
Sbjct: 93 N-----------THPWNTFMKENLQENIDYIIVDKDIWQFFTTYYHGTPIV---RMSNGT 138
Query: 153 VNEKRVEVFXLCLK-----------LIDSRDNSQTVIRLSKKASTRQ--------LYEKV 193
EK V V L K + R QT +L+ + L + V
Sbjct: 139 GIEKTVAVNLLKFKSTLLYPSVIRQIAMDRVQKQTFEKLNLQVDRSMKLKDYYNLLQKTV 198
Query: 194 CKLRG--IEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDN-GISMD 250
G + + RIW Y + Q+ +D A L+M+ ++ + D S+
Sbjct: 199 PTFTGNFAKDDNVRIWRYHSDQKDIQKALFADIQKQVASLEMNDEMSFDFNGDYIHYSIY 258
Query: 251 STGNDLALV-----------PIEP---SRSSLTIAG-----------GPALSNGHTTGYR 285
T D+ ++ I+P ++ + G N Y
Sbjct: 259 ETIEDVGILDNHLIIIEFKDEIKPWCIRNKAVQVEGKCENCQILKILNHPWCNAKAKDYN 318
Query: 286 FNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLA 345
+ FGS DD T + GLAGL NLGNTCFMNS QC+ +T L
Sbjct: 319 NHSMRCEKFGS-----DDDTIKGLTQQPNSIAGLAGLSNLGNTCFMNSGTQCISNTVPLT 373
Query: 346 QYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFS 404
+YFL + Y DEIN +NP+G G+L G LL+KLW ++ V P +K + +F P F
Sbjct: 374 EYFLSNQYFDEINMDNPIGTKGQLVKRVGSLLKKLWYGEKSVVTPTNYKKAVGQFQPMFK 433
Query: 405 GYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLI 464
GY+QHDS EL+ F+LDG+HEDLNRVK+KPY+E KDS GR D VA E W NH ARN S+I
Sbjct: 434 GYHQHDSSELITFVLDGIHEDLNRVKKKPYVETKDSDGRTDFVVAKESWINHLARNQSII 493
Query: 465 VDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF--YANGSGLPMPF 522
VD+ GQYKSTL CP C+++SITFDP++ + L +PS RT++ F + N + +PF
Sbjct: 494 VDLMYGQYKSTLKCPKCARLSITFDPYLMVQLGIPSQKKRTISFKYFDSFFNSTFKVIPF 553
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 18/131 (13%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS-RY 820
++SL CL E L ++ W+C C+EH QA K + ++ P +L+F LKRF S R
Sbjct: 792 SVSLADCLSFSQQPEQLNSENTWFCKVCQEHVQAYKSMQIYKAPQILIFTLKRFKASNRM 851
Query: 821 LKNKLDTFVNFPILNLDLSKYM-KSKDGESY----------------VYDLFAISNHYGG 863
K KL+TFV+FPI LD++ Y+ SK + Y +YDL+A+SNH+GG
Sbjct: 852 FKQKLETFVDFPINGLDMTDYLINSKTPQEYENETEDDNGENNKQRVIYDLYAVSNHFGG 911
Query: 864 LGGGHYTAYAK 874
LGGGHYTA AK
Sbjct: 912 LGGGHYTACAK 922
>gi|427794179|gb|JAA62541.1| Putative ubiquitin c-terminal hydrolase, partial [Rhipicephalus
pulchellus]
Length = 1130
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 170/272 (62%), Gaps = 3/272 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ LQCL +T + YFL + E+N +NPLGMHGELA+AF L+
Sbjct: 400 GYTGLDNLGNTCFMNAVLQCLANTREFRDYFLSATFQGELNRDNPLGMHGELAVAFAVLV 459
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LWS + + AP K ++ A QF+G+ QHD+QE +AFLLDGLHEDLNR+ KPY+E
Sbjct: 460 SWLWSGKQRSFAPDRLKRLISIKASQFTGFAQHDAQEFMAFLLDGLHEDLNRIHNKPYVE 519
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GRPD VA+E W N+K RNDS++VD+FQGQYKST++CP C KVSI+FDPF+YLT+
Sbjct: 520 RVESNGRPDSVVADESWSNYKLRNDSIVVDLFQGQYKSTVICPKCHKVSISFDPFLYLTV 579
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R V F + +P+ V L +DL + + + L L EV
Sbjct: 580 PLPKR-QRVFVVHFFALDPQSVPVKLRVRLNHDAKIQDLKEEIFKKTKVS-PKNLRLLEV 637
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDR 588
YN +I++ + L+ D+ DR
Sbjct: 638 YNRRIYKVYGREESLVGVTPKDQIFAFEVLDR 669
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ I+L CL F E L P + WYCP C+EHRQATK+ LW LP VLV LKRFS++R
Sbjct: 896 EDGITLDQCLRLFTEPEVLDPQEAWYCPGCREHRQATKEFSLWRLPVVLVIQLKRFSFTR 955
Query: 820 YL-KNKLDTFVNFPILNLDLSKYM---KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ ++K+D V+FP+ LD+S Y + DG +YDLFA++NH+GG+ GGHYTA+A+
Sbjct: 956 SIFRDKIDKMVDFPVYGLDMSPYYCGPGTSDGNPPIYDLFAVTNHHGGMLGGHYTAFAR 1014
>gi|427794621|gb|JAA62762.1| Putative ubiquitin c-terminal hydrolase, partial [Rhipicephalus
pulchellus]
Length = 1124
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 170/272 (62%), Gaps = 3/272 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ LQCL +T + YFL + E+N +NPLGMHGELA+AF L+
Sbjct: 394 GYTGLDNLGNTCFMNAVLQCLANTREFRDYFLSATFQGELNRDNPLGMHGELAVAFAVLV 453
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LWS + + AP K ++ A QF+G+ QHD+QE +AFLLDGLHEDLNR+ KPY+E
Sbjct: 454 SWLWSGKQRSFAPDRLKRLISIKASQFTGFAQHDAQEFMAFLLDGLHEDLNRIHNKPYVE 513
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GRPD VA+E W N+K RNDS++VD+FQGQYKST++CP C KVSI+FDPF+YLT+
Sbjct: 514 RVESNGRPDSVVADESWSNYKLRNDSIVVDLFQGQYKSTVICPKCHKVSISFDPFLYLTV 573
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R V F + +P+ V L +DL + + + L L EV
Sbjct: 574 PLPKR-QRVFVVHFFALDPQSVPVKLRVRLNHDAKIQDLKEEIFKKTKVS-PKNLRLLEV 631
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDR 588
YN +I++ + L+ D+ DR
Sbjct: 632 YNRRIYKVYGREESLVGVTPKDQIFAFEVLDR 663
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ I+L CL F E L P + WYCP C+EHRQATK+ LW LP VLV LKRFS++R
Sbjct: 890 EDGITLDQCLRLFTEPEVLDPQEAWYCPGCREHRQATKEFSLWRLPVVLVIQLKRFSFTR 949
Query: 820 YL-KNKLDTFVNFPILNLDLSKYM---KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ ++K+D V+FP+ LD+S Y + DG +YDLFA++NH+GG+ GGHYTA+A+
Sbjct: 950 SIFRDKIDKMVDFPVYGLDMSPYYCGPGTSDGNPPIYDLFAVTNHHGGMLGGHYTAFAR 1008
>gi|402223753|gb|EJU03817.1| UCH-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 970
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 182/285 (63%), Gaps = 33/285 (11%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNSA+QCL HT +LA+YFL G + EIN NPLGM G++A AFG L+
Sbjct: 21 GTMGLANLGNTCFMNSAVQCLAHTEELAEYFLTGVFRTEINRTNPLGMGGQIAEAFGALM 80
Query: 377 RKLWSSGRAAVA---------PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+LW A+ PR FK LA+FAPQFSGY QHDSQELLAFLLDGLHEDLN
Sbjct: 81 NRLWGPVTASNGSYSSGSSYSPREFKSILAKFAPQFSGYMQHDSQELLAFLLDGLHEDLN 140
Query: 428 RVKQKPYIEMKDSGGR--PDEEVA--NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
RV KPY+E D G+ P E +A ECW + RNDS+IVD+FQGQYKSTLVCP C+K
Sbjct: 141 RVLTKPYVEKPDWPGKGGPKELIAFAKECWDGYLKRNDSVIVDLFQGQYKSTLVCPECAK 200
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP---FTVTLMKHGCCKDL---IL 537
VSITFDP+MYLTLPLP + R V + + L P T+ L K K L +
Sbjct: 201 VSITFDPYMYLTLPLP--INRKWRGKVHFIPWA-LDKPRQRLTLELPKEADFKRLKQHVG 257
Query: 538 ALSTA--CCLKIDEGLLLAEVYNHQIFRFFENPAEL--ISSIKDD 578
AL+ A C L+ AE Y H ++F+E+ A + I++ DD
Sbjct: 258 ALTGADPTC------LIAAEPYQHVFWKFWEDVAPVGDINTGSDD 296
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 106/187 (56%), Gaps = 30/187 (16%)
Query: 716 ILKPGKHIKVLLDWTDDVHELY--DPSYIKDL------PVVHKTGFTVKKTRQEAISLFS 767
+LK G+ I + +W DD + + DP D P + + K ++ ISL+
Sbjct: 545 LLKQGEAI--MCEWNDDAAQYFFEDPYTTWDEFEDIVDPTIATSDEAEKTAGKKGISLYD 602
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CL F EE LG DD+WYCPQCK+H+QATKK ++W +PD+LV HLKRFS R L++KLD
Sbjct: 603 CLSEFTREEQLGEDDLWYCPQCKKHQQATKKFEIWSVPDILVVHLKRFSSGRLLRDKLDM 662
Query: 828 FVNFPILNLDLS---------KYMKSKDG-----------ESYVYDLFAISNHYGGLGGG 867
V+FP+ LDL K M+ +G E YDLFA+ H GGLGGG
Sbjct: 663 MVDFPLEGLDLEGRVEEKLEWKRMREAEGKANEKNGDPEEEPITYDLFAVDEHLGGLGGG 722
Query: 868 HYTAYAK 874
HY AYAK
Sbjct: 723 HYRAYAK 729
>gi|196009203|ref|XP_002114467.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
gi|190583486|gb|EDV23557.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
Length = 1517
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/625 (28%), Positives = 298/625 (47%), Gaps = 127/625 (20%)
Query: 18 LPCTPDEERQIVQDLKNQSDLD-LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDS- 75
LP T ++E+Q++ ++++ K ++++L+S W+R+W YV + S + S
Sbjct: 370 LPLTREKEKQVIVGWLDRANRHGFKSNDIWYLVSMSWWRNWLEYVGASKQSNHTKALSSS 429
Query: 76 ----PHMNGVSSKRAERP------------------------GPIDNSDIIQNGNG---- 103
P +N + RP G IDN ++++ N
Sbjct: 430 KLSMPPLNRNGNPANNRPLSKSHSSQTFNQRPVNLNGILPAPGLIDNLCLVESPNRRIPT 489
Query: 104 -SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFX 162
++EG L+ NL +DY L+P+ V++ L WY +LPR ++ + +E++
Sbjct: 490 LTNEGGRLKKNVNLIPRRDYQLLPEAVFKALCQWYGCNLSLPRH-VTTNKDGKAELELYP 548
Query: 163 LCLKL----------------------------------IDSRDNSQTVIR--------L 180
+C+K+ + S + ++++ R
Sbjct: 549 ICVKILRHTSPNRNSNSSSLWSTVTGFSGITFGGFGGFGVASVNTNESIPRKYLAYTACY 608
Query: 181 SKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLE 240
S+K + +Q+ E + ++ E R+W+Y N+ L+ T+++ L+ Q +L+E
Sbjct: 609 SRKNTLKQVLEFLGARLRMKVEDLRLWNYSNEDYP-QLLEDEQATIEELKLEDGQQVLIE 667
Query: 241 VQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
V+ ++D T +P +
Sbjct: 668 VR-----NIDMT------------------------------------WPEEMYQLAKRG 686
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
+ +KG G L N+GNTCFMNSALQC+ +T L +YF+ + EIN
Sbjct: 687 KEKDMRIVAKTEKGVTG----LSNMGNTCFMNSALQCVSNTQALTKYFVKQAHLHEINRV 742
Query: 360 NPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
NPLGM G +A +G+L+++LWS + P + + ++AP+F+G+ Q DSQELL+FLL
Sbjct: 743 NPLGMKGIIAKRYGELIQELWSGNTRSFVPLKMRLTICKYAPRFNGFQQQDSQELLSFLL 802
Query: 420 DGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
DGLHEDLNRV KPY+E+KDS GR DEEVA E W+NH RN S++VD+F GQ +S + C
Sbjct: 803 DGLHEDLNRVHDKPYVELKDSDGRSDEEVALEAWENHIKRNKSIVVDLFHGQLRSAVACK 862
Query: 480 VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
C S+TFDPF +L+LPLP + + VTV +GS + + L G D+ +AL
Sbjct: 863 TCDHASVTFDPFTFLSLPLPMDNSIFIEVTVVNMDGS-THTKYGLCLNSEGRYYDVKVAL 921
Query: 540 STACCLKIDEGLLLAEVYNHQIFRF 564
L+ + +LL E++ Q+ F
Sbjct: 922 MDYTQLEPSQ-MLLVELFGAQVKNF 945
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Query: 727 LDW-TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
+DW +H Y S ++ P+ H++ ++ + I L CL AF +EE LG D+ WY
Sbjct: 1170 IDWDPTALHLRYQSS--QEKPICHESVEISRQQLSQPIDLDKCLRAFTSEEELGEDESWY 1227
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMK 843
C +CK+HR ATKKL++W LP +L+ H+KRF + R++K++ + V FP++N+D KY+
Sbjct: 1228 CSKCKQHRVATKKLEIWKLPPILIVHMKRFQFVAGRWIKSQKN--VKFPLMNMDPYKYVV 1285
Query: 844 SKD 846
D
Sbjct: 1286 GHD 1288
>gi|145482423|ref|XP_001427234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394314|emb|CAK59836.1| unnamed protein product [Paramecium tetraurelia]
Length = 1041
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 274/548 (50%), Gaps = 97/548 (17%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP 91
L+ Q + + ++ + Y+++S W+ W+++V D+ +NG + P
Sbjct: 41 LQLQENFEDEDCDKYYILSKNWFDQWKQHVSYDQV-----------VNG------QAPDK 83
Query: 92 IDNSDIIQNGNG----------------SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFC 135
++QN N +S ++ ++ NL+E +DY+++ QQ+ L
Sbjct: 84 KFGQTMLQNYNNELLEMRINECFKYYPLNSNPWNIWLKPNLQEDKDYIVISQQIQNYLNQ 143
Query: 136 WYKGGPALPRKMISEGIVNEKRVEVFXLCLKLI-------DSRDN----SQTVIRLSKKA 184
Y+G P + R + +G + V +F LI ++DN + ++ +
Sbjct: 144 NYRG-PQIVRNSVGQGKDKKVVVNLFKFNAALILPNTIIQIAQDNLTQFEKEYLQADENC 202
Query: 185 STRQLYEKVCK----LRGI--EQEKARIWDYFNK-----------QRSTSPLDVSDQTLD 227
+ Y + K RG Q RIW Y N+ ++ LD +D +
Sbjct: 203 VLKDFYALIQKTVHTFRGNYNNQNGVRIWRYKNQNDPHKALFAEIRKQVQDLDFNDDQVF 262
Query: 228 DAM---LQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAG------GPALSN 278
D ++ DI L+ S+ T NDL ++ + S I G S
Sbjct: 263 DFSGDPIENSADITLK-------SLKLTDNDLVVIEFQQSFKPWCIRHPSVPIEGKCESC 315
Query: 279 GHTTGYRFN-QYPGSSFGSTFMDMDD-----------GYD-----SYNTAKKGEKGGLAG 321
G + F + ++ S ++D G D + N +++ KG +AG
Sbjct: 316 GSISELHFPCKCKKVAYCSEKCKVNDERYHLPKCDPCGSDDEQVKNMNISEQSVKG-VAG 374
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCFMNS QCL +T L++YF+ + Y DEIN +NPLG +G+L + L++KLW
Sbjct: 375 LGNLGNTCFMNSGTQCLSNTYQLSEYFITNKYFDEINEDNPLGTNGQLVRKYASLIKKLW 434
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
+ V P +FK + +F P F G+ QHDS EL+ FLLDGLHEDLNRVK+KPY+E KD+
Sbjct: 435 CGDKNIVIPTSFKKAVGQFQPMFKGFQQHDSSELITFLLDGLHEDLNRVKKKPYVESKDN 494
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
G+PD EVA E W+NH ARN S+IVD+ GQYKSTL CP CS++SITFDPF+ L +PS
Sbjct: 495 QGKPDFEVAKESWQNHLARNQSIIVDLMHGQYKSTLKCPTCSQISITFDPFLTCGLSIPS 554
Query: 501 TVTRTMTV 508
+++ +
Sbjct: 555 KKLKSIQI 562
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 26/140 (18%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR- 819
+ ++L CL E L D+ WYC CKEH QA K + ++ D+L+F LKRF S
Sbjct: 853 QKVTLQECLKQSEQPEQLAEDNAWYCKICKEHVQAFKSMQIYKASDILIFTLKRFKASSG 912
Query: 820 YLKNKLDTFVNFPILNLDLSKYM-------------------------KSKDGESYVYDL 854
+ K KL+TFV+FP+ LDL++++ K D + +YDL
Sbjct: 913 FFKQKLETFVDFPVKGLDLTEFILNKNRPLDYDKETQQKEMIEEEFPEKRDDHKKLIYDL 972
Query: 855 FAISNHYGGLGGGHYTAYAK 874
FA+SNH+GG+GGGHYTA+ K
Sbjct: 973 FAVSNHFGGMGGGHYTAFGK 992
>gi|145546913|ref|XP_001459139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426962|emb|CAK91742.1| unnamed protein product [Paramecium tetraurelia]
Length = 1025
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 263/527 (49%), Gaps = 82/527 (15%)
Query: 46 YFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNG-- 103
Y+++ST W W++YV D+ I+N N +S P ++ Q N
Sbjct: 58 YYILSTNWLDKWKQYVSYDQ-VINN-------SNVPNSTGQIIPQNFNHDLFEQYPNECF 109
Query: 104 -----SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRV 158
S+ + +R NLEEG Y+++ QQ+ F Y G + R +G EK+V
Sbjct: 110 KYYPLSTNPWNQWLRPNLEEGTHYIVISQQL-SSYFNQYYRGTNIVRNATGKG--QEKKV 166
Query: 159 EV----FXLCLKLIDS-----RDN----SQTVIRLSKKASTRQLYEKVCK----LRGIEQ 201
+ F L + ++ +DN + +++ + A+ ++ Y + K RG
Sbjct: 167 VINLLKFYAVLMIPNTVNQIAQDNLTQLDKEYLQVDESANLQEYYGTILKTVPTFRG-NY 225
Query: 202 EKARIWDYFNKQRSTSPL--DVSDQTLDDAMLQMDQDILLE-----VQVDNGISMDS--- 251
RIW Y N L ++ Q D L + D + +Q+ + I+ S
Sbjct: 226 NGVRIWRYTNDTDPHKALFAEIKKQVQD---LDFNDDQVFNFTGSPIQISSEITFKSLNL 282
Query: 252 TGNDLAL----------------VPIE---PSRSSLTIAGGPALSNG--------HTTGY 284
T D+ + VP+E ++T+ P +
Sbjct: 283 TDKDILVIEFQQYNRPWCIRHPTVPVEGKCEGCCNITVLNFPCVCKKVSYCTEQCKINDE 342
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
RF+ GS D+ S N + KG +AGL NLGNTCFMNS QCL +T L
Sbjct: 343 RFHLAKCDRLGSD----DEQVKSMNYSDNSIKG-IAGLSNLGNTCFMNSGTQCLSNTYPL 397
Query: 345 AQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQF 403
+YF+ + Y +EIN +NPLG +G+L FG LL+KLW + V P +FK + +F P F
Sbjct: 398 KEYFISNKYFEEINEDNPLGTNGQLVRKFGSLLKKLWCGDKNVVIPTSFKKAVGQFQPMF 457
Query: 404 SGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSL 463
G+ QHDS EL+ FLLDGLHEDLNRVK+KPY+E KD GRPD EVA E W+NH ARN S+
Sbjct: 458 KGFQQHDSSELITFLLDGLHEDLNRVKKKPYVESKDYQGRPDVEVAKESWENHLARNQSI 517
Query: 464 IVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
IVD+ GQYKSTL CP C ++SITFDPF+ + L +P+ +++ + V
Sbjct: 518 IVDLMHGQYKSTLKCPTCQQISITFDPFLTVGLGIPNKKQKSIQIKV 564
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 80/128 (62%), Gaps = 11/128 (8%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ Q +SL CL E L D+ WYC CKEH QA K + ++ D+L+F LKRF
Sbjct: 846 STQPKVSLQDCLRFSEQPEQLAEDNAWYCKVCKEHVQAYKSMQIYKASDILIFTLKRFKA 905
Query: 818 SR-YLKNKLDTFVNFPILNLDLSKYMKSKDG----------ESYVYDLFAISNHYGGLGG 866
S + K KL+TFV FP+ LDL++++ +K+ + +YDL+A+SNH+GG+GG
Sbjct: 906 SHGFFKQKLETFVEFPVQGLDLTEFILNKNKPNENQIQEEQKKLIYDLYAVSNHFGGMGG 965
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 966 GHYTAYAK 973
>gi|358333828|dbj|GAA52307.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Clonorchis sinensis]
Length = 883
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 259/524 (49%), Gaps = 67/524 (12%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSK 84
++Q V+ L N+ EG +++I +W+ W +F G +
Sbjct: 24 QKQEVESLLNRP----VEGRAWYVIDLQWWNKW-------------CAFTDAVAKGENLD 66
Query: 85 RA--ERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
A + P I+N++++ G + +++ +L QD L+P +VW+ L +Y
Sbjct: 67 LACDDYPAEINNTNLL--------GTNGKLKPDLLREQDITLIPGEVWDLLVNYYGCVHT 118
Query: 140 GPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
++ ++ + VE++ C I+ + ++ T + + +L
Sbjct: 119 DTSVFKRTAVQTPSGRWVVEIYPPCFSFIELGSQNTRFTGTYSESQTIGHLKNIVRLTLK 178
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALV 259
+ + L T+ +A L+ + I +++V NG
Sbjct: 179 LDPNTNVRLFIQDGLLCDELTDDSMTIGEASLERQKVIYFKLEVING------------- 225
Query: 260 PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGL 319
P + L GG L N ++ ++ FG+ + +G + G+
Sbjct: 226 ---PKANEL---GGSRLGNNVSSPSQY------GFGNWLPQLTNG--------SKQLRGV 265
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMNSA+QCL + PDL +YFLG++ +IN NPLG G +A A+ +L+ ++
Sbjct: 266 CGLSNLGNTCFMNSAIQCLSNVPDLTRYFLGNWKVDINKYNPLGTQGRIATAYAELIGRM 325
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
WS + PR K ++A A QF GY QHDS ELL FLLDGLHEDLN+V KPYI+ KD
Sbjct: 326 WSGLYSYDVPRTLKREIAAIANQFYGYAQHDSHELLMFLLDGLHEDLNKVIDKPYIQYKD 385
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
+G RPDE VA E W NHKARNDS+IVD F GQ KST+VCP C++ S+TFDPF L+LPL
Sbjct: 386 AGDRPDEVVATEAWGNHKARNDSVIVDYFHGQLKSTVVCPDCNERSVTFDPFASLSLPLS 445
Query: 500 --STVTRTMTVTVFYANGS--GLPMPFTVTLMKHGCCKDLILAL 539
ST R + V + + P+ + V + +DLI +L
Sbjct: 446 EVSTFLRVVHVWPWVCDDRQHAGPIRYEVMVSAEFFVRDLITSL 489
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 74/110 (67%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL C+ F+ E L ++WYC +CK+ +QATKK DLW LP VL+ LKRF + ++
Sbjct: 676 SLLDCVRRFIRTEKLSARNLWYCSRCKKEKQATKKFDLWSLPKVLIIQLKRFRSTFRSRD 735
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
K+D+FV FP+ LDL+ ++ E ++YDL +SNH G LGGGHYTAYA
Sbjct: 736 KIDSFVEFPVKGLDLTPWVLRDTKEQFIYDLLGVSNHMGYLGGGHYTAYA 785
>gi|327266242|ref|XP_003217915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Anolis
carolinensis]
Length = 1414
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/249 (52%), Positives = 153/249 (61%), Gaps = 2/249 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 568 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAVLL 627
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 628 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 687
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W HK RNDS IVD+FQGQYKS LVCPVCSKVSITFDPF+YL +
Sbjct: 688 TVDSDGRPDEVVAEEAWHRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPV 747
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV F P+ F V++ K +L + E L LAEV
Sbjct: 748 PLPQK-QKVLTVYYFAKEPHKKPVKFLVSISKENSTAMEVLDSVSHSVRVNPENLRLAEV 806
Query: 557 YNHQIFRFF 565
++ R F
Sbjct: 807 IKNRFHRMF 815
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
KDL V G + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1134 KDLECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1193
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDGESY--VYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V+FP+ +LDLSK+ + E +YDL+A+ N
Sbjct: 1194 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGQKDEQQLPMYDLYAVIN 1253
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1254 HYGGMIGGHYTAYARL 1269
>gi|449276706|gb|EMC85138.1| Ubiquitin carboxyl-terminal hydrolase 19 [Columba livia]
Length = 1425
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/250 (52%), Positives = 157/250 (62%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 582 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLL 641
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 642 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 701
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVCSKVSITFDPF+YL +
Sbjct: 702 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPV 761
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID-EGLLLAE 555
PLP + +TV F P+ F V++ K +L S A +++ E L LAE
Sbjct: 762 PLPQK-QKVLTVYYFAKEPHKKPIKFLVSISKENSSAMEVLD-SVAHSVRVKPENLRLAE 819
Query: 556 VYNHQIFRFF 565
V + R F
Sbjct: 820 VIKNHFHRMF 829
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 93/136 (68%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L V G + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1142 KELECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1201
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDGESY--VYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V+FP+ +LDLSK+ + GE +YDL+A+ N
Sbjct: 1202 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQLPMYDLYAVIN 1261
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1262 HYGGMIGGHYTAYARL 1277
>gi|392579018|gb|EIW72145.1| hypothetical protein TREMEDRAFT_36466 [Tremella mesenterica DSM
1558]
Length = 1317
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 8/205 (3%)
Query: 310 TAKKGEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGE 367
T++ KG GL GL NLGNTCFMNSA+QCL +T +L+QYFL G Y DE+N +NPLGMHG+
Sbjct: 388 TSQGRSKGKGLVGLHNLGNTCFMNSAVQCLSNTQELSQYFLSGVYRDELNPDNPLGMHGQ 447
Query: 368 LALAFGDLLRKLW--SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
+A AFG ++ LW S A+ +PR K +RFAPQF+GY QHD+QE +AFLLDGLHED
Sbjct: 448 VAEAFGGVIEALWTLSGPHASFSPRQLKSTTSRFAPQFAGYGQHDTQEFIAFLLDGLHED 507
Query: 426 LNRVKQKPYIEMKD---SGGRPD-EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
LNR+K+KPYIE D GG E+ ECW+ +K RNDS+IVD+FQGQ +STLVCP C
Sbjct: 508 LNRIKKKPYIEKPDWKPGGGNVQLAELGKECWEGYKQRNDSVIVDLFQGQLQSTLVCPEC 567
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTM 506
K SIT DPFMYLT+PLP TR +
Sbjct: 568 HKESITMDPFMYLTVPLPIAQTRQI 592
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 104/183 (56%), Gaps = 29/183 (15%)
Query: 716 ILKPGKHIKVLLDWTDD-VHELYD----PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLD 770
+++PG+ I +WT +E +D P I D P + K K+ + I + CLD
Sbjct: 946 VVRPGEGI--FCEWTHKRFNEYFDTAFKPEEIID-PQIQKEA--EKRKAGKNIGIEDCLD 1000
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVN 830
F EE LG DD+WYCPQCK+H+ ATKKL+++ PD+LV +KRF SR L +KLD V+
Sbjct: 1001 EFSKEETLGQDDLWYCPQCKKHQAATKKLEIYKAPDILVICIKRFGNSRRLSDKLDHMVH 1060
Query: 831 FPILNLDL-------------------SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
FPI LDL +K + E +YDL+A+ NH+GG+GGGHYTA
Sbjct: 1061 FPIDGLDLEERIGECQVAKRLDLSTEQAKEYGMRVDEPMIYDLYAVDNHFGGMGGGHYTA 1120
Query: 872 YAK 874
+ +
Sbjct: 1121 FCR 1123
>gi|66809747|ref|XP_638597.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60467205|gb|EAL65239.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1089
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/307 (44%), Positives = 187/307 (60%), Gaps = 25/307 (8%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDL 375
G + GL NLGNTCFMNS++QCL HT L +YFL G Y +IN NPLGM G++A +G L
Sbjct: 400 GKVCGLSNLGNTCFMNSSIQCLAHTGPLVEYFLSGRYLGDINKTNPLGMKGQIADIYGKL 459
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
++ +WS G + VAP+ K + ++APQFSG +Q DSQELL+FLLDGLHEDLN+V +KPY
Sbjct: 460 MKDMWS-GSSCVAPKHLKWIIGKYAPQFSGISQQDSQELLSFLLDGLHEDLNKVIKKPYQ 518
Query: 436 EMKDSGGRPDEE--VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
E KD P E+ VANE W NH RN S+IV++FQGQYKSTLVC CSKVSITFDP+M+
Sbjct: 519 EEKDEPKEPREDIVVANEQWDNHIKRNQSIIVNLFQGQYKSTLVCAKCSKVSITFDPYMF 578
Query: 494 LTLPLPSTVTRTMTVTVFYA-------------------NGSGLPMPFTVTLMKHGCCKD 534
+TLP+P R V +F N + P+ + + L K +
Sbjct: 579 VTLPIPVPTERLFDVLLFRRKPQMGSEALGPDPNGIYCLNNAMSPIKYCLKLPKREDVET 638
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKI 594
L + LS ++ + LAE + ++I+ F + LI SIKD + +AY
Sbjct: 639 LRVELSKIVGIE-SSCIALAETFKNRIYTFLNDQKNLI-SIKDKDVTIAYELPHAGDDIS 696
Query: 595 KLEIVNR 601
++ +++R
Sbjct: 697 RIHVMHR 703
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 17/161 (10%)
Query: 727 LDWTDDVHELYD---------PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
+DW ++ + D P ++D + KT F + I+L CL + E
Sbjct: 883 IDWRPEILKYIDFTEHDDPNSPFTVQDKSIQLKTEF------RNEITLNDCLQLYTKSEK 936
Query: 778 LGPDDMWYCPQCKEHRQAT-KKLDLWMLPDVLVFHLKRFSYSR-YLKNKLDTFVNFPILN 835
LG +D WYCPQCK H + + KKL+LW P +LV HLKRF Y + K++ FV+FP+ N
Sbjct: 937 LGTNDTWYCPQCKAHIEGSMKKLELWSAPKILVVHLKRFHYVHGHRHEKINAFVDFPLDN 996
Query: 836 LDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
LD+S+++ +K +Y L+A+SNH GG+G GHYT+ K N
Sbjct: 997 LDISQWVLNKSNPPPIYQLYAVSNHMGGMGSGHYTSCIKNN 1037
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 42/178 (23%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSP------- 76
E+++++++ +Q +L G + +IS RW + W+ YV D+ + N S +P
Sbjct: 7 EQKKLIKENWSQ---ELVSGEVVNIISARWLKLWKNYVKYDDNTTLNSSNTTPLNCSTTT 63
Query: 77 ---------HMNGVSSKRAE--------------------RPGPIDNSDIIQNGNGSSEG 107
++K E +P IDN +II+ GN SEG
Sbjct: 64 STTTTTTTTTTATTNNKSVEDNNNSSANNNNNNSIQFDSAKPESIDNREIIE-GN-DSEG 121
Query: 108 DDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCL 165
+ + V + + E +DY ++P +VW+ L WY+GGP + RK++ G+ NE VEV L +
Sbjct: 122 EPI-VSKRVTEKEDYEIIPNRVWKLLVSWYQGGPEIKRKVVELGVRNELYVEVRPLLV 178
>gi|405121660|gb|AFR96428.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus neoformans
var. grubii H99]
Length = 1418
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 161/233 (69%), Gaps = 10/233 (4%)
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENP 361
D + + ++ + GL GLQNLGNTCFMNSA+QCL +T +L+QYFL G Y+DE+N +NP
Sbjct: 430 DAVQTRSQTRERKGKGLVGLQNLGNTCFMNSAVQCLSNTKELSQYFLSGVYTDELNRDNP 489
Query: 362 LGMHGELALAFGDLLRKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
LGM G++A AFG ++ LW+ S ++ +PR K +RFAPQF+GY QHD+QE +AFL
Sbjct: 490 LGMQGQIAEAFGQVVENLWAPSSSMHSSYSPRQLKWTTSRFAPQFAGYGQHDTQEFIAFL 549
Query: 419 LDGLHEDLNRVKQKPYIEMKD----SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKS 474
LDGLHEDLNR+ +KPYIE D G + E+ ECW +K RNDS+IVD+FQGQ KS
Sbjct: 550 LDGLHEDLNRILKKPYIEKPDWKPGGGNKELAELGKECWDGYKKRNDSVIVDLFQGQLKS 609
Query: 475 TLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
TLVCP C K SITFDPFMYLT+PLP R VT F + P P V L+
Sbjct: 610 TLVCPECHKESITFDPFMYLTVPLPIAQNRQFKVT-FVPRDTEKP-PVNVKLL 660
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 38/188 (20%)
Query: 716 ILKPGKHI------KVLLDWTDDV---HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
+++PG+ I +W +D ++ DP+ KDL KK + I +
Sbjct: 1018 VVRPGEGIFCEWSGADFAEWLNDNVKGGDVIDPAISKDL---------AKKREGKHIGIE 1068
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
CLD F EE LG DD+WYCP CK+H+ ATKKL+++ PD+LV +KRF SR + +KLD
Sbjct: 1069 DCLDEFSKEETLGQDDLWYCPVCKKHQAATKKLEIYKAPDILVICIKRFGSSRRMGDKLD 1128
Query: 827 TFVNFPILNLDL--------------------SKYMKSKDGESYVYDLFAISNHYGGLGG 866
V+FPI LDL Y DGE +YDL+A+ NH+GG+GG
Sbjct: 1129 NLVHFPIDGLDLEDRIGERQVVKTLKLNGEDVEAYGIEDDGEPLLYDLYAVDNHFGGMGG 1188
Query: 867 GHYTAYAK 874
GHYTA+ +
Sbjct: 1189 GHYTAFCR 1196
>gi|260799513|ref|XP_002594740.1| hypothetical protein BRAFLDRAFT_224157 [Branchiostoma floridae]
gi|229279976|gb|EEN50751.1| hypothetical protein BRAFLDRAFT_224157 [Branchiostoma floridae]
Length = 915
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 184/284 (64%), Gaps = 5/284 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ LQ L +T +L + + + +++NTEN LG G+LA+AF +L
Sbjct: 187 GFTGLDNLGNTCFMNATLQALANTRELRDFCQSNKFKEDLNTENVLGSGGKLAIAFACVL 246
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LWS R + AP K +A A QF+G+ QHD+QE LAFLLDGLHEDLNR++ KPY
Sbjct: 247 RTLWSGTRTSYAPSRLKSIIATKAHQFTGFAQHDAQEFLAFLLDGLHEDLNRIQDKPYTT 306
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GRPD EVA+E W+ + RNDS +VD+FQGQ+KSTLVCPVCSKVS+TFDPF YL++
Sbjct: 307 TVESDGRPDAEVADEAWRIYMKRNDSFMVDLFQGQFKSTLVCPVCSKVSVTFDPFAYLSV 366
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP RT++V N + P+ F+V L +DL LA+ K + L + EV
Sbjct: 367 PLPKK-QRTISVYFQSRNPANKPVLFSVPLAVDAAVEDLKLAIGRRTETKA-QNLRVFEV 424
Query: 557 YNHQIFRFFENPAELISSIKDDEHI-VAYRFDRKQGGKIKLEIV 599
Y I F+ N + +S+++ ++HI V D++Q + E+
Sbjct: 425 YKSGI-HFWYNRGDTLSNVQANDHIMVCEVLDQQQVREAVYEVA 467
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL- 821
I+L CL F E L P++ WYCP CK+HR+ATK++ LW LP L+ LKRFS+ +
Sbjct: 754 ITLQQCLQLFTEPETLAPEEAWYCPSCKQHREATKQMSLWRLPHTLIIQLKRFSFRNLIW 813
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESY---VYDLFAISNHYGGLGGGHYTAYAKV 875
++K+ V FP+ +LD+S Y S G +YDL+A +H+GGL GGHYTAYA++
Sbjct: 814 RDKITKMVQFPLTSLDMSGYCGSDIGPGEAPPIYDLYATVDHHGGLLGGHYTAYAQL 870
>gi|363738688|ref|XP_003642052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Gallus
gallus]
Length = 1367
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 161/250 (64%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 591 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLL 650
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 651 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 710
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVCSKVSITFDPF+YL +
Sbjct: 711 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPV 770
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K + +++ +++ + +K D L LAE
Sbjct: 771 PLPQK-QKVLTVYYFAKEPHKKPIKFLVSISKENSSAMEVLDSVAHSVHVKPD-NLRLAE 828
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 829 VIKNRFQRMF 838
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L V + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1151 KELECVEDPSSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1210
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDGESY--VYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V+FP+ +LDLSK+ + GE +YDL+A+ N
Sbjct: 1211 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQLPMYDLYAVIN 1270
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1271 HYGGMIGGHYTAYARL 1286
>gi|326928027|ref|XP_003210186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Meleagris
gallopavo]
Length = 1426
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 161/250 (64%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 583 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLL 642
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 643 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 702
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVCSKVSITFDPF+YL +
Sbjct: 703 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPV 762
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K + +++ +++ + +K D L LAE
Sbjct: 763 PLPQK-QKVLTVYYFAKEPHKKPIKFLVSISKENSSAMEVLDSVAHSVHVKPD-NLRLAE 820
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 821 VIKNRFQRMF 830
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L V + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1143 KELECVEDPSSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1202
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDGESY--VYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V+FP+ +LDLSK+ + GE +YDL+A+ N
Sbjct: 1203 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGRKGEQQLPMYDLYAVIN 1262
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1263 HYGGMIGGHYTAYARL 1278
>gi|383866029|ref|XP_003708474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Megachile
rotundata]
Length = 935
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 305/651 (46%), Gaps = 90/651 (13%)
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
S GH T +R GS+ D+ G+ GL+N GNTCFMN+ LQ
Sbjct: 137 SQGHKTSHR------DDLGSSAGDIRVPPPRPAHIPPDRVPGVIGLRNHGNTCFMNAVLQ 190
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALAFGDLLRKLWSSGRAAVAPR 390
CL HT LA+YF+ D Y +++ N L G GE+ LL+ +WS
Sbjct: 191 CLSHTDILAEYFVLDQYKVDLSRRNKLNSKKYGTKGEITEQLALLLKAIWSCQYDPEMST 250
Query: 391 AFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN 450
AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+ +K Y +K+S GRPD+ VA
Sbjct: 251 AFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATKKKYKIIKNSFGRPDDIVAA 310
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR-TMTVT 509
E NH N+S + VFQ Q++S+L CP C + S TFDPF+ +++P+P + + V
Sbjct: 311 ETLANHVRCNNSFVHAVFQAQFRSSLTCPRCHRQSNTFDPFLCVSVPVPQNHRQMNLFVN 370
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKIDEG-LLLAEVYNHQIFRFFE 566
V Y + + V++ + ++L ILA T IDE +LL E+++ R F
Sbjct: 371 VLYTSQQPRQVKIGVSVNQAANVRELREILASDTG----IDENHMLLTEIHDEGFHRTFS 426
Query: 567 NPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTY 626
+ + +S I +++ + + + + I+ W A KG R+ FG+P
Sbjct: 427 D-CQPLSVITENDPLYCIELPQLKEPAEQAYILLVWINVLA----KGDLRQRFGSPYTMQ 481
Query: 627 LEEEHLSGADID-IAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
+ E S D+ + + ++ + L ++ G N + + + ++
Sbjct: 482 VSRE-TSYQDLQKLLLKEMHAVLADDVLTSSQSPGLFNIRVADPAATPVQDEHPCIDPCV 540
Query: 686 LEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDW---------TDDVHEL 736
L + ++ L+L + DS +H+K++L+W DD ++
Sbjct: 541 EHPLYTEQIEQALALCAD----------DS---GPQHVKLILEWDEATKCNIIQDDSDQI 587
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
+ + +K L + G A++L C D + E LG +D W+CP C + ++
Sbjct: 588 EEHASVKQLKTNSELG--------GAVTLEECFDLYTRAEILGAEDAWHCPYCNKKQEVV 639
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDTFVNFPILNLDLSKYMKSKDGESY---- 850
KKL LW LPD+LV HLKRF + +KL V+FP+ D++ ++ +++
Sbjct: 640 KKLGLWSLPDILVIHLKRFRQQSKQRSTSKLTMLVDFPLYGFDMTPHLAHNGVQTHNSVS 699
Query: 851 --------------------------VYDLFAISNHYG-GLGGGHYTAYAK 874
VYDL+AI NH+G L GGHYTA+ +
Sbjct: 700 SLGGLGWSPWKKPRPRQQNIPKYDENVYDLYAICNHHGQDLQGGHYTAFCR 750
>gi|334333719|ref|XP_001367829.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Monodelphis domestica]
Length = 1468
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 161/250 (64%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 671 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEAEINYSNPLGTGGRLAIGFAVLL 730
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 731 RALWKGTHHAFQPSKLKAIVASKANQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 790
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVCSK+SITFDPF+YL +
Sbjct: 791 TVDSDGRPDEVVAQEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKLSITFDPFLYLPV 850
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K + +++ +L+ + +K E L LAE
Sbjct: 851 PLPQK-QKVLTVYYFAKEPHKKPVKFLVSISKENSSAMEVLDSLAQSVHVK-PESLRLAE 908
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 909 VIKNRFHRVF 918
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L V + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1219 KELECVEDPSSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1278
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISN 859
LP+V + LKRFS+ ++ ++K++ V FP+ NLDLSK+ + D + YDL+A+ N
Sbjct: 1279 RLPNVFIIQLKRFSFRSFIWRDKINDMVEFPVRNLDLSKFCIGQKDDRQLPTYDLYAVIN 1338
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1339 HYGGMIGGHYTAYARL 1354
>gi|328788793|ref|XP_396802.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 1
[Apis mellifera]
Length = 935
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/618 (29%), Positives = 296/618 (47%), Gaps = 100/618 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y +++ N L G GE+
Sbjct: 176 GVIGLRNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKVDLSRRNKLNSKKYGTKGEITEQ 235
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +WS AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+ +
Sbjct: 236 LALLLKAIWSCQYDPEMSTAFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATK 295
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K+S GRPD+ VA E NH N+S + VFQ Q++S+L CP C + S TFDPF
Sbjct: 296 KKYKIIKNSFGRPDDIVAAETLANHVRCNNSFVHAVFQAQFRSSLTCPRCHRQSNTFDPF 355
Query: 492 MYLTLPLPSTVTR-TMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKID 548
+ +++P+P + + V V Y + + V++ + ++L ILA T ID
Sbjct: 356 LCVSVPVPQNHRQMNLFVNVLYTSQQPRQVKIGVSVNQMANVRELREILASDTG----ID 411
Query: 549 EG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +LL EV++ R F + + +S I +++ + + + + I+ W
Sbjct: 412 ENHMLLTEVHDEGFHRTFSD-CQPLSVITENDPLYCIELPQLKEPTEQAYILLVW----I 466
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP 667
+ +KG R+ FG+P + E S D+ KLL L+ +S
Sbjct: 467 NILMKGDLRQRFGSPYTMQVSRE-TSYEDL----QKLL--LKEMHSVLAD---------- 509
Query: 668 EVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKP-------- 719
D L++S + + + D + + + D + P+ + I +
Sbjct: 510 ---DVLTSSQSPGLFNIRVADPAATPIQDEHPCIDPCVE--HPLYTEQIEQALALCADDS 564
Query: 720 -GKHIKVLLDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
+H+K++L+W DD ++ + + +K L + G A++L C
Sbjct: 565 GPQHVKLILEWDEATKCNIIQDDSDQIEEHASVKQLKTNSELG--------GAVTLEECF 616
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDT 827
D + E LG +D W+CP C + ++ KKL LW LPD+LV HLKRF + +KL
Sbjct: 617 DLYTRAEILGAEDAWHCPYCNKKQEVVKKLGLWSLPDILVIHLKRFRQQSKQRSTSKLTM 676
Query: 828 FVNFPILNLDLSKYMKSKDGESY------------------------------VYDLFAI 857
V+FP+ D++ ++ +++ VYDL+AI
Sbjct: 677 LVDFPLYGFDMTPHLAHNGVQTHNNVGSLGGLGWSPWKKPRPRQQNIPKYDENVYDLYAI 736
Query: 858 SNHYG-GLGGGHYTAYAK 874
NH+G L GGHYTA+ +
Sbjct: 737 CNHHGQDLQGGHYTAFCR 754
>gi|345787444|ref|XP_533832.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Canis lupus familiaris]
Length = 1222
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 436 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLL 495
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 496 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 555
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 556 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 615
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 616 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLDSLSQSVHVK-PENLRLAE 673
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 674 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 726
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 979 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1038
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1039 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1098
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1099 YGGMIGGHYTACARL 1113
>gi|301770391|ref|XP_002920596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Ailuropoda melanoleuca]
Length = 1222
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 436 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 495
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 496 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 555
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 556 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 615
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 616 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLESLSQSVHVK-SENLRLAE 673
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 674 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLPPELAKERVVVLEVQQRPQVPS 726
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 979 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1038
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1039 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1098
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1099 YGGMIGGHYTACARL 1113
>gi|395516301|ref|XP_003762329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Sarcophilus
harrisii]
Length = 1379
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 160/250 (64%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 550 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEAEINYSNPLGTGGRLAIGFAVLL 609
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 610 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 669
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+F GQYKS LVCPVCSKVSITFDPF+YL +
Sbjct: 670 TVDSDGRPDEVVAQEAWQRHKMRNDSFIVDLFHGQYKSKLVCPVCSKVSITFDPFLYLPV 729
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK-HGCCKDLILALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K + +++ +L+ + +K E L LAE
Sbjct: 730 PLPQK-QKVLTVYYFAKEPHKKPVKFLVSISKENSSAMEVLDSLAQSVHVK-PESLRLAE 787
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 788 VIKNRFHRVF 797
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L V + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1098 KELECVEDPSSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1157
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + D + YDL+A+ N
Sbjct: 1158 RLPNVLIIQLKRFSFRSFIWRDKINDMVEFPLRNLDLSKFCIGQKDDRQLPTYDLYAVIN 1217
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1218 HYGGMIGGHYTAYARL 1233
>gi|410951153|ref|XP_003982264.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Felis catus]
Length = 1222
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 436 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 495
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 496 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 555
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 556 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 615
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 616 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLESLSQSAHVK-PENLRLAE 673
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 674 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 726
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 979 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1038
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1039 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1098
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1099 YGGMIGGHYTACARL 1113
>gi|411147407|ref|NP_001258643.1| ubiquitin specific peptidase 19 [Sus scrofa]
Length = 1341
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 555 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 614
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 615 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 674
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 675 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 734
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 735 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLDSLSQSVHVK-PENLRLAE 792
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 793 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 845
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1098 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1157
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1158 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1217
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1218 YGGMIGGHYTACARL 1232
>gi|167533999|ref|XP_001748678.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772919|gb|EDQ86565.1| predicted protein [Monosiga brevicollis MX1]
Length = 1627
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 256/507 (50%), Gaps = 66/507 (13%)
Query: 89 PGPIDNSDIIQNGNGSSEGDD--LEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRK 146
PG IDN + + + S D +R ++ +D+V+V + W L WY GGP + R
Sbjct: 431 PGRIDNESLCLSAHRRSTRSDWGARLRPDVSVKKDFVIVSAEAWTALSAWYGGGPVISRP 490
Query: 147 MISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLS-----KKASTRQLYEKVCKLRGIE- 200
+++ VE+F + +K++ + L+ K + T Y + K+ +E
Sbjct: 491 LVANRQTASLEVELFPINVKVMHYAPVKAGRLALASDNDEKLSVTLLFYTDISKMETLES 550
Query: 201 -------------------QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
+ AR+WD+ N + L +D T+++A + +LLEV
Sbjct: 551 VTNTILRHKRDMTFERSNTKAAARLWDFKNPKHPIL-LSETDLTVEEAQITDGHTLLLEV 609
Query: 242 QVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM 301
+ +S S +A + + + +A P+ + HT +
Sbjct: 610 -CNADLSWPSEMLAVARSNLNSADDAHDVAMDPSTVDRHT----------------LLKS 652
Query: 302 DDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTEN 360
D G+ GL NLGNTC+MN+ALQCL HT L YF + E+N +N
Sbjct: 653 D---------------GITGLSNLGNTCYMNAALQCLNHTSPLKAYFEHYHHLAELNMDN 697
Query: 361 PLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
LG G +A +GDL+ +L S GR +VAP F+ + ++A +FSG QHDSQELLAF+LD
Sbjct: 698 VLGYQGIIAKRYGDLILQL-SEGRRSVAPVKFRAAVQKYAERFSGNQQHDSQELLAFVLD 756
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
LHEDLNRV +KPY+E KDS GRPD VA E W+NH ARN S++VD+F GQ +S + C
Sbjct: 757 ALHEDLNRVTEKPYVERKDSEGRPDAVVAAEHWQNHVARNRSIMVDLFHGQLRSEMRCKE 816
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC-KDLILAL 539
C S+TFDP TLPLPS + T+ + +GS P+ + + M+ GC ++ AL
Sbjct: 817 CGFASVTFDPASSWTLPLPSEGSSTVETLLHRLDGSA-PVKYALQ-MEPGCTYGEMRTAL 874
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFE 566
+ A L + ++LAE ++R E
Sbjct: 875 ARASGLS-ELQIILAETRQGLLYRVCE 900
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V LDW LY S + + ++ ++ +E +++ CL +F+ E + DD W
Sbjct: 1216 VALDWDSKAFHLYYQSQAEYQSLKDESVRELRSRAEEPVTMADCLKSFIKAEDMTKDDTW 1275
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKY 841
YC CKEHR A KKLD+W +P LV HLKRF L K + V P+ N D Y
Sbjct: 1276 YCSNCKEHRDAVKKLDIWSIPPFLVVHLKRFQQVNGLWRKSNKVVQVPLHNFDPWPY 1332
>gi|296474940|tpg|DAA17055.1| TPA: ubiquitin specific peptidase 19 [Bos taurus]
Length = 1238
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 452 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 511
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 512 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 571
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 572 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 631
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 632 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 689
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 690 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 742
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 995 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1054
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDL K+ + K+ + YDL+A+ NH
Sbjct: 1055 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCIGQKEEQLPSYDLYAVINH 1114
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1115 YGGMIGGHYTACARL 1129
>gi|119585361|gb|EAW64957.1| ubiquitin specific peptidase 19, isoform CRA_b [Homo sapiens]
Length = 1283
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 497 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 556
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 557 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 616
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 617 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 676
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 677 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 734
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 735 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 787
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1040 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1099
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1100 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1159
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1160 YGGMIGGHYTACARL 1174
>gi|148689349|gb|EDL21296.1| ubiquitin specific peptidase 19, isoform CRA_d [Mus musculus]
Length = 1338
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 552 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 611
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 612 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 671
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 672 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 731
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 732 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 789
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 790 VIKNRFHRVF 799
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1095 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1154
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1155 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1214
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1215 YGGMIGGHYTACARL 1229
>gi|268536766|ref|XP_002633518.1| Hypothetical protein CBG05381 [Caenorhabditis briggsae]
Length = 899
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 247/480 (51%), Gaps = 61/480 (12%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LKE +FLIS +W W +V V E GPIDNS I +
Sbjct: 43 LKENESWFLISQKW---WNAFV-----------------KSVRDGFIEDAGPIDNSQISE 82
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIV---NEK 156
G +++ L E DY +P+ +++L ++ G R I ++ N
Sbjct: 83 CRQGV-----FYLKQRLAEQIDYTTIPEDCFKELVRYF-GVDDERRDYIERQVIKKNNSL 136
Query: 157 RVEVFXLCLKLIDSRDNSQTVIRLSKKASTR-QLYEKVCKLRGIEQEKARIWDYFNKQRS 215
V+V+ + + +R+ + V + K T L ++V + + E I Y +
Sbjct: 137 SVDVYPRIIYIALARNRAMKVELILKPEDTMVTLRDRVIQELNL-NESDSIRFYVMNDEN 195
Query: 216 TSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPA 275
+D + D+ Q +L++V+ +NG N P +P SL G +
Sbjct: 196 PELIDTTQSI--DSYFDTVQKVLVDVE-ENGEFFFKNKN-----PTQPQSKSL--FGNQS 245
Query: 276 LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSAL 335
S G G+ G++ ++ T G GL NLGNTCFM SAL
Sbjct: 246 SSLG-----------GNGNGASNSYSYSSSSAHRTTP-----GACGLSNLGNTCFMASAL 289
Query: 336 QCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
QCL + P L YFL + Y+++IN ENPLG G LALA G+L++ +WS +++ PR FKG
Sbjct: 290 QCLSNVPPLRDYFLNNKYTEDINDENPLGTRGNLALAVGELMKGMWSGEYSSINPRKFKG 349
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR-PDEEVANECW 453
+ +FAP+F+GY Q D+ EL+A++LDGLHEDLNRVKQKPYI+ D + P+ E A + W
Sbjct: 350 IIGQFAPRFNGYTQQDAHELMAYMLDGLHEDLNRVKQKPYIQDNDEDQKLPEAEYAAKSW 409
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS--TVTRTMTVTVF 511
++K RNDS+IVD+ GQ +STLVCPVC VSI FDPF Y++LPLP+ + R + +F
Sbjct: 410 HSYKLRNDSIIVDLMHGQLRSTLVCPVCDTVSIKFDPFGYISLPLPAKEQIVRQTVIVMF 469
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
TV R+ + L LD + +E LG D WYCP+CK+H +ATK+LD+W LP++LV HL
Sbjct: 688 MTVSTRRK--VFLEETLDWYTKKEQLGEQDSWYCPKCKKHERATKQLDMWKLPEILVLHL 745
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
KRF Y+++ + KL V P+ LDL+ + + + E +YDL A+S HYG + GGHYTA
Sbjct: 746 KRFQYTKWSREKLTWEVVIPVRGLDLTNKIVNPNHEKAIYDLIAVSRHYGSMSGGHYTAA 805
Query: 873 A 873
A
Sbjct: 806 A 806
>gi|281338356|gb|EFB13940.1| hypothetical protein PANDA_009359 [Ailuropoda melanoleuca]
Length = 1359
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLESLSQSVHVK-SENLRLAE 773
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 774 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLPPELAKERVVVLEVQQRPQVPS 826
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|52078392|gb|AAH82241.1| USP19 protein, partial [Homo sapiens]
Length = 1179
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 393 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 452
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 453 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 512
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 513 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 572
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 573 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 630
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 631 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 683
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 936 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 995
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 996 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1055
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1056 YGGMIGGHYTACARL 1070
>gi|326679111|ref|XP_689922.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Danio rerio]
Length = 1526
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 166/271 (61%), Gaps = 5/271 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 677 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRGFESEINCNNPLGTGGRLAIGFAVLL 736
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 737 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 796
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GR DE VA E W+ HK RNDS IVD+FQGQYKS LVCP+CSKVSITFDPF+YL +
Sbjct: 797 TVDSDGRQDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPMCSKVSITFDPFLYLPV 856
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + +TV F P+ F V++ K +L ++S + +K E L L E
Sbjct: 857 PLPQK-QKVLTVFYFAKEPHKKPVKFLVSVSKESSSTAEVLESISRSVRIK-PENLRLTE 914
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
V + R F +P++ + ++ + + +
Sbjct: 915 VVKGRFHRIF-SPSQSLDTVSSSDLLFCFEM 944
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
KDL G + +R +L CL+ F E L P++ WYCP+C++HR+A+K+L LW
Sbjct: 1225 KDLEFDEDPGSATETSRAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLW 1284
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYMKSKDG---ESYVYDLFAIS 858
LP+VL+ LKRFS+ ++ ++K++ V+FP+ NLDLSK+ G + +YDL+A+
Sbjct: 1285 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGHKGDIQQPPIYDLYAVI 1344
Query: 859 NHYGGLGGGHYTAYAKV 875
NHYGG+ GGHYTAYA++
Sbjct: 1345 NHYGGMIGGHYTAYARL 1361
>gi|312596873|ref|NP_001186090.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Homo sapiens]
Length = 1384
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|119585359|gb|EAW64955.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
gi|119585360|gb|EAW64956.1| ubiquitin specific peptidase 19, isoform CRA_a [Homo sapiens]
Length = 1318
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|57529246|ref|NP_006668.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Homo sapiens]
gi|152031724|sp|O94966.2|UBP19_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19; AltName:
Full=Zinc finger MYND domain-containing protein 9
gi|148921559|gb|AAI46753.1| Ubiquitin specific peptidase 19 [Homo sapiens]
gi|168269530|dbj|BAG09892.1| ubiquitin carboxyl-terminal hydrolase 19 [synthetic construct]
Length = 1318
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|354500243|ref|XP_003512210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cricetulus griseus]
Length = 1300
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 514 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 573
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 574 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 633
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 634 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 693
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 694 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 751
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 752 VIKNRFHRVF-LPSHSLDAVSPTDMLLCFELLSPELAKERVVVLEVQQRPQVPS 804
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1057 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1116
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1117 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1176
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1177 YGGMIGGHYTACARL 1191
>gi|431913411|gb|ELK15086.1| Ubiquitin carboxyl-terminal hydrolase 19 [Pteropus alecto]
Length = 1394
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 539 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 598
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 599 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 658
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 659 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 718
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 719 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 776
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + ++ K + LE+ R Q S
Sbjct: 777 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSQELAKERVVVLEVQQRPQVPS 829
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 103/168 (61%), Gaps = 9/168 (5%)
Query: 714 DSILKPGKHIKVLLDWTDDVHELYDPSYI----KDLPVVHKTGFTVKKTRQEAISLFSCL 769
D+ L+ G + L W ++ P ++ K+L G + R +L CL
Sbjct: 1053 DTPLELGDDCSLALVWRNNERL---PEFVLVASKELECAEDPGSAGEAARAGHFTLDQCL 1109
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTF 828
+ F E L P++ WYCPQCK+HR+A+K+L LW LP+VL+ LKRFS+ ++ ++K++
Sbjct: 1110 NLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDL 1169
Query: 829 VNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
V FP+ NLDLSK+ + K+ + YDL+A+ +HYGG+ GGHYTA A++
Sbjct: 1170 VEFPVRNLDLSKFCIGQKEEQLPSYDLYAVISHYGGMIGGHYTACARL 1217
>gi|270265851|ref|NP_663382.2| ubiquitin carboxyl-terminal hydrolase 19 isoform 5 [Mus musculus]
Length = 1299
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 513 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 572
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 573 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 632
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 633 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 692
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 693 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 750
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 751 VIKNRFHRVF 760
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1056 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1115
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1116 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1175
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1176 YGGMIGGHYTACARL 1190
>gi|332215894|ref|XP_003257077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Nomascus leucogenys]
Length = 1384
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|402860151|ref|XP_003894498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Papio anubis]
Length = 1318
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|348581896|ref|XP_003476713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cavia porcellus]
Length = 1296
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 513 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 572
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 573 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 632
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 633 TVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 692
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 693 PLPQK-QKVLPIFYFAREPHCKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 750
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P++ + ++ + ++ + + K + LE+ R Q S
Sbjct: 751 VIKNRFHRVF-LPSQSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 803
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK HR+A+K+L LW
Sbjct: 1053 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKLHREASKQLLLW 1112
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1113 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1172
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1173 YGGMIGGHYTACARL 1187
>gi|402860145|ref|XP_003894495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Papio anubis]
Length = 1384
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|417413803|gb|JAA53213.1| Putative ubiquitin carboxyl-terminal hydrolase 19, partial
[Desmodus rotundus]
Length = 1377
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 591 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPLGTGGRLAIGFAVLL 650
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 651 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 710
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 711 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 770
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 771 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 828
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 829 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 881
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1134 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1193
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1194 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1253
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1254 YGGMIGGHYTACARL 1268
>gi|328353160|emb|CCA39558.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Komagataella
pastoris CBS 7435]
Length = 1202
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 314/642 (48%), Gaps = 106/642 (16%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSK 84
+RQ+VQ + + +KEG+++ L+ WY+ + + +P+ + I
Sbjct: 33 QRQVVQKMLDT--YTMKEGDVFCLVPKDWYQRFFTFTY--DPTDNEIFL----------- 77
Query: 85 RAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGP 141
+ G I+ ++++ + NG L + + E+ +Y ++P V+++L WY G
Sbjct: 78 ---KIGIINIAELL-DANG------LVKKPDGEDFVEYEILPYTVFQQLVSWYGLFSGLQ 127
Query: 142 ALPRKMISEGIVNEKRVEVF--XLCLKLIDSRDNSQTV--IRLSKKASTRQLYEKVCKLR 197
+ R +I+ E +EV+ L L+D+ NS + LS+ ++ R L +
Sbjct: 128 PIQRIVIARK-DGELELEVYPCYFRLHLMDNERNSLDINNFILSRYSTIRDLKYHATERF 186
Query: 198 GIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA 257
E +R+W + S PL ++ + + + L
Sbjct: 187 NTEFYHSRLWLVDDPNISNLPLTITVSSFEKIKFKK----------------------LL 224
Query: 258 LVPIEPSRSSLTIAGGPALSNGH-TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE- 315
+ IE +L AG L++ H Y+ + D + S T K +
Sbjct: 225 VEKIEDFDKTLEEAG---LNSCHLVVEYKLKK-------------DSEWPSDITCKPAKL 268
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
GL GL NLGNTC+MNSALQCL+H P+L+ YFL D Y +EIN +NPLG G LA+AFG
Sbjct: 269 STGLVGLTNLGNTCYMNSALQCLMHIPELSNYFLYDFYKEEINVDNPLGNGGRLAIAFGS 328
Query: 375 LLRKLWSSGRAAVA---PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
L+ + V P+ FK L RF F GY+Q DSQELLAFLLDGLHEDLNR+ +
Sbjct: 329 LIHTTLGPKKQIVTYATPKDFKLTLGRFNSMFLGYHQQDSQELLAFLLDGLHEDLNRILK 388
Query: 432 KPYI---EMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
KPY+ E+KD + E V A +CW HK RNDS+I D+F G YKSTLVCPVC K+S
Sbjct: 389 KPYLDKPELKDHLVQDKEAVRQLAEDCWSQHKMRNDSIITDLFVGLYKSTLVCPVCQKIS 448
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
ITFDPF LTLPLP V + + + +G P V L K L +S+ +
Sbjct: 449 ITFDPFNDLTLPLP--VDKKWYHQIIFFPETGYPKALDVELDKSSTFDHLKNYVSSKLQV 506
Query: 546 KIDEGLLLAEVYNHQIFRFFE--NP-------AELISSIKDDEHIVAYRFDRKQGGKIKL 596
I++ L+ A+++N Q ++ FE +P ++LISS + V Y+ K G + +
Sbjct: 507 PIND-LIGADIFNSQFYKNFEANDPDLNYLPISDLISS---GDKTVFYQVKHKPGDLV-V 561
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAP-LVTYLEEEHLSGADI 637
+ N + G K FG P L+T E+E S I
Sbjct: 562 PVFNTLSDDG------GRYAKPFGLPFLITISEDESFSFGSI 597
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 84/120 (70%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+++ + I+L CLD F E LG +D+WYCP CK+HRQATK +++W PD+L HLKR
Sbjct: 861 IEEKLNKNIALQECLDIFSKPELLGENDLWYCPNCKDHRQATKTIEIWKTPDILTIHLKR 920
Query: 815 FSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
F R +K+D V+FPI LD+S+Y+ + + +YDLFA+ NH+GGLGGGHYT+Y K
Sbjct: 921 FENQRSFSDKIDAVVDFPIEALDMSEYVVNPETGDEIYDLFAVDNHFGGLGGGHYTSYVK 980
>gi|148689347|gb|EDL21294.1| ubiquitin specific peptidase 19, isoform CRA_b [Mus musculus]
Length = 1361
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 538 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 597
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 598 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 657
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 658 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 717
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 718 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 775
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 776 VIKNRFHRVF 785
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1081 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1140
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1141 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1200
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1201 YGGMIGGHYTACARL 1215
>gi|387541264|gb|AFJ71259.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Macaca mulatta]
Length = 1318
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|332215900|ref|XP_003257080.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Nomascus leucogenys]
Length = 1318
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|312596875|ref|NP_001186091.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 3 [Homo sapiens]
Length = 1372
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 876
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|270265841|ref|NP_082080.3| ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Mus musculus]
gi|123791392|sp|Q3UJD6.1|UBP19_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|74138825|dbj|BAE27219.1| unnamed protein product [Mus musculus]
Length = 1360
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 775 VIKNRFHRVF 784
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1080 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1139
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1140 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1199
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1200 YGGMIGGHYTACARL 1214
>gi|410263404|gb|JAA19668.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296340|gb|JAA26770.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|38148678|gb|AAH60613.1| Ubiquitin specific peptidase 19 [Mus musculus]
Length = 1360
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 775 VIKNRFHRVF 784
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1080 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1139
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1140 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1199
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1200 YGGMIGGHYTACARL 1214
>gi|354500245|ref|XP_003512211.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Cricetulus griseus]
Length = 1323
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 775 VIKNRFHRVF-LPSHSLDAVSPTDMLLCFELLSPELAKERVVVLEVQQRPQVPS 827
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1080 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1139
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1140 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1199
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1200 YGGMIGGHYTACARL 1214
>gi|332215896|ref|XP_003257078.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Nomascus leucogenys]
Length = 1372
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 876
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|410263406|gb|JAA19669.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296342|gb|JAA26771.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 600 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 659
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 660 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 719
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 720 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 779
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 780 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 837
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 838 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 890
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1143 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1202
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1203 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1262
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1263 YGGMIGGHYTACARL 1277
>gi|402860147|ref|XP_003894496.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Papio anubis]
Length = 1372
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 876
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|332817139|ref|XP_003309900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1372
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 876
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|410225092|gb|JAA09765.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351349|gb|JAA42278.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1382
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|270265848|ref|NP_001161845.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 4 [Mus musculus]
Length = 1322
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 773
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 774 VIKNRFHRVF 783
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|332817137|ref|XP_003309899.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
gi|410263400|gb|JAA19666.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296336|gb|JAA26768.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|312596871|ref|NP_001186089.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Homo sapiens]
Length = 1419
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|410225088|gb|JAA09763.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351345|gb|JAA42276.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1384
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|194390786|dbj|BAG62152.1| unnamed protein product [Homo sapiens]
Length = 1372
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 876
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELGCAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|344275832|ref|XP_003409715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Loxodonta
africana]
Length = 1321
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 535 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 594
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 595 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 654
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 655 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCTKVSITFDPFLYLPV 714
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 715 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 772
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 773 VIKNRFHRMF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 825
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1078 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1137
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1138 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1197
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1198 YGGMIGGHYTACARL 1212
>gi|270265843|ref|NP_001161843.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Mus musculus]
gi|148689346|gb|EDL21293.1| ubiquitin specific peptidase 19, isoform CRA_a [Mus musculus]
Length = 1324
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 538 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 597
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 598 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 657
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 658 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 717
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 718 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 775
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 776 VIKNRFHRVF 785
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1081 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1140
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1141 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1200
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1201 YGGMIGGHYTACARL 1215
>gi|49022846|dbj|BAC65678.4| mKIAA0891 protein [Mus musculus]
Length = 1362
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 576 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 635
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 636 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 695
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 696 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 755
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 756 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 813
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 814 VIKNRFHRVF 823
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1119 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1178
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1179 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1238
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1239 YGGMIGGHYTACARL 1253
>gi|149018526|gb|EDL77167.1| rCG25629, isoform CRA_b [Rattus norvegicus]
Length = 1359
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAE 773
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 774 VIKNRFHRVF 783
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|410351351|gb|JAA42279.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1386
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 600 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 659
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 660 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 719
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 720 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 779
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 780 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 837
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 838 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 890
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1143 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1202
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1203 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1262
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1263 YGGMIGGHYTACARL 1277
>gi|397495158|ref|XP_003818427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
paniscus]
Length = 1318
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|148689348|gb|EDL21295.1| ubiquitin specific peptidase 19, isoform CRA_c [Mus musculus]
Length = 1399
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 576 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 635
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 636 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 695
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 696 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 755
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 756 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 813
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 814 VIKNRFHRVF 823
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1119 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1178
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1179 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1238
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1239 YGGMIGGHYTACARL 1253
>gi|149018525|gb|EDL77166.1| rCG25629, isoform CRA_a [Rattus norvegicus]
Length = 1322
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAE 773
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 774 VIKNRFHRVF 783
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|348581892|ref|XP_003476711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Cavia porcellus]
Length = 1321
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 538 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 597
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 598 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 657
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 658 TVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 717
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 718 PLPQK-QKVLPIFYFAREPHCKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 775
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P++ + ++ + ++ + + K + LE+ R Q S
Sbjct: 776 VIKNRFHRVF-LPSQSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 828
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK HR+A+K+L LW
Sbjct: 1078 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKLHREASKQLLLW 1137
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1138 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1197
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1198 YGGMIGGHYTACARL 1212
>gi|332817143|ref|XP_001160324.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2 [Pan
troglodytes]
Length = 1318
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|332215898|ref|XP_003257079.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Nomascus leucogenys]
Length = 1419
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|148745123|gb|AAI42728.1| USP19 protein [Homo sapiens]
Length = 1449
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 663 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 722
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 723 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 782
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 783 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 842
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 843 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 900
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 901 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 953
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1206 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1265
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1266 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1325
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1326 YGGMIGGHYTACARL 1340
>gi|48040522|ref|NP_001001516.1| ubiquitin carboxyl-terminal hydrolase 19 [Rattus norvegicus]
gi|81863791|sp|Q6J1Y9.1|UBP19_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; AltName: Full=Ubiquitin
thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|47525210|gb|AAT35219.1| ubiquitin specific protease 19 [Rattus norvegicus]
Length = 1357
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 534 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 593
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 594 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 653
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 654 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 713
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 714 PLPQK-QKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAE 771
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 772 VIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQVPS 824
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1077 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1136
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1137 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1196
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1197 YGGMIGGHYTACARL 1211
>gi|354500241|ref|XP_003512209.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Cricetulus griseus]
Length = 1361
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 538 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 597
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 598 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 657
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 658 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 717
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 718 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 775
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 776 VIKNRFHRVF-LPSHSLDAVSPTDMLLCFELLSPELAKERVVVLEVQQRPQVPS 828
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1081 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1140
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1141 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1200
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1201 YGGMIGGHYTACARL 1215
>gi|4240271|dbj|BAA74914.1| KIAA0891 protein [Homo sapiens]
Length = 1371
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 548 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 607
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 608 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 667
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 668 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 727
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 728 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 785
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 786 VIKNRFHRVFL-PSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 838
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1091 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1150
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1151 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1210
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1211 YGGMIGGHYTACARL 1225
>gi|426340514|ref|XP_004034174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1
[Gorilla gorilla gorilla]
Length = 1384
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|395856539|ref|XP_003800685.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Otolemur
garnettii]
Length = 1504
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 718 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 777
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 778 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 837
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 838 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 897
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 898 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 955
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 956 VIKNRFHRVFL-PSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 1008
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1261 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1320
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1321 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1380
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1381 YGGMIGGHYTACARL 1395
>gi|270265845|ref|NP_001161844.1| ubiquitin carboxyl-terminal hydrolase 19 isoform 3 [Mus musculus]
gi|74144320|dbj|BAE36025.1| unnamed protein product [Mus musculus]
Length = 1323
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 775 VIKNRFHRVF 784
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1080 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1139
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1140 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1199
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1200 YGGMIGGHYTACARL 1214
>gi|194378288|dbj|BAG57894.1| unnamed protein product [Homo sapiens]
Length = 1419
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|148744351|gb|AAI42661.1| USP19 protein [Homo sapiens]
Length = 1447
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 661 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 720
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 721 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 780
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 781 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 840
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 841 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 898
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 899 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQVPS 951
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1204 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1263
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1264 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1323
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1324 YGGMIGGHYTACARL 1338
>gi|426340520|ref|XP_004034177.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 4
[Gorilla gorilla gorilla]
Length = 1318
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSSELAKERVVVLEVQQRPQVPS 785
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1038 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1097
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1098 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1157
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1158 YGGMIGGHYTACARL 1172
>gi|397495156|ref|XP_003818426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 1 [Pan
paniscus]
Length = 1419
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|402860149|ref|XP_003894497.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Papio anubis]
Length = 1419
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|355746704|gb|EHH51318.1| hypothetical protein EGM_10672 [Macaca fascicularis]
Length = 1419
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|348581894|ref|XP_003476712.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Cavia porcellus]
Length = 1357
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHCKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P++ + ++ + ++ + + K + LE+ R Q S
Sbjct: 775 VIKNRFHRVF-LPSQSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 827
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK HR+A+K+L LW
Sbjct: 1077 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKLHREASKQLLLW 1136
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1137 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1196
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1197 YGGMIGGHYTACARL 1211
>gi|254571443|ref|XP_002492831.1| Ubiquitin carboxyl-terminal hydrolase [Komagataella pastoris GS115]
gi|238032629|emb|CAY70652.1| Ubiquitin carboxyl-terminal hydrolase [Komagataella pastoris GS115]
Length = 1146
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 211/642 (32%), Positives = 312/642 (48%), Gaps = 106/642 (16%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSK 84
+RQ+VQ + + +KEG+++ L+ WY +R+ DN F
Sbjct: 33 QRQVVQKMLDT--YTMKEGDVFCLVPKDWY---QRFFTFTYDPTDNEIF----------- 76
Query: 85 RAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGP 141
+ G I+ ++++ + NG L + + E+ +Y ++P V+++L WY G
Sbjct: 77 --LKIGIINIAELL-DANG------LVKKPDGEDFVEYEILPYTVFQQLVSWYGLFSGLQ 127
Query: 142 ALPRKMISEGIVNEKRVEVF--XLCLKLIDSRDNSQTV--IRLSKKASTRQLYEKVCKLR 197
+ R +I+ E +EV+ L L+D+ NS + LS+ ++ R L +
Sbjct: 128 PIQRIVIARK-DGELELEVYPCYFRLHLMDNERNSLDINNFILSRYSTIRDLKYHATERF 186
Query: 198 GIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLA 257
E +R+W + S PL ++ + + + L
Sbjct: 187 NTEFYHSRLWLVDDPNISNLPLTITVSSFEKIKFKK----------------------LL 224
Query: 258 LVPIEPSRSSLTIAGGPALSNGH-TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE- 315
+ IE +L AG L++ H Y+ + D + S T K +
Sbjct: 225 VEKIEDFDKTLEEAG---LNSCHLVVEYKLKK-------------DSEWPSDITCKPAKL 268
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
GL GL NLGNTC+MNSALQCL+H P+L+ YFL D Y +EIN +NPLG G LA+AFG
Sbjct: 269 STGLVGLTNLGNTCYMNSALQCLMHIPELSNYFLYDFYKEEINVDNPLGNGGRLAIAFGS 328
Query: 375 LLRKLWSSGRAAVA---PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
L+ + V P+ FK L RF F GY+Q DSQELLAFLLDGLHEDLNR+ +
Sbjct: 329 LIHTTLGPKKQIVTYATPKDFKLTLGRFNSMFLGYHQQDSQELLAFLLDGLHEDLNRILK 388
Query: 432 KPYI---EMKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
KPY+ E+KD + E V A +CW HK RNDS+I D+F G YKSTLVCPVC K+S
Sbjct: 389 KPYLDKPELKDHLVQDKEAVRQLAEDCWSQHKMRNDSIITDLFVGLYKSTLVCPVCQKIS 448
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
ITFDPF LTLPLP V + + + +G P V L K L +S+ +
Sbjct: 449 ITFDPFNDLTLPLP--VDKKWYHQIIFFPETGYPKALDVELDKSSTFDHLKNYVSSKLQV 506
Query: 546 KIDEGLLLAEVYNHQIFRFFE--NP-------AELISSIKDDEHIVAYRFDRKQGGKIKL 596
I++ L+ A+++N Q ++ FE +P ++LISS + V Y+ K G + +
Sbjct: 507 PIND-LIGADIFNSQFYKNFEANDPDLNYLPISDLISS---GDKTVFYQVKHKPGDLV-V 561
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAP-LVTYLEEEHLSGADI 637
+ N + G K FG P L+T E+E S I
Sbjct: 562 PVFNTLSDDG------GRYAKPFGLPFLITISEDESFSFGSI 597
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 84/120 (70%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+++ + I+L CLD F E LG +D+WYCP CK+HRQATK +++W PD+L HLKR
Sbjct: 861 IEEKLNKNIALQECLDIFSKPELLGENDLWYCPNCKDHRQATKTIEIWKTPDILTIHLKR 920
Query: 815 FSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
F R +K+D V+FPI LD+S+Y+ + + +YDLFA+ NH+GGLGGGHYT+Y K
Sbjct: 921 FENQRSFSDKIDAVVDFPIEALDMSEYVVNPETGDEIYDLFAVDNHFGGLGGGHYTSYVK 980
>gi|410263402|gb|JAA19667.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410296338|gb|JAA26769.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|359078367|ref|XP_002697125.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1469
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 683 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 742
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 743 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 802
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 803 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 862
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 863 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 920
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 921 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 973
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1226 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1285
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDL K+ + K+ + YDL+A+ NH
Sbjct: 1286 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCIGQKEEQLPSYDLYAVINH 1345
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1346 YGGMIGGHYTACARL 1360
>gi|410225090|gb|JAA09764.1| ubiquitin specific peptidase 19 [Pan troglodytes]
gi|410351347|gb|JAA42277.1| ubiquitin specific peptidase 19 [Pan troglodytes]
Length = 1421
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 598 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 657
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 658 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 717
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 718 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 777
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 778 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 835
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 836 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 888
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1141 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1200
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1201 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1260
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1261 YGGMIGGHYTACARL 1275
>gi|332817141|ref|XP_003309901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pan
troglodytes]
Length = 1419
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|440893719|gb|ELR46389.1| Ubiquitin carboxyl-terminal hydrolase 19 [Bos grunniens mutus]
Length = 1419
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 592 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 651
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 652 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 711
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 712 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 771
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 772 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 829
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 830 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 882
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1135 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1194
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDL K+ + K+ + YDL+A+ NH
Sbjct: 1195 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCIGQKEEQLPSYDLYAVINH 1254
Query: 861 YGGLGGGHYTAYAK 874
YGG+ GGHYTA A+
Sbjct: 1255 YGGMIGGHYTASAR 1268
>gi|426340516|ref|XP_004034175.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 2
[Gorilla gorilla gorilla]
Length = 1372
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 586 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 645
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 646 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 705
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 706 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 765
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 766 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 823
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 824 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSSELAKERVVVLEVQQRPQVPS 876
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1129 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1188
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1189 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1248
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1249 YGGMIGGHYTACARL 1263
>gi|355559647|gb|EHH16375.1| hypothetical protein EGK_11647 [Macaca mulatta]
Length = 1419
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|403335950|gb|EJY67162.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1162
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 271/519 (52%), Gaps = 59/519 (11%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
EE ++V+++ D + G+ ++L+S W + W+RY D D ++ + VS
Sbjct: 206 EEAKMVKEMLEDMDNLVTPGSTWYLLSMDWVKKWQRYTYYDYLEPDQMAEEE-----VSE 260
Query: 84 K-RAERPGPIDNSDIIQNGNG---------SSEGDDLEVRRNLEEGQDYVLVPQQVWEKL 133
K R PGP++NS I+ + S + + ++ NL+EG DY+LV ++++ L
Sbjct: 261 KERNTPPGPLNNSSILATLDKTRTILEEMQSKKWMNSHLKPNLKEGVDYMLVSLEIFDFL 320
Query: 134 FCWYKGGPA--LPRKMISEGIVN--EKRVEV------FXL---------CLKL--IDSRD 172
Y P + R IS G N E +EV F L C+K + +D
Sbjct: 321 LKKYNCLPGHEVKRMGISVGEENMGEGLLEVNFRPINFVLIPNNLTKFECVKTLYVSRKD 380
Query: 173 NSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWD-YFNKQRSTSPLD-----VSDQTL 226
V + ++A +L++K K R + RIW F+K+ ++ + +
Sbjct: 381 KLIDVRKALQRAINMRLFQK--KERSLIVNNMRIWKCNFSKEEEYEAIEKKYKNYTQVKV 438
Query: 227 DDAMLQ---MDQDILLEVQVDNGISMDSTGNDLALVPIEPS---RSSLTIAGGPALSNGH 280
D L D+D+L+E ++ D+ ++ + + + + I N
Sbjct: 439 DGKCLNPRPEDEDVLIE-------DVELAEEDVIVIELPKTLKPETYIFIPQNDEERNQF 491
Query: 281 TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVH 340
Y N+ P + + D K + G+ GLQNLGNTCFMNS LQCL +
Sbjct: 492 EQDYT-NKTPDIDYVPPTLQEIQTRDLEAIMKPSSRRGVTGLQNLGNTCFMNSGLQCLSN 550
Query: 341 TPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
T +L +YF + + +IN +NPLGM G+LAL +G+L++++W SG A AP K + +
Sbjct: 551 TIELTKYFCNNMHKQDINKDNPLGMKGQLALTYGELIKEMWMSGSARTAPHELKKVVGKR 610
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKAR 459
+FSG+ Q DS EL+ +++D +HEDLNRVK+KPY+EM+DS GRPD+EVA E W AR
Sbjct: 611 VTKFSGFGQQDSCELINYVIDLMHEDLNRVKKKPYVEMQDSNGRPDQEVAQEHWDAFIAR 670
Query: 460 NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
N S+IVD+ GQYKST+ C C +SITFDPF+ L++P+
Sbjct: 671 NRSIIVDLMYGQYKSTVQCQECGFISITFDPFLTLSVPI 709
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 21/139 (15%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
++K +++ I+L +CL A+ EE L D WYC +CKE R KKL+L+ LP +L+ LKR
Sbjct: 987 MQKKKKDLITLDTCLKAYSREELLTGQDQWYCKECKEQRDIHKKLELYKLPKILIIQLKR 1046
Query: 815 FSYSRYLKN------------------KLDTFVNFPILNLDLSKYM--KSKDGESYVYDL 854
F R N K+ V+FP+ LDL ++ S D Y YDL
Sbjct: 1047 FQSKRGAGNSKQGGFMAMAMAQVLHQEKVSELVDFPVEGLDLRPFIIDDSTDTPIY-YDL 1105
Query: 855 FAISNHYGGLGGGHYTAYA 873
+A+SNHYG L GGHYTAYA
Sbjct: 1106 YAVSNHYGSLNGGHYTAYA 1124
>gi|344254380|gb|EGW10484.1| Ubiquitin carboxyl-terminal hydrolase 19 [Cricetulus griseus]
Length = 1357
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 571 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 630
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 631 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 690
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 691 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 750
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 751 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 808
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 809 VIKNRFHRVFL-PSHSLDAVSPTDMLLCFELLSPELAKERVVVLEVQQRPQVPS 861
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1114 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1173
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1174 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1233
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1234 YGGMIGGHYTACARL 1248
>gi|195999830|ref|XP_002109783.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
gi|190587907|gb|EDV27949.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
Length = 921
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 288/625 (46%), Gaps = 97/625 (15%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENP---LGMHGELA 369
G+ G++GL+N GNTCFMN+ +QCL +T LA+YF LG+Y ++ L +GEL
Sbjct: 165 GKVPGVSGLRNHGNTCFMNAIVQCLCNTDSLAKYFVLGEYKMDVKRRKKSKNLTTNGELT 224
Query: 370 LAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
LL+ +W+ A FK + ++ Q+ G NQHD+QE L +LLD +HEDLNR
Sbjct: 225 EQIAVLLKGMWTCRYDAQMSSDFKAVVGKYCSQYRGSNQHDAQEFLLWLLDKIHEDLNRA 284
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
+ Y KDS GRP E VA E N+ NDS ++D FQ +S+L CP C++ S TFD
Sbjct: 285 VKSKYKATKDSVGRPVEAVAAEVLANYCRCNDSFVLDTFQAYLRSSLTCPSCNQQSNTFD 344
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PF+ ++LPL TR ++ TV Y + F V + L S +K E
Sbjct: 345 PFLCVSLPLLQRDTRFVSATVVYYDLLKQCCRFGVDISPDETVDSLCKIFSQQTNIK-PE 403
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR-------- 601
+L+A V + I R + +L+ I ++ Y + +E +R
Sbjct: 404 LMLVASVDYYGIRRLLSSK-DLVMDISSND--TCYIMELPNCIDDAMETTDRANIAPKAT 460
Query: 602 ---WQEKSASDYL---------KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPL- 648
+QE + S+ + G FG P V + ++S D+ A+ + +S
Sbjct: 461 EETYQEVNNSETIAIVIINRRGSGYTATRFGRP-VAFRCHRNISYEDLAKAILRKISETL 519
Query: 649 --RRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLC-SRELSFQLSLTDERI 705
R Y + + P L N+ T +L L + E Q + D +
Sbjct: 520 TERINYEYSNDN--------PPFALRLVNA------TKDLGLLNQTDEYPLQNQIIDRAL 565
Query: 706 SSCKPIQKDSILKPGKHIKVLLDW------TDDVHELYDPSYIK------------DLPV 747
S CK HI+++++W D++ L+ ++I+ D+ V
Sbjct: 566 SVCKNCP--------SHIELMIEWDAEMKDKDELINLFSETHIRIIGCVIEEKPIEDITV 617
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQC-KEHRQATKKLDLWMLPD 806
K F +I+L+ CL + EE L D W C C K R TK L +W LP+
Sbjct: 618 AEKGNF------PSSITLYDCLKIYTKEEKLCEDSEWNCSACHKVQRGITKTLSMWTLPE 671
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG-----------------ES 849
V++ HLKRF KL V+FPI+ LD+S ++ D +S
Sbjct: 672 VMIVHLKRFKQIGAHFTKLHDIVSFPIVGLDMSDFIGRPDSDDMHSYGSYRNQRDFRHQS 731
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+A+ NH+G +G GHYTA +
Sbjct: 732 SIYDLYAVCNHHGNMGSGHYTACCR 756
>gi|426249944|ref|XP_004018706.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Ovis aries]
Length = 1269
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 485 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 544
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 545 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 604
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 605 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 664
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 665 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 722
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 723 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 775
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1034 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1093
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDL K+ + K+ + YDL+A+ NH
Sbjct: 1094 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCIGQKEEQLPSYDLYAVINH 1153
Query: 861 YGGLGGGHYTA 871
YGG+ GGHYTA
Sbjct: 1154 YGGMIGGHYTA 1164
>gi|28436934|gb|AAH46824.1| Usp19 protein, partial [Mus musculus]
Length = 929
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 143 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 202
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 203 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 262
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 263 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 322
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 323 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 380
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 381 VIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQVPS 433
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 686 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 745
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 746 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 805
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 806 YGGMIGGHYTACARL 820
>gi|297285805|ref|XP_002802845.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like, partial
[Macaca mulatta]
Length = 1394
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 685 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 744
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 745 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 804
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 805 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 864
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 865 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVRVK-PENLRLAE 922
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 923 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 975
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1151 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1210
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1211 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1270
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1271 YGGMIGGHYTACARL 1285
>gi|351711877|gb|EHB14796.1| Ubiquitin carboxyl-terminal hydrolase 19 [Heterocephalus glaber]
Length = 1394
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 177/294 (60%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 543 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 602
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 603 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 662
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 663 TVDSDGRPDEVVAAEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 722
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 723 PLPQK-QKVLPIFYFAREPHCKPIKFLVSVSKENSSASEVLDSLSESVHVK-PENLRLAE 780
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P++ + ++ + ++ + + K + LE+ R Q S
Sbjct: 781 VIKNRFHRVF-LPSQSLDTVSPSDILLCFELLSPELAKERVVVLEVQQRPQVPS 833
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1083 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1142
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1143 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1202
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1203 YGGMIGGHYTACARL 1217
>gi|426340518|ref|XP_004034176.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 isoform 3
[Gorilla gorilla gorilla]
Length = 1419
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 596 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 655
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 656 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 715
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 716 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 775
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 776 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 833
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 834 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSSELAKERVVVLEVQQRPQVPS 886
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1139 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1198
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1199 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1258
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1259 YGGMIGGHYTACARL 1273
>gi|358418211|ref|XP_592460.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Bos taurus]
Length = 1467
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 681 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 740
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 741 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 800
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 801 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 860
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 861 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 918
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 919 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 971
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1224 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1283
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDL K+ + K+ + YDL+A+ NH
Sbjct: 1284 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLGKFCIGQKEEQLPSYDLYAVINH 1343
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1344 YGGMIGGHYTACARL 1358
>gi|405970379|gb|EKC35288.1| Ubiquitin carboxyl-terminal hydrolase 19 [Crassostrea gigas]
Length = 1310
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 174/284 (61%), Gaps = 3/284 (1%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNS LQ L +T + YFL + ++INT+NPLGM G+LA+++
Sbjct: 389 RPGMTGLDNLGNTCFMNSVLQALSNTTEFRDYFLESRFQNDINTDNPLGMGGKLAVSYAV 448
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LLR LWS + AP K + + A QF+G+ QHD+QE +AF LDGLHEDLNR+K+KPY
Sbjct: 449 LLRTLWSGKHYSYAPSKLKSLVGQKASQFNGFAQHDAQEFMAFFLDGLHEDLNRIKKKPY 508
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
E DS GR DE VA+E W+ +K RNDS IVD+FQGQYKS L CPVC K+SITFDPF+YL
Sbjct: 509 TETVDSDGRSDEVVADEAWEMYKKRNDSFIVDLFQGQYKSKLTCPVCGKISITFDPFLYL 568
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
+LPLP R + V + P+ + L K + L + +K + +
Sbjct: 569 SLPLPKK-KRMLPVIFMWKEPYKKPLQLVLRLPKECTTEALKEEAAKKTGVK-PSAMRVF 626
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEI 598
E Y +I++F+ ++L + D I++ G+ EI
Sbjct: 627 ETYKGKIYKFYGKGSDLSAVQSGDTIIISEVLTEDIAGEPVHEI 670
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 96/156 (61%), Gaps = 10/156 (6%)
Query: 727 LDWTDDVHELYDPSYI----KDLPVVHKTGFTVKKTRQEA-ISLFSCLDAFLTEEPLGPD 781
+DW + HE YD SY+ K+L T + T + +++ C+D F E L P+
Sbjct: 992 IDWKN--HEKYD-SYVLVQTKELEYTEDPTLTAQYTEETGNVNIQQCMDLFTEPEILSPE 1048
Query: 782 DMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSK 840
+ WYCP CKEHR+ATK++ +W LP L+ LKRFS+ ++ ++K+D V FP+ LDLS
Sbjct: 1049 EAWYCPSCKEHREATKQMSIWRLPHTLIIQLKRFSFRNFIWRDKIDKMVEFPVRGLDLSP 1108
Query: 841 YMK-SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
Y K D VYDL+A+ NHYGG+ GGHYT++ +
Sbjct: 1109 YTKIGADKSPPVYDLYAVVNHYGGILGGHYTSFVRT 1144
>gi|410898910|ref|XP_003962940.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Takifugu
rubripes]
Length = 1589
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 174/289 (60%), Gaps = 4/289 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YFL + EIN NPLG G LA+ F LL
Sbjct: 745 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFLDRGFEAEINCSNPLGTGGRLAIGFAVLL 804
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 805 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 864
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GR DE VA+E W+ HK RNDS IVD+FQGQ+KS LVCP+CSKVSITFDPF+YL +
Sbjct: 865 TVDSDGRLDEVVADEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLPV 924
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + ++V F P+ F+V++ K +L + E L LAEV
Sbjct: 925 PLPQK-QKVLSVYYFAKEPHKKPIKFSVSVSKENSRTAEVLESISRNVRVKPENLRLAEV 983
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEK 605
++ R F P+ + ++ + + + K+ K ++ + R Q+K
Sbjct: 984 GKNRFQRMFL-PSHSLDTVTSTDMLFCFELLSKEMAKERV-VFLRVQQK 1030
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 88/121 (72%), Gaps = 4/121 (3%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R SL CL+ F E L P++ WYCP+C++HR+A+K+L LW LP+VL+ LKRFS+
Sbjct: 1353 RAGHFSLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFR 1412
Query: 819 RYL-KNKLDTFVNFPILNLDLSKY---MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++ ++K++ V+FPI NLDLSK+ MK + + +YDL+A+ NHYGG+ GGHYTAYA+
Sbjct: 1413 SFIWRDKINDMVDFPIRNLDLSKFCIGMKDEMQQPPIYDLYAVINHYGGMIGGHYTAYAR 1472
Query: 875 V 875
+
Sbjct: 1473 L 1473
>gi|395733810|ref|XP_002813806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Pongo abelii]
Length = 1411
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 175/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 588 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 647
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 648 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 707
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 708 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 767
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS +K E L LAE
Sbjct: 768 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSTASEVLDSLSQNVHVK-PENLRLAE 825
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 826 VIKNRFHRVF-LPSHSLDTVSPSDMLLCFELLSSELAKERVVVLEVQQRPQVPS 878
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1131 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1190
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1191 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1250
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1251 YGGMIGGHYTACARL 1265
>gi|403291358|ref|XP_003936762.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Saimiri
boliviensis boliviensis]
Length = 1482
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 696 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 755
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 756 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 815
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 816 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 875
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 876 PLPQK-QKVLPVFYFAREPHSKPVKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 933
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 934 VIKNRFQRVFL-PSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 986
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1239 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1298
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1299 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLSSYDLYAVINH 1358
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1359 YGGMIGGHYTACARL 1373
>gi|390475153|ref|XP_003734910.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 [Callithrix jacchus]
Length = 1489
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 703 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 762
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 763 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 822
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 823 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 882
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 883 PLPQK-QKVLPVFYFAREPHSKPVKFLVSISKENSTASEVLDSLSQSVHVK-PENLRLAE 940
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 941 VIKNRFQRVFL-PSHSLDTVSPSDMLLCFELLSPELAKERVVVLEVQQRPQVPS 993
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1246 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1305
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1306 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPNYDLYAVINH 1365
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1366 YGGMIGGHYTACARL 1380
>gi|345320897|ref|XP_003430360.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19-like [Ornithorhynchus anatinus]
Length = 1385
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 167/269 (62%), Gaps = 5/269 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 542 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFEMEINYSNPLGTGGRLAIGFAGLL 601
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 602 RTLWKGTHHAFQPSKLKAIVAGKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 661
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS +VD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 662 TVDSDGRPDEVVAEEAWQRHKMRNDSFVVDLFQGQYKSKLVCPVCTKVSITFDPFLYLPV 721
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +L+ + +K E L LAE
Sbjct: 722 PLPQK-QKVLIVYYFAKEPHKKPVKFLVSISKENSSAMEVLDSLAHSVHVK-PENLRLAE 779
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAY 584
V ++ R F P+ + +I + ++ +
Sbjct: 780 VSKNRFHRIF-LPSHSLDAISPSDPLLCF 807
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L + G + R +L CL+ F E L P++ WYCP+CK+HR+A+K+L LW
Sbjct: 1102 KELEYMEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLW 1161
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISN 859
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + D + YDL+A+ N
Sbjct: 1162 RLPNVLIIQLKRFSFRSFIWRDKINDMVEFPVRNLDLSKFCIGQKDDHQLPTYDLYAVIN 1221
Query: 860 HYGGLGGGHYTAYAKV 875
HYGG+ GGHYTAYA++
Sbjct: 1222 HYGGMIGGHYTAYARL 1237
>gi|74179058|dbj|BAE42739.1| unnamed protein product [Mus musculus]
Length = 1322
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 157/250 (62%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE V E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVTEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 773
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 774 VIKNRFHRVF 783
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|355727922|gb|AES09355.1| ubiquitin specific peptidase 19 [Mustela putorius furo]
Length = 1009
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 175/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 261 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 320
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 321 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 380
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+ L +
Sbjct: 381 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLSLPV 440
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 441 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLDSLSQSVHVK-PENLRLAE 498
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 499 VIKNRFHRVFL-PSHSLDTVSPSDTLLCFELLSPELAKERVVVLEVQQRPQVPS 551
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 3/165 (1%)
Query: 714 DSILKPGKHIKVLLDWTDDVH-ELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAF 772
DS L+ G+ + L W ++ + + K+L G + R +L CL+ F
Sbjct: 774 DSPLELGEDCSLALVWRNNERLQEFVLVASKELECAEDPGSAGEAARAGHFTLDQCLNLF 833
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTFVNF 831
E L P++ WYCPQCK+HR+A+K+L LW LP+VL+ LKRFS+ ++ ++K++ V F
Sbjct: 834 TRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDLVEF 893
Query: 832 PILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
P+ NLDLSK+ + K+ + YDL+A+ NHYGG+ GGHYTA A++
Sbjct: 894 PVRNLDLSKFCIGQKEEQLPSYDLYAVINHYGGMIGGHYTACARL 938
>gi|328869101|gb|EGG17479.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 1075
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 180/303 (59%), Gaps = 22/303 (7%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS+LQCL HT +YFL G Y +IN NPLGM G++A FG L+
Sbjct: 400 GACGLTNLGNTCFMNSSLQCLAHTTPFVEYFLTGKYIGDINKVNPLGMKGQIAEHFGKLM 459
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ +WS G+ VAP+ K + ++APQFSG +Q DSQELL+FLLDGLHEDLN+V +KPYIE
Sbjct: 460 KDMWS-GQTNVAPKNLKWIIGKYAPQFSGISQQDSQELLSFLLDGLHEDLNKVLKKPYIE 518
Query: 437 MKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
K+ R D VA+E W N+ RN S++V++FQGQYKSTL C C KVS+TFD FMY+
Sbjct: 519 EKEDTNEVREDSVVASEQWDNYLKRNQSVVVNLFQGQYKSTLNCSRCPKVSVTFDTFMYV 578
Query: 495 TLPLPSTVTRTMTVTVFYANGSGL----------------PMPFTVTLMKHGCCKDLILA 538
TLP+P R V +F +G P+ + + L K L
Sbjct: 579 TLPIPVPTERVFEVLLFRCKPTGTVGPDPKGIYCLNNAMDPVRYCLKLNKRDYINSLRNE 638
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEI 598
LS C + L LAE+YN++I F + L S IKD + +AY +L +
Sbjct: 639 LSKTCGVDT-PCLALAEIYNNRINTFLSDQKNL-SFIKDRDITIAYELPVAGDSYSRLHV 696
Query: 599 VNR 601
++R
Sbjct: 697 IHR 699
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 725 VLLDWTDDVHE-LYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
V +DW ++ + L D ++ P V T+KK + I+L CL F +E LGP+D
Sbjct: 872 VTIDWRPEIFKYLCDSEILEGSPFVKDDASVTIKKDMRSEINLNDCLSLFTKKEKLGPND 931
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
W+CPQCK+H + KKL+LW LP +L+ HLKRF + + K+ ++V+FP+ N DLSK++
Sbjct: 932 TWFCPQCKQHNEGDKKLELWSLPKILIIHLKRFHF-HHRHEKILSYVDFPLDNFDLSKWV 990
Query: 843 KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SK +Y L+A+SNH GG+G GHYTA K
Sbjct: 991 LSKTDIPPIYQLYAVSNHMGGMGAGHYTASIK 1022
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 39 DLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKR------------- 85
++ G +LIS RW W+ +V D+ S + S +S G +
Sbjct: 96 EVSAGETVYLISARWLGHWKSWVKYDDGSPKS-SVNSDLYKGTPAAAAAAAGMINLKLSA 154
Query: 86 ---AERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
+P I+N DII + + E + N E DY ++ Q++WE L WY GGPA
Sbjct: 155 EFDVPKPESINNKDIIASMDSEKEPI---LAENKVERDDYEIINQRIWELLVQWYGGGPA 211
Query: 143 LPRKMISEGIVNEKR 157
+ R ++ G+ N+ R
Sbjct: 212 IKRSVVVLGLKNDNR 226
>gi|378731406|gb|EHY57865.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 1511
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 293/627 (46%), Gaps = 112/627 (17%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWY-RSWERYVCGDEPSIDNISFDSPHMNG 80
P + QIV+ + + +L+EG +++S +W R R E S FD G
Sbjct: 110 PSIDEQIVK-VTQLAQQELQEGQKGYVVSGKWLQRVQSRGSVAGEAS----KFDKSATEG 164
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLF 134
GPIDNSDI S+ D + +R L G+DY ++PQ+ W+ +
Sbjct: 165 -------EIGPIDNSDIAMVIEESTRLLDEAGEPYVPLRPGLTMGEDYEVLPQEAWDLIV 217
Query: 135 CWY---KGGPALPRKM--ISE-----GIVNEKRVEVFXLCLKLIDSRDNSQTV------- 177
WY K P + R SE + E +F LK + S +QT
Sbjct: 218 SWYGVAKDSPIITRYAHDWSEPDALPNVTWELSPPIFSF-LK-VPSEHTTQTQREKDLPP 275
Query: 178 --IRLSKKASTRQLYEKVCKLRGIEQE-KARIWDYFN--------------KQRSTSPLD 220
+ SKK + + ++ +L GI+ K R+W RS SP
Sbjct: 276 QRLLASKKENINEWLKEGKRLLGIDNNTKVRVWRVLGGLKSSGNSGVLTPAASRSASPAP 335
Query: 221 VSD--QTLDDAMLQMDQDILLEVQVD-----------------NGISMDST---GNDLAL 258
++ + D ML +D + + +Q+ NG S ST G D +
Sbjct: 336 GAEIIASAGDKML-LDVNTFVHLQIGEQRELLNAPDHTANPKYNGKSTLSTVGLGRDEVI 394
Query: 259 V-----------PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
V P E + SL A A N ++G R + PG M G
Sbjct: 395 VLEEQKSGKDEWPSENPKLSLGKALKTAPKNLASSG-RSSPAPGM--------MTRG--- 442
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHG 366
+ G G+ GL NLGNTC+MNSALQCL +L QYFL DY ++N EN LG HG
Sbjct: 443 -RQKRDGRPRGITGLSNLGNTCYMNSALQCLRSVEELTQYFLHDYWKQDLNVENALGHHG 501
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
E+A A+ +LL +++ ++ P FK + ++ P FSGY Q DSQE L FLLDGL EDL
Sbjct: 502 EVAKAYANLLHQIYDENASSTNPSRFKAIIGKYGPSFSGYQQQDSQEFLLFLLDGLQEDL 561
Query: 427 NRVKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
NR+ +KPYIE DS +E A++ W+ +KARNDS++ D+F G YKSTL CPV
Sbjct: 562 NRIHKKPYIEKPDSTDDMVHDTAALKEFADKNWEIYKARNDSVVTDLFAGMYKSTLTCPV 621
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + + Y P+ V + KH K L ++
Sbjct: 622 CHKVSIIFDPFNNLTLQLP--IENNWQKEILYFPLHKRPIRIDVDIDKHSSIKGLKEFVA 679
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFEN 567
+ + +D LL+AE Y ++I++ F+N
Sbjct: 680 SRTHVDVDR-LLVAEAYKNKIYKIFDN 705
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 20/182 (10%)
Query: 711 IQKDSILKPGKHIKVLLDWTDDV------------HELYDPSYIKDLPVVHKTGFTVKKT 758
++ D +++PG+ I +LDW+ + E+ K + + H ++
Sbjct: 1056 VKSDDLIRPGEAI--VLDWSQEAWDALFGGAEQENAEMRGAPTWKSVELFHDEELQARRV 1113
Query: 759 R-----QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
R + ISL CL+ F E L + WYCP+CKEHR+A K +LW PD+LV HLK
Sbjct: 1114 RRSNRKKNGISLEDCLNEFGKPETLSEQNAWYCPRCKEHRRAEKMFELWKAPDILVMHLK 1173
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++KL+ V++P+ LDLS ++ +DG+S +YDL A+ NHYGGLGGGHYTAY
Sbjct: 1174 RFSSNRNFRDKLEVKVDYPVEGLDLSAMVRDQQDGKSLIYDLIAVDNHYGGLGGGHYTAY 1233
Query: 873 AK 874
AK
Sbjct: 1234 AK 1235
>gi|338714694|ref|XP_001498305.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 isoform 1 [Equus caballus]
Length = 1404
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 157/250 (62%), Gaps = 4/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 618 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 677
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 678 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 737
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 738 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 797
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L ++S + +K E L L E
Sbjct: 798 PLPQK-QKVLPVFYFAREPHSKPIKFLVSISKENSSASEVLDSISQSVHVK-PENLRLTE 855
Query: 556 VYNHQIFRFF 565
V ++ R F
Sbjct: 856 VIKNRFHRVF 865
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1161 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1220
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1221 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 1280
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1281 YGGMIGGHYTACARL 1295
>gi|328857175|gb|EGG06293.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 1423
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 302/633 (47%), Gaps = 113/633 (17%)
Query: 33 KNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPI 92
++ S+L L ++LIS RW++ W+ + N + P +S ++ GPI
Sbjct: 165 QSTSNLSLDATQTWYLISLRWFKRWQTACATHQAPTKN--SEDPSETPIS---IDQLGPI 219
Query: 93 DNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK--GGP--ALPRKMI 148
DNSD++ + +++ L+ D ++ + W L WY GP +PR++I
Sbjct: 220 DNSDLLDS--------QFDLKPGLQLSVDLEILAEPFWNSLLSWYGIIQGPRAIIPRRVI 271
Query: 149 SEGIVNEKRVEV------FXLCLKLIDSRDNSQTV-------IRLSKKASTRQLYEKVCK 195
+ + +E F L + + S + S V IR S + QL ++ +
Sbjct: 272 APNGPGSQTIEFYPPRFHFYLLISELASDECSLVVPNSTPVQIRYSIANTLAQLKTQLVQ 331
Query: 196 --LRGIEQEKARIWDYFNKQRSTSPLDV----------------SDQT-LDDAMLQMDQD 236
I R+W N S L + SDQ L++A+L ++
Sbjct: 332 DLFDPILSRPLRLWRLSNPPSQPSILTLNLQDFSNLLPEPINPESDQIDLNEALLTDPEN 391
Query: 237 -ILLEVQVDNG----ISMDSTGNDLALVPIEPSRSSLTIAGG-----------------P 274
+++E Q D+G I D + D + ++S+++ GG P
Sbjct: 392 YLVIEQQTDDGNWLYIKSDQSPPDQDVFD---QQTSISVFGGEPWLDQMDRMNNINKLDP 448
Query: 275 ALSNGHTTGYRFNQYPG----------SSFGSTFMD-------MDDGYDSYNTAKKGEKG 317
G T Q PG SS G + + D K G
Sbjct: 449 KYKEGPITTL---QSPGPDASVQKTSSSSTGGGIISQLKRAAGLGGTNDQNQLLKPGMVR 505
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GL NLGNTCFMNSALQC+ + P+L QYFL Y +E+N NPLGM G++A FG L+
Sbjct: 506 GLVGLSNLGNTCFMNSALQCMSNCPELKQYFLSRVYINELNRVNPLGMGGKVAETFGQLI 565
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
KLW S+ +++APR FK + RF F GY Q DSQELL FLLD LHEDLNRV +KP+
Sbjct: 566 EKLWNSTPHSSIAPREFKSIVGRFNSLFLGYGQQDSQELLTFLLDALHEDLNRVLKKPFD 625
Query: 436 EMKD-SGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
E+ D G D E+ A CW ++ RNDS+IVD+FQGQYKSTLVCP C KV+I FD
Sbjct: 626 EIPDFKDGDGDLELIKLAETCWNLYRRRNDSVIVDLFQGQYKSTLVCPDCQKVAIKFDEI 685
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK--HGCCKDLILALSTACCLKI-- 547
MYLTL LP V + TVF+ +P+ T +K + KD + KI
Sbjct: 686 MYLTLQLP--VNKKQRGTVFF-----IPLDHTKPRLKVVYELPKDSTIRQVKQHIGKILG 738
Query: 548 --DEGLLLAEVYNHQIFRFFENPAELISSIKDD 578
E + + E ++ + ++ +++P +L + ++ D
Sbjct: 739 YDPEKMAVIEDWSAKPWKIWQDPDQLDAILERD 771
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 32/153 (20%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
++KK+ ++ +++ C F E LG +DMWYCP+C++H QA K + +W +PD+LV H K
Sbjct: 1068 SLKKSDKKQLTIEDCFKDFSKPERLGEEDMWYCPRCQKHVQAIKTMQIWKVPDILVVHFK 1127
Query: 814 RFSYSRYL---KNKLDTFVNFPILNLDLS---------KYMKSKDGE------------- 848
RFS +R K+D FV FPI LDLS + +K++ E
Sbjct: 1128 RFSNARTAYGRSTKVDAFVEFPIEGLDLSDEVEGIKVARRLKAQAVERKLNGHKVQEGMM 1187
Query: 849 -------SYVYDLFAISNHYGGLGGGHYTAYAK 874
S +YDLFA+ NH+GGLGGGHYTA+AK
Sbjct: 1188 VEEEEEESLIYDLFAVDNHFGGLGGGHYTAFAK 1220
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 246/505 (48%), Gaps = 97/505 (19%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
LK+G+ ++L+ +W++ W++Y D S D + P N PGPID S++ +
Sbjct: 102 LKKGDKWYLVDQKWFKQWKKYTGFD--SWDQHTAGEPGSN---------PGPIDTSNLFK 150
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+ + + D +L E DY L+PQ WEKL WY + R ++ G V
Sbjct: 151 DPSKETLND------HLMEELDYALLPQPAWEKLVAWYGLASTSKPICRNVVEYGTYVKH 204
Query: 156 KRVEVFXLCLKL-IDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQ-EKARIWDYFNKQ 213
+VEV+ + LKL + N S+ + + L+EK+ ++ + E+ R+W +
Sbjct: 205 LKVEVYLIDLKLTLHPHANEIKTHSFSRSDTIKTLHEKLVEIFEVSNDEETRLWQRY-MT 263
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
S L QT+ DA + Q ILLE + +G + +RSS G
Sbjct: 264 NSYELLTNQSQTVSDAGIYGGQMILLEKKTKDG---------------QWARSS--TVGL 306
Query: 274 PALSNGHTTGYRFNQYPGSSFGST-FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
LSN G+T FM+ + LQ LGN
Sbjct: 307 CGLSN---------------LGNTCFMN-------------------SALQCLGN----- 327
Query: 333 SALQCLVHTPDLAQYFLGD-------YSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
T L +YF+G Y IN NPLGM G +A +G LL ++W+ +
Sbjct: 328 --------TKPLVEYFIGKEGEAEKPYKKHINRNNPLGMGGVIAETYGSLLDEMWNGQNS 379
Query: 386 AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK-DSGGRP 444
+APR FK + R APQFSGY+QHDS ELLAFLLDGLHEDLN VK+KPY++M + GR
Sbjct: 380 YLAPRQFKNIIGRHAPQFSGYSQHDSHELLAFLLDGLHEDLNLVKKKPYVDMDIKTDGRD 439
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
D ++A E W + RN S+IV +FQGQ KSTL CP C K S FDPFMYL+LPLP TR
Sbjct: 440 DNDIARETWLKYLQRNQSVIVRLFQGQLKSTLHCPKCDKESRIFDPFMYLSLPLPVLNTR 499
Query: 505 TMTVTVFYANGSGLPMPFTVTLMKH 529
+ V + S M V + H
Sbjct: 500 DIEVFFVRTDPSASMMKLVVIDVYH 524
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 97/121 (80%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+ K ++AI+++ C+D F+ +E LG DD WYCPQCKEH QA+KK DLW +P++LV HLK
Sbjct: 666 SATKEPKKAITVYGCMDLFVNKEVLGEDDAWYCPQCKEHVQASKKFDLWKMPEILVIHLK 725
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
RFSY+RY +NK+++ V FP+ NLDLS Y+ +++ +YDLFA+SNH+GGLGGGHYTAYA
Sbjct: 726 RFSYNRYFRNKIESKVEFPLENLDLSDYVVNQEEPQPLYDLFAVSNHFGGLGGGHYTAYA 785
Query: 874 K 874
K
Sbjct: 786 K 786
>gi|195379442|ref|XP_002048488.1| GJ11329 [Drosophila virilis]
gi|194155646|gb|EDW70830.1| GJ11329 [Drosophila virilis]
Length = 1765
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 272/566 (48%), Gaps = 95/566 (16%)
Query: 87 ERPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
+RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ + WY
Sbjct: 480 QRPGPIDNSNLITTNPYRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKAVNRWYGDN 539
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTV----------------------- 177
LPR++I + +E +E++ L L+++ + + T+
Sbjct: 540 LPLPRQVI-QPPNSEVELELYPLNLRILLHQVQTPTISGANTQITNWGSTVSGGYGVLAS 598
Query: 178 -----------------------IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 599 GGGYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKPEDIRLWH------ 652
Query: 215 STSPLDVSDQTLDDAMLQMDQDIL----LEVQVDNGISMDSTGNDLALVPIEPSRSSLTI 270
+ S TLD++ + +++D + L ++ ++ + ++ DL P E S + T
Sbjct: 653 ----VPPSSATLDNSAILLEEDTMCLKELLIRDNDQLLLEIRNKDLTW-PEELSSLASTQ 707
Query: 271 AGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCF 330
+G G D + + G GL NLGNTCF
Sbjct: 708 SGQAGAGPG----------------------DRRRLTRTSIMSVHAPGATGLHNLGNTCF 745
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MN+ALQ L +T LAQYF + E+N N LG G+LA+ + +LL+++W++ +VAP
Sbjct: 746 MNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYAELLKEVWTATTRSVAP 805
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
+ + + APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA
Sbjct: 806 LKLRFCVNKHAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVA 865
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP + V
Sbjct: 866 AEAWSQHHARNQSIIIDLFYGQLKSKVSCLCCGHESVRFDPFSLLSLPLPVENYVYLEVL 925
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
V +GS +P+ + V L DL L+T C L+ +L+ E++N QI + +
Sbjct: 926 VILLDGS-VPIKYGVRLNSECKYGDLKHKLATLCPLQ-PSLMLVCELWNSQIRQVLADEE 983
Query: 570 ELISSIKDDEHIVAYRFDRKQGGKIK 595
+L + + + Y+ + + +
Sbjct: 984 KL--RTQSSKELYVYQLPEQSNARTR 1007
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1429 IAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL---EQW 1485
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1486 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1545
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1546 SVPQETIL 1553
>gi|350424599|ref|XP_003493849.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Bombus
impatiens]
Length = 928
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 293/610 (48%), Gaps = 84/610 (13%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y +++ N L G GE+
Sbjct: 169 GVIGLRNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKIDLSRRNKLNSKKYGTKGEITEQ 228
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +WS AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+ +
Sbjct: 229 LALLLKAIWSCQYDPEMSTAFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATK 288
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K+S GRPD+ VA E NH N+S + VFQ Q++S+L CP C + S TFDPF
Sbjct: 289 KKYKIIKNSFGRPDDIVAAETLANHVRCNNSFVHAVFQAQFRSSLTCPRCHRQSNTFDPF 348
Query: 492 MYLTLPLPSTVTR-TMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKID 548
+ +++P+P + + V V Y + + V++ + ++L ILA T ID
Sbjct: 349 LCVSVPVPQNHRQMNLFVNVLYTSQQPRQVKIGVSVNQMANVRELREILASDTG----ID 404
Query: 549 EG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +LL E+++ R F + + +S I +++ + + + + I+ W
Sbjct: 405 ENHMLLTEIHDEGFHRTFSD-CQPLSVITENDPLYCIELPQLKEPAEQAYILLVW----I 459
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADID-IAVSKLLSPLRRTYSSAKAHGGKENGFL 666
+ KG R+ F +P + E S D+ + + ++ S L ++ G N +
Sbjct: 460 NVLTKGDLRQRFSSPYTMQVSRE-TSYEDLQKLLLKEMHSVLADDVLTSSQSPGLFNIRV 518
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
+ + ++ L + ++ L+L + DS +H+K++
Sbjct: 519 ADPAATPIQDEHPCIDPCVEHPLYTEQIEQALALCAD----------DS---GPQHVKLI 565
Query: 727 LDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
L+W DD ++ + + +K L + G A++L C D + E
Sbjct: 566 LEWDEATKCNIIQDDNDQIEEHASVKQLKTNSELG--------GAVTLEECFDLYTRAEI 617
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDTFVNFPILN 835
LG +D W+CP C + ++ KKL LW LPD+LV HLKRF + +KL V+FP+
Sbjct: 618 LGAEDAWHCPYCNKKQEVVKKLGLWSLPDILVIHLKRFRQQSKQRSTSKLTMLVDFPLYG 677
Query: 836 LDLSKYMKSKDGESY------------------------------VYDLFAISNHYG-GL 864
D++ ++ +++ VYDL+AI NH+G L
Sbjct: 678 FDMTPHLAHNGVQTHNNVSSLGGLGWSPWKKPRPRQQNIPKYDENVYDLYAICNHHGQDL 737
Query: 865 GGGHYTAYAK 874
GGHYTA+ +
Sbjct: 738 QGGHYTAFCR 747
>gi|340716424|ref|XP_003396698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Bombus
terrestris]
Length = 928
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 182/618 (29%), Positives = 294/618 (47%), Gaps = 100/618 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y +++ N L G GE+
Sbjct: 169 GVIGLRNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKIDLSRRNKLNSKKYGTKGEITEQ 228
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +WS AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+ +
Sbjct: 229 LALLLKAIWSCQYDPEMSTAFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATK 288
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K+S GRPD+ VA E NH N+S + VFQ Q++S+L CP C + S TFDPF
Sbjct: 289 KKYKIIKNSFGRPDDIVAAETLANHVRCNNSFVHAVFQAQFRSSLTCPRCHRQSNTFDPF 348
Query: 492 MYLTLPLPSTVTR-TMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKID 548
+ +++P+P + + V V Y + + V++ + ++L ILA T ID
Sbjct: 349 LCVSVPVPQNHRQMNLFVNVLYTSQQPRQVKIGVSVNQMANVRELREILASDTG----ID 404
Query: 549 EG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +LL E+++ R F + + +S I +++ + + + + I+ W
Sbjct: 405 ENHMLLTEIHDEGFHRTFSD-CQPLSVITENDPLYCIELPQLKEPAEQAYILLVW----I 459
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLP 667
+ KG R+ F +P + E S D+ KLL L+ +S
Sbjct: 460 NVLTKGDLRQRFSSPYTMQVSRE-TSYEDL----QKLL--LKEMHSVLAD---------- 502
Query: 668 EVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKP-------- 719
D L++S + + + D + + + D + P+ + I +
Sbjct: 503 ---DVLTSSQSPGLFNIRVADPAATPIQDEHPCIDPCVE--HPLYTEQIEQALALCADDS 557
Query: 720 -GKHIKVLLDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
+H+K++L+W DD ++ + + +K L + G A++L C
Sbjct: 558 GPQHVKLILEWDEATKCNIIQDDNDQIEEHASVKQLKTNSELG--------GAVTLEECF 609
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDT 827
D + E LG +D W+CP C + ++ KKL LW LPD+LV HLKRF + +KL
Sbjct: 610 DLYTRAEILGAEDAWHCPYCNKKQEVVKKLGLWSLPDILVIHLKRFRQQSKQRSTSKLTM 669
Query: 828 FVNFPILNLDLSKYMKSKDGESY------------------------------VYDLFAI 857
V+FP+ D++ ++ +++ VYDL+AI
Sbjct: 670 LVDFPLYGFDMTPHLAHNGVQTHNNVSSLGGLGWSPWKKPRPRQQNIPKYDENVYDLYAI 729
Query: 858 SNHYG-GLGGGHYTAYAK 874
NH+G L GGHYTA+ +
Sbjct: 730 CNHHGQDLQGGHYTAFCR 747
>gi|348539075|ref|XP_003457015.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Oreochromis niloticus]
Length = 1629
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 153/249 (61%), Gaps = 2/249 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA++F LL
Sbjct: 740 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCTNPLGTGGRLAISFAVLL 799
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 800 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 859
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GR DE VA E W+ HK RNDS IVD+FQGQ+KS LVCP CSKVSITFDPF+YL +
Sbjct: 860 TVDSDGRLDEVVAEEAWQRHKMRNDSFIVDLFQGQFKSKLVCPTCSKVSITFDPFLYLPV 919
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + ++V F P+ F V++ K +L + E L LAEV
Sbjct: 920 PLPQK-QKVLSVFYFAKEPHKKPIKFLVSVSKESSSTAEVLESISRSVRVKPENLRLAEV 978
Query: 557 YNHQIFRFF 565
++ R F
Sbjct: 979 GKNRFQRMF 987
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCP+C++HR+A+K+L LW
Sbjct: 1315 KELEYEEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLW 1374
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY---MKSKDGESYVYDLFAIS 858
LP+VL+ LKRFS+ ++ ++K++ V+FP+ NLDLSK+ K + + +YDL+A+
Sbjct: 1375 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDEMQQPPIYDLYAVI 1434
Query: 859 NHYGGLGGGHYTAYAKV 875
NHYGG+ GGHYTAYA++
Sbjct: 1435 NHYGGMIGGHYTAYARL 1451
>gi|403361870|gb|EJY80649.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1163
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 269/519 (51%), Gaps = 59/519 (11%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
EE ++V+++ D + G+ ++L+S W + W+RY D D ++ + +S
Sbjct: 207 EEAKMVKEMLEDMDNLVTPGSTWYLLSMDWVKKWQRYTYYDYLEPDQMAEEE-----ISE 261
Query: 84 K-RAERPGPIDNSDIIQNGNG---------SSEGDDLEVRRNLEEGQDYVLVPQQVWEKL 133
K R PGP++N I+ + S + + ++ NL+EG DY+LV ++++ L
Sbjct: 262 KERNTPPGPLNNISILATLDKTKTILEEMQSKKWMNSHLKPNLKEGVDYMLVNLEIFDFL 321
Query: 134 FCWYKGGPA--LPRKMISEGIVN--EKRVEV------FXL---------CLKLI--DSRD 172
Y P + R IS G N E +EV F L C+K I +D
Sbjct: 322 LKKYNCLPGHEIKRMGISVGEENMGEGLLEVNFRPINFVLIPNNLTKFECVKTIYVSRKD 381
Query: 173 NSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWD-YFNKQRSTSPLD-----VSDQTL 226
V + ++A +L++K K R + RIW F+K+ ++ + +
Sbjct: 382 KLIDVRKALQRAINFRLFQK--KERSLMVNNMRIWKCNFSKEEEYEAIEKKYKNYTQVKV 439
Query: 227 DDAMLQ---MDQDILLEVQVDNGISMDSTGNDLALVPIEPS---RSSLTIAGGPALSNGH 280
D L D+D+L+E ++ D+ ++ + + + I N
Sbjct: 440 DGKCLNPRPEDEDVLIE-------DVELAEEDVIVIELPKTLKPEVYIFIPQNDEERNQF 492
Query: 281 TTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVH 340
Y N+ P + + D K + G+ GLQNLGNTCFMNS LQCL +
Sbjct: 493 EQDYT-NKTPDIDYVPPTLQEIQTRDLEAIMKPSSRRGVTGLQNLGNTCFMNSGLQCLSN 551
Query: 341 TPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
T +L +YF + + +IN +NPLGM G+LAL +G+L++++W SG A AP K + +
Sbjct: 552 TIELTKYFCNNMHKQDINKDNPLGMKGQLALTYGELIKEMWMSGSARTAPHELKKVVGKR 611
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKAR 459
+FSG+ Q DS EL+ +++D +HEDLNRVK+KPY+EM+DS GRPD+EVA E W AR
Sbjct: 612 VTKFSGFGQQDSCELINYVIDLMHEDLNRVKKKPYVEMQDSNGRPDQEVAQEHWDAFIAR 671
Query: 460 NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
N S+IVD+ GQYKST+ C C +SITFDPF+ L++P+
Sbjct: 672 NRSIIVDLMYGQYKSTVQCQECGFISITFDPFLTLSVPI 710
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 21/139 (15%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
++K +++ I+L +CL A+ EE L D WYC +CKE R KKL+L+ LP +L+ LKR
Sbjct: 988 MQKKKKDLITLDTCLKAYSREELLTGQDQWYCKECKEQRDIHKKLELYKLPKILIIQLKR 1047
Query: 815 FSYSRYLKN------------------KLDTFVNFPILNLDLSKYM--KSKDGESYVYDL 854
F R N K+ V+FP+ LDL ++ S D Y YDL
Sbjct: 1048 FQSKRGAGNSKQGGFMAMAMAQVLHQEKVSELVDFPVEGLDLRPFIIDDSTDTPIY-YDL 1106
Query: 855 FAISNHYGGLGGGHYTAYA 873
+A+SNHYG L GGHYTAYA
Sbjct: 1107 YAVSNHYGSLNGGHYTAYA 1125
>gi|432865793|ref|XP_004070616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Oryzias
latipes]
Length = 1552
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 170/288 (59%), Gaps = 3/288 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YF + EIN NPLG G LA+ F LL
Sbjct: 741 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFEAEINCSNPLGTGGRLAIGFAVLL 800
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 801 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 860
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GR DE VA E W+ HK RNDS IVD+FQGQ+KS LVCP+CSKVSITFDPF+YL +
Sbjct: 861 TVDSDGRLDEVVAEEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLPV 920
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + ++V F P+ F V++ K +L + E L +AEV
Sbjct: 921 PLPQK-QKVLSVFFFAKEPHKKPIKFLVSVSKENSSTAEVLESISRSVRVKPENLRIAEV 979
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQE 604
++ R F P++ + ++ + + + K K ++ ++ Q+
Sbjct: 980 SKNRFQRIFL-PSQSLDTVSPSDMLFCFELLSKDLAKERVLLIKVHQK 1026
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCP+C++HR+A+K+L LW
Sbjct: 1300 KELEYEEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLW 1359
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDG--ESYVYDLFAIS 858
LP+VL+ LKRFS+ ++ ++K++ V+FP+ NLDLSK+ + KD + +YDL+A+
Sbjct: 1360 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDDMQQPPIYDLYAVI 1419
Query: 859 NHYGGLGGGHYTAYAKV 875
NHYGG+ GGHYTAYA++
Sbjct: 1420 NHYGGMIGGHYTAYARL 1436
>gi|301111055|ref|XP_002904607.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262095924|gb|EEY53976.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 901
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 173/279 (62%), Gaps = 4/279 (1%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
+ E+ G GL+NLGNTCFMNSALQCL H L +YFL + Y ++N +NPLG G LA
Sbjct: 307 QAERRGKMGLRNLGNTCFMNSALQCLSHVELLTRYFLSNRYKKDLNRDNPLGTGGNLAEE 366
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ LL++LW + +P K ++RFAPQFSG+ QHD+QELLA+++DGLHEDLNRVK
Sbjct: 367 YDGLLKELWFGTVPSTSPANLKRAISRFAPQFSGFQQHDAQELLAYIIDGLHEDLNRVKH 426
Query: 432 KPYIEMKDS-GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
KPY E+ +S G + D VA E W+ H RNDS+ VD QGQ+KST+VCP+C+KVSITFDP
Sbjct: 427 KPYTEVNESDGSQDDAAVAKEAWQRHLLRNDSIFVDHVQGQFKSTVVCPICNKVSITFDP 486
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F + L LP R + V + + + V + K G L ALS C +
Sbjct: 487 FNCIQLELPQQQNRQIEVIFVPSESAKSMTRYLVDVPKKGSVLVLKRALSKLCGVS-PSS 545
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
LL A++Y +R + E + ++D+ I+ Y+ D K
Sbjct: 546 LLAADIYQSMTYRIIGD-TERVHRFREDDRILMYQVDVK 583
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 3/118 (2%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY-S 818
+ ISL C F+ E L ++WYC +C EHRQA K +++W LPDVLV LKRF Y +
Sbjct: 728 HDGISLDDCFRNFVKPETLDQANLWYCSKCNEHRQARKTMEMWRLPDVLVLSLKRFEYRN 787
Query: 819 RYLKNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
L++KLD +V+FP+ LD+S Y KS D + YDLFA+SNHYG +G GHYTA+AK
Sbjct: 788 EILRDKLDVYVDFPLEGLDMSPYCLEKSDDKDHLSYDLFAVSNHYGSMGFGHYTAFAK 845
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 23 DEERQIVQDLKNQSDLD-LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
+++R I++ L Q+D L+ G+ F++S +W+ W +V D+ +
Sbjct: 60 NKQRAIIKRLMTQADEQGLQMGDKRFVLSAKWWERWCEFVGYDD------------KQDI 107
Query: 82 SSKRAERPGP--IDNSDIIQNGNGSSEGDDL--EVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+ A P P I+N ++ G+ +S + + +R L+E YVL+PQ+VW+ L WY
Sbjct: 108 PATGAGNPAPSRINNLPLLHVGSDTSLDELMGGPLRPQLKENYHYVLLPQEVWDALLIWY 167
Query: 138 KGGPALPRKMISEG 151
GGP + R ++ G
Sbjct: 168 SGGPTIARFVVQVG 181
>gi|444510630|gb|ELV09652.1| Laminin subunit beta-2 [Tupaia chinensis]
Length = 3008
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 2154 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 2213
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 2214 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 2273
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 2274 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 2333
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 2334 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 2391
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 2392 VIKNRFHRVF-LPSNSLDTVSPSDVLLCFELLSPELAKERVVVLEVQQRPQVPS 2444
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 2697 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 2756
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 2757 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 2816
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 2817 YGGMIGGHYTACARL 2831
>gi|312372464|gb|EFR20418.1| hypothetical protein AND_20136 [Anopheles darlingi]
Length = 1884
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 253/538 (47%), Gaps = 97/538 (18%)
Query: 89 PGPIDNSDII------QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
PGPIDNS +I Q + EG L+ L + +D+ LVP +W+ L WY G
Sbjct: 593 PGPIDNSSLIAPHMFKQIPTLTGEGGRLKRDTTLVQHRDFELVPDSLWKALAQWYGGPLP 652
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLI---------------------------------- 168
LPR++I + +E++ L L+++
Sbjct: 653 LPRQVIQPQANADVELELYPLNLRILRHQSQPAAHQQQHQMSTAGGGSAWASMSGGYGAL 712
Query: 169 ------DSRDNSQTVIRLSKK-----------ASTRQLYEKVCKLRGIEQEKARIWDYFN 211
S N TV++ KK A+ RQ+ E +C+ + E R+W
Sbjct: 713 TAGSYPTSVSNVSTVLQPPKKYLAYTAAFSRLATVRQVGEFLCQRLKLRVEDIRLWHLV- 771
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV-DNGISMDSTGNDLALVPIEPSRSSLTI 270
+P +S+ ML+ D L E+ + DN + N P E +LT
Sbjct: 772 ----PTPTGISEFPY---MLEEDHLTLNELSIADNDQVLLEIRNKDLTWPEELGSLALTQ 824
Query: 271 AG-GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTC 329
G G +L T +Q+P G GL NLGNTC
Sbjct: 825 GGTGTSLERRGTVASIQSQHP--------------------------PGATGLHNLGNTC 858
Query: 330 FMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMN+ALQ L +T L QYF+ + E+NT N +G G+L L + +LLR +W++ ++A
Sbjct: 859 FMNAALQVLFNTQPLTQYFIKRMHLYELNTANKMGTKGQLVLRYAELLRDVWTASTRSIA 918
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
P + + + APQFSG QHDSQELL +LLD LHEDLNRV +KPY E+KDS GR D V
Sbjct: 919 PLKLRFCVTKHAPQFSGGGQHDSQELLDWLLDSLHEDLNRVMEKPYSELKDSDGRSDVIV 978
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W H ARN S+IVD+F GQ KS + C C + S+ FDPF L+LPLP V
Sbjct: 979 AAEAWNQHHARNQSIIVDLFYGQLKSKVTCQGCGRDSVRFDPFSLLSLPLPVENYTYCEV 1038
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID-EGLLLAEVYNHQIFRFF 565
V +GS +P+ + + L DL LS C +D E +L+ E+ N QI RF
Sbjct: 1039 LVMLLDGS-VPVKYGLRLNSEMKYWDLKKQLSELCNGALDPEQMLICELSNSQI-RFI 1094
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 721 KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGP 780
+ I++ +DW L S + L H++ +K + E + L CL AF +EE L
Sbjct: 1494 RSIQIAIDWDPTALHLRYQSTRERLWTEHESVAICRKQQTEPVDLDHCLRAFTSEEKL-- 1551
Query: 781 DDMWY-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
+ WY C CK+ + ATKKL +W LP +L+ HLKRF+Y K VNFP + D +
Sbjct: 1552 -EQWYHCSHCKQKKPATKKLQIWKLPPILIVHLKRFNYVNGKWVKSQKVVNFPYEDFDPT 1610
Query: 840 KYMKSKDGES 849
Y+ S E+
Sbjct: 1611 PYLASVPQET 1620
>gi|145547132|ref|XP_001459248.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427072|emb|CAK91851.1| unnamed protein product [Paramecium tetraurelia]
Length = 1050
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 262/533 (49%), Gaps = 81/533 (15%)
Query: 38 LDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDI 97
L K NL L+S W+ W++YV S D + D P SK + N+D+
Sbjct: 58 LSKKYLNLILLLS--WFNQWKQYV-----SYDQVVNDQP----PDSKFGQTMLHGYNNDL 106
Query: 98 IQNGNG--------SSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMIS 149
+ ++ + ++ NL+E +DY+++ QQ+ + L Y+G + R I
Sbjct: 107 LDTRINECFKFHPLNTHPWNTWLKPNLQEDKDYIVISQQIQDYLNQNYRGTQIM-RNSIG 165
Query: 150 EG-----IVNEKRVEVFXLCLKLI--DSRDN----SQTVIRLSKKASTRQLYEKVCK--- 195
+G +VN R + I ++DN + +++ + + LY + K
Sbjct: 166 QGKNKNVVVNLLRFNATLILANTIMQIAQDNLTQFEKEILQADENCVIKDLYTLIQKTVH 225
Query: 196 -LRGI--EQEKARIWDYFNK-----------QRSTSPLDVSDQTLDDAM---LQMDQDIL 238
RG Q RIW Y ++ ++ LD +D + D ++ DI
Sbjct: 226 TFRGNYNTQNGVRIWRYKHQTDPFKGLFAEIKKQVQDLDFNDDQVFDFSGEPIENSPDIT 285
Query: 239 LEVQVDNGISMDSTGNDLALVPIEPSRSSLTI------AGGPALSNGHTTGYRFN-QYPG 291
L+ S++ T NDL L+ + I G G + F +
Sbjct: 286 LK-------SLNLTQNDLVLIEFQQHYKPWCIKHPSVPVEGKCEGCGQISELHFPCKCKK 338
Query: 292 SSFGSTFMDMDD-----------GYDSYNTAK----KGEKGGLAGLQNLGNTCFMNSALQ 336
++ S ++D G D + G+AGL NLGNTCFMNS Q
Sbjct: 339 VAYCSEKCKVNDEQFHLPKCDPCGSDDEQVKQIIINDQSVKGIAGLANLGNTCFMNSGTQ 398
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
CL +T L++YF+ + Y DEIN +NPLG G+L + L++KLW + V P +FK
Sbjct: 399 CLSNTYQLSEYFITNKYFDEINEDNPLGTKGQLVRKYASLIKKLWCGHKNIVIPTSFKKA 458
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ +F P F G+ QHDS EL+ FLLDGLHEDLNRVK+KPY+E KD+ G+PD EVA E W N
Sbjct: 459 VGQFQPMFKGFQQHDSSELITFLLDGLHEDLNRVKKKPYVESKDNQGKPDFEVAKESWDN 518
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
H ARN S+IVD+ GQYKSTL CP CS++SITFDPF+ L +P+ +++ V
Sbjct: 519 HLARNQSIIVDLMHGQYKSTLKCPTCSQISITFDPFLTCGLSIPNKKQKSIQV 571
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 26/138 (18%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR-YL 821
++L CL E L D+ WYC CKEH QA K + ++ D+L+F LKRF S +
Sbjct: 864 VTLQECLRQSEQPEQLAEDNAWYCKVCKEHVQAYKSMQIYKASDILIFTLKRFKASSGFF 923
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKD-------------------------GESYVYDLFA 856
K KL+TFV FP+ LDL+ ++ +K+ + +YDLFA
Sbjct: 924 KQKLETFVEFPVRGLDLTDFILNKNRPLDYEQEVKDQEKIEEEFQEQNEGNKKLIYDLFA 983
Query: 857 ISNHYGGLGGGHYTAYAK 874
+SNH+GG+GGGHYTA+ K
Sbjct: 984 VSNHFGGMGGGHYTAFGK 1001
>gi|449016365|dbj|BAM79767.1| ubiquitin-specific protease UBP15 [Cyanidioschyzon merolae strain
10D]
Length = 814
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 309 NTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGE 367
N GL GL NLGNTCFMNSA+QCL T LA++FL G+Y ++N NPLG G
Sbjct: 218 NAIAATRATGLVGLSNLGNTCFMNSAIQCLASTVPLAEFFLSGEYRKDLNRSNPLGTGGV 277
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
LA F L+R+LWS+ + VAPR FK +++R+APQFSGY QHD+QE + FLLDGLHEDLN
Sbjct: 278 LAEEFAALVRQLWSTSQGTVAPRRFKYQVSRYAPQFSGYGQHDAQEWITFLLDGLHEDLN 337
Query: 428 RVKQKPYIEMKDSGGRPDEEV-ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
RV++KPYI + PD++V +E W+ HKARNDS+IVD+F GQY+S + CP C K+S+
Sbjct: 338 RVRRKPYIPLD-----PDQDVPPDEAWRYHKARNDSVIVDLFHGQYRSRVQCPECDKISV 392
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVF 511
T DPFMYL+LPLP R +T+ ++
Sbjct: 393 THDPFMYLSLPLPGRRERLVTIRLW 417
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ AI L CL + E L D++WYCP+CK+H++A K+L L+ P +L+ HLKRF
Sbjct: 641 RRNSNGAIDLHQCLHLWSETEQLDDDNLWYCPRCKKHQRAWKQLSLYRAPSILIIHLKRF 700
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
Y+ + ++KLD V FP+ NL+L G VYDL+A+S+H GGLG GHYTA
Sbjct: 701 QYTSWFRDKLDVLVEFPLRNLELDFA-----GNRVVYDLYAVSHHMGGLGSGHYTA 751
>gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]
Length = 1124
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 176/292 (60%), Gaps = 16/292 (5%)
Query: 290 PGSSF--GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
P SSF S++ Y S + G+ GL+NLGNTCFMNS LQCL++T L Y
Sbjct: 456 PVSSFSPASSYNQFARDYGSEAGKGRPTFEGVVGLRNLGNTCFMNSMLQCLINTAPLRDY 515
Query: 348 FLGD--------YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
FL ++ EIN NPLGM G +A+ F LLRK+WS AVAP + K + ++
Sbjct: 516 FLEKDPETGSPFFTKEINRHNPLGMKGIMAVEFASLLRKIWSGEFTAVAPTSLKSVIGQY 575
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKAR 459
APQF+GY Q DSQEL+ FLLDGLHEDLNRVK KPY + + GR D EVA E W+ R
Sbjct: 576 APQFAGYQQQDSQELMNFLLDGLHEDLNRVKTKPYTKPVERNGREDPEVAQEEWQQFVRR 635
Query: 460 NDSLIVDVFQGQYKSTLVC--PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
N+S+IVD F GQ +S + C P C SITFDP+M L++P+P+ T T+ V +F+ANG
Sbjct: 636 NNSIIVDNFMGQLRSHVTCSNPDCGNESITFDPYMNLSVPIPNKETVTVQVQLFWANGD- 694
Query: 518 LPMPFTVTLMKHGCC--KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
+PM + + L K C +D LS + + + EV+NH+I + + +
Sbjct: 695 IPMKYALHLPKEDMCTLQDAKEKLSQLSSVPV-AWIFFVEVWNHRILKAYSD 745
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 5/122 (4%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
++ E I+L +CL F E LG D WYCP+CK+H +A KK DL+ LP VL+FHLKRF Y
Sbjct: 964 SKAEPITLLNCLTKFTEREQLGEADTWYCPKCKDHVRAFKKFDLFSLPKVLIFHLKRFRY 1023
Query: 818 SR---YL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
++ Y+ ++K+ T V FPI LDLS++ + ++G +YDLFA+S H GGLGGGHYTA
Sbjct: 1024 AQNSFYMHRDKISTLVEFPIEGLDLSEFVIGPQNGSEPIYDLFAVSEHMGGLGGGHYTAV 1083
Query: 873 AK 874
AK
Sbjct: 1084 AK 1085
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 14 GGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD-EPSIDNIS 72
GG+ ERQ+ +D L+EG +FL+S+ W W R + D + +
Sbjct: 12 GGALRRLAASLERQLAED-------QLREGEDWFLVSSAW---WARVLGRDVGDDSADKT 61
Query: 73 FDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEK 132
D + ++ R + N+ ++ S + ++ L EG+DY LV Q+VW +
Sbjct: 62 DDDSEDSDDAAPRGNDELRVQNAALLDAELSSCAREVAVLKPMLVEGKDYRLVSQRVWNQ 121
Query: 133 LFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRL 180
L + + R +++ G + VEV + +++ R + + L
Sbjct: 122 LSDQFGFDWEIARPVVARGPAKTRVVEVNPVAFEVLGWRTGLEAPVEL 169
>gi|345480919|ref|XP_003424246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 2
[Nasonia vitripennis]
Length = 963
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 293/614 (47%), Gaps = 90/614 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP-----LGMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y D+++ G GE+
Sbjct: 182 GVIGLRNHGNTCFMNAVLQCLSHTDRLAKYFVMDTYKDDLSKNKKLNSKKFGTKGEITEQ 241
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +WS AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+
Sbjct: 242 LALLLKAIWSCQYDPEMSTAFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATN 301
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K+S G+P E VA E + NH N S + +VFQ Q++S+L CP C S TFDPF
Sbjct: 302 KKYKIIKNSFGQP-ESVAEETFANHVRCNKSFVHEVFQAQFRSSLTCPRCQMQSNTFDPF 360
Query: 492 MYLTLPLPSTVTR-TMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKID 548
+ +++P+P + + ++ V V Y + + V++ + K+L ILA T ++D
Sbjct: 361 LCVSVPVPQSQRQMSLFVNVLYTSQQPRQVRIGVSVNQSANVKELREILASDT----RVD 416
Query: 549 EG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +LL EV++ R F + + +S I +++ + + + + I+ W
Sbjct: 417 ENHMLLTEVHDEGFHRTFSD-CQPLSVITENDPLYCIELPQLKEPTEQAYILLVW----I 471
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENG-FL 666
+ +KG R+ FG+P + E S D+ LL + T + + G F
Sbjct: 472 NVLVKGDLRERFGSPYTMQVSRE-TSYEDLQ---KLLLKEMHATLADDVLTSSQSPGLFN 527
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
V D + + E C + + L E+I + D +H+K++
Sbjct: 528 IRVAD-------PAATPVQDEHPCI-DPCVEHPLYTEQIEQALALCADD--SGPQHVKLI 577
Query: 727 LDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
L+W DD ++ + + +K L + G TV +L C D + E
Sbjct: 578 LEWDEATKCNIIQDDTDQIEEHASVKQLKSTSEFGGTV--------TLEECFDLYTRAET 629
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDTFVNFPILN 835
LG +D W+CP C ++ KKL LW LP +LV HLKRF + +KL V+FP+
Sbjct: 630 LGVEDAWHCPHCNRKQEVVKKLGLWSLPAILVIHLKRFRQQSKQRSTSKLTMLVDFPLYG 689
Query: 836 LDLSKYMKSKDG----------------------------------ESYVYDLFAISNHY 861
D++ ++ +++G ++ VYDL+AI NH+
Sbjct: 690 FDMTPHL-ARNGVQAQQLSQVTTTTVGIGWPTFKKHTSKQQPVTNYDNNVYDLYAICNHH 748
Query: 862 G-GLGGGHYTAYAK 874
G L GGHYTA+ +
Sbjct: 749 GQDLQGGHYTAFCR 762
>gi|255730030|ref|XP_002549940.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
gi|240133009|gb|EER32566.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
Length = 1324
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/345 (42%), Positives = 202/345 (58%), Gaps = 28/345 (8%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
D+YN G+ GG GL NLGNTC+MNSALQCL+H P++ YF + Y E+NT+NPLG
Sbjct: 304 DAYNDP--GQGGGHLGLNNLGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNTDNPLGY 361
Query: 365 HGELALAFGDLLRKLWSSGR--AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
HG++A AFG LL++ + + +++APR FK + R++ FSGY Q DSQELL++LLD L
Sbjct: 362 HGDVANAFGSLLKQAFDHAKNSSSIAPREFKSTIGRYSSMFSGYLQQDSQELLSWLLDAL 421
Query: 423 HEDLNRVKQKPYIE---MKD---SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR++QKPY E +KD + + +A+ CW HKARNDS+I+D+F G Y+STL
Sbjct: 422 HEDLNRIQQKPYCEKPELKDDEINNPQAIMRLADTCWNQHKARNDSVIIDLFTGLYQSTL 481
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF-YANGSGLP---MPFTVTLMKHGCC 532
+CP C K SITFDPF LTLPLP + T T+ +N +P M V L K
Sbjct: 482 ICPDCGKTSITFDPFNDLTLPLPISKKWYHTFTIVDLSNPGVIPKRIMKLEVELNKTSNF 541
Query: 533 KDLILALSTACCLKI-DEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYR 585
DL+ LS LK+ + L L E++ + I+ F+ N IS I+D + +V Y
Sbjct: 542 DDLLGYLSN--FLKVASKDLFLYELFQNAIYSDFQLDYSKNKFMPISDIIRDTDDVVVYV 599
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
+ + + N ++ S + FG PL L +E
Sbjct: 600 IPHNPETDVIVPVFNAVEDADTSYQMAN----FFGIPLFVVLNKE 640
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 104/181 (57%), Gaps = 19/181 (10%)
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHE-------LYDPSYIKDLP--VVHKTGFTV 755
++S I KD++L L DW +++ + L I LP + K+
Sbjct: 928 LASSTLISKDTVL--------LCDWDNEIFQRCFGDASLTTWENIPSLPNQELEKSKAHF 979
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ I+L CL +F T E LG D+WYCP CK+H++ATK + LW D+L HLKRF
Sbjct: 980 ERQRKAKITLQDCLKSFSTPEVLGEHDLWYCPNCKDHKRATKTIQLWSTGDILTIHLKRF 1039
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+R +K+D V+FPI LD+S+Y+ S + +YDL A+ NHYGGLGGGHYTA
Sbjct: 1040 HSARAFSDKIDVLVDFPIEGLDMSQYVANPSITVDDSIYDLIAVDNHYGGLGGGHYTASV 1099
Query: 874 K 874
K
Sbjct: 1100 K 1100
>gi|320166287|gb|EFW43186.1| ubiquitin specific peptidase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 1643
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 180/284 (63%), Gaps = 9/284 (3%)
Query: 306 DSYNTAKKGEK-GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
D A+ G GGLAGL+NLGNTCFMNS LQCL + L YF+ + + D IN +NPLG
Sbjct: 421 DENEVARAGRGVGGLAGLRNLGNTCFMNSGLQCLSNIAPLTSYFVSNAFVDHINRDNPLG 480
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
+ G++A +G L+R+LWS VAP +FK L FA QF+GY+Q DSQE LAFLLDGLH
Sbjct: 481 LKGKMADEYGALIRELWSGKFDCVAPNSFKKALGSFATQFAGYSQQDSQEFLAFLLDGLH 540
Query: 424 EDLNRVKQKPYIEMKDSGGRPD-EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
EDLNRV +KPY+E +S + EEVA E W+ H RN S++VD+FQGQ+KST++C C+
Sbjct: 541 EDLNRVLKKPYVEKVESTSTDNLEEVAQEAWRRHLLRNQSVVVDLFQGQFKSTVICTTCN 600
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLP-MPFTVTLMKHGCCKDLILALST 541
KVSITFDPFMY+++P+P + R + VT F + LP + VT+ K IL
Sbjct: 601 KVSITFDPFMYVSVPVPVSNERVI-VTHFVPRDTQLPVVRMNVTVPKTANLP--ILRAKM 657
Query: 542 ACCLKI-DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
LK+ L++ + + +FR + + + I + + IV Y
Sbjct: 658 GEMLKVPSSSLVVVDHFKSYVFRVLADDMD-VREISESDEIVVY 700
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 81/116 (69%), Gaps = 5/116 (4%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
++L C AF TEE LGP+D W+CP CK+ + A K+ LW LPDV+V HLKRF YS+ +
Sbjct: 1181 LTLEKCFAAFTTEENLGPNDHWFCPNCKDLQPAAKQFHLWKLPDVVVVHLKRFQYSKSWR 1240
Query: 823 NKLDTFVNFPILNLDLSKYMKSK-----DGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K++ +++P+ L+L+ ++ ++ + ++ +YDL + NH+GG+ GGHYTA+A
Sbjct: 1241 DKIEANIHYPMRGLNLAPFVAAEAQLHNEPDTMLYDLVGVVNHFGGMSGGHYTAFA 1296
>gi|345480921|ref|XP_001606702.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 1
[Nasonia vitripennis]
Length = 979
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 293/614 (47%), Gaps = 90/614 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP-----LGMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y D+++ G GE+
Sbjct: 182 GVIGLRNHGNTCFMNAVLQCLSHTDRLAKYFVMDTYKDDLSKNKKLNSKKFGTKGEITEQ 241
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +WS AFK + ++ Q+ G QHD+QE L +LLD +HEDLN+
Sbjct: 242 LALLLKAIWSCQYDPEMSTAFKSVVDKYGSQYRGNLQHDAQEFLLWLLDKVHEDLNQATN 301
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K+S G+P E VA E + NH N S + +VFQ Q++S+L CP C S TFDPF
Sbjct: 302 KKYKIIKNSFGQP-ESVAEETFANHVRCNKSFVHEVFQAQFRSSLTCPRCQMQSNTFDPF 360
Query: 492 MYLTLPLPSTVTR-TMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTACCLKID 548
+ +++P+P + + ++ V V Y + + V++ + K+L ILA T ++D
Sbjct: 361 LCVSVPVPQSQRQMSLFVNVLYTSQQPRQVRIGVSVNQSANVKELREILASDT----RVD 416
Query: 549 EG-LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA 607
E +LL EV++ R F + + +S I +++ + + + + I+ W
Sbjct: 417 ENHMLLTEVHDEGFHRTFSD-CQPLSVITENDPLYCIELPQLKEPTEQAYILLVW----I 471
Query: 608 SDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENG-FL 666
+ +KG R+ FG+P + E S D+ LL + T + + G F
Sbjct: 472 NVLVKGDLRERFGSPYTMQVSRE-TSYEDLQ---KLLLKEMHATLADDVLTSSQSPGLFN 527
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
V D + + E C + + L E+I + D +H+K++
Sbjct: 528 IRVAD-------PAATPVQDEHPCI-DPCVEHPLYTEQIEQALALCADD--SGPQHVKLI 577
Query: 727 LDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEP 777
L+W DD ++ + + +K L + G TV +L C D + E
Sbjct: 578 LEWDEATKCNIIQDDTDQIEEHASVKQLKSTSEFGGTV--------TLEECFDLYTRAET 629
Query: 778 LGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDTFVNFPILN 835
LG +D W+CP C ++ KKL LW LP +LV HLKRF + +KL V+FP+
Sbjct: 630 LGVEDAWHCPHCNRKQEVVKKLGLWSLPAILVIHLKRFRQQSKQRSTSKLTMLVDFPLYG 689
Query: 836 LDLSKYMKSKDG----------------------------------ESYVYDLFAISNHY 861
D++ ++ +++G ++ VYDL+AI NH+
Sbjct: 690 FDMTPHL-ARNGVQAQQLSQVTTTTVGIGWPTFKKHTSKQQPVTNYDNNVYDLYAICNHH 748
Query: 862 G-GLGGGHYTAYAK 874
G L GGHYTA+ +
Sbjct: 749 GQDLQGGHYTAFCR 762
>gi|395756437|ref|XP_002834134.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Pongo abelii]
Length = 381
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 165/248 (66%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 30 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 89
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 90 QELWSGTQKSVAPLKLQWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 149
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S++VD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 150 LKDSDGRPDWEVAAEAWDNHLGRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 209
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L LS C L E +LLAEV
Sbjct: 210 PLPMDSDMHLEITVIKLDGT-TPVRYGLRLNTDEKYTGLKKQLSDLCALN-SEQILLAEV 267
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 268 HDSNIKNF 275
>gi|198433558|ref|XP_002125579.1| PREDICTED: similar to ubiquitin specific protease 32 [Ciona
intestinalis]
Length = 1588
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 167/252 (66%), Gaps = 3/252 (1%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G +GL NLGNTCFMNS LQC+ +T L +YFL + + E+N NPLGM G +A + DL
Sbjct: 732 AGASGLSNLGNTCFMNSGLQCISNTRPLTKYFLENKHLFELNRTNPLGMKGHIAKRYCDL 791
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
++LWS VAP + ++++AP+F+G++QHDSQELLAFLLDGLHEDLNRV+ KPY+
Sbjct: 792 TQELWSGASKTVAPLKLRWTISKYAPRFNGFSQHDSQELLAFLLDGLHEDLNRVQTKPYV 851
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E+KDS GRPDEEVA E W+NH ARN S+IVD+F GQ +S + C C+ S FDPF +L+
Sbjct: 852 ELKDSDGRPDEEVAQEAWENHLARNQSIIVDLFHGQIRSRVRCLHCNAFSTRFDPFTFLS 911
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPLP + + V V +G +P+ F + L ++ L+ C + + E +LL+E
Sbjct: 912 LPLPMDNSMYLDVIVIRLDGE-IPVRFGLRLNMDDTFVEVRKHLAEKCKISM-EAVLLSE 969
Query: 556 VYNHQIFRFFEN 567
V I F ++
Sbjct: 970 VLGATIKSFLQD 981
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Query: 725 VLLDW-TDDVHELYDPS---YIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGP 780
+ +DW +H Y PS +KD V + + Q+ I L CL AF TEE LG
Sbjct: 1281 ISIDWDPTALHLRYQPSAERVLKDDASVEEG----HRGAQQRIDLNHCLRAFTTEEELGK 1336
Query: 781 DDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDL 838
D++++C +CK + A KKLD+W LP L+ HLKRF + R++K+ V+FP + D
Sbjct: 1337 DELYHCGKCKTRQLAKKKLDIWRLPPTLIIHLKRFQFVNGRWIKSH--KVVDFPKTDFDP 1394
Query: 839 SKYMKSKDGES 849
S +M +D E+
Sbjct: 1395 SSFMTKRDEEN 1405
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 63/188 (33%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGD--------EPSID 69
P +P EE I++ ++ S +L G +++ S +W+R W+ + D P ++
Sbjct: 378 PTSPTEEGVIIRGWMQRASQSELIAGETWYVASGKWWRQWKLHTEYDPVLNGKLESPVLE 437
Query: 70 NISFDSPHMNGVSSKRA---------------------ERPGP----------------- 91
+ + + ++G +S + E+P
Sbjct: 438 SGYYSNGRLSGETSSTSSDTVASAHEATETMQHVLTGGEKPSKNRHTKHAGKAQRVSKTT 497
Query: 92 ----------IDNSDII----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
I+NSDI+ + + EG L + L EGQD++++P QVW+ L WY
Sbjct: 498 PTTPNTSPGPINNSDILLEESKVATLTDEGGRL--KEGLVEGQDFIVLPAQVWKALHHWY 555
Query: 138 KGGPALPR 145
G P+LPR
Sbjct: 556 GGSPSLPR 563
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+A+S H G LGGGHY AYAK
Sbjct: 1492 LYDLYAVSCHSGILGGGHYIAYAK 1515
>gi|346971145|gb|EGY14597.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 1451
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 193/614 (31%), Positives = 279/614 (45%), Gaps = 102/614 (16%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQN 100
K G+ +++ST W R + + GD + + D ER GP+DNSDII++
Sbjct: 79 KVGDTAYVVSTSWVRKAQAF--GDPKNTKDGPSD------------ERLGPVDNSDIIES 124
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMI--------S 149
+ +G + +R + D L P W + WY G + RK I S
Sbjct: 125 ILATDDGPFVRLRDGVSLDSDISLFPDDAWTLVSEWYGLADGQIPIIRKAINTAQDSAPS 184
Query: 150 EGIVNEKRVEVFXLCLKLIDS----------RDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
I+ E VF + +L S +D + V+ S AS + ++++ GI
Sbjct: 185 TNIIFEINPPVFTVH-RLWSSGSEIPIETKLKDAAPIVVVKSTSASYNEFFKELKTKTGI 243
Query: 200 E-QEKARIWDYFNK---------------------QRSTSPLDVSDQTLDDAMLQMDQDI 237
K R+W + + SP + + L D + D
Sbjct: 244 PLDRKIRVWSIAPQTEPSQMDVEPHSALTPPDSPEREPASPPESWKKMLIDVPTYLAVDS 303
Query: 238 LLEVQVD----------NG---ISMDSTGNDLALVPIE------------PSRSSLTIAG 272
L +VD NG +SM + G LV E + +
Sbjct: 304 LRRSKVDAIDNTVNANYNGKSSLSMKALGQSQILVLDEEVERGEFVSTDFKRKGNAKSIA 363
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
+ NG TT N +S + + G G GLQNLGNTC+MN
Sbjct: 364 SRGVGNGKTTQASGNNSGRNSPAPSARSGPITRGRTQQKRSGRSVGAVGLQNLGNTCYMN 423
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SALQC+ +L +YFL +Y E+N +NPLG G++A+ +G LL++++ R AV+PR
Sbjct: 424 SALQCVRSVEELTKYFLTSEYEKELNRDNPLGYDGQVAITYGQLLKEIYRDSRGAVSPRE 483
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN- 450
FK + R FSG+ Q D+QE L FLLDGL EDL+R+K+KPYIE DS DE + N
Sbjct: 484 FKVTIGRCRSAFSGWGQQDTQEFLGFLLDGLQEDLSRIKKKPYIEKPDST---DEMIGNE 540
Query: 451 --------ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
E W + R+DS+I D+F G YKSTL CPVC KVSITFDPF LTLPLP
Sbjct: 541 EAIRKMAEEVWDITRKRDDSVIADLFTGMYKSTLKCPVCDKVSITFDPFNNLTLPLPIED 600
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
+ +V F N P+ V L KH + L A+S + +D L+ AE + + F
Sbjct: 601 LWSASVKFFPLNDR--PVLVEVELPKHSAVELLKKAISDRTGVPVDR-LIGAEEFKGKFF 657
Query: 563 RFF---ENPAELIS 573
+ + E+ +E I+
Sbjct: 658 KIYSDNEDASEAIT 671
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R + I+L CLD F E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS S
Sbjct: 1069 RSKGITLEECLDEFEKAEILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSS 1128
Query: 819 RYLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y ++KLD V+FPI LDL ++ + +DG+ VYDL A+ H+GGLGGGHYTA+AK
Sbjct: 1129 GYRRDKLDVLVDFPIEGLDLRTRVLHQEDGKEEVYDLCAVDEHFGGLGGGHYTAWAK 1185
>gi|340374559|ref|XP_003385805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 588
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 274/582 (47%), Gaps = 84/582 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-------YSDEINTENPLGMHGELAL 370
L GL NLGNTCF+NS LQCL +T L +YF+G Y IN NPLG+ G +A
Sbjct: 7 SLCGLSNLGNTCFLNSVLQCLSNTEPLVEYFIGKEGKAEKPYKKHINRNNPLGLGGVIAE 66
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+FG LL +W+ + + PR + +AR AP+ QHDS +LL FLL+ LHEDLN +K
Sbjct: 67 SFGALLNDMWTGQNSYLIPRRLRNVIARHAPELFDSQQHDSHKLLDFLLNKLHEDLNLIK 126
Query: 431 QKPYIEMK-DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
++P IEM + GR D ++A E W + N S+IV +FQGQ KSTL CP C K S TFD
Sbjct: 127 KRPCIEMNIKTEGRDDNDIARESWLCYLQCNQSVIVRLFQGQLKSTLHCPKCEKESRTFD 186
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID- 548
PFMYL+LP+P TR + V + ++ + + +++ K G + L + ID
Sbjct: 187 PFMYLSLPIPVQNTRDIKVFLIRSDPLAIMKKYCLSVPKDGNIFHMKEELQKM--IDIDP 244
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK------IKLEIVNRW 602
L++ +VY+ + R + + +I I D + I Y R G + + + + R+
Sbjct: 245 SNLVVIDVYHSRFHRIYYDKDPII-HIMDRDDIFIYELRRPLGDQNWVPIPVYMREIKRY 303
Query: 603 QEKSA-SDYLKGSERKLFGAPLVTYL-----EEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
S S + ++FG P+V + + L + ++ P R K
Sbjct: 304 TSASYFSQKHMTTYGQVFGLPVVVTVPRIGCKYRSLYNVIMSQITRMVIKPERE--KEEK 361
Query: 657 AHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISS--CKPIQKD 714
G K++ + E S+N+S E EL+ +L F+L + + S + D
Sbjct: 362 NTGAKKSNEIVETNTMPIESNNDSDEAGELKRDKKCDL-FRLVICNSYGSQEITRLEDDD 420
Query: 715 SILKPGKHIKVLLDWT-DDVHELYDPSYIKDLPVVHK-TGFTVKKTRQEAISLFSCLDAF 772
+K + DW +D Y+ +K+ + +TV K ++ +++ C+D+F
Sbjct: 421 EFIKLSSQTYIGCDWEFEDKEAFYN---VKEANAYEEHESYTVAKKPEKPTTVYDCMDSF 477
Query: 773 LTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFP 832
+ ++ L D+ W
Sbjct: 478 MHDKVLAEDESW------------------------------------------------ 489
Query: 833 ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDLS Y+ + + +YDLFA+SNHY G GGGHYTA AK
Sbjct: 490 --KLDLSDYVVNAEEPQPLYDLFAVSNHYSGQGGGHYTASAK 529
>gi|308469287|ref|XP_003096882.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
gi|308241297|gb|EFO85249.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
Length = 901
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 241/482 (50%), Gaps = 54/482 (11%)
Query: 39 DLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII 98
D+ E +++LI+ +W+ + + + + GPIDNS I
Sbjct: 44 DMVENAIWYLIAQKWWNAL--------------------LKAIRDGFVDDVGPIDNSQIS 83
Query: 99 QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRV 158
+ G +++ L E DY VP+ ++++L +Y G+ +E+R
Sbjct: 84 ECRQGV-----FYLKQRLAEQIDYTAVPEHLFKRLVSFY-------------GVEDERRD 125
Query: 159 EVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKA-RIWDYFNKQRSTS 217
+ +K N Q LS + R ++ + + R I+ + + D R +
Sbjct: 126 YIRRTVIK-----KNGQ----LSVEVYPRIVHIALARNRDIKADLVLKPEDTMISLRERA 176
Query: 218 PLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDL--ALVPIEPSRSSLTIAGGPA 275
+++S D + D E+ +D S+DS + + LV +E A P
Sbjct: 177 IMELSLNESDKIRFYVMNDETPEL-IDTSQSIDSYFDTVQKVLVDVEEQGEFFYKAQNPV 235
Query: 276 LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSAL 335
+ + S G+ + S G GL NLGNTCFM SA
Sbjct: 236 QQQPKLSFASQSSSSLGSNGNGLSNAYSAQSSSTGIANRTTPGACGLSNLGNTCFMASAF 295
Query: 336 QCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
QCL + P L YFL D Y ++N ENPLG HG LA A G+L++ +WS A++ PR FKG
Sbjct: 296 QCLSNMPPLRDYFLNDSYLSDLNVENPLGTHGHLAAAVGELMKGMWSGEFASINPRKFKG 355
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR-PDEEVANECW 453
+ +FAP+F+GY+Q D+ EL+A++LDGLHEDLNR+K+KPYIE D + P+ E A + W
Sbjct: 356 IIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPYIEDSDEDAKLPEAEYAAKSW 415
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST-VTRTMTVTVFY 512
+ +K RNDS+IVD GQ KSTL+CPVC K+SI FDPF YL+LPLP+ TV V +
Sbjct: 416 EIYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPFGYLSLPLPAKEQIVKQTVIVMF 475
Query: 513 AN 514
N
Sbjct: 476 LN 477
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Query: 753 FTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
TV R+ + L L+ F +E LG D WYCPQCK+H +ATK+LDLW LP++L+ HL
Sbjct: 689 MTVSTRRK--VMLEETLEWFTKKEQLGEQDSWYCPQCKKHERATKQLDLWKLPEILILHL 746
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
KRF Y+++ + KL V P+ LDL+ + + + E +YDL A+S HYG L GGHYTA
Sbjct: 747 KRFQYTKWSREKLTWEVVIPVRGLDLTDKVANPNHEKAIYDLIAVSRHYGSLSGGHYTA 805
>gi|325179592|emb|CCA13990.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 1806
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 299/673 (44%), Gaps = 130/673 (19%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSW-------------------------- 57
+ER+IV+ Q+ LK G + LI W+R W
Sbjct: 578 QERRIVEWYWTQATKSLKVGQDWNLIGGSWWRKWCYYTEMNVMNGTRYGPLAIPKLPQSA 637
Query: 58 -ERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNL 116
R+V E S+ + F S H RPGPI + +I++ + + V
Sbjct: 638 ENRHVKEHEVSMLDHEFRSTH-------SCRRPGPIASWNILKRSGSRRLNERIAV---- 686
Query: 117 EEGQDYVLVPQQVWEKLFCWYK-GGPALPRKMISEGIVNEK-------RVEVFXLCLKLI 168
G+D LVP V+ L WY GGP + R +I + N+ +E+F L L++
Sbjct: 687 --GRDVFLVPSTVYAMLAMWYSGGGPDVKRSIIP--VKNDDTEPTEILELELFPLVLRVA 742
Query: 169 DSRDNSQTV------IRLSKKASTRQLYEKVCK--LRGIEQEKARIWDYFNKQRSTSPLD 220
+ +V + LS +S L E CK L + EKAR+W YF++Q T
Sbjct: 743 RVELTTGSVVMSGEEVTLSFLSSYGSLLEASCKVLLYMKKIEKARLW-YFHEQHPTHRFP 801
Query: 221 V--------SDQTLDDA------MLQMDQDILLEVQVDNG----ISMDSTGNDLALVPIE 262
+ D+T+ L +LLE+Q +G +D+T A +P
Sbjct: 802 LWQLERDHGQDRTITSVNEYLFHALTQQCVLLLEIQDSDGSWPLSQVDATTKPPAALPTP 861
Query: 263 PSRSSLTIAGG-PALSN-------GHTTGYRFNQYPGSSF----GSTFMDMDDGYDSYNT 310
+ ++T A P ++ H F+ S+F G+ D + +
Sbjct: 862 TQKPAVTNAKSDPGIATSQNASDKSHIRSGAFDLCARSNFEAFIGAPHRDPNSSDTDSQS 921
Query: 311 AKKGEK---------------------GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL 349
+ E+ GL GL+NLGNTC+M SALQCL HT L +Y
Sbjct: 922 SSLREEPYSLALDPITQRRFLTDAFVGDGLIGLENLGNTCYMGSALQCLSHTRLLVEYLR 981
Query: 350 GD-YSDEINTENPLGMHGELALAFGDLLRKLWS---SGRAAVAPRAFKGKLARFAPQFSG 405
Y +IN N G G LA AFG+L+R LWS + AP AFK +++ PQF G
Sbjct: 982 KQAYLSDINDRNRDGHQGRLATAFGELIRVLWSRQNGKKRHFAPAAFKRTISKLQPQFQG 1041
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
QHD+QE LAFLL GL EDLNRV KPY E+KDS GR D VANE W NH R S++V
Sbjct: 1042 SEQHDAQEFLAFLLSGLSEDLNRVVVKPYAELKDSDGRSDAVVANEWWDNHLKREVSVVV 1101
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
+F GQYKS L C +C S F+PF +L L LP + +R++ V VF+ N P+ +V
Sbjct: 1102 ALFTGQYKSLLECELCHYESARFEPFTFLQLSLPESSSRSIVVIVFF-NNDHPPLRCSVR 1160
Query: 526 LMKHGCCKDLILALSTACCLKID-----------EGLLLAEVYNHQIFRFFENPAELISS 574
+ K K +L L + + + +LA++ + + +S
Sbjct: 1161 VSK----KSFVLQLLQQVAILVSKQGKNIQKQQADNFVLAKITSSHTVDMLVDERNPVSM 1216
Query: 575 IKDDEHIVAYRFD 587
I++++ + + D
Sbjct: 1217 IQENDSLTVFEVD 1229
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 725 VLLDW-TDDVHELYDP----SYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLG 779
+ +DW T + E YDP + I D + H ++ Q ++L CL+ F +E +
Sbjct: 1477 IAMDWDTASLKEEYDPLEASTMITDASIEHN-----RQKDQGPLTLDQCLNIFTAQEHIN 1531
Query: 780 PDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
YC +CK R A K +D W LP +LV HLKRF Y++ + KL FV+FP+ LD++
Sbjct: 1532 EA---YCGRCKALRPANKTMDFWRLPPILVIHLKRFCYTQVSRRKLYHFVDFPLTGLDMT 1588
Query: 840 KYMKSKDGESYVYD 853
K++ + +Y+
Sbjct: 1589 KFVAKRRRPKRLYE 1602
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAYAK 874
ES++YDL+A+ NH G L GHY AY +
Sbjct: 1688 NESFLYDLYAVVNHVGALATGHYFAYIR 1715
>gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]
Length = 1168
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 175/292 (59%), Gaps = 16/292 (5%)
Query: 290 PGSSF--GSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
P SSF S++ Y S + G+ GL+NLGNTCFMNS LQCL++T L Y
Sbjct: 500 PVSSFSPASSYNQFARDYGSEAGKGRPTFEGVVGLRNLGNTCFMNSMLQCLINTAPLRDY 559
Query: 348 FLGD--------YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARF 399
FL ++ EIN NPLGM G +A+ F LLRK+WS VAP + K + ++
Sbjct: 560 FLEKDPETGSPFFTKEINRHNPLGMKGIMAVEFASLLRKIWSGEFTVVAPTSLKSVIGQY 619
Query: 400 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKAR 459
APQF+GY Q DSQEL+ FLLDGLHEDLNRVK KPY + + GR D EVA E W+ R
Sbjct: 620 APQFAGYQQQDSQELMNFLLDGLHEDLNRVKTKPYTKPVERNGREDPEVAQEEWQQFVRR 679
Query: 460 NDSLIVDVFQGQYKSTLVC--PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
N+S+IVD F GQ +S + C P C SITFDP+M L++P+P+ T T+ V +F+ANG
Sbjct: 680 NNSIIVDNFMGQLRSHVTCSNPDCGNESITFDPYMNLSVPIPNKETVTVQVQLFWANGD- 738
Query: 518 LPMPFTVTLMKHGCC--KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
+PM + + L K C +D LS + + + EV+NH+I + + +
Sbjct: 739 IPMKYALHLPKEDMCTLQDAKEKLSQLSSVPV-AWIFFVEVWNHRILKAYSD 789
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 5/122 (4%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
++ E I+L +CL F E LG D WYCP+CK+H +A KK DL+ LP VL+FHLKRF Y
Sbjct: 1008 SKAEPITLLNCLTKFTEREQLGEADTWYCPKCKDHVRAFKKFDLFSLPKVLIFHLKRFRY 1067
Query: 818 SR---YL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
++ Y+ ++K+ T V FP+ LDLS++ + ++G +YDLFA+S H GGLGGGHYTA
Sbjct: 1068 AQNSFYMHRDKISTLVEFPVEGLDLSEFVIGPQNGSEPIYDLFAVSEHMGGLGGGHYTAV 1127
Query: 873 AK 874
AK
Sbjct: 1128 AK 1129
>gi|302410611|ref|XP_003003139.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
gi|261358163|gb|EEY20591.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
Length = 1870
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 278/614 (45%), Gaps = 102/614 (16%)
Query: 41 KEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQN 100
K G+ +L+ST W R + + GD + + D ER GP+DNSDII +
Sbjct: 497 KVGDTAYLVSTSWVRKAQAF--GDPKNTKDGPSD------------ERLGPVDNSDIIDS 542
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMI--------S 149
+ EG + +R + D L P W + WY G + RK I S
Sbjct: 543 ILATDEGPFVRLRDGVSLDGDVSLFPDDAWTLVSEWYGLSDGQIPIIRKAINTAQDSAPS 602
Query: 150 EGIVNEKRVEVFXLCLKLIDS----------RDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
I+ E VF + +L S +D + V+ S AS + ++++ GI
Sbjct: 603 ANIIFEINPPVFTIH-RLWSSGSEIPIETKLKDAAPIVVVKSTSASYNEFFKELKTKTGI 661
Query: 200 E-QEKARIWDYFNK---------------------QRSTSPLDVSDQTLDDAMLQMDQDI 237
K R+W + + SP + + L D + D
Sbjct: 662 PLDRKIRVWSIAPQPEPSQMDVEPHSALTPPDSPEREPASPPESWKKMLIDVPTYLAVDS 721
Query: 238 LLEVQVD----------NG---ISMDSTGNDLALVPIE------------PSRSSLTIAG 272
L +VD NG +SM + G LV E + +
Sbjct: 722 LRRSKVDAIDNTVNANYNGRSSLSMKALGQSQILVLDEEVERGEFVSTYFKRKGNAKSIA 781
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
+ NG TT N +S + + G G GLQNLGNTC+MN
Sbjct: 782 SRGVGNGKTTQSSGNNSGRNSPAPSARSGPITRGRTQQKRSGRSVGAVGLQNLGNTCYMN 841
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
SALQC+ +L +YFL +Y E+N +NPLG G++A+ +G LL++++ R AV+PR
Sbjct: 842 SALQCVRSVEELTKYFLTSEYEKELNRDNPLGYDGQVAITYGQLLKEIYRDSRGAVSPRE 901
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVAN- 450
FK + R FSG+ Q D+QE L FLLDGL EDL+R+K+KPYIE DS DE + N
Sbjct: 902 FKVTIGRCRSAFSGWGQQDTQEFLGFLLDGLQEDLSRIKKKPYIEKPDST---DEMIGNE 958
Query: 451 --------ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTV 502
E W + R+DS+I D+F G YKSTL CPVC KVSITFDPF LTLPLP
Sbjct: 959 EAIRKMAEEVWDITRKRDDSVIADLFTGMYKSTLKCPVCDKVSITFDPFNNLTLPLPIED 1018
Query: 503 TRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
+ +V F N P+ V L KH + L A+S + ++ L+ AE + + F
Sbjct: 1019 LWSASVKFFPLNDR--PVLVEVELPKHSAVELLKKAISDRTGVPVNR-LIGAEEFKGKFF 1075
Query: 563 RFF---ENPAELIS 573
+ + E+ +E I+
Sbjct: 1076 KIYSDNEDASEAIT 1089
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R + I+L CLD F E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS S
Sbjct: 1488 RSKGITLEECLDEFEKAEILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSS 1547
Query: 819 RYLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y ++KLD V+FPI LDL ++ + +DG+ +YDL A+ H+GGLGGGHYTA+AK
Sbjct: 1548 GYRRDKLDVLVDFPIEGLDLRTRVLHQEDGKEEMYDLCAVDEHFGGLGGGHYTAWAK 1604
>gi|443702950|gb|ELU00773.1| hypothetical protein CAPTEDRAFT_224225 [Capitella teleta]
Length = 1175
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 164/282 (58%), Gaps = 3/282 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ LQ L + +L YFL G + EIN N LG G+LA+ F L+
Sbjct: 380 GFTGLDNLGNTCFMNAPLQVLANMGELRDYFLNGQFQSEINQHNVLGSGGKLAVHFAYLM 439
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R +WS + AP K + QF GY QHD+QE +AFLLDGLHEDLNRV +KPY E
Sbjct: 440 RNIWSGSHRSFAPTKLKALVGSKWNQFMGYAQHDAQEFMAFLLDGLHEDLNRVIEKPYTE 499
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA+E W HK RNDS IVD+FQGQYKS LVCPVCSKVSITFDPFM L +
Sbjct: 500 QVDSDGRPDETVADEAWDVHKRRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFMILPV 559
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP R + VT F P F + L K + L + + + L + E
Sbjct: 560 PLPKK-QRLLPVTFFSLEPRKKPTKFILKLSKDAKIEQLKDQIHERTKVP-PKDLRVFEA 617
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEI 598
+ +++ FF A L + D+ V + G+ +E+
Sbjct: 618 HKSRVYSFFGRGASLSNVQATDDIFVFETLSEELAGEPVIEL 659
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ T+ Q I+L CL F E L P+ W+CP CKEHR+ATK+L +W LP+ L
Sbjct: 896 HESVSTLSAEEQGDITLDQCLSLFTEPEVLSPEYTWFCPGCKEHREATKQLSIWRLPNTL 955
Query: 809 VFHLKRFSYSRY-LKNKLDTFVNFPILNLDLSKYM---KSKDGESYVYDLFAISNHYGGL 864
V LKRFS+ + L++K+D +NFP LDLSKY + + +YDLF + NH+GG+
Sbjct: 956 VIQLKRFSFRNFLLRDKIDKQINFPARGLDLSKYYIGNRPSNEPPPIYDLFGVVNHHGGI 1015
Query: 865 GGGHYTAYAK 874
GGHYTAYA+
Sbjct: 1016 MGGHYTAYAR 1025
>gi|242015222|ref|XP_002428271.1| ubiquitin specific protease, putative [Pediculus humanus corporis]
gi|212512845|gb|EEB15533.1| ubiquitin specific protease, putative [Pediculus humanus corporis]
Length = 954
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 281/612 (45%), Gaps = 97/612 (15%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCF+N+ LQCL HT LA+YF + Y ++ N L G GE+
Sbjct: 171 GVIGLRNHGNTCFINAILQCLTHTDCLAEYFVMNQYKADLTRRNKLTSKKYGTKGEVTEQ 230
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ +W FK + ++ Q+ G NQHD+QE L +LLD +HEDLN +
Sbjct: 231 LALLLKSVWHCQYNPDISNQFKVIVDKYGTQYCGNNQHDAQEFLIWLLDKVHEDLNTATK 290
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y K S RPDEEVA E NH N+S + VFQ Q++S+L C C + S TFDPF
Sbjct: 291 KNYKANKSSFDRPDEEVAKETLANHVRCNNSFVHAVFQAQFRSSLTCLNCQRQSNTFDPF 350
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
+ +++P+P R + VTV Y + + ++L ++ +L LS+ + + +
Sbjct: 351 LCVSVPMPHNQKRPIYVTVLYLSQQPRQVKLGLSLNENSTVSELREQLSSDTSIP-ESCM 409
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLE--IVNRWQEKSASD 609
LL ++ + R F IS IK+ + + + + ++E I+ W D
Sbjct: 410 LLTQIDDLGFQRTFSGQLP-ISEIKETDPVYCIETPQLKDASEEMEKYILLCWVNVLTMD 468
Query: 610 YLKGSERKLFGAP-------LVTYLEEEHLSGADID-IAVSKLLS-----PLRRTYSSAK 656
S R FG+P L +Y + + L +++ I ++L+ PL R
Sbjct: 469 --DHSSR--FGSPYTMQLCRLTSYKDIQKLILKEMNTILHDEILTTDQDIPLFRIKIVDG 524
Query: 657 AHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI 716
FL +D L E+ L+L DE DS
Sbjct: 525 VGAESAASFLDPTVD---------------HPLYMEEIDQALALLDE----------DS- 558
Query: 717 LKPGKHIKVLLDW---------TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFS 767
H+K++L+W DD + + S +K L TG ++ +L
Sbjct: 559 --GPSHLKLVLEWDLAAKESTIADDSDFIEEHSSVKQLLFQSGTG--------DSATLEE 608
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF---SYSRYLKNK 824
C D + E LG DD W+CP C ++ KKL LW LPD+LV HLKRF S K
Sbjct: 609 CFDLYTKAEVLGADDKWHCPFCNRKQEVIKKLGLWSLPDILVIHLKRFRQQSCKNRSATK 668
Query: 825 LDTFVNFPILNLDLSKYM------------------KSKDGESY---VYDLFAISNHYG- 862
+ ++FP+ D++ ++ K K SY VYDL+AI NH+G
Sbjct: 669 VMMLIDFPLYGFDMNAHLVGPQRESNNSLTLWSPWRKPKRTTSYDDNVYDLYAICNHHGQ 728
Query: 863 GLGGGHYTAYAK 874
L GGHYTAY +
Sbjct: 729 DLQGGHYTAYCR 740
>gi|301103855|ref|XP_002901013.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262101351|gb|EEY59403.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 1100
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 195/356 (54%), Gaps = 31/356 (8%)
Query: 224 QTLDDAMLQMDQDILLEVQVD-NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTT 282
+ D ++MD + +E+ V N MD+ L V + ++ T+ P ++ +
Sbjct: 387 RVTDVQKIEMDDSLRVELDVGGNKRWMDAQDELLCPVGTHKAVNASTVVASPVSTHSPAS 446
Query: 283 GYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTP 342
YR+ G D + E G+ GL NLGNTCFMNS LQCL++T
Sbjct: 447 SYRY-----------------GRDFEAGRGRPEFEGVVGLSNLGNTCFMNSMLQCLINTA 489
Query: 343 DLAQYFLGD--------YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
L +YFL ++ EIN +NPLGM G +A+ F LLRK+WS+ V P K
Sbjct: 490 PLREYFLKKVPETGTLCFTKEINRDNPLGMKGIMAVDFASLLRKMWSNEFKVVTPTKLKS 549
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWK 454
+ ++APQF+GY Q DSQEL+ FLLDGLHEDLNRVK KPY + + GR D +VA E W+
Sbjct: 550 VIGQYAPQFAGYQQQDSQELMNFLLDGLHEDLNRVKAKPYTKPVERNGRSDADVAREEWQ 609
Query: 455 NHKARNDSLIVDVFQGQYKSTLVC--PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
RNDS+IVD F GQ +S + C C S+TFDP+M L++P+P+ + V +F+
Sbjct: 610 QFLRRNDSVIVDNFMGQLRSHVTCSDADCGHESVTFDPYMSLSVPIPNNEAVGVQVQLFW 669
Query: 513 ANGSGLPMPFTVTLMKHGCC-KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
ANG +PM + + L K C +D LS + I L EV+NH+I + + +
Sbjct: 670 ANGD-IPMKYALHLPKDACSLQDAKEKLSQLSEVPISR-LFFVEVWNHRIIKAYSD 723
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 82/117 (70%), Gaps = 5/117 (4%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR--- 819
++LF CL F E LG D WYCP+CK H +A KK DL+ LP VL+FHLKRF Y++
Sbjct: 945 LTLFDCLAKFTEREQLGEADAWYCPKCKSHVRAFKKFDLFSLPKVLIFHLKRFRYAQNSF 1004
Query: 820 YL-KNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+ ++K+ T V FP+ LDL++++ D G + +YDL+A+S H GGLGGGHYTA AK
Sbjct: 1005 YMHRDKISTLVEFPVQELDLAEFVVGPDSGSARLYDLYAVSEHMGGLGGGHYTAVAK 1061
>gi|384483897|gb|EIE76077.1| hypothetical protein RO3G_00781 [Rhizopus delemar RA 99-880]
Length = 1037
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 280/591 (47%), Gaps = 78/591 (13%)
Query: 12 ENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNI 71
E G L P + +++ L+ L EG ++LIS W+ W++Y C
Sbjct: 4 EGEGRALKIDPKNQVKMITQLQQDH---LLEGQTWYLISKSWFTRWKQY-CS-------- 51
Query: 72 SFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWE 131
SP + PGPI+N I+Q+ D + +L + VP+ W+
Sbjct: 52 RLSSPQQDARKIGEQTNPGPINNQSILQS--------DGTLMDSLILDESVFAVPEAAWK 103
Query: 132 KLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRD------NSQTVIRLSKKAS 185
L WY +++ + VE++ KL D N LS+ ++
Sbjct: 104 DLAEWYGVDSEPIERLVIKKSDGSLTVELYPPIFKLFIVSDVTLASFNRSPRFTLSETST 163
Query: 186 TRQLYEKVCKLRGIEQE-KARIWDYFNKQRSTSPLDVSDQTLDDAML--QMDQDILLEVQ 242
L + + + Q + +IW ++ S + ++ +L +A L +Q ++L
Sbjct: 164 INDLLLTIRESLDLSQNAELQIWLLSDEPNSPT---IASNSLQNATLIDTNNQSVILSRS 220
Query: 243 VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMD 302
I++ G+ A P E + + S+ G FN SS ST
Sbjct: 221 GQFNIAVVIKGD--ARFPAETFIKHSDSSSISSTSSIFANG--FNSLTASSTEST--PTS 274
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-----DYSDEIN 357
Y + G+ GL NLGNTCFMNSALQCL +TP+L ++FLG +++
Sbjct: 275 GLYPKF-------ARGVCGLHNLGNTCFMNSALQCLSNTPNLTKWFLGMGKKTRVLEKLI 327
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
T+NPLGM+G++A ++G+L+ KLWS + PR FK +
Sbjct: 328 TDNPLGMNGQVAESYGELIEKLWSGNAQSYTPRDFK-----------------------Y 364
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
+DGLHEDLNR+ +KPYIE+ D G D+E+A W H+ARNDS+IVD+FQGQ+KSTL+
Sbjct: 365 TIDGLHEDLNRIIKKPYIELPDFDGMKDKEIAERSWNYHRARNDSVIVDLFQGQFKSTLI 424
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA--NGSGLPMPFTVTLMKHGCCKDL 535
C C VS+TFDPFMYL+LPLP + R TV Y + + +TL K L
Sbjct: 425 CAECKNVSVTFDPFMYLSLPLP--IERKCKKTVVYVPYDPTQRMQRVVLTLNKDADIAQL 482
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
++ +K LL+ E+++H+I++ F + E+++ I + + I Y+
Sbjct: 483 QKEVAKIMSVKDASTLLVVEIFSHKIYKVFSH-YEVVARIGNSDLIYVYQL 532
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 15/135 (11%)
Query: 731 DDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
DD+ EL DP I T +K +Q ++L CLD F EE L +D+WYCP+CK
Sbjct: 885 DDIKELGDPDNIN-------TSQADQKKKQ--LTLSDCLDEFTKEEELSEEDLWYCPKCK 935
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY 850
+H+ A KK DLW +P++LV HLKRFS+SR ++K+DT ++FPI LDL+ + S D E+
Sbjct: 936 KHQMAIKKFDLWHMPEILVVHLKRFSHSRTWRDKIDTLIDFPIEELDLTDRVLSVDKETV 995
Query: 851 ------VYDLFAISN 859
+YDL+A+ N
Sbjct: 996 NEENRLIYDLYAVDN 1010
>gi|119610761|gb|EAW90355.1| hCG1991532, isoform CRA_b [Homo sapiens]
Length = 1406
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 589
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 590 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 650 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 709
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 710 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 767
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 768 HDSNIKNF 775
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG +M+YC +CK H ATKKLDLW LP L
Sbjct: 1017 HESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKCKTHCLATKKLDLWRLPPFL 1076
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + K V F + D S ++ +D
Sbjct: 1077 IIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLVPRD 1114
>gi|109638751|ref|NP_004496.2| ubiquitin carboxyl-terminal hydrolase 6 [Homo sapiens]
gi|50403738|sp|P35125.2|UBP6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 6; AltName:
Full=Deubiquitinating enzyme 6; AltName:
Full=Proto-oncogene TRE-2; AltName: Full=Ubiquitin
thioesterase 6; AltName:
Full=Ubiquitin-specific-processing protease 6
gi|24474450|gb|AAN38838.1| ubiquitin-specific protease USP6 [Homo sapiens]
Length = 1406
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 589
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 590 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 650 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 709
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 710 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 767
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 768 HDSNIKNF 775
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG +M+YC +CK H ATKKLDLW LP L
Sbjct: 1017 HESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKCKTHCLATKKLDLWRLPPFL 1076
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + K V F + D S ++ +D
Sbjct: 1077 IIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLVPRD 1114
>gi|195128583|ref|XP_002008742.1| GI11648 [Drosophila mojavensis]
gi|193920351|gb|EDW19218.1| GI11648 [Drosophila mojavensis]
Length = 1765
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 270/552 (48%), Gaps = 94/552 (17%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDN+++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 481 RPGPIDNNNLITTNPYRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 540
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKL---------------------------------- 167
LPR++I + +E +E++ L L++
Sbjct: 541 PLPRQVI-QPPNSEVELELYPLNLRILLHQMQSAPNGSGAGTQITSWGSTTSGGYGVLAS 599
Query: 168 ------IDSRDNSQTVIR-------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
I + Q R S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 600 GGGYAAIAASSVPQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKPEDIRLWH------ 653
Query: 215 STSPLDVSDQTLDDAMLQMDQDIL----LEVQVDNGISMDSTGNDLALVPIEPSRSSLTI 270
+ S +LD++ + +++D + L ++ ++ + ++ DL P E S + T
Sbjct: 654 ----VPPSSASLDNSAILLEEDTMCLKELLIRDNDQLLLEIRNKDLTW-PEELSSLASTQ 708
Query: 271 AGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCF 330
+G + G R + S+ M + G GL NLGNTCF
Sbjct: 709 SGQAGVGPGDRR--RLTR-------SSIMSV-------------HAPGATGLHNLGNTCF 746
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MN+ALQ L +T LAQYF + E+N N LG G+LA+ + +LL+++W++ +VAP
Sbjct: 747 MNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYAELLKEVWTATTRSVAP 806
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
+ + + APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA
Sbjct: 807 LKLRFCVNKHAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSDGRPDKIVA 866
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP + V
Sbjct: 867 AEAWAQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYLEVL 926
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
V +GS +P+ + + L DL L+T C L+ +L+ E++N QI + +
Sbjct: 927 VILLDGS-VPIKYGLRLNSECKYGDLKHKLATLCPLQ-PSLMLVCEIWNSQIRQVVGDEE 984
Query: 570 ELISSIKDDEHI 581
+L + D ++
Sbjct: 985 KLRTQSSKDLYV 996
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 664 GFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHI 723
G LP + NS +V T ++ C + + T E +S + K +
Sbjct: 1382 GALPPI-----NSMANNVGTPQMNAKCPSLPNLEAKRTTEYTTS---LSYTPTTKYFEDF 1433
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L +
Sbjct: 1434 TIAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL---EQ 1490
Query: 784 WY-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
WY C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1491 WYHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYL 1550
Query: 843 KSKDGESYV 851
S E+ +
Sbjct: 1551 ASVPQETIL 1559
>gi|291393657|ref|XP_002713460.1| PREDICTED: ubiquitin thioesterase 19 isoform 1 [Oryctolagus
cuniculus]
Length = 1322
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 536 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 595
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 596 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 655
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 656 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 715
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 716 PLPQK-QKVLPVFYFAREPHSKPVKFLVSVSKESSSASEVLDSLSQSVHVK-PENLRLAE 773
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 774 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSPELAKERVVVLEVQQRPQVPS 826
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 1079 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 1138
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 1139 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPNYDLYAVINH 1198
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 1199 YGGMIGGHYTACARL 1213
>gi|195020247|ref|XP_001985155.1| GH14664 [Drosophila grimshawi]
gi|193898637|gb|EDV97503.1| GH14664 [Drosophila grimshawi]
Length = 1764
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 263/534 (49%), Gaps = 94/534 (17%)
Query: 87 ERPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
+RP PIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 479 QRPSPIDNSNLITPNPYRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDN 538
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNS-------------------------- 174
LPR++I + +E +E++ L L+++ + +
Sbjct: 539 LPLPRQVI-QPPNSEVELELYPLNLRILLHQLQTASTGSGAASTQITSWGSTVSAGYGVL 597
Query: 175 -----------QTVIRLSKK-----------ASTRQLYEKVCKLRGIEQEKARIWDYFNK 212
+V++ K+ A+ RQ+ E +C ++ E R+W
Sbjct: 598 ASGGGYAAIAASSVLQAPKRYLAYTAAFSRLATVRQVGEFLCDQLRLKPEDIRLWH---- 653
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDIL----LEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
+ S TLD++ + +++D + L ++ ++ + ++ DL P E S +
Sbjct: 654 ------VPPSSATLDNSAILLEEDTMCLKELLIRDNDQLLLEIRNKDLTW-PEELSSLAS 706
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNT 328
T +G ++ PG D + + G GL NLGNT
Sbjct: 707 TQSGQAGVA-----------CPG----------DRRRMTRTSIMSVHAPGATGLHNLGNT 745
Query: 329 CFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAV 387
CFMN+ALQ L +T LAQYF + E+N N LG G+LA+ + +LL+++W++ +V
Sbjct: 746 CFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELLKEVWTATTRSV 805
Query: 388 APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE 447
AP + + + APQFSG QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+
Sbjct: 806 APLKLRFCVNKHAPQFSGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKI 865
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
VA E W H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP +
Sbjct: 866 VAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLSCGHESVRFDPFSLLSLPLPVENYVYLE 925
Query: 508 VTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
V V +GS +P+ + + L DL L+T C L+ +L+ E++N QI
Sbjct: 926 VLVILLDGS-VPIKYGLRLNSECKYADLKHKLATLCPLQ-PSLMLVCELWNSQI 977
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1433 IAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL---EQW 1489
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1490 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1549
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1550 SVPQETIL 1557
>gi|37330|emb|CAA45108.1| oncogene [Homo sapiens]
gi|119610760|gb|EAW90354.1| hCG1991532, isoform CRA_a [Homo sapiens]
gi|222080034|dbj|BAH16658.1| ubiquitin specific peptidase 6-short [Homo sapiens]
Length = 786
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 162/245 (66%), Gaps = 3/245 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 589
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 590 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 650 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 709
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 710 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 767
Query: 557 YNHQI 561
++ I
Sbjct: 768 HDSNI 772
>gi|291393659|ref|XP_002713461.1| PREDICTED: ubiquitin thioesterase 19 isoform 2 [Oryctolagus
cuniculus]
Length = 1360
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 176/294 (59%), Gaps = 8/294 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPVFYFAREPHSKPVKFLVSVSKESSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQEKS 606
V ++ R F P+ + ++ + ++ + + K + LE+ R Q S
Sbjct: 775 VIKNRFHRVF-LPSHSLDTVSPSDVLLCFELLSPELAKERVVVLEVQQRPQVPS 827
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 9/168 (5%)
Query: 714 DSILKPGKHIKVLLDWTDDVHELYDPSYI----KDLPVVHKTGFTVKKTRQEAISLFSCL 769
D+ L+ G + L W ++ P ++ K+L G + R +L CL
Sbjct: 1050 DTPLELGDDCSLALVWRNNERL---PEFVLVASKELECAEDPGSAGEAARAGHFTLDQCL 1106
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTF 828
+ F E L P++ WYCPQCK+HR+A+K+L LW LP+VL+ LKRFS+ ++ ++K++
Sbjct: 1107 NLFTRPEVLAPEEAWYCPQCKQHREASKQLLLWRLPNVLIVQLKRFSFRSFIWRDKINDL 1166
Query: 829 VNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
V FP+ NLDLSK+ + K+ + YDL+A+ NHYGG+ GGHYTA A++
Sbjct: 1167 VEFPVRNLDLSKFCIGQKEEQLPNYDLYAVINHYGGMIGGHYTACARL 1214
>gi|47208151|emb|CAF93184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1677
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 181/304 (59%), Gaps = 20/304 (6%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L YFL + EIN NPLG G LA+ F LL
Sbjct: 722 GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFLDRAFEGEINCSNPLGTGGRLAIGFAVLL 781
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 782 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 841
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GR DE VA+E W+ HK RNDS IVD+FQGQ+KS LVCP+CSKVSITFDPF+YL +
Sbjct: 842 TVDSDGRLDEVVADEAWQRHKMRNDSFIVDLFQGQFKSKLVCPMCSKVSITFDPFLYLPV 901
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMP--------------FTVTLMKHGC-CKDLILALST 541
PLP + ++V F P+ F+V++ K +++ ++S
Sbjct: 902 PLPQK-QKVLSVYYFAKEPHKKPIKASLPCIASVLLRKRFSVSVSKENSHTAEVLESISR 960
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNR 601
+ +K E L LAEV ++ R F P+ + ++ + + + K+ K K+ ++ R
Sbjct: 961 SVRVKA-ENLRLAEVGKNRFQRMFL-PSHSLDTVSSSDMLFCFELLSKEMAKEKV-VLLR 1017
Query: 602 WQEK 605
Q+K
Sbjct: 1018 VQQK 1021
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 20/152 (13%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
KDL + R +L CL+ F E L P++ WYCP+C++HR+A+K+L LW
Sbjct: 1333 KDLDYEEDPSSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLW 1392
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPI---------------LNLDLSKY---MK 843
LP+VL+ LKRFS+ ++ ++K++ V+FPI NLDLS++ MK
Sbjct: 1393 RLPNVLIIQLKRFSFRSFIWRDKINDMVDFPIRQLVPWPLLDGRFDFRNLDLSRFCIGMK 1452
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+ + VYDL+A+ NHYGG+ GGHYTAYA++
Sbjct: 1453 D-EMQQPVYDLYAVINHYGGMIGGHYTAYARL 1483
>gi|37334|emb|CAA45111.1| oncogene [Homo sapiens]
Length = 1089
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 213 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 272
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 273 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 332
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 333 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 392
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 393 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 450
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 451 HDSNIKNF 458
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG +M+YC +CK H ATKKLDLW LP L
Sbjct: 700 HESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKCKTHCLATKKLDLWRLPPFL 759
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + K V F + D S ++ +D
Sbjct: 760 IIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLVPRD 797
>gi|119610762|gb|EAW90356.1| hCG1991532, isoform CRA_c [Homo sapiens]
Length = 1089
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 213 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 272
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 273 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 332
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 333 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 392
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 393 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 450
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 451 HDSNIKNF 458
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG +M+YC +CK H ATKKLDLW LP L
Sbjct: 700 HESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKCKTHCLATKKLDLWRLPPFL 759
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + K V F + D S ++ +D
Sbjct: 760 IIHLKRFQFVNDQWIKSQKIVRFLRESFDPSAFLVPRD 797
>gi|332848886|ref|XP_001138469.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Pan
troglodytes]
Length = 604
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 162/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 158 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 217
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 218 QELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 277
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W N RN S++VD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 278 LKDSDGRPDWEVAAEAWDNQLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 337
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L LS C L E +LLAEV
Sbjct: 338 PLPMDSYMQLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLSDLCGLN-SEQILLAEV 395
Query: 557 YNHQIFRF 564
+ I F
Sbjct: 396 HGSNIKNF 403
>gi|194874431|ref|XP_001973398.1| GG16065 [Drosophila erecta]
gi|190655181|gb|EDV52424.1| GG16065 [Drosophila erecta]
Length = 1760
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 255/536 (47%), Gaps = 88/536 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 490 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 549
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQT------------------------ 176
LPR++I + ++ +E++ L L+ L+ SQT
Sbjct: 550 PLPRQVI-QPPNSDVELELYPLNLRILLHQVQPSQTGGGTQLGSWGSTVSGGYGVLASGG 608
Query: 177 --------------------VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRST 216
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 609 GYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDNGA 668
Query: 217 SPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL 276
L+ L + +++ + +LLE++ + + G ++A +
Sbjct: 669 ILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQSG 713
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
T G R + SS S G GL NLGNTCFMN+ALQ
Sbjct: 714 QGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAALQ 755
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 756 VLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLRFC 815
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 816 VNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAWSQ 875
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V +G
Sbjct: 876 HHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENFIYFEVLVILLDG 935
Query: 516 SGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
S +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 936 S-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLADDEKL 989
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1431 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1487
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1488 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1547
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1548 SVPQETIL 1555
>gi|195354286|ref|XP_002043629.1| GM19676 [Drosophila sechellia]
gi|194127797|gb|EDW49840.1| GM19676 [Drosophila sechellia]
Length = 1760
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 490 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 549
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 550 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 608
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 609 GGGYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 668
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 669 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 713
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 714 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 755
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 756 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 815
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 816 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 875
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 876 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYFEVLVILL 935
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 936 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 991
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1431 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1487
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK ++ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1488 YHCSHCKGKKRATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1547
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1548 SVPQETIL 1555
>gi|410050929|ref|XP_003952996.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 6 [Pan troglodytes]
Length = 1406
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 162/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 589
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 590 QELWSGTQKSVAPLKLRRTIAKYAPRFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 650 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 709
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G P+ + + L L L C L E +LLAEV
Sbjct: 710 PLPMDSYMDLEITVIKLDGI-TPVRYGLRLNMDEEYTGLKKQLRDLCGLN-SEQILLAEV 767
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 768 HDSNIKNF 775
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG +M+YC +CK H ATKKLDLW LP L
Sbjct: 1017 HESVEQSRRAQAEPINLDSCLRAFTSEEELGESEMYYCSKCKTHCLATKKLDLWRLPPFL 1076
Query: 809 VFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + K V F + D S ++ +D
Sbjct: 1077 IIHLKRFQFVNDXWIKSQKIVKFLQESFDPSAFLVPRD 1114
>gi|442633502|ref|NP_001262074.1| CG8334, isoform B [Drosophila melanogaster]
gi|440216034|gb|AGB94767.1| CG8334, isoform B [Drosophila melanogaster]
Length = 1715
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 426 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 485
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 486 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 544
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 545 GGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 604
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 605 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 649
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 650 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 691
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 692 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 751
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 752 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 811
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 812 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILL 871
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 872 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 927
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1386 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1442
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1443 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1502
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1503 SVPQETIL 1510
>gi|170050063|ref|XP_001870989.1| ubiquitin specific protease [Culex quinquefasciatus]
gi|167871652|gb|EDS35035.1| ubiquitin specific protease [Culex quinquefasciatus]
Length = 1755
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 260/532 (48%), Gaps = 89/532 (16%)
Query: 89 PGPIDNSDII------QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
PG IDN ++I Q + EG L+ L + +D+ LVP +W+ L WY G
Sbjct: 450 PGVIDNGNLIAPVMYKQIPTLTGEGGRLKRDLTLVQHRDFELVPDSLWKALSQWYDGPLP 509
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLIDSRD-----------NS----------------- 174
LPR++I E +E++ L L+++ ++ NS
Sbjct: 510 LPRQVIQPLSSAEVELELYPLNLRILRHQNPPAQQQQQQQSNSTWGSISGGYGALTSAGQ 569
Query: 175 -----QTVIRLSKK-----------ASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSP 218
+V++ KK A+ +Q+ E +C+ + E R+W +P
Sbjct: 570 GYPTVSSVLQPPKKYLAYTAAFSRLATVKQVAEFLCQRLKLRVEDIRLWHLV-----PTP 624
Query: 219 LDVSD--QTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPAL 276
V++ L++ +L + + L + ++ + ++ DL P E SLTIA
Sbjct: 625 TGVTEFPYLLEEDILTLQE---LSIADNDQLLLEIRNKDLTW-PEE--LGSLTIAH---- 674
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
SN HT R + ++ G GL NLGNTCFMN+ALQ
Sbjct: 675 SNSHTNLER-------------------RGTVSSIHSQHPPGATGLHNLGNTCFMNAALQ 715
Query: 337 CLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGK 395
L +T LAQYF + E+N N LG G+LA+ + +LLR++W++ + ++AP +
Sbjct: 716 VLFNTQPLAQYFAKRMHLYELNVNNKLGTKGQLAMRYAELLREVWTASQRSIAPLKLRFC 775
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKN 455
+ + APQFSG QHDSQELL +LLD LHEDLNRV +KPY E+KDS GR D VA E W
Sbjct: 776 VTKHAPQFSGGGQHDSQELLDWLLDSLHEDLNRVMEKPYSELKDSDGRADVVVAAEAWSQ 835
Query: 456 HKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANG 515
H ARN S+IVD+F GQ KS + C C + S+ FDPF L+LPLP V V +G
Sbjct: 836 HHARNQSIIVDLFYGQLKSKVTCSGCGRDSVRFDPFSLLSLPLPVENYTYCEVLVSLLDG 895
Query: 516 SGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
S +P+ + + L DL AL C L+ E LL+ E+ N QI N
Sbjct: 896 S-VPVKYGLRLNSEQKYWDLKKALGEMCGLE-PELLLICELSNSQIRCILPN 945
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 723 IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
I++ +DW L S + L H++ ++ + E + L CL AF +EE L +
Sbjct: 1377 IQIAIDWDPTALHLRYQSTRERLWTEHESVAICRRQQTEPVDLDHCLRAFTSEEKL--EQ 1434
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
++C CK+ + ATKKL +W LP +L+ HLKRF++ K VNFP + D + Y+
Sbjct: 1435 YYHCSHCKQKKPATKKLQIWKLPPILIVHLKRFNFVNNKWVKSQKVVNFPYEDFDPTPYL 1494
Query: 843 KSKDGES 849
S E+
Sbjct: 1495 ASVPQET 1501
>gi|442633504|ref|NP_001262075.1| CG8334, isoform C [Drosophila melanogaster]
gi|440216035|gb|AGB94768.1| CG8334, isoform C [Drosophila melanogaster]
Length = 1696
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 426 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 485
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 486 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 544
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 545 GGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 604
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 605 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 649
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 650 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 691
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 692 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 751
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 752 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 811
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 812 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILL 871
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 872 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 927
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1367 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1423
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1424 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1483
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1484 SVPQETIL 1491
>gi|24667051|ref|NP_649153.1| CG8334, isoform A [Drosophila melanogaster]
gi|23093095|gb|AAF49100.3| CG8334, isoform A [Drosophila melanogaster]
Length = 1736
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 426 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 485
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 486 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 544
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 545 GGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 604
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 605 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 649
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 650 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 691
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 692 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 751
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 752 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 811
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 812 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILL 871
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 872 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 927
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1407 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1463
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1464 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1523
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1524 SVPQETIL 1531
>gi|442633508|ref|NP_001262077.1| CG8334, isoform E [Drosophila melanogaster]
gi|440216037|gb|AGB94770.1| CG8334, isoform E [Drosophila melanogaster]
Length = 1712
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 426 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 485
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 486 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 544
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 545 GGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 604
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 605 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 649
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 650 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 691
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 692 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 751
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 752 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 811
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 812 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILL 871
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 872 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 927
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1383 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1439
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1440 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1499
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1500 SVPQETIL 1507
>gi|442633506|ref|NP_001262076.1| CG8334, isoform D [Drosophila melanogaster]
gi|440216036|gb|AGB94769.1| CG8334, isoform D [Drosophila melanogaster]
Length = 1693
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 255/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 426 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 485
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 486 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 544
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 545 GGGYAAIAVSSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 604
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 605 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 649
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 650 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 691
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 692 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 751
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 752 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 811
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 812 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYIYFEVLVILL 871
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 872 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 927
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1364 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1420
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1421 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1480
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1481 SVPQETIL 1488
>gi|347965501|ref|XP_321947.5| AGAP001209-PA [Anopheles gambiae str. PEST]
gi|333470482|gb|EAA01803.6| AGAP001209-PA [Anopheles gambiae str. PEST]
Length = 1958
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 254/539 (47%), Gaps = 97/539 (17%)
Query: 89 PGPIDNSDII------QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
PG IDNS +I Q + EG L+ L + +D+ LVP +W+ L WY G
Sbjct: 558 PGTIDNSCLIAPNIYKQIPTLTGEGGRLKRDLTLVQHRDFELVPDSLWKALAQWYGGPLP 617
Query: 143 LPRKMIS-EGIVNEKRVEVFXLCLKLI--------------------------------- 168
LPR++I + +E++ L L+++
Sbjct: 618 LPRQVIQPHSNAGDVELELYPLNLRILRHQSQPPPHQQQHGQMGGNSAWASMSGGYGALT 677
Query: 169 -----DSRDNSQTVIRLSKK-----------ASTRQLYEKVCKLRGIEQEKARIWDYFNK 212
+ + TV+ KK A+ +Q+ E +C+ ++ E R+W
Sbjct: 678 TGSYPTTVSSVPTVLHPPKKYLAYTAAFSRLATVKQVAEFLCQRLKLKPEDIRLWHLV-- 735
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA- 271
+P +S+ +L+ D L E+ + + ND L+ I LT
Sbjct: 736 ---PTPTGISEFPY---LLEEDHLTLHELSIGD--------NDQVLLEIR--NKDLTWPE 779
Query: 272 --GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTC 329
G ALS G GST MD S + G GL NLGNTC
Sbjct: 780 ELGSLALSQGS--------------GSTSMDRRGTVASIQSQ---HPPGATGLHNLGNTC 822
Query: 330 FMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVA 388
FMN+ALQ L +T L QYF+ + E+NT N +G G+L L + +LLR +W++ ++A
Sbjct: 823 FMNAALQVLFNTQPLTQYFIQKKHLYELNTSNKMGTKGQLVLRYAELLRDVWTASTRSIA 882
Query: 389 PRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV 448
P + + + APQFSG QHDSQELL +LLD LHEDLNRV +KPY E+KDS GR D V
Sbjct: 883 PLKLRFCVTKHAPQFSGGGQHDSQELLDWLLDSLHEDLNRVMEKPYTELKDSDGRSDVIV 942
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A E W H ARN S+IVD+F GQ KS + C C + S+ FDPF L+LPLP V
Sbjct: 943 ATEAWSQHHARNQSIIVDLFYGQLKSKVTCQGCGRDSVRFDPFSLLSLPLPVENYTYCEV 1002
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
V +GS +P+ + + L DL LS C L+ D+ +L+ E+ N QI N
Sbjct: 1003 LVMLLDGS-VPVKYGLRLNSEMKYWDLKKHLSELCGLEPDQ-MLICELSNSQIRLVLPN 1059
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 720 GKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLG 779
+ I++ +DW L S + L VH++ +K + E + L CL AF +EE L
Sbjct: 1550 ARSIQIAIDWDPTALHLRYQSTRERLWTVHESVAVCRKQQTEPVDLDHCLRAFTSEEKL- 1608
Query: 780 PDDMWY-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL 838
+ WY C CK+ + ATKKL +W LP +L+ HLKRF+Y K VNFP + D
Sbjct: 1609 --EQWYHCSHCKQKKPATKKLQIWKLPPILIVHLKRFNYVNGKWVKSQKVVNFPYEDFDP 1666
Query: 839 SKYMKSKDGESYV 851
+ Y+ S E+ +
Sbjct: 1667 TPYLASVPQETIL 1679
>gi|157125302|ref|XP_001654280.1| ubiquitin specific protease [Aedes aegypti]
gi|108873655|gb|EAT37880.1| AAEL010184-PA [Aedes aegypti]
Length = 1801
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 250/523 (47%), Gaps = 85/523 (16%)
Query: 89 PGPIDNSDII------QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPA 142
PG IDN +I Q + EG L+ L + +D+ LVP +W+ L WY G
Sbjct: 506 PGMIDNQSLIAPILYKQIPTLTGEGGRLKRDLTLVQHRDFELVPDSLWKALSQWYGGPLP 565
Query: 143 LPRKMISEGIVNEKRVEVFXLCLKLI-------DSRDNSQTV------------------ 177
LPR++I + +E++ L L+++ + NS +
Sbjct: 566 LPRQVIQPLSTGDVELELYPLNLRILRHQIPSPQQQQNSNSAWSNISGGYGALTSGSYSN 625
Query: 178 -----------------IRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLD 220
S+ A+ +Q+ E +C+ + E R+W + +P
Sbjct: 626 TSASNALQPPKKYLAYTAAFSRLATVKQVAEFLCQRLKLRVEDIRLW-----HLAPTPNG 680
Query: 221 VSDQTLDDAMLQMDQDILLEVQV-DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNG 279
V++ +L+ D + L E+ + DN + N P E SLTIA SN
Sbjct: 681 VTEFPY---LLEEDNNTLQELSISDNDQLLLEIRNKDLTWPEE--LGSLTIAH----SNS 731
Query: 280 HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLV 339
H R + + + G GL NLGNTCFMN+ALQ L
Sbjct: 732 HNNLERRG-------------------TIASIQSQHPPGATGLHNLGNTCFMNAALQVLF 772
Query: 340 HTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR 398
+T L QYF+ + E+N N LG G+LA+ + +LLR++W++ + ++AP + + +
Sbjct: 773 NTQPLTQYFIRQMHMYELNMANKLGTKGQLAMRYAELLREVWTASQRSIAPLKLRFCVTK 832
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKA 458
APQFSG QHDSQELL +LLD LHEDLNRV +KPY E+KDS GR D VA E W H A
Sbjct: 833 HAPQFSGGGQHDSQELLDWLLDALHEDLNRVMEKPYSELKDSDGRADVVVAAEAWNQHHA 892
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL 518
RN S+IVD+F GQ KS + C C + S+ FDPF L+LPLP V V +GS +
Sbjct: 893 RNQSIIVDLFYGQLKSKVTCTGCGRDSVRFDPFSLLSLPLPVENYTYCEVLVTMLDGS-V 951
Query: 519 PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
P+ + + L DL LS C L E +L+ E+ N QI
Sbjct: 952 PVKYGLRLNSEMKYWDLKKQLSDLCALD-PELMLICELSNSQI 993
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 722 HIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPD 781
+I++ +DW L S + L H++ +K + E + L CL AF +EE L
Sbjct: 1438 NIQIAIDWDPTALHLRYQSTRERLWTEHESVAICRKQQTEPVDLDHCLRAFTSEEKL--- 1494
Query: 782 DMWY-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSK 840
+ WY C CK+ + ATKKL +W LP VL+ HLKRF++ K VNFP D +
Sbjct: 1495 EQWYHCSHCKQKKPATKKLQIWKLPPVLIVHLKRFNFVNNKWVKSQKVVNFPYDEFDPTP 1554
Query: 841 YMKSKDGESYV 851
Y+ S E+ +
Sbjct: 1555 YLASVPQETIL 1565
>gi|195496105|ref|XP_002095552.1| GE19632 [Drosophila yakuba]
gi|194181653|gb|EDW95264.1| GE19632 [Drosophila yakuba]
Length = 1758
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 256/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDN+++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 490 RPGPIDNNNLITVNPFRNVRTLTGEGGHLKRDLPLVQNHDFELVPKSLWKALNRWYGDNL 549
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ SQT +
Sbjct: 550 PLPRQVI-QPPNSDVELELYPLNLRILLHQVQPSQTGVGGGTQLGSWGSTVSGGYGVLAS 608
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 609 GGGYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 668
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 669 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 713
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
+ T G R + SS S G GL NLGNTCFMN+A
Sbjct: 714 SGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 755
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 756 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 815
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 816 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAEAW 875
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 876 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYFEVLVILL 935
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 936 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLADDEKL 991
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1429 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1485
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1486 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1545
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1546 SVPQETIL 1553
>gi|194751941|ref|XP_001958282.1| GF23599 [Drosophila ananassae]
gi|190625564|gb|EDV41088.1| GF23599 [Drosophila ananassae]
Length = 1748
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 259/548 (47%), Gaps = 90/548 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ L+P+ +W+ L WY
Sbjct: 489 RPGPIDNSNLITANPYRNVRTLTGEGGHLKRDTPLAQNHDFELIPKSLWKALNRWYGDNL 548
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQT------------------------ 176
LPR+ + + ++ +E++ L L+ L+ SQT
Sbjct: 549 PLPRQ-VIQPPNSDVDLELYPLNLRILLHQAQPSQTGAAGGSQLGSWGSTVSGGYGVLAS 607
Query: 177 ----------------------VIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ + +C+ ++ E R+W
Sbjct: 608 GGGYAAIAASSVLQPPKRYLAYTAAFSRLATIRQVGDFLCEQLRLKSEDIRLWHVPYPDT 667
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 668 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLASAQ 712
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
+ T G R + SS S G GL NLGNTCFMN+A
Sbjct: 713 SGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 754
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 755 LQVLFNTQPLAQYFQREMHRFELNATNKLGTRGQLAMRYAELLKEVWTATTRSVAPLKLR 814
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ + APQF+G QHDSQELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E W
Sbjct: 815 FCVNKHAPQFAGGGQHDSQELLEWLLDALHEDLNRVTEKPYSELKDSNGRPDKIVAAEAW 874
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP + V V
Sbjct: 875 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYLEVLVILL 934
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELIS 573
+GS +P+ + + L DL L+T C L+ +L+ E++N QI + + +L
Sbjct: 935 DGS-VPIKYGLRLNSECKYADLKNKLATLCNLQ-PSLMLICELWNSQIRQVLADEEKLRP 992
Query: 574 SIKDDEHI 581
D +I
Sbjct: 993 QSAKDLYI 1000
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1423 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1479
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1480 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 1539
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1540 SVPQETIL 1547
>gi|320165140|gb|EFW42039.1| NY-REN-60 antigen [Capsaspora owczarzaki ATCC 30864]
Length = 2127
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 166/262 (63%), Gaps = 3/262 (1%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K E+ GL GL NLGNTCF+NSALQC+ +T L QYFL G ++ E N NP+GM GE+A
Sbjct: 1228 KLPEEKGLTGLHNLGNTCFLNSALQCVNNTQPLTQYFLNGLHTYEFNVNNPIGMKGEVAK 1287
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+ L++++W+ +V+P + +A++ P+FS + QHD+QE LAFLLDGLHEDLNRV
Sbjct: 1288 QYAALVQQVWAGTSTSVSPAKLRSTIAKYEPRFSSFQQHDAQEFLAFLLDGLHEDLNRVL 1347
Query: 431 QKPYIEMKD-SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPY+E+KD G PDE VA + W NH RN S+IVD+F GQ KS + C C+ +S++FD
Sbjct: 1348 SKPYVELKDCEDGTPDEIVAAQWWDNHFKRNRSIIVDLFHGQLKSQVRCQTCNHISVSFD 1407
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PF +L+LPLP M + A+GS P + +TL L +L+ ++ E
Sbjct: 1408 PFTFLSLPLPVEHDIFMETVLLRADGSP-PSRYGITLDSGNQYSHLKASLAKLANIEEVE 1466
Query: 550 GLLLAEVYNHQIFRFFENPAEL 571
+ LAEV N + RF + E+
Sbjct: 1467 SIALAEVSNSAVLRFLNDSDEI 1488
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
K+++ E ISL CL AF EE LG +D+WYCP+CK+ R+A+KK+D++ LP +LV HLKRF
Sbjct: 1842 KRSQDETISLDDCLKAFTKEEDLGANDLWYCPKCKDFRKASKKMDIFKLPPILVIHLKRF 1901
Query: 816 SYSRYLKNKLDTFVNFPILNLD 837
+ +K V FP N D
Sbjct: 1902 QFVSGRWSKSQKLVQFPEHNFD 1923
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 19/23 (82%)
Query: 852 YDLFAISNHYGGLGGGHYTAYAK 874
YDL+A+SNH G LGGGHY A AK
Sbjct: 2033 YDLYAVSNHMGALGGGHYIANAK 2055
>gi|358387112|gb|EHK24707.1| hypothetical protein TRIVIDRAFT_112293, partial [Trichoderma virens
Gv29-8]
Length = 1572
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 166/271 (61%), Gaps = 10/271 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L++YF+ G +S E+N NPLG +G +A+
Sbjct: 538 RNGRSLGAVGLQNLGNTCYMNSALQCLRAIEELSKYFMTGTFSAELNKTNPLGYNGRVAM 597
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ LLR ++ GR +V PR FK + R F+G+ Q DSQE L FLLD L EDL+R+K
Sbjct: 598 AYNGLLRDIYDEGRGSVVPRDFKSTVGRVRSTFAGWGQQDSQEFLGFLLDALQEDLSRIK 657
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
KPYIE DS P +E+A++ W + R+DS+I D+F G YKSTL CPVC K+
Sbjct: 658 NKPYIEKPDSTDDMINNPAAIKEMADKVWDITRQRDDSVIFDLFTGMYKSTLKCPVCGKI 717
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP TVT F N +P+ F V L KH + L LS
Sbjct: 718 SITFDPFNNLTLPLPVENMWAKTVTFFPLN--DVPVKFEVELSKHSSIETLKSFLSIRTG 775
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ ++ L+ AE + + F+ +EN ++ I
Sbjct: 776 VPVNR-LMGAEEFKDKFFKIYENSGDVSEEI 805
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CLD F E L DMWYCP+CKEHR+A+KK DLW PD L+ HLKRFS S +
Sbjct: 1224 GITLEECLDEFERAEVLSEQDMWYCPRCKEHRRASKKFDLWKSPDYLICHLKRFSSSGWR 1283
Query: 822 KNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++KLD V+FPI LDL S+ ++ +DG+ +YDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1284 RDKLDVLVDFPIEGLDLSSRVIQKEDGKEEIYDLIAVDDHYGGLGGGHYTAYAK 1337
>gi|321478478|gb|EFX89435.1| hypothetical protein DAPPUDRAFT_310510 [Daphnia pulex]
Length = 936
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 147/219 (67%), Gaps = 5/219 (2%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
K G GL NLGNTC+MN+ LQ L +T L YFL + +IN +NPLG G LA+AF
Sbjct: 233 KAGYTGLGNLGNTCYMNAVLQALANTTPLKNYFLDKKFQADINRDNPLGFGGSLAIAFAI 292
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
+LR+LWS R ++ P K LA A QFSGY QHD+QE +AFLLDGLHEDLNRVK KP
Sbjct: 293 ILRQLWSGQRDSIEPSHLKSLLANRASQFSGYAQHDAQEFMAFLLDGLHEDLNRVKTKPL 352
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+S GRPD VA+E W+ +K RNDS+I D+FQGQ+KSTLVCP C +S+TFDPF+YL
Sbjct: 353 TTPVESNGRPDHIVADEAWQVYKMRNDSVIDDLFQGQFKSTLVCPACQNISVTFDPFLYL 412
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
LPLP + + TVTV++ G+ +T K G K
Sbjct: 413 ALPLPPSKS-CFTVTVYF---DGVDESVELTGTKRGAVK 447
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 12/156 (7%)
Query: 723 IKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+K D+ D E DPS D Q ++L CL F+ E L ++
Sbjct: 728 VKSPTDYEDLSQENSDPSADGD-----------TSPNQRRLTLHHCLQQFMQSEVLSKEE 776
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY 841
WYCP+CKEHR+ATK++ +W LP++L LKRFS+ + ++K+D V+FP+ LDLS Y
Sbjct: 777 AWYCPKCKEHREATKQMSVWRLPEILTIQLKRFSFRNLMWRDKIDQKVHFPVEQLDLSPY 836
Query: 842 MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
+ S VYDL+A+ NHYGG+ GHYT++A+ A
Sbjct: 837 LSSITEHGAVYDLYAVVNHYGGILYGHYTSFARCPA 872
>gi|403339921|gb|EJY69221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1228
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 269/561 (47%), Gaps = 95/561 (16%)
Query: 25 ERQIVQDLKNQSD-LDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
E +IV ++ Q+ L +EG Y +IS W+ W +Y + P N+ D+ + +++
Sbjct: 247 EGEIVSEMIKQTKYLPEEEGIKYHIISQLWFNKWLQYTFQEIP---NMIGDTQIEDQMTT 303
Query: 84 KRAE----------------RPGPIDN---------SDIIQNGNGSSEGDDLEVRRNLEE 118
+ E PGPI++ D ++ + ++++ E
Sbjct: 304 LKLEDDKTEQEEVQKDANINHPGPINSLEDLKEITVQDQFLQLKSENQEQEFQIKQTCLE 363
Query: 119 GQDYVLVPQQVWEKLFCWYKGGPALPRKMIS-----------------EGIVN--EKRVE 159
G+D+++V VW LF Y+G +PR I+ E I+ K+V+
Sbjct: 364 GKDFLIVSDDVWNYLFAVYEGND-IPRYSINLLKHQSCSDKDSQSEKKELIIEIFNKKVQ 422
Query: 160 VFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC---KLRGIEQEK-------ARIWD- 208
++ L + +S+ A+ + L EK+ K EQ +R+W
Sbjct: 423 IYILPKMRSHQYLKVAAALYISRLANVKDLREKIASILKESSNEQRSKQELLDISRLWKL 482
Query: 209 -----------YFN-KQRSTSPLDVSDQTLDDA-----MLQMDQDILLEVQVDNGISMDS 251
Y++ + R + PL + Q L D+ + DQD+LL +V + +
Sbjct: 483 DPHESVFEVEKYYDIETRESLPLHIDGQILQDSQNLEDINISDQDVLL-YEVQSAFFL-P 540
Query: 252 TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTA 311
N A +P E + + NQ + S M + +
Sbjct: 541 KNNKFAFIPKEKKEKQIK-----------IKNFLKNQNDENLSESQLMKLP----LQDCL 585
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ GGL GLQNLGNTC+MNS LQCL +T LA+Y + D Y+ IN NPLG G+LA+
Sbjct: 586 NQKSNGGLTGLQNLGNTCYMNSVLQCLSNTEPLAKYLIFDCYTSHINRNNPLGTQGKLAI 645
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
AF +LL +L+ VAP K ++R A QFSG+ QHDSQE+L+FLL+ LHEDLN +
Sbjct: 646 AFSELLYELYVGQENHVAPWDVKNIISRRAVQFSGFAQHDSQEMLSFLLETLHEDLNDIV 705
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+KPYIE KD R DE+VANE W+ K R S++VD+F GQ KS + C VC K+SI+FDP
Sbjct: 706 KKPYIEYKDFDNRKDEDVANEYWEGFKQREKSVLVDLFYGQLKSRVQCTVCGKISISFDP 765
Query: 491 FMYLTLPLPSTVTRTMTVTVF 511
F L++P+P + V F
Sbjct: 766 FNMLSVPIPQIKDSFVNVRYF 786
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 13/156 (8%)
Query: 732 DVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
DV EL + ++ + ++AISL+ C++ F EE L +D WYC CK
Sbjct: 1035 DVQELQEQQFVNVDSAPQQQFKKYPTAIKDAISLYDCINWFSQEELLTGNDKWYCSHCKN 1094
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSR-YLKNKLDTFVNFPILNLDLSKYM-------- 842
H+ A KK++++ P+ L+ HLKRFS+ R Y K++ + FPI +LDL+++
Sbjct: 1095 HQNALKKMEIFKAPEYLIIHLKRFSHQRAYSARKIEDVIEFPIEDLDLNEHCLGNKLLLS 1154
Query: 843 ----KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KSK +S YDL+A+SNHYG L GGHYTA+A+
Sbjct: 1155 NPKDKSKAQKSLKYDLYAVSNHYGSLHGGHYTAFAQ 1190
>gi|302915887|ref|XP_003051754.1| hypothetical protein NECHADRAFT_38413 [Nectria haematococca mpVI
77-13-4]
gi|256732693|gb|EEU46041.1| hypothetical protein NECHADRAFT_38413 [Nectria haematococca mpVI
77-13-4]
Length = 1585
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 168/271 (61%), Gaps = 10/271 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQC+ +L +YFL DY DE+N NPLG +G++A+
Sbjct: 528 KSGRSVGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTDDYVDEVNKTNPLGYNGKVAM 587
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G+LL+++++ GR++V PR FK + R P FSG+ Q DSQE L FLLDGL EDL+RVK
Sbjct: 588 TYGNLLKEIYTEGRSSVVPRDFKTTIGRCRPTFSGWGQQDSQEFLGFLLDGLQEDLSRVK 647
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 648 KKPYIEKPDSTDDMINNPAAIKEMADQVWDITRRRDDSVIADLFTGMYKSTLKCPECGKI 707
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP V TV + S P+ V L KH + L +S
Sbjct: 708 SITFDPFNNLTLPLP--VEDVWHGTVTFLPLSDAPVSIEVELPKHSAIEQLKQFVSIRTG 765
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ E L+ E + + F+ ++N ++ I
Sbjct: 766 VP-PERLMGGEEFKDRFFKIYDNTQDVSEEI 795
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CLD F E L DMWYCP+CKEHR+A+KK DLW PD+LV HLKRFS S Y
Sbjct: 1203 GITLEECLDEFERAEILSEQDMWYCPRCKEHRRASKKFDLWKSPDILVAHLKRFSSSGYR 1262
Query: 822 KNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++KLD V+FPI LDL S+ ++ ++G+ +YDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1263 RDKLDVLVDFPIEGLDLTSRVIQKEEGKDEIYDLIAVDDHYGGLGGGHYTAYAK 1316
>gi|315051290|ref|XP_003175019.1| protein kinase subdomain-containing protein [Arthroderma gypseum CBS
118893]
gi|311340334|gb|EFQ99536.1| protein kinase subdomain-containing protein [Arthroderma gypseum CBS
118893]
Length = 1686
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 216/741 (29%), Positives = 330/741 (44%), Gaps = 157/741 (21%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
DE+ V L QS D ++G +++S W + + + S P +
Sbjct: 321 DEQVAQVMQLMQQSPTDKQKG---YIVSATWLKR-----------VLSRSSTHPRPDKTD 366
Query: 83 SKRAE-RPGPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFC 135
AE GP+DNSD++ + S +D + +R L+ G+DY ++P++ W +
Sbjct: 367 KLAAEGEIGPVDNSDLVLVTDPDSIFNDEAGEPFVPMRPGLQMGEDYEILPEEAWNLVMK 426
Query: 136 WY---KGGPALPR---KMISEGIVNEKRVE-------VFXLCLKLIDSRDNSQTVIRLSK 182
WY K PA+ R +EG + + E + L ++ + V L+
Sbjct: 427 WYGLSKQSPAIVRYAHNTNTEGDMEHIQYELNPPIFSILKLSPNASEAEKSKPPVRFLAS 486
Query: 183 KASTRQLYEKVCK-LRGIEQE-KARIWDYFN-----------KQRSTSP----------- 218
+ + Q + K K L I+ K R+W RS SP
Sbjct: 487 RHTPFQQWLKTAKTLASIDMSTKTRVWRILEGLGSSANVTPAASRSASPAPGTTVSAKIP 546
Query: 219 ---------------------LDVSDQTLDDAM----------LQMDQDILLEVQVDNGI 247
+DV DQT + L D I+LE QV
Sbjct: 547 SSISLSLDAFVGLTEGSQRELVDVKDQTANTKYNGKASIHVIGLGSDNVIVLEEQVGG-- 604
Query: 248 SMDSTGNDLALVPIEPSRSS--LTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
+ G L+ E SRSS LT+ G + + N+ SS GS
Sbjct: 605 --PAGGEWLS----ETSRSSNNLTVGAG---TKANVQNRLKNK---SSSGSGRTSPAPSI 652
Query: 306 DSYNTAKK-GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLG 363
+ +K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL
Sbjct: 653 VTRGRRRKDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPSNPLS 712
Query: 364 MHGELALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
+G++A A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL
Sbjct: 713 HNGDVAKAYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGL 772
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYK 473
EDLNR+++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YK
Sbjct: 773 QEDLNRIQKKPYIEKPDST---DEMVHDKAALQRFADRCWEIYKARNDSVITDLFSGMYK 829
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
ST+VCP C KVSI FDPF LTL +P + + + F + P+ V + K+ K
Sbjct: 830 STVVCPDCDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDMDKNSGIK 887
Query: 534 DLILALSTACCLKID-EGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR------ 585
+ + A + +D E L++AE+Y + ++ F++ + I D + I Y
Sbjct: 888 AVKQFI--AQKMNVDAERLVMAEIYKSKFYKLFDHSQSIADHQISDADTIAMYELDGVPT 945
Query: 586 --------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
F+ + ++ + I NR + + S+R FG P+
Sbjct: 946 SYNPDKPRRFRFSSEEPAVGFNSPKADRMLVPIYNRSRMRRG---FGPSQRAFFGVPMYV 1002
Query: 626 YLEEEHLSGADIDIAVSKLLS 646
+ E D D + ++L+
Sbjct: 1003 VITREE--AYDYDAVLRRILA 1021
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 104/159 (65%), Gaps = 13/159 (8%)
Query: 717 LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEE 776
+KPG I +LDW + E YD + V K +K ++ I+L CLD F EE
Sbjct: 1275 VKPGDVI--VLDWNE---ETYDGVF-----VTSKRQLRSRK-KKRGITLDECLDEFGREE 1323
Query: 777 PLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNL 836
L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS +R ++K+D V FP L L
Sbjct: 1324 ILSENDAWYCPRCKEHRRASKKFELWKAPDILVMHLKRFSANRIFRDKIDAVVEFP-LEL 1382
Query: 837 DLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
D+S + ++GES +YDL A+ NHYGGLGGGHYTAYA+
Sbjct: 1383 DMSGRVQMVEEGESMMYDLIAVDNHYGGLGGGHYTAYAR 1421
>gi|17541074|ref|NP_501035.1| Protein H34C03.2 [Caenorhabditis elegans]
gi|351050439|emb|CCD65007.1| Protein H34C03.2 [Caenorhabditis elegans]
Length = 900
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 143/198 (72%), Gaps = 4/198 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFM SA QCL + P L +YFL + Y ++IN +NPLG HG LA+A G+L+
Sbjct: 273 GACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELM 332
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ +WS A++ PR FK + +FAP+F+GY+Q D+ EL+A++LDGLHEDLNR+K+KPYIE
Sbjct: 333 KGMWSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPYIE 392
Query: 437 MKDSGGR-PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
D + P+ E A + W+ +K RNDS+IVD GQ KSTL+CPVC K+SI FDPF YL+
Sbjct: 393 DSDEDAKLPEAEYAAKSWEVYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPFGYLS 452
Query: 496 LPLP--STVTRTMTVTVF 511
LPLP + + + +F
Sbjct: 453 LPLPPKEQIVKQTVIVMF 470
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
TR++ + L LD F T+E LG D WYCPQCK+H +ATK+L LW LP++L+ HLKRF Y
Sbjct: 694 TRRKVL-LQETLDWFTTKEQLGEQDSWYCPQCKKHERATKQLALWKLPEILILHLKRFQY 752
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
+++ + KL V P+ LDL+ + + + E +YDL A+S HYG L GGHYTA
Sbjct: 753 TKWSREKLTWEVVIPVRGLDLTDKVANPNHEKAIYDLIAVSRHYGSLSGGHYTA 806
>gi|116207694|ref|XP_001229656.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
gi|88183737|gb|EAQ91205.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
Length = 1550
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/284 (44%), Positives = 173/284 (60%), Gaps = 11/284 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQC+ +L +YFL + EIN +NPL +G++A
Sbjct: 434 KSGRTLGCVGLQNLGNTCYMNSALQCVRSVEELTKYFLTHEAHKEINPDNPLSHNGDVAA 493
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+G LL +++ ++APR FKG + R+AP FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 494 AYGRLLEEIYKDPAPGSIAPRNFKGIIGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRI 553
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS P E+A + W K R+DS+I D+F G YKSTLVCPVC K
Sbjct: 554 KKKPYIEKPDSTDDMVNNPAAVREMAAKVWDITKKRDDSVIADLFTGMYKSTLVCPVCDK 613
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDPF LTLPLP T T+ F N + P+ V L K+ + + +ST
Sbjct: 614 VSITFDPFNNLTLPLPVANVWTHTIKFFPLNDT--PVDIVVDLNKNSSIRAMKQYISTRV 671
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ E L E ++ + ++ +E+ + + I+ ++ +V + +
Sbjct: 672 GVPT-ERLFAGEEFHSKFYKLYEDGSAVSDEIQGNDIVVVHEIE 714
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 96/141 (68%), Gaps = 7/141 (4%)
Query: 740 SYIKDLPVVHKTGFTVK-KTRQ----EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
+Y+K P++ G K K RQ I+L CLD F EE L D WYCP+CKEHR+
Sbjct: 1094 TYLK-APILEDPGLLAKQKARQLRKKNGIALDDCLDEFEKEEILSEQDTWYCPRCKEHRR 1152
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYD 853
A+KK DLW PD+LV HLKRFS S + ++KLD V+FP+ LDL+K + K DG+ +YD
Sbjct: 1153 ASKKFDLWKTPDILVVHLKRFSSSGWRRDKLDILVDFPVEALDLTKRVIDKEDGKEEIYD 1212
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+ +H+GGLGGGHYTA+AK
Sbjct: 1213 LIAVDDHWGGLGGGHYTAFAK 1233
>gi|115384454|ref|XP_001208774.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196466|gb|EAU38166.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1407
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 199/376 (52%), Gaps = 50/376 (13%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +GE+A
Sbjct: 418 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKQDLNPSNPLAHNGEVAK 477
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 478 AYANLLRMIYDENGQSSFAPRQLKNTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 537
Query: 430 KQKPYIEMKDSGGR------PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS EE AN+CW +KARNDS+I D+F G YKSTLVCP C K
Sbjct: 538 QKKPYIEKPDSTDEMVHNRAALEEFANKCWDIYKARNDSVITDLFAGMYKSTLVCPECKK 597
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +FY + P+ + + K+ K AL
Sbjct: 598 VSIIFDPFNNLTLQLP--IENLWSKEIFYFGLNKKPVIVDIEIDKNASIK----ALKEMV 651
Query: 544 CLKID---EGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYR-------------- 585
K+ + L++ ++Y + ++ F+N + + S I ++ IV +
Sbjct: 652 AKKMGSDPQRLIMCDMYKAKFYKMFDNTSSIADSQISGNDDIVMFEVESVPTNYNPDKPA 711
Query: 586 ----------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
D + ++ + + NR S S K ++R LFG P +Y+
Sbjct: 712 RSYYSFGRSNHEEIPGIDSPKAERLLVPVFNRVVRPSRSGNPKNAQRTLFGVP--SYIVI 769
Query: 630 EHLSGADIDIAVSKLL 645
D D+ K+L
Sbjct: 770 SRQENYDYDVIFKKVL 785
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 125/188 (66%), Gaps = 21/188 (11%)
Query: 706 SSCKP-IQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDL-PVVHKTGFT--------- 754
++ KP +Q ++PG+ I ++DWT++ H+ I+D+ PV +T
Sbjct: 957 NTGKPEVQIVPFVRPGEGI--VVDWTEEAHDALFTGNIRDINPVRGAATWTHVEHVPDPE 1014
Query: 755 ------VKKTR-QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+++TR ++ I+L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+
Sbjct: 1015 LSQRRKLRQTRRKKGITLYECLDEFNKEEILSENDAWYCPRCKEHRRASKKFELWKTPDI 1074
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGG 866
LV HLKRFS SR ++KLD V+FP+ LD+S +++ ++GES +YDLFA+ NHYGGLGG
Sbjct: 1075 LVMHLKRFSASRGFRDKLDVLVDFPVEGLDMSGRVEAPEEGESLIYDLFAVDNHYGGLGG 1134
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 1135 GHYTAYAK 1142
>gi|195591649|ref|XP_002085551.1| GD14834 [Drosophila simulans]
gi|194197560|gb|EDX11136.1| GD14834 [Drosophila simulans]
Length = 1760
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 254/538 (47%), Gaps = 90/538 (16%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPGPIDNS++I + EG L+ L + D+ LVP+ +W+ L WY
Sbjct: 490 RPGPIDNSNLITANPFRNVRTLTGEGGHLKRDTPLVQNHDFELVPKSLWKALNRWYGDNL 549
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVI---------------------- 178
LPR++I + ++ +E++ L L+ L+ +QT +
Sbjct: 550 PLPRQVI-QPPNSDVELELYPLNLRILLHQAQPTQTGVGGGTQLGSWGSTVSGGYGVLAS 608
Query: 179 ------------------------RLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQR 214
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 609 GGGYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKSEDIRLWHVPQLDN 668
Query: 215 STSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGP 274
L+ L + +++ + +LLE++ + + G ++A
Sbjct: 669 GAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELG---------------SLATAQ 713
Query: 275 ALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
T G R + SS S G GL NLGNTCFMN+A
Sbjct: 714 CGQGAGTPGDR-RRLTRSSIMSV-----------------HAPGATGLHNLGNTCFMNAA 755
Query: 335 LQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFK 393
LQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP +
Sbjct: 756 LQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELLKEVWTATTRSVAPLKLR 815
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECW 453
+ ++APQF+G QHDSQELL +LLD LHEDLN V +KPY E+KDS GRPD+ VA E W
Sbjct: 816 FCVNKYAPQFAGGGQHDSQELLEWLLDALHEDLNGVMEKPYSELKDSNGRPDKIVAAEAW 875
Query: 454 KNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYA 513
H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP V V
Sbjct: 876 SQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYFEVLVILL 935
Query: 514 NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+GS +P+ + L L LST C L + +L+ E++N QI + + +L
Sbjct: 936 DGS-VPIKYGFRLNSDCKYSHLKHKLSTMCSLPPNL-MLVCELWNSQIRQVLNDDEKL 991
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1431 IAIDWDPTALHLRYQSTLERLWVDHETIAISRREQVEPVDLNHCLRAFTSEEKL---EQW 1487
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK ++ATKKL +W LP +L+ HLKRF+ K V+FP + D + YM
Sbjct: 1488 YHCSHCKGKKRATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYMA 1547
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1548 SVPQETIL 1555
>gi|198466499|ref|XP_001354019.2| GA20997 [Drosophila pseudoobscura pseudoobscura]
gi|198150628|gb|EAL29756.2| GA20997 [Drosophila pseudoobscura pseudoobscura]
Length = 1775
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 252/530 (47%), Gaps = 91/530 (17%)
Query: 88 RPGPIDNSDIIQNG------NGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
RPG IDNS++I + EG L+ + + D+ LVP+ +W+ L WY
Sbjct: 485 RPGAIDNSNLITANPYRNVRTLTGEGGHLKRDTPIVQSHDFELVPKSLWKALNRWYGDNL 544
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLK-LIDSRDNSQTVIR--------------------- 179
LPR++I + + +E++ L L+ L+ SQT +
Sbjct: 545 PLPRQVI-QPPNTDVELELYPLNLRILLHQAQPSQTSLAAGAGAQLGSWGSTVSGGYGVL 603
Query: 180 ---------------------------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNK 212
S+ A+ RQ+ E +C+ ++ E R+W
Sbjct: 604 ASGGGYAAIAASSVLQPPKRYLAYTAAFSRLATVRQVGEFLCEQLRLKAEDIRLWHVPQL 663
Query: 213 QRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAG 272
L+ L + ++ + +LLE++ + + G+ + ++S G
Sbjct: 664 DNGAILLEEDAMCLKELFIRDNDQLLLEIRNKDLTWPEELGS------LASAQSGQGTGG 717
Query: 273 GPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMN 332
P T S+ M + G GL NLGNTCFMN
Sbjct: 718 APGDRRRLTR-------------SSIMSV-------------HAPGATGLHNLGNTCFMN 751
Query: 333 SALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRA 391
+ALQ L +T LAQYF + + E+N N LG G+LA+ + +LL+++W++ +VAP
Sbjct: 752 AALQVLFNTQPLAQYFQREMHRFELNAANKLGTRGQLAMRYAELLKEVWTATTRSVAPLK 811
Query: 392 FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
+ + + APQF+G QHD+QELL +LLD LHEDLNRV +KPY E+KDS GRPD+ VA E
Sbjct: 812 LRFCVNKHAPQFAGGGQHDTQELLEWLLDALHEDLNRVMEKPYSELKDSNGRPDKIVAAE 871
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W H ARN S+I+D+F GQ KS + C C S+ FDPF L+LPLP + V V
Sbjct: 872 AWSQHHARNQSIIIDLFYGQLKSKVSCLGCGHESVRFDPFSLLSLPLPVENYVYLEVLVI 931
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQI 561
+GS +P+ + + L DL L+T C L+ +L+ E++N QI
Sbjct: 932 LLDGS-VPIKYGLRLNSECKYGDLKHKLATLCPLQ-PSLMLVCELWNSQI 979
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + +
Sbjct: 1429 IAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL--EQWY 1486
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YC CK + ATKKL +W LP +L+ HLKRF+ K V+FP D + Y+ S
Sbjct: 1487 YCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDEFDPTPYLAS 1546
Query: 845 KDGESYV 851
E+ +
Sbjct: 1547 VPQETIL 1553
>gi|154282199|ref|XP_001541912.1| hypothetical protein HCAG_04010 [Ajellomyces capsulatus NAm1]
gi|150412091|gb|EDN07479.1| hypothetical protein HCAG_04010 [Ajellomyces capsulatus NAm1]
Length = 1549
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L QYFL D Y ++N NPL G +A
Sbjct: 509 KDGRSPGVTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPGNPLSHDGNVAK 568
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 569 AYANLLHQLYDDNGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 628
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 629 QKKPYIEKPDSTDDMVGNNAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 688
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 689 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPIRVAVDIDKNASIKALKEYVGQRV 746
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + +
Sbjct: 747 GVPTNR-LVMAEIYKHKFYKMFENTSSI 773
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+C+EHR+A+KK +LW PD+LV HLK
Sbjct: 1160 LRQTRKKRGISLGECLDEFGKEEILSENDAWYCPRCREHRRASKKFELWKCPDILVMHLK 1219
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD+S + ++G+S Y+L A+ NHYGGLGGGHYTAY
Sbjct: 1220 RFSANRGFRDKIDALVDFP-LELDMSGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAY 1278
Query: 873 AK 874
AK
Sbjct: 1279 AK 1280
>gi|448510992|ref|XP_003866441.1| Ubp12 protein [Candida orthopsilosis Co 90-125]
gi|380350779|emb|CCG21001.1| Ubp12 protein [Candida orthopsilosis Co 90-125]
Length = 1293
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 197/364 (54%), Gaps = 30/364 (8%)
Query: 288 QYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
Q+P +F + ++ +D K + GG GL NLGNTC+MNSALQCL+H P++ QY
Sbjct: 308 QFPIDAFVQSHVNTEDN--------KEKAGGHMGLSNLGNTCYMNSALQCLLHVPEINQY 359
Query: 348 FLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGR--AAVAPRAFKGKLARFAPQFS 404
F + Y E+N +NPLG +G++A AFG LL++ + + ++++PR FK + R++ FS
Sbjct: 360 FFHNIYQKELNVDNPLGYNGDVANAFGSLLKQAFDPAKTSSSMSPRDFKYTIGRYSSMFS 419
Query: 405 GYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE---MKDSGGRPDEEVA---NECWKNHKA 458
GY Q DSQELL++LLD LHEDLNR+++KPY E +KD E +A CW HK
Sbjct: 420 GYLQQDSQELLSWLLDALHEDLNRIQKKPYCEKPELKDDEVDDKEAIARLSETCWNQHKQ 479
Query: 459 RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVT--RTMTVTVFYANGS 516
RNDS+I D+F G Y+S LVCP C K SITFDPF LTLPLP T T+ F
Sbjct: 480 RNDSVITDLFTGLYESILVCPDCGKTSITFDPFNDLTLPLPINKKWYHTFTIVDFSGKLP 539
Query: 517 GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA------E 570
M V L DL+ LS + + L L EV+ H I+ F+
Sbjct: 540 NRIMKLEVELKTTSNYDDLVNYLSNFLSVATGD-LFLYEVFQHGIYADFQKNRIKNKFLP 598
Query: 571 LISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
+ IKD + +V Y + + + N + + S ++ FG PL L ++
Sbjct: 599 ITEIIKDGDDVVVYIIPHDSEIDVIIPVFNVVENEDTSYRMEN----YFGVPLFITLTKD 654
Query: 631 HLSG 634
L+
Sbjct: 655 QLNS 658
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 2/121 (1%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ ++L CL +F T E LG D+WYCP C +H++ATK + +W D+L HLKRF
Sbjct: 989 ERQRKSKVTLADCLKSFSTPEVLGEHDLWYCPSCNDHKRATKSIQIWSTGDILTIHLKRF 1048
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSK--DGESYVYDLFAISNHYGGLGGGHYTAYA 873
+R +K+D V+FPI LD++ Y+ + + +YDL A+ NHYGGLGGGHYTA
Sbjct: 1049 HSARAFSDKIDIVVDFPIEGLDIAPYVANPTLQEKDCIYDLIAVDNHYGGLGGGHYTASV 1108
Query: 874 K 874
K
Sbjct: 1109 K 1109
>gi|355754069|gb|EHH58034.1| hypothetical protein EGM_07801, partial [Macaca fascicularis]
Length = 500
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 163/248 (65%), Gaps = 4/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 149 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 208
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + VAP + +A++AP+F+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 209 QELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 268
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E + NH RN S++VD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 269 LKDSDGRPDWEVAAEVY-NHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 327
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L LS C L E +LLAEV
Sbjct: 328 PLPMDSYMHLEITVIKLDGTT-PVRYGLRLNMDEKYTGLKKQLSDLCGLN-SEQILLAEV 385
Query: 557 YNHQIFRF 564
+ I F
Sbjct: 386 HGSNIKNF 393
>gi|358365870|dbj|GAA82492.1| ubiquitin carboxyl-terminal hydrolase [Aspergillus kawachii IFO 4308]
Length = 1663
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 201/378 (53%), Gaps = 53/378 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 692 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAK 751
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++LR+++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 752 AYANMLRQMYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 811
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 812 MKKPYIEKPDST---DEMVHNKEALAEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 868
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + +FY + P+ V + K+ K L
Sbjct: 869 CDKVSIIFDPFNNLTLQLP--IENLWGKEIFYFPLNKKPVLVDVEIDKNASVK--ALKEQ 924
Query: 541 TACCLKID-EGLLLAEVYNHQIFRFFENP---AELISSIKDD------------------ 578
A + D E L++AE+Y ++ ++ F+N AE S DD
Sbjct: 925 VAKKMGTDPERLVMAEIYKNKFYKMFDNTSSIAECQISGNDDIGIYEVESVPTNYNPDKP 984
Query: 579 ----------EHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+H D + ++ + I NR ++K ++ K ++R LFG P +
Sbjct: 985 QKSYFSFSRSDHEEIPSLDSPRSDRLLVPIFNRVEKKRGNN-PKNAQRSLFGVPSYVVIN 1043
Query: 629 EEHLSGADIDIAVSKLLS 646
E D D K+LS
Sbjct: 1044 REEF--GDYDTIFRKVLS 1059
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 122/188 (64%), Gaps = 21/188 (11%)
Query: 706 SSCKPIQKD-SILKPGKHIKVLLDWTDDVHELY------DPSYIKDLPV------VHKTG 752
S+ KP +D +++PG+ I ++DWT+ H+ D + ++ P V
Sbjct: 1210 SAPKPKAQDRPMIRPGEGI--VVDWTEQAHDALFAGSSRDKNSLRGAPTWTDVERVPDPE 1267
Query: 753 FTVKKT-----RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ ++T ++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+
Sbjct: 1268 LSKRRTLRQNRKKRGVTLYECLDEFNKEEVLSENDAWYCPRCKEHRRASKKFELWKTPDI 1327
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGG 866
LV HLKRFS SR ++KLD V+FP+ LD++ ++S ++G+S +YDLFA+ NHYGGLGG
Sbjct: 1328 LVMHLKRFSASRGFRDKLDVLVDFPVEGLDMTGRVESPEEGKSQIYDLFAVDNHYGGLGG 1387
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 1388 GHYTAYAK 1395
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 90 GPIDNSDII------QNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
GP+DNSDI+ G EG+ + +R LE G+D+ ++PQ W+ + WY +
Sbjct: 397 GPVDNSDIVLVTDPANTGFKDEEGEPFVPLRPGLELGEDFEIIPQGGWDLIMQWYGLAEQ 456
Query: 140 GPALPRKMISEGIVNEK 156
PA+ R + + V ++
Sbjct: 457 SPAIVRYVHNTAAVGDQ 473
>gi|225563465|gb|EEH11744.1| ubiquitin specific peptidase [Ajellomyces capsulatus G186AR]
Length = 1693
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L QYFL D Y ++N NPL G +A
Sbjct: 685 KDGRSPGVTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPGNPLSHDGNVAK 744
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 745 AYANLLHQLYDDNGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 804
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 805 QKKPYIEKPDSTDDMVGNNAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 864
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 865 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPIRVAVDIDKNASIKALKEYVGQRV 922
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + +
Sbjct: 923 GVPTNR-LVMAEIYKHKFYKMFENTSSI 949
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+C+EHR+A+KK +LW PD+LV HLK
Sbjct: 1336 LRQTRKKRGISLGECLDEFGKEEILSENDAWYCPRCREHRRASKKFELWKCPDILVMHLK 1395
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD+S ++ ++G+S Y+L A+ NHYGGLGGGHYTAY
Sbjct: 1396 RFSANRGFRDKIDALVDFP-LELDMSGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAY 1454
Query: 873 AK 874
AK
Sbjct: 1455 AK 1456
>gi|350634283|gb|EHA22645.1| hypothetical protein ASPNIDRAFT_175538 [Aspergillus niger ATCC
1015]
Length = 1574
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 199/378 (52%), Gaps = 53/378 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 586 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAK 645
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++LR+++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 646 AYANMLRQMYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 705
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 706 MKKPYIEKPDST---DEMVHNKEALAEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 762
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + +FY + P+ V + K+ K L
Sbjct: 763 CDKVSIIFDPFNNLTLQLP--IENLWGKEIFYFPLNKKPVLVDVEIDKNASVK--ALKEQ 818
Query: 541 TACCLKID-EGLLLAEVYNHQIFRFFEN-------------------------------P 568
A + D E L++AE+Y ++ ++ F+N P
Sbjct: 819 VAKKMGTDPERLVMAEIYKNKFYKMFDNTSSIAECQISGNDDIGIYEVESVPTNYNPDKP 878
Query: 569 AELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+ S +H D + ++ + I NR ++K ++ K ++R LFG P +
Sbjct: 879 QKSYFSFSRSDHEEIPSLDSPRSDRLLVPIFNRVEKKRGNN-PKNAQRSLFGVPSYVVIN 937
Query: 629 EEHLSGADIDIAVSKLLS 646
E D D K+LS
Sbjct: 938 REEF--GDYDTIFRKVLS 953
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 21/188 (11%)
Query: 706 SSCKPIQKD-SILKPGKHIKVLLDWTDDVHELY------DPSYIKDLPV------VHKTG 752
S+ KP +D +++PG+ I ++DWT+ H+ D + ++ P V
Sbjct: 1121 SASKPKAQDRPMIRPGEGI--VVDWTEQAHDALFAGSSRDKNSLRGAPTWTDVERVPDPE 1178
Query: 753 FTVKKT-----RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ ++T ++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+
Sbjct: 1179 LSKRRTLRQNRKKRGVTLYECLDEFNKEEVLSENDAWYCPRCKEHRRASKKFELWKTPDI 1238
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGG 866
LV HLKRFS SR ++KLD V+FP+ LD++ +++ ++G+S +YDLFA+ NHYGGLGG
Sbjct: 1239 LVMHLKRFSASRGFRDKLDVLVDFPVEGLDMTGRVEAPEEGKSQIYDLFAVDNHYGGLGG 1298
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 1299 GHYTAYAK 1306
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 90 GPIDNSDII------QNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
GP+DNSDI+ G EG+ + +R LE G+D+ ++PQ W+ + WY +
Sbjct: 291 GPVDNSDIVLVTDPANTGFKDEEGEPFVPLRPGLELGEDFEIIPQGGWDLIMQWYGLAEQ 350
Query: 140 GPALPRKMISEGIVNEK 156
PA+ R + + V ++
Sbjct: 351 SPAIVRYVHNTAAVGDQ 367
>gi|240276071|gb|EER39584.1| ubiquitin carboxyl-terminal hydrolase [Ajellomyces capsulatus H143]
Length = 1690
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L QYFL D Y ++N NPL G +A
Sbjct: 687 KDGRSLGVTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPGNPLSHDGNVAK 746
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 747 AYANLLHQLYDDNGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 806
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 807 QKKPYIEKPDSTDDMVGNNAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 866
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 867 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPIRVAVDIDKNASIKALKEYVGQRV 924
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + +
Sbjct: 925 GVPTNR-LVMAEIYKHKFYKMFENTSSI 951
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+C+EHR+A+KK +LW PD+LV HLK
Sbjct: 1338 LRQTRKKRGISLGECLDEFGKEEILSENDAWYCPRCREHRRASKKFELWKCPDILVMHLK 1397
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD+S + ++G+S Y+L A+ NHYGGLGGGHYTAY
Sbjct: 1398 RFSANRGFRDKIDALVDFP-LELDMSGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAY 1456
Query: 873 AK 874
AK
Sbjct: 1457 AK 1458
>gi|325093430|gb|EGC46740.1| ubiquitin carboxyl-terminal hydrolase [Ajellomyces capsulatus H88]
Length = 1690
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 166/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L QYFL D Y ++N NPL G +A
Sbjct: 687 KDGRSLGVTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPGNPLSHDGNVAK 746
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 747 AYANLLHQLYDDNGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 806
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 807 QKKPYIEKPDSTDDMVGNNAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 866
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 867 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPIRVAVDIDKNASIKALKEYVGQRV 924
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + +
Sbjct: 925 GVPTNR-LVMAEIYKHKFYKMFENTSSI 951
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+C+EHR+A+KK +LW PD+LV HLK
Sbjct: 1338 LRQTRKKRGISLGECLDEFGKEEILSENDAWYCPRCREHRRASKKFELWKCPDILVMHLK 1397
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD+S ++ ++G+S Y+L A+ NHYGGLGGGHYTAY
Sbjct: 1398 RFSANRGFRDKIDALVDFP-LELDMSGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAY 1456
Query: 873 AK 874
AK
Sbjct: 1457 AK 1458
>gi|134056184|emb|CAK96359.1| unnamed protein product [Aspergillus niger]
Length = 1661
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 201/378 (53%), Gaps = 53/378 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 690 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAK 749
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++LR+++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 750 AYANMLRQMYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 809
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 810 MKKPYIEKPDST---DEMVHNKEALAEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 866
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + +FY + P+ V + K+ K L
Sbjct: 867 CDKVSIIFDPFNNLTLQLP--IENLWGKEIFYFPLNKKPVLVDVEIDKNASVK--ALKEQ 922
Query: 541 TACCLKID-EGLLLAEVYNHQIFRFFENP---AELISSIKDD------------------ 578
A + D E L++AE+Y ++ ++ F+N AE S DD
Sbjct: 923 VAKKMGTDPERLVMAEIYKNKFYKMFDNTSSIAECQISGNDDIGIYEVESVPTNYNPDKP 982
Query: 579 ----------EHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+H D + ++ + I NR ++K ++ K ++R LFG P +
Sbjct: 983 QKSYFSFSRSDHEEIPSLDSPRSDRLLVPIFNRVEKKRGNN-PKNAQRSLFGVPSYVVIN 1041
Query: 629 EEHLSGADIDIAVSKLLS 646
E D D K+LS
Sbjct: 1042 REEF--GDYDTIFRKVLS 1057
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 21/188 (11%)
Query: 706 SSCKPIQKD-SILKPGKHIKVLLDWTDDVHELY------DPSYIKDLPV------VHKTG 752
S+ KP +D +++PG+ I ++DWT+ H+ D + ++ P V
Sbjct: 1208 SASKPKAQDRPMIRPGEGI--VVDWTEQAHDALFAGSSRDKNSLRGAPTWTDVERVPDPE 1265
Query: 753 FTVKKT-----RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ ++T ++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+
Sbjct: 1266 LSKRRTLRQNRKKRGVTLYECLDEFNKEEVLSENDAWYCPRCKEHRRASKKFELWKTPDI 1325
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGG 866
LV HLKRFS SR ++KLD V+FP+ LD++ +++ ++G+S +YDLFA+ NHYGGLGG
Sbjct: 1326 LVMHLKRFSASRGFRDKLDVLVDFPVEGLDMTGRVEAPEEGKSQIYDLFAVDNHYGGLGG 1385
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 1386 GHYTAYAK 1393
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 90 GPIDNSDII------QNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
GP+DNSDI+ G EG+ + +R LE G+D+ ++PQ W+ + WY +
Sbjct: 395 GPVDNSDIVLVTDPANTGFKDEEGEPFVPLRPGLELGEDFEIIPQGGWDLIMQWYGLAEQ 454
Query: 140 GPALPRKMISEGIVNEK 156
PA+ R + + V ++
Sbjct: 455 SPAIVRYVHNTAAVGDQ 471
>gi|317027427|ref|XP_001399282.2| ubiquitin carboxyl-terminal hydrolase [Aspergillus niger CBS 513.88]
Length = 1644
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 201/378 (53%), Gaps = 53/378 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 673 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAK 732
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++LR+++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 733 AYANMLRQMYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 792
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 793 MKKPYIEKPDST---DEMVHNKEALAEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 849
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + +FY + P+ V + K+ K L
Sbjct: 850 CDKVSIIFDPFNNLTLQLP--IENLWGKEIFYFPLNKKPVLVDVEIDKNASVK--ALKEQ 905
Query: 541 TACCLKID-EGLLLAEVYNHQIFRFFENP---AELISSIKDD------------------ 578
A + D E L++AE+Y ++ ++ F+N AE S DD
Sbjct: 906 VAKKMGTDPERLVMAEIYKNKFYKMFDNTSSIAECQISGNDDIGIYEVESVPTNYNPDKP 965
Query: 579 ----------EHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
+H D + ++ + I NR ++K ++ K ++R LFG P +
Sbjct: 966 QKSYFSFSRSDHEEIPSLDSPRSDRLLVPIFNRVEKKRGNN-PKNAQRSLFGVPSYVVIN 1024
Query: 629 EEHLSGADIDIAVSKLLS 646
E D D K+LS
Sbjct: 1025 REEF--GDYDTIFRKVLS 1040
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 21/188 (11%)
Query: 706 SSCKPIQKD-SILKPGKHIKVLLDWTDDVHELY------DPSYIKDLPV------VHKTG 752
S+ KP +D +++PG+ I ++DWT+ H+ D + ++ P V
Sbjct: 1191 SASKPKAQDRPMIRPGEGI--VVDWTEQAHDALFAGSSRDKNSLRGAPTWTDVERVPDPE 1248
Query: 753 FTVKKT-----RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ ++T ++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+
Sbjct: 1249 LSKRRTLRQNRKKRGVTLYECLDEFNKEEVLSENDAWYCPRCKEHRRASKKFELWKTPDI 1308
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGG 866
LV HLKRFS SR ++KLD V+FP+ LD++ +++ ++G+S +YDLFA+ NHYGGLGG
Sbjct: 1309 LVMHLKRFSASRGFRDKLDVLVDFPVEGLDMTGRVEAPEEGKSQIYDLFAVDNHYGGLGG 1368
Query: 867 GHYTAYAK 874
GHYTAYAK
Sbjct: 1369 GHYTAYAK 1376
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 90 GPIDNSDII------QNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KG 139
GP+DNSDI+ G EG+ + +R LE G+D+ ++PQ W+ + WY +
Sbjct: 378 GPVDNSDIVLVTDPANTGFKDEEGEPFVPLRPGLELGEDFEIIPQGGWDLIMQWYGLAEQ 437
Query: 140 GPALPRKMISEGIVNEK 156
PA+ R + + V ++
Sbjct: 438 SPAIVRYVHNTAAVGDQ 454
>gi|296811975|ref|XP_002846325.1| ubiquitin carboxyl-terminal hydrolase 12 [Arthroderma otae CBS
113480]
gi|238841581|gb|EEQ31243.1| ubiquitin carboxyl-terminal hydrolase 12 [Arthroderma otae CBS
113480]
Length = 1633
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 204/372 (54%), Gaps = 48/372 (12%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +GE+A
Sbjct: 613 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLLGEYKKDLNPNNPLSHNGEVAK 672
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL++++ + G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 673 AYANLLQQIFDAQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 732
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 733 QKKPYIEKPDST---DEMVHDKAALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPT 789
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P T + + F + P+ V + K+ K + +
Sbjct: 790 CDKVSIIFDPFNNLTLQIPIENTWSHKIMFFPLHKP--PVNVEVDIDKNSSIKTVKQYVG 847
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
+ D L++AE+Y ++ ++ F++ + I + + I Y
Sbjct: 848 QKMNVDPDR-LVMAEIYKNKFYKLFDHSQSIADHQIGEGDTIAMYELDSVPTSYNPDKPH 906
Query: 586 -----------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
FD +G ++ + I NR + + ++ ++R FG PL + +
Sbjct: 907 RFRFSSEEPTGFDSHKGDRMLVPIYNRSRFRRGFNH---NQRSFFGVPLYVVITRDE--A 961
Query: 635 ADIDIAVSKLLS 646
D D + ++LS
Sbjct: 962 YDYDAVLRRILS 973
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 13/173 (7%)
Query: 703 ERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA 762
E+ P ++ ++PG I +LDW++ E YD + V K +K ++
Sbjct: 1191 EKRKQKAPQRRLPYVRPGDVI--VLDWSE---ETYDAIF-----VTTKRQLRSRK-KKRG 1239
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+L CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS +R +
Sbjct: 1240 ITLDECLDEFGREEILSENDAWYCPRCKEHRRASKKFELWKSPDILVMHLKRFSANRIFR 1299
Query: 823 NKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V+FP L LD++ ++ +GES +YDL A+ NHYGGLGGGHYTAYA+
Sbjct: 1300 DKIDAVVDFP-LELDMTGRIQMPGEGESMIYDLIAVDNHYGGLGGGHYTAYAR 1351
Score = 39.7 bits (91), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 36/207 (17%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
DE+ V L QS D ++G +++S W + + + S P +
Sbjct: 274 DEQVAQVMQLMQQSPADKQKG---YIVSATWLKR-----------VLSRSSTLPRPDKAD 319
Query: 83 SKRAE-RPGPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFC 135
AE GP+DNSD++ + + +D + +R L+ G+DY ++P++ W +
Sbjct: 320 KLAAEGEIGPVDNSDLVLVTDPETIFNDEAGKPFVPMRPGLQMGEDYEILPEEAWNLVMK 379
Query: 136 WY---KGGPALPR---KMISEGIVNEKRVEVFXLCLKLIDSRDN------SQTVIR-LSK 182
WY K PA+ R +EG + + E+ ++ N SQ +R L+
Sbjct: 380 WYGLSKDSPAIVRYAHNTNTEGDMEHIQYELNPPIFSILKLSSNPTEAEKSQPPVRFLAS 439
Query: 183 KASTRQLYEKVCK-LRGIEQE-KARIW 207
+ + Q + K K L I+ K R+W
Sbjct: 440 RHTPFQQWLKTAKSLASIDMSTKTRVW 466
>gi|320035500|gb|EFW17441.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str.
Silveira]
Length = 1527
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 200/381 (52%), Gaps = 56/381 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L QYFL +Y ++N NPL +G++A
Sbjct: 502 KDGKTRGVTGLSNLGNTCYMNSALQCVRSVEELTQYFLANEYKKDLNPSNPLSHNGDVAR 561
Query: 371 AFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +LL +++ +++PR+FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 562 TYANLLHQMFDENAPDSISPRSFKLTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 621
Query: 430 KQKPYIEMKDSGG------RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPYIE DS +E A+ W+ +KARNDS+I D+F G YKST+VCP C K
Sbjct: 622 HKKPYIEKPDSTDDMVHDKAALQEFADRNWEIYKARNDSVITDLFAGMYKSTVVCPACDK 681
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + V++ G P+ V + K+ K AL
Sbjct: 682 VSIIFDPFSNLTLQLP--IENVWSKYVYFFPAHGEPLLIDVEIDKNASIK----ALKEYV 735
Query: 544 CLKIDEG---LLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
K++ L++AE+Y +I++ F N + + SI ++I Y
Sbjct: 736 AKKVNSDPRRLVMAEIYTQKIYKLFSNTSAISDCSIGQSDNIAMYELETIPTSYDPDKAK 795
Query: 586 --------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
FD +Q +I + I NR + S + Y + +R LFG P
Sbjct: 796 RQSYSMLYTGLRGEDADIVSFDSEQADRILVPIFNRVVKTSVTKYAR--QRPLFGVPRFA 853
Query: 626 YLEEEHLSGADIDIAVSKLLS 646
+ E D D + K+L+
Sbjct: 854 VITREE--AMDYDAILRKVLA 872
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 106/177 (59%), Gaps = 23/177 (12%)
Query: 717 LKPGKHIKVLLDWTDDVHELY------------------DPSYIKDLPVVHKTGFTVKKT 758
++PG+ I +LDWT+ H+ +P + D + K K
Sbjct: 1104 IRPGEAI--VLDWTESAHDALFGGDPRDKESLRGIPTWENPQRLPDPELARKRQLRQSKK 1161
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW +PD+LV HLKRFS +
Sbjct: 1162 RM-GISLAECLDEFGREEILSENDAWYCPRCKEHRRASKKFELWTVPDILVMHLKRFSAN 1220
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP L LD+S + DG+S +YDL A+ NHYG LGGGHYTAYAK
Sbjct: 1221 RGFRDKLDVLVDFP-LELDMSGRAQAPNDGKSMMYDLIAVDNHYGTLGGGHYTAYAK 1276
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S+ D + +R L+ G+D+ + PQ+ W+ + WY K
Sbjct: 207 GPVDNSDLVLVTDPSTLFKDEAGEPFVPLRPGLQMGEDFEIFPQEAWDLIISWYGLSKNS 266
Query: 141 PALPRKM-------ISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRLSKKAS 185
PA+ R +E I E VF + LKL S D S+T ++ +
Sbjct: 267 PAIVRYAHNTNTPGNTENIQYELNPPVFTI-LKLPSPTNPAVQLSTDKSRTPVKTLASSH 325
Query: 186 T--RQLYEKVCKLRGIE-QEKARIW 207
T +Q KL I+ K R+W
Sbjct: 326 TPFQQWLRNAKKLASIQPTTKVRVW 350
>gi|301604786|ref|XP_002932037.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Xenopus
(Silurana) tropicalis]
Length = 1220
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 190/630 (30%), Positives = 281/630 (44%), Gaps = 114/630 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPL----GMH--GELALA 371
GL+GL+N GNTCFMN+ LQCL +T DL FLG + E+PL G H GE+
Sbjct: 67 GLSGLKNHGNTCFMNAVLQCLSNT-DLFAEFLGLEQYKEAPESPLASPGGTHDRGEVTEQ 125
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV-- 429
LLR LW+ R FK ++R A Q+ G +QHD+QE L +LLD +HEDLN V
Sbjct: 126 LAKLLRSLWTLEYTPQHSREFKAIVSRNALQYRGTSQHDAQEFLLWLLDRVHEDLNVVVK 185
Query: 430 -KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
K +P +E +G P + + + ++FQ QY+S+L CP C K S TF
Sbjct: 186 HKPRPPLEEDLTGEGPTFPSSG-----------TFVQELFQAQYRSSLTCPHCQKQSNTF 234
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF+ ++LP+P TR + VTV Y M V + G L A+S + D
Sbjct: 235 DPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVGIPLSGNVGRLREAISQETKIPFD 294
Query: 549 EGLLLAEVYNHQIFR-FFEN---------------------PAELISS-----IKDDEHI 581
+ +++ E+Y R FF+ P+E I S + ++++
Sbjct: 295 Q-IVITEMYFDGFHRSFFDTDDLDTIHESDCLFAFETPETFPSEGILSQRAICVNNNQNY 353
Query: 582 VAYRFDRKQ---GGKIKLEIVNRWQEKSASDYL---------KGSERKLFGAPLVTYLEE 629
V + D+ + G ++ VNR S SD + G K FG P V +LE
Sbjct: 354 VRHGTDQHRLYSSGSVR-NPVNRC---STSDRIVLLVCNRAYSGQHGKRFGQPFVLHLER 409
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDL 689
DI ++L + + P ++ V + L
Sbjct: 410 ----NITWDILQKEILEKM-------------QYYLRPTACVQVCPFSLRVVTAVGITYL 452
Query: 690 CSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVHE-LYDPSYIKDLPV 747
+E T ER + SC P H+K++++W + E L+ + + +P
Sbjct: 453 LPQEEKPLCHPTVERALKSCGPGG-------AAHVKLVVEWDRETKEYLFGSTEEEYVPD 505
Query: 748 VHKTGFTVKKTRQ-EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
+ Q + +L C + EE L P + W CP CK+ +Q + KL LW LPD
Sbjct: 506 AESVRLQREIHHQPQCCTLAQCFHLYTKEEQLAPGNAWRCPHCKQLQQGSIKLSLWTLPD 565
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS----------------------KYMKS 844
VL+ HLKRF + KL V FP+ LD++ Y
Sbjct: 566 VLILHLKRFRQDGDRRLKLQNMVRFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYSLG 625
Query: 845 KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+D E ++YDL+A+ NH+G + GGHYTAY K
Sbjct: 626 RDPEDFIYDLYAVCNHHGTMQGGHYTAYCK 655
>gi|303315325|ref|XP_003067670.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107340|gb|EER25525.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1527
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 200/381 (52%), Gaps = 56/381 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L QYFL +Y ++N NPL +G++A
Sbjct: 502 KDGKTRGVTGLSNLGNTCYMNSALQCVRSVEELTQYFLANEYKKDLNPSNPLSHNGDVAR 561
Query: 371 AFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +LL +++ +++PR+FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 562 TYANLLHQMFDENAPDSISPRSFKLTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 621
Query: 430 KQKPYIEMKDSGG------RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPYIE DS +E A+ W+ +KARNDS+I D+F G YKST+VCP C K
Sbjct: 622 HKKPYIEKPDSTDDMVHDKAALQEFADRNWEIYKARNDSVITDLFAGMYKSTVVCPACDK 681
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + V++ G P+ V + K+ K AL
Sbjct: 682 VSIIFDPFSNLTLQLP--IENVWSKYVYFFPAHGEPLLIDVEIDKNASIK----ALKEYV 735
Query: 544 CLKIDEG---LLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
K++ L++AE+Y +I++ F N + + SI ++I Y
Sbjct: 736 AKKVNSDPRRLVMAEIYTQKIYKLFSNTSAISDCSIGQSDNIAMYELETIPTSYDPDKAK 795
Query: 586 --------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
FD +Q +I + I NR + S + Y + +R LFG P
Sbjct: 796 RQSYSMLYTGLRGDDADIVSFDSEQADRILVPIFNRVVKTSVTKYAR--QRPLFGVPRFA 853
Query: 626 YLEEEHLSGADIDIAVSKLLS 646
+ E D D + K+L+
Sbjct: 854 VITREE--AMDYDAILRKVLA 872
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 106/177 (59%), Gaps = 23/177 (12%)
Query: 717 LKPGKHIKVLLDWTDDVHELY------------------DPSYIKDLPVVHKTGFTVKKT 758
++PG+ I +LDWT+ H+ +P + D + K K
Sbjct: 1104 IRPGEAI--VLDWTESAHDALFGGDPRDKESLRGIPTWENPQRLPDPELARKRQLRQSKK 1161
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW +PD+LV HLKRFS +
Sbjct: 1162 RM-GISLAECLDEFGREEILSENDAWYCPRCKEHRRASKKFELWTVPDILVMHLKRFSAN 1220
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP L LD+S + DG+S +YDL A+ NHYG LGGGHYTAYAK
Sbjct: 1221 RGFRDKLDVLVDFP-LELDMSGRAQAPNDGKSMMYDLIAVDNHYGTLGGGHYTAYAK 1276
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S+ D + +R L+ G+D+ + PQ+ W+ + WY K
Sbjct: 207 GPVDNSDLVLVTDPSTLFKDEAGEPFVPLRPGLQMGEDFEIFPQEAWDLIISWYGLSKNS 266
Query: 141 PALPRKM-------ISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRLSKKAS 185
PA+ R +E I E VF + LKL S D S+T ++ +
Sbjct: 267 PAIVRYAHNTNTPGNTENIQYELNPPVFTI-LKLPSPTNPAVQLSTDKSRTPVKTLASSH 325
Query: 186 T--RQLYEKVCKLRGIE-QEKARIW 207
T +Q KL I+ K R+W
Sbjct: 326 TPFQQWLRNAKKLASIQPTTKVRVW 350
>gi|320582331|gb|EFW96548.1| Ubiquitin carboxyl-terminal hydrolase [Ogataea parapolymorpha DL-1]
Length = 1127
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 267/578 (46%), Gaps = 139/578 (24%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP 91
L QS DL+EG Y+ I W N+ P + A GP
Sbjct: 34 LVEQSFFDLREGTKYYGIPKEWL---------------NVFLRGP------PQEAAALGP 72
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRKMISE 150
I+ S I+ D E+ N ++V +QV+ KL WY GP + R++ +
Sbjct: 73 INTSSIL---------DHTELCINPATNPEFVA--EQVFAKLVEWYGVDGPFVERQLFMD 121
Query: 151 GIVNEKRVEVFXLCLKLIDSRDNSQTVIR----------LSKKASTRQLYEKVCKLRGIE 200
+ ++E + L + +N +T+ R +S ++ R L V K I
Sbjct: 122 KKDGQLKLETYPLYIIPHLLCNNPETINRYRLAGAKPFLISALSTARDLKLAVKKQFEIG 181
Query: 201 QEKARIWDYFNKQR---STSPLDVSDQT---------------LDDAMLQMDQDILLEVQ 242
+ RIW R +P D+S+ T L+D + +++IL+E+Q
Sbjct: 182 KGTTRIWRITPATRLPVILTPQDLSNITSKTLIPAGKKSGSIRLEDLNIS-ERNILIEIQ 240
Query: 243 VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMD 302
++G P +S T+ G
Sbjct: 241 QEDGTY--------------PMDTSSTVTLG----------------------------- 257
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD-EINTENP 361
GL GL NLGNTC+MNSALQCLVH P+L YFL DY + EIN +NP
Sbjct: 258 --------------SGLVGLNNLGNTCYMNSALQCLVHIPELTNYFLYDYYEKEINRDNP 303
Query: 362 LGMHGELALAFGDLLRKLW----SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
LG G++A A+ L++ L+ + ++ +PR FK + + F+ Y+Q DSQEL+AF
Sbjct: 304 LGNDGKVASAYAGLVKHLFDKRFAGPSSSFSPRDFKYTIGYYNSMFADYHQQDSQELIAF 363
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVF 468
LLDGLHEDLNR+ +KPY+E + PD++V A +CW +HK RN+S+++D+F
Sbjct: 364 LLDGLHEDLNRILKKPYVEKPE---LPDDKVNDLEEVRKLAQKCWDSHKLRNNSVVIDLF 420
Query: 469 QGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMK 528
G YKSTLVCP C K+SITFDP+ LTLPLP V V G P V L K
Sbjct: 421 VGLYKSTLVCPSCGKISITFDPYNDLTLPLPVHKKWIGKVNVLLE--EGYPKSLEVELPK 478
Query: 529 HGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE 566
DL + ++ + I+E LL EV+ Q+++ FE
Sbjct: 479 SATFADLKVYVADKVKVPINE-LLAVEVFQSQVYKNFE 515
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 90/120 (75%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+ ++R++ ISL +C++ F E LG +D+WYCP CKEHRQATKK+++W +PD+L HLKR
Sbjct: 827 MAESRRKNISLDNCMEMFSNPEVLGENDLWYCPNCKEHRQATKKIEIWSVPDILTIHLKR 886
Query: 815 FSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
F ++ +K+D V FPI LD+SKY+ GE +YDLFA+ NH+GGLGGGHYTAYAK
Sbjct: 887 FENTKSFSDKIDAVVEFPIEGLDMSKYVVDSTGEEMIYDLFAVDNHFGGLGGGHYTAYAK 946
>gi|295673879|ref|XP_002797485.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
gi|226280135|gb|EEH35701.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1516
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 266/585 (45%), Gaps = 122/585 (20%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S D + +R L+ G+D+ ++P+ WE + WY +
Sbjct: 215 GPVDNSDLVLVTDPSLSYKDEAGELFVPLRPGLQIGEDFEVLPEDAWEMIMKWYGLSRDS 274
Query: 141 PALPR------KMISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRL--SKKA 184
PA+ R +E + E +F + LKL + ++D ++ ++ S+
Sbjct: 275 PAIVRFAHDTATGTTENVQYELNPPIFTI-LKLPNPSQSQAQIAQDKARAPVKTLASRHT 333
Query: 185 STRQLYEKVCKLRGIEQE-KARIWDYFN--------------KQRSTSP----------- 218
+Q V L IE K R+W RSTSP
Sbjct: 334 PFQQWLRNVKSLASIEMSTKVRVWRILEGLNSTATSGIITPAASRSTSPAPGATLTANAG 393
Query: 219 ---------------------LDVSDQT----------LDDAMLQMDQDILLEVQVDN-- 245
L++ DQT L A L D I+LE QV
Sbjct: 394 NSLVLDVNKFVALVEGSQRELLEMKDQTANLKYNGSLTLHLAGLGGDDVIVLEEQVGGPG 453
Query: 246 -----GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
N L++ I+ + A PA S G +
Sbjct: 454 GGEWVADCAGKNANHLSVTAIKAGSQNKAKAKAPATS-------------GRASSPAVGP 500
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
+ G K G G+ GL NLGN+C+MNSALQC+ +L QYFL D Y ++N
Sbjct: 501 VTRG----RQRKDGRSRGVTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPG 556
Query: 360 NPLGMHGELALAFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPL G +A A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FL
Sbjct: 557 NPLSHDGNVAKAYANLLHQLFDENGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFL 616
Query: 419 LDGLHEDLNRVKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
LDGL EDLNR+++KPYIE DS ++ A++CW +KARNDS+I D+F G Y
Sbjct: 617 LDGLQEDLNRIQKKPYIEKPDSTDDMVNDNAALQQFASKCWDIYKARNDSVITDLFAGMY 676
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KST+VCPVC KVSI FDPF LTL LP + + +F+ P+ V + K+
Sbjct: 677 KSTVVCPVCDKVSIIFDPFSNLTLQLP--IENLWSKELFFFPLYSRPVRLDVDIDKNSSV 734
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKD 577
K L + + L++AE+Y + ++ F+N SSI D
Sbjct: 735 KALKEYVGEKVNVDTSR-LVMAEIYKQKFYKMFDN----TSSIAD 774
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ +SL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS +
Sbjct: 1163 KKRGVSLDECLDEFGKEEILSENDAWYCPRCKEHRRASKKFELWKCPDILVMHLKRFSAN 1222
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K+D V+FP LD++ + ++G+S Y+L A+ NHYGGLGGGHYTA+AK
Sbjct: 1223 RGFRDKIDALVDFP-HELDMTGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAFAK 1278
>gi|255716176|ref|XP_002554369.1| KLTH0F03674p [Lachancea thermotolerans]
gi|238935752|emb|CAR23932.1| KLTH0F03674p [Lachancea thermotolerans CBS 6340]
Length = 1198
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 281/596 (47%), Gaps = 106/596 (17%)
Query: 11 MENGGSCLPCTPD--EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRS-WERYVCGDEPS 67
M GG+ + P E+RQI+ ++ Q+ + +EG+ ++I + WY + W+
Sbjct: 61 MAEGGAKVDAIPSLVEQRQILSEIYTQAQAESREGDAVYVIPSLWYNNFWDA-------- 112
Query: 68 IDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQ 127
NI+ S R GPID + I + + D Y+ VP+
Sbjct: 113 --NITEKS------------RIGPIDTTSICNDFDNFLLAD--------YNAHPYLSVPE 150
Query: 128 QVWEKLFCWYKGGPALPRKMISEGIVNEKR----VEVFXLCLKLIDSRDNSQTVIRLS-- 181
V++KL WY G + P + ++ ++ E C ++ +D+ + R S
Sbjct: 151 TVFKKLSEWY--GLSDPSNPVKTVLIKDEDGQLVTEYNRCCFRVHFLKDSVEKYNRFSGG 208
Query: 182 ---------KKASTRQLYEKVCKLRGIEQEKA--------RIWDYFNKQRSTSPLDVSDQ 224
+ S+ ++ + C + EQEK RIW +T ++ Q
Sbjct: 209 VRAPLFFTMSRLSSIEMVVQRCLQKFGEQEKLFDLKTHRFRIWQVQEPTSTTKSSFLATQ 268
Query: 225 TLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGY 284
+ D + + I +Q +L L I+ L + + H
Sbjct: 269 YVLDPLTFAEMPIKTRLQ---SKMFGCLIKNLKLPVID-----LVVELKDVTTGDH---- 316
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
+P + F YN K G GL NLGN+C+MNSALQCLVH P+L
Sbjct: 317 ----WPSNHF------------YYN--KLLPPRGTTGLSNLGNSCYMNSALQCLVHIPEL 358
Query: 345 AQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW---SSGRAAVAPRAFKGKLARFA 400
YFL G Y +++NT+NPLG G +A AF L++ L+ SS A +PR FK + +
Sbjct: 359 KDYFLYGGYEEDVNTQNPLGYKGLVAQAFAALIKSLFDERSSSAFAFSPREFKSIIGQQN 418
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---------ANE 451
F+G+ Q DSQE LAFLLDGLHEDLNR+ +KP++E + PDE+V A++
Sbjct: 419 SMFAGFLQQDSQEFLAFLLDGLHEDLNRIIEKPFVEKPELS--PDEDVNNREVIHRLASK 476
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W HK RNDS+I+D+F G YKSTL CPVC K S+TFDP+ LTLPLP T V +F
Sbjct: 477 TWDKHKLRNDSVILDLFVGLYKSTLTCPVCDKTSVTFDPYSDLTLPLPVESIWTSKVRIF 536
Query: 512 YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
N S P V L K +DL ++ + D+ L+ AE++NH + +E+
Sbjct: 537 -PNFSP-PCILEVELPKGSTYQDLKNYVAEVANMNADD-LIGAEIFNHAFYNNYES 589
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 80/125 (64%), Gaps = 5/125 (4%)
Query: 755 VKKTRQEA----ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
K+ RQ ISLF CL F E L D WYCP C+EHRQATK++ LW PD+L
Sbjct: 891 AKRQRQHEGERRISLFDCLKLFSKPEVLSAADSWYCPTCREHRQATKQIQLWNSPDILTI 950
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHY 869
HLKRF +K+ V+FPI L++S ++ +D E + +YDL A+ NHYGGLGGGHY
Sbjct: 951 HLKRFESRHSFSDKISDVVDFPICGLNMSDHLVCEDAEQNNLYDLVAVDNHYGGLGGGHY 1010
Query: 870 TAYAK 874
TA+AK
Sbjct: 1011 TAFAK 1015
>gi|119481685|ref|XP_001260871.1| ubiquitin carboxyl-terminal hydrolase, putative [Neosartorya fischeri
NRRL 181]
gi|119409025|gb|EAW18974.1| ubiquitin carboxyl-terminal hydrolase, putative [Neosartorya fischeri
NRRL 181]
Length = 1658
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 196/367 (53%), Gaps = 49/367 (13%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 651 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKRDLNPSNPLAHNGDIAK 710
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR L+ +G+++ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 711 AYANLLRMLYDEAGQSSFAPRQFKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 770
Query: 430 KQKPYIEMKDSGG------RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW +KARNDS+I D+F G YKSTLVCPVC K
Sbjct: 771 QKKPYIEKPDSTDDMVHDKEALKEFANKCWDIYKARNDSVITDLFAGMYKSTLVCPVCEK 830
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K AL
Sbjct: 831 VSIIFDPFNNLTLQLP--IENLWSKEIFFFPLHRKPVIVDVEIDKNASIK----ALKELV 884
Query: 544 CLKID---EGLLLAEVYNHQIFRFFENPAELI-------------------SSIKDDEHI 581
K+ + L++AE+Y + ++ F+N A + ++ D+
Sbjct: 885 AKKMGSDPQRLVMAEIYKCKFYKMFDNSASIADCQIGQGDDIAIFEVESVPTNYNPDKRQ 944
Query: 582 VAY------------RFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
+Y FD + ++ + I NR + S+ +R LFGAPL +
Sbjct: 945 KSYFSYGRSDYEEIPSFDSPKADRMLVPIFNR-HCRPKSNNSGNMQRSLFGAPLYVIISR 1003
Query: 630 EHLSGAD 636
E D
Sbjct: 1004 EEAQNYD 1010
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 111/177 (62%), Gaps = 20/177 (11%)
Query: 716 ILKPGKHIKVLLDWTDDVHELYDPSYIKDL-----------------PVVHKTGFTVKKT 758
+++PG+ I +LDW D H+ KD P + K +
Sbjct: 1207 LIRPGEGI--VLDWNDQAHDALFGGDKKDTDGLRGSPTWTNVERIPDPELAKRRDLRRSR 1264
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS S
Sbjct: 1265 KKRGVTLYECLDEFNKEEILSENDAWYCPRCKEHRRASKKFELWKTPDILVMHLKRFSAS 1324
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP+ LD+S ++S ++G+S +YDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1325 RGFRDKLDVLVDFPVEGLDMSGRVESPEEGKSLIYDLFAVDNHYGGLGGGHYTAYAK 1381
>gi|238878907|gb|EEQ42545.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1362
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 196/344 (56%), Gaps = 26/344 (7%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
++Y +G GG GL N+GNTC+MNSALQCL+H P++ YF + Y E+N +NPLG
Sbjct: 315 NAYEEVSQG--GGHLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGY 372
Query: 365 HGELALAFGDLLRKLWS--SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
HG++A AFG LL++ + ++++PR FK + R++ FSGY Q DSQELL++LLD L
Sbjct: 373 HGDVANAFGSLLKQAFDHVKNSSSISPREFKSTIGRYSSMFSGYLQQDSQELLSWLLDAL 432
Query: 423 HEDLNRVKQKPYIE---MKDS---GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR+ QKPY E +KD + ++AN CW HKARNDS+I+D+F G Y+STL
Sbjct: 433 HEDLNRIHQKPYCEKPELKDDEIDDPQAITKLANTCWNQHKARNDSVIIDLFTGLYQSTL 492
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG-LP---MPFTVTLMKHGCC 532
+CP C K SITFDPF LTLPLP + T T+ + G +P M V L K
Sbjct: 493 ICPDCGKKSITFDPFNDLTLPLPISKKWYHTFTIVDLSNQGVIPERIMKLEVELNKTSNF 552
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYRF 586
DL+ LS + E L E++ + I+ F+ N IS I+D + ++ Y
Sbjct: 553 DDLLSYLSNFLNVPSTE-LFAYEIFQNAIYSDFQLDYTKNKFLPISDIIRDTDDVIVYIV 611
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
I + + N ++ +S + FG PL + +E
Sbjct: 612 PHNPAVDIIVPVFNAVEDADSSYQMVN----FFGIPLFVVMNKE 651
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 711 IQKDSILKPGKHIKVLLDWTDDVH-------ELYDPSYIKDLP--VVHKTGFTVKKTRQE 761
I KD++L L DW +++ EL I +LP + K ++ R+
Sbjct: 959 ISKDTVL--------LCDWDKEIYQKCFGDKELQAWENISNLPNPELEKNRAHFERQRKA 1010
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CL +F T E LG D+WYCP+C EH++ATK + LW D+L HLKRF +R
Sbjct: 1011 KITLSDCLKSFSTPEILGEHDLWYCPRCTEHKRATKTIQLWSTGDILTIHLKRFHSARAF 1070
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V+FPI LD+S Y+ + D E +YDL A+ NHYGGLGGGHYTA K
Sbjct: 1071 SDKIDVLVDFPIEGLDISSYVANTDLTPEDCLYDLIAVDNHYGGLGGGHYTASVK 1125
>gi|410895963|ref|XP_003961469.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Takifugu
rubripes]
Length = 1304
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 182/655 (27%), Positives = 281/655 (42%), Gaps = 139/655 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF------LGDYSDEINTENPLGM------- 364
G+AGL+N GNTCFMN+ LQCL +T A+Y +GD +D + G
Sbjct: 86 GVAGLKNHGNTCFMNAILQCLSNTELFAEYLALEQFRVGDTADTNDKAKSSGAPVQKKAG 145
Query: 365 -----HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
GE+ L+R LW+ R FK +++ A QF G +QHD+QE L +LL
Sbjct: 146 QQPQEAGEVTEQLSGLVRALWTFEYTPQHSRDFKNMVSKSAIQFKGNSQHDAQEFLLWLL 205
Query: 420 DGLHEDLNRV------KQKPYIEMKDSG-GRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
D +HEDLN + QKP +E +++ G P S + ++FQ QY
Sbjct: 206 DRVHEDLNHIVHPDIRPQKPPVEEQNAPEGSPLPAPG------------SFVQELFQAQY 253
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN--------GSGLPMPFTV 524
+S+L CP C K S TFDPF+ ++LP+P TR + VTV Y G +P+ T+
Sbjct: 254 RSSLTCPHCQKQSNTFDPFLCISLPIPVPHTRPLYVTVVYQGKCSNCMRVGVAVPLSGTM 313
Query: 525 TLMKHGCCKDLILALSTACCLKI------------DEGLLLAEVYNHQIFRF----FENP 568
+ ++ ++ + ++ DE L + + + IF F P
Sbjct: 314 SRLRKAVAQETKIPAQQIVLTEMYYDGFHRSFCDDDEDLDVIQESD-SIFAFETPELFRP 372
Query: 569 AELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSA--------------------S 608
++ S H + + K G + I + QE ++ +
Sbjct: 373 EQIRSKRCGSPHANLNQNNLKYTGTDNIRISTQIQEPTSPPQSPNKNSGQAEKIVLLVCN 432
Query: 609 DYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPE 668
G + + FG P + YLE D+ ++L +R P
Sbjct: 433 RACAGQQGRRFGNPFILYLERT----VTWDVLQKEILEKMRHL-------------LRPG 475
Query: 669 VIDELSNSHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLL 727
V ++ V + L +E + ER SC P H+K+++
Sbjct: 476 VFVQVGPFTLRVVGVVGITYLLPQEEQPLCHPSVERAFKSCGPGGPP-------HVKIVV 528
Query: 728 DW----TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQE--AISLFSCLDAFLTEEPLGPD 781
+W D + + + YI D V VK+ Q+ SL C + EE L PD
Sbjct: 529 EWDKETKDYLFKRTEDEYIPDAESVRH----VKEQHQQPQTCSLAQCFQLYTKEEQLAPD 584
Query: 782 DMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKY 841
D W CP CK+ +Q + KL LW LPD+L+ HLKRF + K+ V FP++ +D++ +
Sbjct: 585 DAWRCPHCKQLQQGSIKLSLWTLPDILILHLKRFRQDGDRRMKIQNMVKFPLIGMDMAPH 644
Query: 842 M----------------------KSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
M S+D E Y+YDL+A+ NH+G + GGHYTA+ K
Sbjct: 645 MVKRSQSSWSLPSHWSPWRRPYGMSRDPEDYLYDLYAVCNHHGTMQGGHYTAHCK 699
>gi|391344334|ref|XP_003746456.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Metaseiulus occidentalis]
Length = 889
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 184/620 (29%), Positives = 287/620 (46%), Gaps = 85/620 (13%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-------YSDEINTENPLGMHGELAL 370
GL G++N GNTC++NS +QCL +T A+YF+ + YS + N + G GE+
Sbjct: 146 GLIGMKNHGNTCYLNSIVQCLSNTDTFAEYFVLNRYQVDLLYSKKSNRKK-YGTKGEVTE 204
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
L++ LWSS FK + ++ PQ+ G QHD+QE L +LLD +HEDLNR
Sbjct: 205 QLALLIKSLWSSTMYPDISAKFKTLVGKYGPQYQGSEQHDAQEFLIWLLDKVHEDLNRAN 264
Query: 431 QKPYIEMKDSG--GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+ Y ++ G G+PDE +A ++H N S + +FQGQ+K TL CP+C K TF
Sbjct: 265 KTKYKKLDSKGTFGKPDEFLAKRALESHVRCNVSFVQRLFQGQFKLTLTCPLCRKECKTF 324
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DP++ L+LP+P + + + V + G + F V L +DL +S C +
Sbjct: 325 DPYVCLSLPIPQKLKKLVPVHLVGLTGENRQIEFAVELFDDSTIRDLREKVSEKCRIPPK 384
Query: 549 EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIK----LEIVNRWQE 604
L L + + + S D + I + D K G K LE +
Sbjct: 385 HLLFLQMLPDTE--------GGFGSVYADTDSINSLLEDLKTRGNSKFVTCLETPKPKKT 436
Query: 605 KSASDYL------KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAH 658
+++ + LFG P V + + + D+ + + +S L + +
Sbjct: 437 NEHGEHIMIIWHNRTPVEGLFGEPYVIQVRRD-IGFKDLRLLMLDTMSDL-FCEEANEVD 494
Query: 659 GGKENGFLPEVIDELSNSHNESVETAE-LEDLCSRELSFQLSL-TD--ERISSCKPIQKD 714
G E +PE S + S+ A+ L + S L L TD E I++ +Q
Sbjct: 495 GFNERPIVPEF-----PSQSFSILCADMLPERNEIRASDDLPLYTDPVEHITAVSKVQYP 549
Query: 715 SILKPGKHIKVLLDWTDDV---HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDA 771
SI KH+++L++W D++ L P ++D + + T + L CL+A
Sbjct: 550 SI---AKHLRLLVEWRDELIVSKVLEPPGPLRDESLGGLDELDGETT--VPVDLNDCLNA 604
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNF 831
+ +EE L ++ W CP C+ +Q KLDLW PD+LV HLKRF ++K+ V+F
Sbjct: 605 YFSEELLEAEEAWLCPTCERRQQVLSKLDLWTSPDILVIHLKRFKQVNQERSKIYFLVDF 664
Query: 832 PILNLDLSKYMKSKDGES-------------------------------------YVYDL 854
P LDLS++ + GES VYDL
Sbjct: 665 PTSGLDLSRFTAQR-GESPDLSREREKDTVSTWSPWNNSSQRSPLRNVDPRNPNNLVYDL 723
Query: 855 FAISNHYGGLGGGHYTAYAK 874
+A+ NH+G + GGHYTA+ K
Sbjct: 724 YAVCNHHGTMQGGHYTAFCK 743
>gi|68474445|ref|XP_718762.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440549|gb|EAK99854.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1354
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 196/344 (56%), Gaps = 26/344 (7%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
++Y +G GG GL N+GNTC+MNSALQCL+H P++ YF + Y E+N +NPLG
Sbjct: 315 NAYEEVSQG--GGHLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGY 372
Query: 365 HGELALAFGDLLRKLWS--SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
HG++A AFG LL++ + ++++PR FK + R++ FSGY Q DSQELL++LLD L
Sbjct: 373 HGDVANAFGSLLKQAFDHVKNSSSISPREFKSTIGRYSSMFSGYLQQDSQELLSWLLDAL 432
Query: 423 HEDLNRVKQKPYIE---MKDS---GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR+ QKPY E +KD + ++AN CW HKARNDS+I+D+F G Y+STL
Sbjct: 433 HEDLNRIHQKPYCEKPELKDDEIDDPQAITKLANTCWNQHKARNDSVIIDLFTGLYQSTL 492
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG-LP---MPFTVTLMKHGCC 532
+CP C K SITFDPF LTLPLP + T T+ + G +P M V L K
Sbjct: 493 ICPDCGKKSITFDPFNDLTLPLPISKKWYHTFTIVDLSNQGVIPERIMKLEVELNKTSNF 552
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYRF 586
DL+ LS + E L E++ + I+ F+ N IS I+D + ++ Y
Sbjct: 553 DDLLSYLSNFLNVPSTE-LFAYEIFQNAIYSDFQLDYTKNKFLPISDIIRDTDDVIVYIV 611
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
I + + N ++ +S + FG PL + +E
Sbjct: 612 PHNPAVDIIVPVFNAVEDADSSYQMVN----FFGIPLFVVMNKE 651
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 711 IQKDSILKPGKHIKVLLDWTDDVH-------ELYDPSYIKDLP--VVHKTGFTVKKTRQE 761
I KD++L L DW +++ EL I +LP + K ++ R+
Sbjct: 959 ISKDTVL--------LCDWDKEIYQKCFGDKELQAWENISNLPNPELEKNRAHFERQRKA 1010
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CL +F T E LG D+WYCP+C EH++ATK + LW D+L HLKRF +R
Sbjct: 1011 KITLSDCLKSFSTPEILGEHDLWYCPRCTEHKRATKTIQLWSTGDILTIHLKRFHSARAF 1070
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V+FPI LD+S Y+ + D E +YDL A+ NHYGGLGGGHYTA K
Sbjct: 1071 SDKIDVLVDFPIEGLDISSYVANTDLTPEDCLYDLIAVDNHYGGLGGGHYTASVK 1125
>gi|68474276|ref|XP_718847.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440639|gb|EAK99943.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1372
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 196/344 (56%), Gaps = 26/344 (7%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
++Y +G GG GL N+GNTC+MNSALQCL+H P++ YF + Y E+N +NPLG
Sbjct: 315 NAYEEVSQG--GGHLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGY 372
Query: 365 HGELALAFGDLLRKLWS--SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
HG++A AFG LL++ + ++++PR FK + R++ FSGY Q DSQELL++LLD L
Sbjct: 373 HGDVANAFGSLLKQAFDHVKNSSSISPREFKSTIGRYSSMFSGYLQQDSQELLSWLLDAL 432
Query: 423 HEDLNRVKQKPYIE---MKDS---GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR+ QKPY E +KD + ++AN CW HKARNDS+I+D+F G Y+STL
Sbjct: 433 HEDLNRIHQKPYCEKPELKDDEIDDPQAITKLANTCWNQHKARNDSVIIDLFTGLYQSTL 492
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG-LP---MPFTVTLMKHGCC 532
+CP C K SITFDPF LTLPLP + T T+ + G +P M V L K
Sbjct: 493 ICPDCGKKSITFDPFNDLTLPLPISKKWYHTFTIVDLSNQGVIPERIMKLEVELNKTSNF 552
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYRF 586
DL+ LS + E L E++ + I+ F+ N IS I+D + ++ Y
Sbjct: 553 DDLLSYLSNFLNVPSTE-LFAYEIFQNAIYSDFQLDYTKNKFLPISDIIRDTDDVIVYIV 611
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
I + + N ++ +S + FG PL + +E
Sbjct: 612 PHNPAVDIIVPVFNAVEDADSSYQMVN----FFGIPLFVVMNKE 651
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 711 IQKDSILKPGKHIKVLLDWTDDVH-------ELYDPSYIKDLP--VVHKTGFTVKKTRQE 761
I KD++L L DW +++ EL I +LP + K ++ R+
Sbjct: 959 ISKDTVL--------LCDWDKEIYQKCFGDKELQAWENISNLPNPELEKNRAHFERQRKA 1010
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CL +F T E LG D+WYCP+C EH++ATK + LW D+L HLKRF +R
Sbjct: 1011 KITLSDCLKSFSTPEILGEHDLWYCPRCTEHKRATKTIQLWSTGDILTIHLKRFHSARAF 1070
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V+FPI LD+S Y+ + D E +YDL A+ NHYGGLGGGHYTA K
Sbjct: 1071 SDKIDVLVDFPIEGLDISSYVANTDLTPEDCLYDLIAVDNHYGGLGGGHYTASVK 1125
>gi|119614762|gb|EAW94356.1| ubiquitin specific peptidase 32, isoform CRA_a [Homo sapiens]
Length = 982
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 163/248 (65%), Gaps = 4/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 111 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 170
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + VAP + +A++AP+F+G+ Q D+QELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 171 QELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDAQELLAFLLDGLHEDLNRVHEKPYVE 230
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E + NH RN S++VD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 231 LKDSDGRPDWEVAAEVY-NHLRRNRSIVVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 289
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L LS C L E +LLAEV
Sbjct: 290 PLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLSDLCGLN-SEQILLAEV 347
Query: 557 YNHQIFRF 564
+ I F
Sbjct: 348 HGSNIKNF 355
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 597 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 656
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 657 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 694
>gi|327349181|gb|EGE78038.1| ubiquitin carboxyl-terminal hydrolase [Ajellomyces dermatitidis
ATCC 18188]
Length = 1730
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L YFL D Y ++N NPL G +A
Sbjct: 688 KDGRPRGVTGLSNLGNSCYMNSALQCVRSVEELTHYFLDDEYRKDLNPGNPLSHDGNVAK 747
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 748 AYANLLHQLFDENGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 807
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 808 QKKPYIEKPDSTDDMVSNSAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 867
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 868 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPVRVDVDIDKNASVKALKEYVGRRV 925
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + L
Sbjct: 926 GVDTNR-LVMAEIYKHKFYKMFENTSSL 952
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLK
Sbjct: 1342 LRQTRKKCGISLDECLDEFGKEEILSENDAWYCPRCKEHRRASKKFELWKCPDILVMHLK 1401
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD++ ++ ++G+S +YDL A+ NHYGGLGGGHYTAY
Sbjct: 1402 RFSANRGFRDKIDALVDFP-LELDMTGRVQMPEEGKSLIYDLIAVDNHYGGLGGGHYTAY 1460
Query: 873 AK 874
AK
Sbjct: 1461 AK 1462
>gi|239610392|gb|EEQ87379.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ER-3]
Length = 1750
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L YFL D Y ++N NPL G +A
Sbjct: 708 KDGRPRGVTGLSNLGNSCYMNSALQCVRSVEELTHYFLDDEYRKDLNPGNPLSHDGNVAK 767
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 768 AYANLLHQLFDENGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 827
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 828 QKKPYIEKPDSTDDMVSNSAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 887
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 888 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPVRVDVDIDKNASVKALKEYVGRRV 945
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + L
Sbjct: 946 GVDTNR-LVMAEIYKHKFYKMFENTSSL 972
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLK
Sbjct: 1362 LRQTRKKCGISLDECLDEFGKEEILSENDAWYCPRCKEHRRASKKFELWKCPDILVMHLK 1421
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD++ + ++G+S +YDL A+ NHYGGLGGGHYTAY
Sbjct: 1422 RFSANRGFRDKIDALVDFP-LELDMTGRVQMPEEGKSLIYDLIAVDNHYGGLGGGHYTAY 1480
Query: 873 AK 874
AK
Sbjct: 1481 AK 1482
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S D + +R L+ G+D+ ++P+ WE + WY +
Sbjct: 416 GPVDNSDLVLVTDPSITYTDEAGEQFVPLRPGLQMGEDFEVLPEDAWELIMKWYGLSRES 475
Query: 141 PALPR--KMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKK 183
PA+ R + G V + E+ ++ + SQT +L+++
Sbjct: 476 PAIVRYAHNTTAGSVEHVQYELNPPVFTILKLPNPSQTSTQLAQE 520
>gi|261195686|ref|XP_002624247.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
gi|239588119|gb|EEQ70762.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
Length = 1730
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 11/268 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GL NLGN+C+MNSALQC+ +L YFL D Y ++N NPL G +A
Sbjct: 688 KDGRPRGVTGLSNLGNSCYMNSALQCVRSVEELTHYFLDDEYRKDLNPGNPLSHDGNVAK 747
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+
Sbjct: 748 AYANLLHQLFDENGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFLLDGLQEDLNRI 807
Query: 430 KQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E AN+CW+ +KARNDS+I D+F G YKST+VCPVC K
Sbjct: 808 QKKPYIEKPDSTDDMVSNSAALQEFANKCWEIYKARNDSVITDLFAGMYKSTVVCPVCDK 867
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K L +
Sbjct: 868 VSIIFDPFSNLTLQLP--IENLWSKEIFFFPLHSRPVRVDVDIDKNASVKALKEYVGRRV 925
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAEL 571
+ + L++AE+Y H+ ++ FEN + L
Sbjct: 926 GVDTNR-LVMAEIYKHKFYKMFENTSSL 952
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
Query: 755 VKKTRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+++TR++ ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLK
Sbjct: 1342 LRQTRKKCGISLDECLDEFGKEEILSENDAWYCPRCKEHRRASKKFELWKCPDILVMHLK 1401
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RFS +R ++K+D V+FP L LD++ ++ ++G+S +YDL A+ NHYGGLGGGHYTAY
Sbjct: 1402 RFSANRGFRDKIDALVDFP-LELDMTGRVQMPEEGKSLIYDLIAVDNHYGGLGGGHYTAY 1460
Query: 873 AK 874
AK
Sbjct: 1461 AK 1462
>gi|324501191|gb|ADY40532.1| Ubiquitin carboxyl-terminal hydrolase 19 [Ascaris suum]
Length = 1051
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 154/250 (61%), Gaps = 3/250 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L +F GDY +IN NPLG G LA F + +
Sbjct: 336 GFTGLRNIGNTCFMNATLQMLVNCKELQIFFTGDYYKKDINATNPLGFGGRLAEVFAEFM 395
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++WS A P K +A APQF+ + QHD+ E L+FLLDGLHEDLNRV+ KPY
Sbjct: 396 KQMWSGMNRAFEPTKVKELVAEKAPQFANFAQHDAHEFLSFLLDGLHEDLNRVRSKPYTT 455
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ GRPD EV+NE W NH RNDS+ VD+F GQ KS L CP C +VSITFDPF+YL +
Sbjct: 456 TVEANGRPDIEVSNEAWANHLLRNDSVFVDLFHGQLKSRLQCPRCDQVSITFDPFVYLAV 515
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P P R+ V + + P+ F + G +++ A+S + + L L EV
Sbjct: 516 PFPKE-KRSSVVYFWPLDPCLKPIKFAIRYSADGTVSEMLDAVSQLVHVPT-KSLRLIEV 573
Query: 557 YNHQIFRFFE 566
NH+I R F+
Sbjct: 574 CNHRIARVFQ 583
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY-----S 818
SL+ L F E L P++ WYC +CKEH +ATK+L L+ LP +L+ LKRF Y S
Sbjct: 874 SLYDMLTMFSETERLKPEESWYCNKCKEHVEATKRLQLYRLPPILIIQLKRFVYTTSIMS 933
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
+ ++K D V +PI +LDLS ++ + +G++ YDL + H G GHY + ++
Sbjct: 934 MHRRSKDDRPVRYPISDLDLSDFLSETAPNGQTTKYDLTGVVCHSGSSYFGHYISMGRLE 993
Query: 877 A 877
+
Sbjct: 994 S 994
>gi|241949097|ref|XP_002417271.1| deubiquitinating enzyme 12, putative; ubiquitin carboxyl-terminal
hydrolase 12, putative; ubiquitin thiolesterase 12,
putative; ubiquitin-specific processing protease 12,
putative; ubiquitin-specific protease, putative [Candida
dubliniensis CD36]
gi|223640609|emb|CAX44887.1| deubiquitinating enzyme 12, putative [Candida dubliniensis CD36]
Length = 1309
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 198/344 (57%), Gaps = 26/344 (7%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
++Y +G GG GL N+GNTC+MNSALQCL+H P++ YF + Y E+N +NPLG
Sbjct: 314 NAYEEVAQG--GGHLGLSNMGNTCYMNSALQCLLHVPEINYYFFYNIYKKELNFDNPLGY 371
Query: 365 HGELALAFGDLLRKLWSSGR--AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
HG++A AFG LL++ + + ++++PR FK + R++ FSGY Q DSQELL++LLD L
Sbjct: 372 HGDVANAFGSLLKQAFDHVKNGSSISPREFKSTIGRYSSMFSGYLQQDSQELLSWLLDAL 431
Query: 423 HEDLNRVKQKPYIE---MKDS---GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR+ +KPY E +KD + ++AN CW HKARNDS+I+D+F G Y+STL
Sbjct: 432 HEDLNRIHKKPYCEKPELKDDEIDDPQAINKLANTCWNQHKARNDSVIIDLFTGLYQSTL 491
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG-LP---MPFTVTLMKHGCC 532
+CP C K SITFDPF LTLPLP + T T+ + G +P M V L K
Sbjct: 492 ICPDCGKKSITFDPFNDLTLPLPISKKWYHTFTIVDLSNEGVIPERIMKLEVELNKTSNF 551
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYRF 586
DL+ LS + E L + E++ + I+ F+ N IS I+D + ++ Y
Sbjct: 552 DDLLGYLSNFLNIPSTE-LFIYEIFQNAIYSDFQLDYNKNKFLPISDIIRDTDDVIVYIV 610
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
I + + N ++ +S + FG PL + +E
Sbjct: 611 PHNPAVDIIVPVFNAVEDADSSYQMVN----FFGIPLFVVMNKE 650
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 103/181 (56%), Gaps = 19/181 (10%)
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDV-------HELYDPSYIKDLP--VVHKTGFTV 755
++S I KD++L L DW ++ EL I +LP + K
Sbjct: 934 LNSTTLISKDTVL--------LCDWDKEIFQRCFGDKELQAWENISNLPNPELEKNRAHF 985
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ I+L CL +F T E LG D+WYCP+C EH++ATK + LW D+L HLKRF
Sbjct: 986 ERQRKAKITLSDCLKSFSTPEILGEHDLWYCPRCTEHKRATKTIQLWSTGDILTIHLKRF 1045
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYA 873
+R +K+D V+FPI LD+S Y+ + D E +YDL A+ NHYGGLGGGHYTA
Sbjct: 1046 HSARAFSDKIDVLVDFPIEELDISSYVANTDLKAEDCLYDLIAVDNHYGGLGGGHYTASV 1105
Query: 874 K 874
K
Sbjct: 1106 K 1106
>gi|440300667|gb|ELP93114.1| ubiquitin carboxyl-terminal hydrolase, putative [Entamoeba invadens
IP1]
Length = 934
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 118/250 (47%), Positives = 168/250 (67%), Gaps = 13/250 (5%)
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
PS S+ + + N +T+ +N+Y SS+ + + D K G KG + GL
Sbjct: 267 PSLSAYSSSCTATDYNKYTSS-NYNKYTSSSYRNYYDD--------EKTKDGTKG-VCGL 316
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKLWS 381
+NLGNTCFMNSALQCL+HT L ++F ++SD+INT+NPLG G+L A+ LL K W
Sbjct: 317 RNLGNTCFMNSALQCLLHTMPLNEFFNTANWSDDINTDNPLGTGGKLVNAWKVLLDKYWG 376
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
G + ++PR FK + FAPQFSGY Q DSQELL+FL+DG+HEDLN+VK+KPY+E+ D
Sbjct: 377 -GYSVLSPREFKSAIGEFAPQFSGYQQQDSQELLSFLVDGIHEDLNKVKKKPYVEIPDYN 435
Query: 442 GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPST 501
G DE A E WK +K RNDS+I +F GQ+KS +VC VC V++ FDP+++++L LP+
Sbjct: 436 GEGDEVWAQEEWKRYKMRNDSIITTLFAGQFKSNVVCDVCKHVNLRFDPYVFISLQLPNK 495
Query: 502 VTRTMTVTVF 511
++ T++ V+
Sbjct: 496 MS-TVSFNVY 504
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYSR 819
+ ++L+ C + F EE L D+ YC CK H+ KK+D+W ++LV HLKRF S
Sbjct: 767 DPVTLYECFELFEEEEHLTGDNTVYCSTCKTHQTCKKKMDIWSTNEILVIHLKRFGSVGG 826
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHYTAYAKV 875
+++K+ T V+FPI +LDL++Y+K D ++ +Y+L+A+SNH G LGGGHY A A+V
Sbjct: 827 SVRDKISTLVDFPIYDLDLTQYVKKYDPKTPPIYNLYAVSNHSGSLGGGHYVASARV 883
>gi|258565055|ref|XP_002583272.1| hypothetical protein UREG_06239 [Uncinocarpus reesii 1704]
gi|237906973|gb|EEP81374.1| hypothetical protein UREG_06239 [Uncinocarpus reesii 1704]
Length = 1102
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 236/477 (49%), Gaps = 80/477 (16%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L QYFL +Y ++N NPL +GE+A
Sbjct: 498 KDGKTRGVTGLSNLGNTCYMNSALQCVRSVEELTQYFLSNEYKKDLNPSNPLAHNGEVAK 557
Query: 371 AFGDLLRKLWSSGRAA-VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ AA +APR FK ++++ P FSGY QHDSQE + FLLDGL EDLNR+
Sbjct: 558 AYANLLHQMFDENAAASIAPRNFKHTVSKYGPSFSGYGQHDSQEFVLFLLDGLQEDLNRI 617
Query: 430 KQKPYIEMKDSG------GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPYIE DS E A+ W+ +KARNDS+I D+F G YKSTLVCPVC K
Sbjct: 618 HKKPYIEKPDSTDDMVSDKAALERFADRNWEIYKARNDSVITDLFAGMYKSTLVCPVCDK 677
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + + Y G + V + K+ ++AL
Sbjct: 678 VSIIFDPFSNLTLQLP--IENIWSRKIQYHPARGESIELEVDIDKNAS----VMALKEYV 731
Query: 544 CLKID---EGLLLAEVYNHQIFRFFEN-PA------------------------------ 569
+++ L++AEV++ +I++ F N PA
Sbjct: 732 AKRVNTDPRRLVMAEVFSRKIYKLFTNTPAISECNIGTSDVIAMYELETVPTSYDPDKAK 791
Query: 570 -----ELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLV 624
L ++ +DD+ VA FD ++ +I + I +R E A +R LFG P
Sbjct: 792 KQNHSMLYTAFRDDDADVA-SFDSERADRILVPIFHR--EVKAFSTKSHRQRPLFGIPRF 848
Query: 625 TYLEEEHLSGADIDIAVSKLLSPLRRTYSS----------AKAHGGKENGFLPEVIDELS 674
+ E D D + K+L+ + + H E+ D+ +
Sbjct: 849 AVITREE--AMDYDAILRKILAQVDNMTTQDILHESENDVTMRHQSAEDSDAVVTNDDDA 906
Query: 675 NSHNESVETAELE------DLCSRELSFQLSLTDERISS--CKPIQKDSILKPGKHI 723
NS++ ++ +E D+ R+ + S D SS C P +L+PG I
Sbjct: 907 NSNDSKIKMGSVEGEDGLVDVSMRDATDTSSQADSTKSSKTCMP----GVLQPGSFI 959
>gi|440291460|gb|ELP84729.1| hypothetical protein EIN_174040 [Entamoeba invadens IP1]
Length = 910
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 158/222 (71%), Gaps = 8/222 (3%)
Query: 291 GSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-L 349
G ++GS + D GYD+ + K+G KG + GLQNLGNTCFMNS++QC+VH L +YF
Sbjct: 267 GYNYGSRYYD---GYDN-DEMKRGTKG-VCGLQNLGNTCFMNSSIQCIVHVMPLVKYFER 321
Query: 350 GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
G + +E+NT NPLG G+LA A+ DL+ K W G + ++P++FK + FAPQFSGY QH
Sbjct: 322 GMWKNEVNTTNPLGTQGKLASAWADLVNKYWG-GHSYISPKSFKTAIGEFAPQFSGYQQH 380
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQEL++FL+DG+HEDLNRV +K Y++ D G + E A + W+ +K RNDS+I D+F
Sbjct: 381 DSQELMSFLIDGIHEDLNRVVKKVYVQSPDYNGETESEWAKKEWERYKIRNDSIITDLFT 440
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
GQ+KS +VC VC KV++ FD +++ +L +P+ T+ + TVF
Sbjct: 441 GQFKSKVVCDVCGKVNLKFDSYIFWSLTIPNK-TKLVKFTVF 481
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYSRYL 821
+SL C++AF EE L D+ YC CK+H+ A KK+DLW VLV HLKRF + S
Sbjct: 710 VSLEECIEAFQEEEKLDGDNKAYCSGCKQHQPAHKKMDLWCANKVLVIHLKRFGNASGSF 769
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K++T VNFPI LDL+KY+K+ E +YDL A+SNH G L GGHY A AKV
Sbjct: 770 RDKVNTLVNFPIEGLDLTKYIKADQKERKIYDLVAVSNHSGSLAGGHYVASAKV 823
>gi|71002130|ref|XP_755746.1| ubiquitin C-terminal hydrolase [Aspergillus fumigatus Af293]
gi|66853384|gb|EAL93708.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
Af293]
gi|159129801|gb|EDP54915.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
A1163]
Length = 1694
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 198/365 (54%), Gaps = 50/365 (13%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 668 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDIAK 727
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR L+ +G+++ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 728 AYANLLRMLYDEAGQSSFAPRQFKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 787
Query: 430 KQKPYIEMKDSGGR------PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPYIE DS +E A++CW +KARNDS+I D+F G YKSTLVCPVC K
Sbjct: 788 QKKPYIEKPDSTDDMVHDKVALKEFASKCWDIYKARNDSVITDLFAGMYKSTLVCPVCEK 847
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + +F+ P+ V + K+ K AL
Sbjct: 848 VSIIFDPFNNLTLQLP--IENLWSKEIFFFPLHRKPVIVDVEIDKNASIK----ALKELV 901
Query: 544 CLKID---EGLLLAEVYNHQIFRFFENPAELI-------------------SSIKDDEHI 581
K+ + L++AE+Y + ++ F+N A + ++ D+
Sbjct: 902 AKKMGSDPQRLVMAEIYKCKFYKMFDNSASIADCQIGQGDDIAIFEVESVPTNYNPDKRQ 961
Query: 582 VAY------------RFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPL-VTYLE 628
+Y FD + ++ + I NR + S+ +R LFGAPL V
Sbjct: 962 KSYFSYGRSDYEEIPSFDSPKADRMLVPIFNR-HYRPKSNNSGNMQRSLFGAPLYVIISR 1020
Query: 629 EEHLS 633
EE LS
Sbjct: 1021 EEALS 1025
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 111/177 (62%), Gaps = 20/177 (11%)
Query: 716 ILKPGKHIKVLLDWTDDVHELYDPSYIKDL-----------------PVVHKTGFTVKKT 758
+++PG+ I +LDW D H+ KD P + K +
Sbjct: 1246 LIRPGEGI--VLDWNDQAHDALFGGDKKDTDGLRGTPTWTNVERIPDPELAKRRDLRRSR 1303
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS S
Sbjct: 1304 KKRGVTLYECLDEFNKEEILSENDAWYCPRCKEHRRASKKFELWKTPDILVMHLKRFSAS 1363
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP+ LD+S ++S ++G+S +YDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1364 RGFRDKLDVLVDFPVEGLDMSGRVESPEEGKSLIYDLFAVDNHYGGLGGGHYTAYAK 1420
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 27/136 (19%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAE-RPGPIDNSDII 98
LKE +L+S W + +S S H + AE GP+DNSD++
Sbjct: 338 LKEKQKGYLVSMSWLKRV-------------LSRSSTHADKADKSAAEGEIGPVDNSDLV 384
Query: 99 QNGNGSSEG--DD-----LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR--- 145
+ + G D+ + +R L+ G+D+ +VPQ+ W+ + WY PA+ R
Sbjct: 385 LVTDPAITGFHDEAGEPFVPLRPGLQMGEDFEIVPQEGWDLIMRWYGLASQSPAIVRYAH 444
Query: 146 KMISEGIVNEKRVEVF 161
+ EG + E++
Sbjct: 445 NTVEEGDAQNIQYELY 460
>gi|358399567|gb|EHK48904.1| hypothetical protein TRIATDRAFT_289756 [Trichoderma atroviride IMI
206040]
Length = 1555
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 167/271 (61%), Gaps = 10/271 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G GL NLGNTC+MNSALQC+ +L +YFL + Y+ E+N NPLG +G++A
Sbjct: 540 KNGRSLGAVGLHNLGNTCYMNSALQCVRSVEELTKYFLTEAYASELNKSNPLGYNGKVAT 599
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ LLR+++ GR +V+PR FK + R F+G+ Q DSQE L FLLD L EDL+R+K
Sbjct: 600 AYNGLLREIYDEGRGSVSPRDFKNTVGRCRTTFAGWGQQDSQEFLGFLLDALQEDLSRIK 659
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 660 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITRKRDDSIIADLFTGMYKSTLKCPECGKI 719
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP + TV F N +P+ F V L KH + L L LS
Sbjct: 720 SITFDPFNNLTLPLPVENMWSKTVKFFPLN--DVPVQFEVELPKHSSIESLKLFLSIRTG 777
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ + L+ AE + + F+ ++N ++ I
Sbjct: 778 VPANR-LMGAEEFKDRFFKIYDNSGDISEEI 807
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 101/171 (59%), Gaps = 18/171 (10%)
Query: 722 HIKVLLDWTDDV------------HELYDPSYIKDLPVVHKTGFTVKKT-----RQEAIS 764
H +++DW+++ H DL ++ + + R I+
Sbjct: 1156 HEGLVVDWSEEAWETVFGYTGKKQHAAQGSKTFADLETINDPALKISQRKRQTRRSRGIT 1215
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L CLD F E L DMWYCP+CKEHR+A+KK DLW PD L+ HLKRFS S + ++K
Sbjct: 1216 LEECLDEFERAEVLSEQDMWYCPRCKEHRRASKKFDLWKTPDYLIAHLKRFSSSGWRRDK 1275
Query: 825 LDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LD V+FPI LDL S+ ++ +DG+ +YDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1276 LDVLVDFPIEGLDLTSRVIQKEDGKEEIYDLIAVDDHYGGLGGGHYTAYAK 1326
>gi|118362868|ref|XP_001014765.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89296426|gb|EAR94414.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1271
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GLQNLGNTCFMNSALQC+ +T L YFL Y EIN +N LG G+LA + +
Sbjct: 573 GLCGLQNLGNTCFMNSALQCMSNTIPLTIYFLKKIYLQEINEQNVLGTQGKLAKQYAKFI 632
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LW+ + +P A K +AR FSGY QHDSQE L+++LDGLHEDLNRVK K Y E
Sbjct: 633 KNLWTGNQRTFSPIALKMAVARLQSMFSGYQQHDSQEFLSYILDGLHEDLNRVKVKKYTE 692
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPD+ VA E W NH RN S+IVD+ QGQ+KS + CP CSK SITFDPF+ +L
Sbjct: 693 SIDSNGRPDQVVAKESWLNHLKRNQSIIVDLMQGQFKSKVTCPDCSKESITFDPFLTCSL 752
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
P+P+ + +++ + +AN + T
Sbjct: 753 PIPNKEIKVISMYLIFANNRKTAIEVKYT 781
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-K 822
+++ CL F E LG D+ WYCP+CK+H++A K++ ++ PD+L+ HLKRF S L K
Sbjct: 1042 NIYDCLKLFEQPERLGEDNEWYCPECKKHQKAQKQIVIYRAPDILILHLKRFKGSSGLFK 1101
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYD 853
+KL V+FPI LD++ ++ K+ Y+
Sbjct: 1102 SKLTKVVDFPIQGLDMTDFVIEKETPQSYYE 1132
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
+K+ + YDL+AI+NHYG LG GHYTAYA+ N
Sbjct: 1206 NKNDKRLFYDLYAITNHYGSLGFGHYTAYAQNN 1238
>gi|50546843|ref|XP_500891.1| YALI0B14597p [Yarrowia lipolytica]
gi|49646757|emb|CAG83142.1| YALI0B14597p [Yarrowia lipolytica CLIB122]
Length = 1449
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 159/258 (61%), Gaps = 8/258 (3%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAF 372
G G GL NLGNTC+MNSALQCLVH P++ +YFL G Y EIN +NP+G +G++ALAF
Sbjct: 517 GPTMGTTGLSNLGNTCYMNSALQCLVHVPEVVEYFLSGYYESEINKDNPIGKNGDVALAF 576
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
+L+R+++ + APR FK + + PQF+GY Q DSQE LA+LLD LHEDLNR+ QK
Sbjct: 577 AELVRRVYLDKSSTYAPRQFKSIVGEYGPQFAGYGQQDSQEFLAYLLDSLHEDLNRILQK 636
Query: 433 PYIEM----KDSGGRPDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
P + G P E VA E W H+ RNDS I+D+F G YKST+VCPV + SI
Sbjct: 637 PATTKPELDPERAGDPLEVARVAVESWDVHRLRNDSPILDLFTGMYKSTVVCPVSQQASI 696
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDPF LTLPLP + + + S P + L KH ++L +++
Sbjct: 697 TFDPFSDLTLPLPVDDSWSKDFIFVPYDTSQQPCIIPIELKKHSRFQELRQLVASKAGEN 756
Query: 547 ID-EGLLLAEVYNHQIFR 563
++ E L+ +EVY Q FR
Sbjct: 757 VNPESLMFSEVYMSQFFR 774
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ I L CLD F E L DD+WYCP CK+ RQATKK++LW P++LV HLKRFS SR
Sbjct: 1103 QGIDLSECLDLFSASEVLSDDDLWYCPVCKDFRQATKKIELWKCPEILVIHLKRFSSSRN 1162
Query: 821 LKNKLDTFVNFPILNLDLSKYM-KSKDGES-YVYDLFAISNHYGGLGGGHYTAYAK 874
++K+ V+FPI LDL++ + ++K +S +YDL + NH GGLGGGHYTA+AK
Sbjct: 1163 FRDKISEVVHFPIEGLDLTERVGEAKASDSPLIYDLIGVDNHMGGLGGGHYTAFAK 1218
>gi|67540368|ref|XP_663958.1| hypothetical protein AN6354.2 [Aspergillus nidulans FGSC A4]
gi|40739548|gb|EAA58738.1| hypothetical protein AN6354.2 [Aspergillus nidulans FGSC A4]
gi|259479427|tpe|CBF69639.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
AFUA_2G14130) [Aspergillus nidulans FGSC A4]
Length = 1418
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 169/279 (60%), Gaps = 21/279 (7%)
Query: 310 TAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
T K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++
Sbjct: 450 TRKDGKPRGNTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDV 509
Query: 369 ALAFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
A A+ +LLR ++ +G + APR K + R+ P FSGY Q DSQE L FLLDGL EDLN
Sbjct: 510 AKAYANLLRNIYDEAGHGSFAPRQLKNTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLN 569
Query: 428 RVKQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
R+++KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVC
Sbjct: 570 RIQKKPYIEKPDST---DEMVHNKEALKEFADKCWDIYKARNDSVITDLFAGMYKSTLVC 626
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
PVC KVSI FDPF LTL LP + + ++FY P+ V + K+ K L
Sbjct: 627 PVCDKVSIIFDPFNNLTLQLP--IENLWSKSIFYFPLHKKPIIIDVEIDKNSSIKALKEF 684
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKD 577
++ E L+++E+Y + ++ F+N +SSI D
Sbjct: 685 IAKKAGSD-PERLVMSEIYKSKFYKMFDN----VSSIAD 718
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 122/196 (62%), Gaps = 20/196 (10%)
Query: 697 QLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHE------LYDP---------SY 741
++ + ER + KP + ++ PG+ I +LDW D HE + DP +
Sbjct: 959 EIDMITERTVTPKPRPQRPLINPGEAI--VLDWNTDAHEALFSGDVRDPNGPRGAPTWTS 1016
Query: 742 IKDLPVVHKTGFTVKKTR--QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKL 799
I+ +P +TR ++ ++L CLD F EE L +D WYCP+CKEHR+A KK
Sbjct: 1017 IERMPDPELANRRALRTRRKKKGVTLNECLDEFNKEEILSENDAWYCPRCKEHRRARKKF 1076
Query: 800 DLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAIS 858
+LW PD+LV HLKRFS SR ++KLD V+FP+ LDL+ +++ ++G+S VYDLFA+
Sbjct: 1077 ELWKTPDILVMHLKRFSASRGFRDKLDVMVDFPVEGLDLTGRVEAPEEGKSLVYDLFAVD 1136
Query: 859 NHYGGLGGGHYTAYAK 874
NHYGGLGGGHYTAYAK
Sbjct: 1137 NHYGGLGGGHYTAYAK 1152
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 24/117 (20%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAE-RPGPIDNSDII 98
L+EG +++S W + ++ S H + + AE GP+DNSD++
Sbjct: 121 LQEGQKGYVVSMSWLKRV-------------LARSSTHADNIDKSAAEGEIGPVDNSDLV 167
Query: 99 QNGNGSSEG--DDLE-----VRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR 145
+ + G D+ E +R L+ G+D+ +VPQ+ W+ + WY + PA+ R
Sbjct: 168 LVTDPVNVGLKDEREQPFIPLRPGLQFGEDFEVVPQEGWDLIMQWYGLAEQSPAIVR 224
>gi|448105860|ref|XP_004200605.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|448109008|ref|XP_004201236.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382027|emb|CCE80864.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382792|emb|CCE80099.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
Length = 1309
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 213/415 (51%), Gaps = 51/415 (12%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
D+++ + GG GL NLGNTC+MNSALQCL+H P++ YF + + E+NT NPLG
Sbjct: 273 DTFSAERITSSGGDLGLSNLGNTCYMNSALQCLLHIPEVNYYFFYNIFEKELNTVNPLGY 332
Query: 365 HGELALAFGDLLRKLWSSGR----AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLD 420
G++A AFGDLL KL+ + +AV+PR FK K+ +++ F GY+Q DSQE L++LLD
Sbjct: 333 KGQIAKAFGDLLHKLFDQSKNDSFSAVSPRDFKFKIGQYSSVFRGYSQQDSQEFLSWLLD 392
Query: 421 GLHEDLNRVKQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQ 471
LHEDLNR+ +K Y E + DEEV A CW+ HK RNDS++VD+F G
Sbjct: 393 ALHEDLNRIIEKVYYEKPE---LKDEEVNDASAIKRLAETCWQQHKKRNDSVVVDLFTGM 449
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP---FTVTLMK 528
Y+STLVCP C K SITFDPF LTLPLP T T+ + L P V L K
Sbjct: 450 YQSTLVCPSCEKTSITFDPFNDLTLPLPVNKKWYHTFTIIDLSEEKLDNPIMKLEVELNK 509
Query: 529 HGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP---------AELISSIKDDE 579
DLI +S + DE L + E++N ++ F+ +ELIS D +
Sbjct: 510 SSNYDDLIKYVSEFLKVSTDE-LFVYEMFNKFFYKDFQAEYHTFKYLPVSELIS---DTD 565
Query: 580 HIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER----KLFGAP--LVTYLEEEHLS 633
I+ Y I + ++N Y+ G E FG P LV + ++E S
Sbjct: 566 EIIIYIIPHDPISDIVVTVLNT--------YVNGEEENQVINTFGLPLFLVLHKDDEAKS 617
Query: 634 GADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELED 688
I + L L R A + G E D N+S E E+ D
Sbjct: 618 MGKIKEKLVHLAGILTR----AIEYPGTEREIFYSAKDFPKLKKNDSSEDIEMAD 668
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 13/145 (8%)
Query: 743 KDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
K++P V K + E +SL CL +F E LG D+WYCP+CK+ ++ATK
Sbjct: 897 KNVPFVPNPQIEANKKKLEMQQRSTVSLIDCLRSFSVPEVLGDQDLWYCPKCKDFKKATK 956
Query: 798 KLDLWMLPDVLVFHLKRFS-YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES------- 849
+ LW + D+L HLKRF SR +K++ V+FPI LD+S ++ S ++
Sbjct: 957 TIQLWSIGDILAIHLKRFQGGSRSFSDKINMVVDFPIEGLDMSPFVASGQADNASAARSD 1016
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAK 874
+YDL A+ NHYGGLGGGHYTA K
Sbjct: 1017 LLYDLIAVDNHYGGLGGGHYTASVK 1041
>gi|302308992|ref|NP_986174.2| AFR627Cp [Ashbya gossypii ATCC 10895]
gi|299790892|gb|AAS53998.2| AFR627Cp [Ashbya gossypii ATCC 10895]
gi|374109406|gb|AEY98312.1| FAFR627Cp [Ashbya gossypii FDAG1]
Length = 1287
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 156/263 (59%), Gaps = 16/263 (6%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTC+MNSALQCL+H P+ YFL + Y E+N ENPLG G +A AF ++
Sbjct: 344 GTIGLSNLGNTCYMNSALQCLLHIPEFKDYFLYNGYEKEVNIENPLGHKGHIAWAFASMV 403
Query: 377 RKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
+ L+ S + +PR FK + FSGY Q DSQE LAFLLDGLHEDLNR+ +KP
Sbjct: 404 QALFGKRHSAATSYSPRNFKNTIGHLNSMFSGYQQQDSQEFLAFLLDGLHEDLNRIIEKP 463
Query: 434 YIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
Y+E + D +++A++ W HK RNDS+I D+F G YKSTL+CPVC K S+
Sbjct: 464 YVEKPELTSTDDTAEFKVIKKLADDTWGKHKLRNDSVITDLFVGLYKSTLICPVCKKTSV 523
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDP+ LTLPLP T + V +F N P V L K + L A C
Sbjct: 524 TFDPYNDLTLPLPVNSTWSNKVLIFPHNSH--PYSLEVELKKTDTYQQ--LKEYVAKCAN 579
Query: 547 IDEGLLL-AEVYNHQIFRFFENP 568
+D L AEV+NHQ + +E P
Sbjct: 580 VDPANLFGAEVFNHQFYNNYEAP 602
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
+ + ++ I+L CL F T E LG D W+CP CKEHRQATK+++LW PD+L+ HLKRF
Sbjct: 955 RASGEKKITLHDCLTLFSTPEVLGATDSWFCPNCKEHRQATKQIELWNAPDILLIHLKRF 1014
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY-VYDLFAISNHYGGLGGGHYTAYAK 874
R +K+ V+FPI +LD++ Y+ K+ + +YDL A+ NHYGGLGGGHYTAY K
Sbjct: 1015 ENQRSFSDKIADTVHFPITDLDMTPYLVYKNEDKGDIYDLIAVDNHYGGLGGGHYTAYVK 1074
>gi|156380826|ref|XP_001631968.1| predicted protein [Nematostella vectensis]
gi|156219017|gb|EDO39905.1| predicted protein [Nematostella vectensis]
Length = 1526
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 156/245 (63%), Gaps = 3/245 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNSALQCL +T L Q+F + E+N NPLGM G +A +GDL+
Sbjct: 654 GATGLSNLGNTCFMNSALQCLSNTQPLTQFFTAKCHYYELNRTNPLGMKGHIARRYGDLV 713
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LWS ++AP + + R+AP+F+G+ QHD+QE L+FLLDGLHEDLNRV KPY+E
Sbjct: 714 EDLWSGSSRSLAPLKLRWTIGRYAPRFNGFQQHDAQEFLSFLLDGLHEDLNRVHDKPYVE 773
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GR DE VA E W NH RN S+IVD+FQGQ KS + C C VS FDPF +L+L
Sbjct: 774 LKDSDGRLDEIVAQEAWDNHIKRNQSIIVDLFQGQLKSQVRCVECGYVSARFDPFTFLSL 833
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + + + V +G+ P+ + + L K + L+ C + + + LLL EV
Sbjct: 834 PLPMDNSIFIEIVVVPLSGA-TPVKYGLLLNNDDKYKAVRKELAKLCVINVAQ-LLLVEV 891
Query: 557 YNHQI 561
Y +
Sbjct: 892 YGATV 896
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ ++W L S ++ H++ ++ + E I L+ CL AF EE LG +++W
Sbjct: 1141 IAIEWDPTTLHLRYQSSLEKNCEEHESVERSRRLQTEPIDLYECLRAFTNEEELGDEELW 1200
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YC +CK+HR A KKL++W LP +LV HLKRF Y K + VN+P+ D S ++
Sbjct: 1201 YCNKCKKHRLAVKKLEIWSLPPILVIHLKRFQYVNGHWVKSNKIVNYPMAGFDPSAFLVP 1260
Query: 845 KDGESYV 851
+ S++
Sbjct: 1261 RPPGSHL 1267
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 78 MNGVSSKRAER-PGPIDNSDIIQNGNG-----SSEGDDLEVRRNLEEGQDYVLVPQQVWE 131
MNG + E PG IDN+ +I+ + EG L+ L +D+ ++P+ VW
Sbjct: 441 MNGHCTPEVEPGPGQIDNTSLIEPETRKVMILTGEGGRLKRSVPLGRVRDFEILPEPVWR 500
Query: 132 KLFCWYKGGPALPRKMI 148
L WY GGPALPR ++
Sbjct: 501 ALLTWYGGGPALPRTVV 517
>gi|354546306|emb|CCE43036.1| hypothetical protein CPAR2_206790 [Candida parapsilosis]
Length = 1322
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 179/314 (57%), Gaps = 27/314 (8%)
Query: 289 YPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF 348
+P +F + ++ D K GG GL NLGNTC+MNSALQCL+H P++ QYF
Sbjct: 315 FPIDAFVESHINQSDN--------KENAGGHMGLSNLGNTCYMNSALQCLLHVPEINQYF 366
Query: 349 LGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGR--AAVAPRAFKGKLARFAPQFSG 405
+ Y E+N +NPLG +G++A AFG LL++ + + ++++PR FK + R++ FSG
Sbjct: 367 FHNIYQKELNADNPLGYNGDVANAFGSLLKQAFDPAKTSSSISPRDFKHTIGRYSSMFSG 426
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIE---MKDSGGRPDEEVAN---ECWKNHKAR 459
Y Q DSQELL++LLD LHEDLNR+ QKPY E +KD + +A CW HK R
Sbjct: 427 YLQQDSQELLSWLLDALHEDLNRILQKPYCEKPELKDDEVDDKDAIAKLSETCWNQHKQR 486
Query: 460 NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLP 519
NDS+I D+F G Y+S LVCP C K SITFDPF LTLPLP T T+ G+ L
Sbjct: 487 NDSVITDLFTGLYESILVCPDCGKTSITFDPFNDLTLPLPINKKWYHTFTIVDLAGNKLE 546
Query: 520 ---MPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA------E 570
M V L DLI LS+ + D+ L L EV+ H I+ F+
Sbjct: 547 SRIMRLEVELKTSSNYDDLINYLSSFLNIDKDD-LFLYEVFQHGIYADFQKNRIKNKFLP 605
Query: 571 LISSIKDDEHIVAY 584
+ IKD + +V Y
Sbjct: 606 ITEVIKDGDDVVVY 619
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 79/119 (66%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ ISL CL +F T E LG D+WYCP CK+H++ATK + +W D+L HLKRF
Sbjct: 1003 ERQRKSKISLADCLKSFSTPEVLGEHDLWYCPSCKDHKRATKSIQIWSTGDILTIHLKRF 1062
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+R +K+D V+FPI LD+ Y+ + + +YDL A+ NHYGGLGGGHYTA K
Sbjct: 1063 HSARAFSDKIDVVVDFPIEGLDIGPYVANPQEKDCIYDLIAVDNHYGGLGGGHYTASVK 1121
>gi|310798441|gb|EFQ33334.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 1490
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 294/640 (45%), Gaps = 99/640 (15%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP ++ + I LK +D K G++ +++S W + G +P
Sbjct: 89 LPPMEEQIKTIQTLLKAFNDEPPKVGHVAYIVSRSWVE--KALALGGDPKF--------- 137
Query: 78 MNGVSSKRAERP-GPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ-DYVLVPQQVWEKLFC 135
+ P GP+DNSD+I GDD VR G + L P+ W +
Sbjct: 138 ---AKKETTNEPLGPVDNSDLILEVLQLPNGDDF-VRMKPGTGMGECELFPEDAWTLVSE 193
Query: 136 WY---KGGPALPRKMISEG--------IVNEKRVEVFXL-------CLKLIDSRDNSQTV 177
WY G + R+ I+ ++ E VF + LID S+
Sbjct: 194 WYGVKDGQKPIVRRAINAAPDAASPANVLFELNPPVFTVHRLWSLSSPILIDDELKSKNP 253
Query: 178 IRLSKKAST--RQLYEKVCKLRGIE-QEKARIWDYFN---KQRSTSPLDV----SDQTLD 227
+ L + A+T Y+++ +L G+ K R+W Q + P + S
Sbjct: 254 LILPRSATTPYNSFYKEIKQLTGVSLDRKMRVWQINQMPAGQEGSPPPALTPPDSPNPDK 313
Query: 228 DAMLQMD--QDILLEV---------------QVDNGISMDSTGN----------DLALVP 260
DA D Q +L+EV VDN ++ + G+ D+ LV
Sbjct: 314 DAEGSSDPWQRMLVEVPNFTRLGSADRQVVPAVDNTVNPNYNGSSPLSVHGLMQDMTLVI 373
Query: 261 IEPSRSSLTIA----GGPA----LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
E + ++ GG S G T G S G + T +
Sbjct: 374 DEELTKNTWVSNYFKGGKNDKILASRGSATSLATQGKAGDSSGRSSPAPSGPVTRGRTQQ 433
Query: 313 KGEKG---GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
K + G G GLQNLGNTC+MNSALQC+ +L +YFL D Y +E+N NPLG G++
Sbjct: 434 KKKPGRGLGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTDQYKEELNKANPLGYKGQV 493
Query: 369 ALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A+A+G LL+++++ R AV+PR FK + R F G+ Q D+QE L FLLD L EDL+R
Sbjct: 494 AMAYGGLLKEIYAESRGAVSPRDFKNTVGRARSTFQGWGQQDTQEFLGFLLDALQEDLSR 553
Query: 429 VKQKPYIEMKDSGGRPDEEVAN---------ECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
+K+KPYIE DS DE + N E W + R+DS++ D+F G YKSTL CP
Sbjct: 554 IKKKPYIEKPDST---DEMIGNEEAIRKMAEEVWDITRKRDDSVVADLFTGLYKSTLKCP 610
Query: 480 VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
C K+SITFDPF LTLPLP + TV + N + P+ V L KH + L A+
Sbjct: 611 TCDKISITFDPFNNLTLPLPMEDMWSRTVKFYPLNDA--PVQIEVELSKHSAIELLKKAV 668
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDE 579
S + + E L+ AE + + F+ +++ +++ I+ ++
Sbjct: 669 SDKTGVPV-ELLIGAEEFKGKFFKIYDDNSDVSDEIQSND 707
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 20/203 (9%)
Query: 690 CSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY---DPSYIKDL- 745
S+E SFQ+ + + S I+ +++ + I ++DW++D +L DP +D
Sbjct: 1011 SSKEQSFQVVDVEPQPSPLDNIRGGPLVRLDEGI--VVDWSEDTWDLVFGRDPRDAEDNR 1068
Query: 746 -------------PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEH 792
PV+ + + +++ I+L CLD F E L DMWYCP+CKEH
Sbjct: 1069 GQKTFGDVEKLRDPVLDQKRKSRLARKKQGITLDECLDEFEKAEVLSEQDMWYCPRCKEH 1128
Query: 793 RQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYV 851
R+A+KK DLW PD+LV HLKRFS + + ++KLD V+FPI LDL K + ++ G+ +
Sbjct: 1129 RRASKKFDLWKTPDILVVHLKRFSSAGWRRDKLDVLVDFPIEGLDLHKRVLCQETGKEEI 1188
Query: 852 YDLFAISNHYGGLGGGHYTAYAK 874
YDL A+ +H+GGLGGGHYTAY +
Sbjct: 1189 YDLIAVDDHFGGLGGGHYTAYGR 1211
>gi|397573872|gb|EJK48912.1| hypothetical protein THAOC_32253, partial [Thalassiosira oceanica]
Length = 732
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 179/337 (53%), Gaps = 45/337 (13%)
Query: 293 SFGSTFMDMDDGYDSYNT--AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL- 349
S G MD +D + + AK ++ GL NLGNTCFMNS LQCL HT L YFL
Sbjct: 254 SDGPLGMDDEDEFPALGAQPAKPVKRKRATGLGNLGNTCFMNSTLQCLAHTAPLRDYFLS 313
Query: 350 GDYSDEINTENPLGMHGELALAFGDLLRKLWSS--------GRA---------------- 385
G + D++NT+NPLG GELA F LL ++W + GR
Sbjct: 314 GRFRDDLNTDNPLGTGGELAREFASLLTEMWRTKPPSTLNGGRHRGYGGKGLGWGGSHYS 373
Query: 386 ---------AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
PR+FK L + A QF GY+QHDSQEL +LLD LHED NRV++KPY+E
Sbjct: 374 RYSASGDHDTTYPRSFKSTLGKHAEQFVGYDQHDSQELAIYLLDALHEDTNRVRKKPYVE 433
Query: 437 MKDSG-GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
+ G G D E + W H R DS I++ F GQ KS L CPV S TFDP MYL+
Sbjct: 434 KPEQGPGESDAEASETAWAAHLMREDSRILEQFMGQIKSRLECPVTGNTSTTFDPSMYLS 493
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL---ILALSTACCLK---IDE 549
+P+P + RTMTVT G FTVTL K+ L ++ L+ C +E
Sbjct: 494 VPIPGSTDRTMTVTFVPLEGER--RAFTVTLGKNSTVVALRSKVVDLARECYGAPGLAEE 551
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
+ L +V+N ++++F++ E I SIKD + VAY
Sbjct: 552 DVALCDVFNDKVWKFYDKQDEAIDSIKDTDVTVAYEL 588
>gi|392868885|gb|EAS30236.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 1527
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 198/381 (51%), Gaps = 56/381 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K + G+ GL NLGNTC+MNSALQC+ +L QYFL +Y ++N NPL +G++A
Sbjct: 502 KDSKTRGVTGLSNLGNTCYMNSALQCVRSVEELTQYFLANEYKKDLNPSNPLSHNGDVAR 561
Query: 371 AFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +LL +++ +++PR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 562 TYANLLHQMFDENAPDSISPRNFKLTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 621
Query: 430 KQKPYIEMKDSGG------RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPYIE DS +E A+ W+ +KARNDS+I D+F G YKST+VCP C K
Sbjct: 622 HKKPYIEKPDSTDDMVHDKAALQEFADRNWEIYKARNDSVITDLFAGMYKSTVVCPACDK 681
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + V++ G P+ V + K+ K AL
Sbjct: 682 VSIIFDPFSNLTLQLP--IENVWSKYVYFFPAHGEPLLIDVEIDKNASIK----ALKEYV 735
Query: 544 CLKIDEG---LLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
K++ L++AE+Y +I++ F N + + SI ++I Y
Sbjct: 736 AKKVNSDPRRLVMAEIYTQKIYKLFSNTSAISDCSIGQSDNIAMYELETIPTSYDPDKAK 795
Query: 586 --------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
FD +Q +I + I NR + S + Y + +R LFG P
Sbjct: 796 RQSYSMLYTGLRGDDADIVSFDSEQADRILVPIFNRVVKTSVTKYAR--QRPLFGVPRFA 853
Query: 626 YLEEEHLSGADIDIAVSKLLS 646
+ E D D + K+L+
Sbjct: 854 VITREE--AMDYDAILRKVLA 872
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 105/177 (59%), Gaps = 23/177 (12%)
Query: 717 LKPGKHIKVLLDWTDDVHELY------------------DPSYIKDLPVVHKTGFTVKKT 758
++PG+ I +LDW + H+ +P + D + K K
Sbjct: 1104 IRPGEAI--VLDWNESAHDALFGGDPRDKESLRGIPTWENPQRLPDPELARKRQLRQSKK 1161
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW +PD+LV HLKRFS +
Sbjct: 1162 RM-GISLAECLDEFGREEILSENDAWYCPRCKEHRRASKKFELWTVPDILVMHLKRFSAN 1220
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP L LD++ + DG+S +YDL A+ NHYG LGGGHYTAYAK
Sbjct: 1221 RGFRDKLDVLVDFP-LELDMTGRAQAPNDGKSMMYDLIAVDNHYGTLGGGHYTAYAK 1276
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S+ D + +R L+ G+D+ + PQ+ W+ + WY K
Sbjct: 207 GPVDNSDLVLVTDPSTLFKDEAGEPFVPLRPGLQMGEDFEIFPQEAWDLIISWYGLSKNS 266
Query: 141 PALPRKM-------ISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRLSKKAS 185
PA+ R +E I E VF + LKL S D S+T ++ +
Sbjct: 267 PAIVRYAHNTNTPGNTENIQYELNPPVFTI-LKLPSPTNPAVQLSTDKSRTPVKTLASSH 325
Query: 186 T--RQLYEKVCKLRGIE-QEKARIW 207
T +Q KL IE K R+W
Sbjct: 326 TPFQQWLRNAKKLASIEPTTKVRVW 350
>gi|340522027|gb|EGR52260.1| predicted protein [Trichoderma reesei QM6a]
Length = 1658
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 167/271 (61%), Gaps = 10/271 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G G GL NLGNTC+MNSALQC+ +L +YFL D Y E+N NPLG +G++A+
Sbjct: 625 RNGRSVGAVGLHNLGNTCYMNSALQCVRSVEELTKYFLTDAYVSELNKTNPLGYNGKVAM 684
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G LLR+++ GR +V+PR FK + R F+G+ Q DSQE L FLLD L EDL+R+K
Sbjct: 685 AYGSLLREIYDEGRGSVSPRDFKNTVGRCRSTFAGWGQQDSQEFLGFLLDALQEDLSRIK 744
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 745 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITRKRDDSVIADLFTGMYKSTLKCPECGKI 804
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP + TV F N +P+ F V L KH + L LS
Sbjct: 805 SITFDPFNNLTLPLPVENMWSKTVKFFPLN--DVPVMFEVELPKHSSIEALKSFLSIRTG 862
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ + L+ AE + + F+ ++N ++ I
Sbjct: 863 VPPNR-LMGAEEFKDRFFKIYDNSGDVSEEI 892
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CLD F E L DMWYCP+CKEHR+A+KK DLW PD LV HLKRFS S +
Sbjct: 1313 GITLDECLDEFERAEVLSEQDMWYCPRCKEHRRASKKFDLWKSPDYLVAHLKRFSSSGWR 1372
Query: 822 KNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++KLD V+FPI LDL S+ ++ ++G+ +YDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1373 RDKLDVLVDFPIEGLDLTSRVIQKEEGKQEIYDLIAVDDHYGGLGGGHYTAYAK 1426
>gi|119190871|ref|XP_001246042.1| hypothetical protein CIMG_05483 [Coccidioides immitis RS]
Length = 1671
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 198/381 (51%), Gaps = 56/381 (14%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K + G+ GL NLGNTC+MNSALQC+ +L QYFL +Y ++N NPL +G++A
Sbjct: 646 KDSKTRGVTGLSNLGNTCYMNSALQCVRSVEELTQYFLANEYKKDLNPSNPLSHNGDVAR 705
Query: 371 AFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +LL +++ +++PR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 706 TYANLLHQMFDENAPDSISPRNFKLTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 765
Query: 430 KQKPYIEMKDSGG------RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPYIE DS +E A+ W+ +KARNDS+I D+F G YKST+VCP C K
Sbjct: 766 HKKPYIEKPDSTDDMVHDKAALQEFADRNWEIYKARNDSVITDLFAGMYKSTVVCPACDK 825
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSI FDPF LTL LP + + V++ G P+ V + K+ K AL
Sbjct: 826 VSIIFDPFSNLTLQLP--IENVWSKYVYFFPAHGEPLLIDVEIDKNASIK----ALKEYV 879
Query: 544 CLKIDEG---LLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
K++ L++AE+Y +I++ F N + + SI ++I Y
Sbjct: 880 AKKVNSDPRRLVMAEIYTQKIYKLFSNTSAISDCSIGQSDNIAMYELETIPTSYDPDKAK 939
Query: 586 --------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
FD +Q +I + I NR + S + Y + +R LFG P
Sbjct: 940 RQSYSMLYTGLRGDDADIVSFDSEQADRILVPIFNRVVKTSVTKYAR--QRPLFGVPRFA 997
Query: 626 YLEEEHLSGADIDIAVSKLLS 646
+ E D D + K+L+
Sbjct: 998 VITREE--AMDYDAILRKVLA 1016
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 105/177 (59%), Gaps = 23/177 (12%)
Query: 717 LKPGKHIKVLLDWTDDVHELY------------------DPSYIKDLPVVHKTGFTVKKT 758
++PG+ I +LDW + H+ +P + D + K K
Sbjct: 1248 IRPGEAI--VLDWNESAHDALFGGDPRDKESLRGIPTWENPQRLPDPELARKRQLRQSKK 1305
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R ISL CLD F EE L +D WYCP+CKEHR+A+KK +LW +PD+LV HLKRFS +
Sbjct: 1306 RM-GISLAECLDEFGREEILSENDAWYCPRCKEHRRASKKFELWTVPDILVMHLKRFSAN 1364
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V+FP L LD++ + DG+S +YDL A+ NHYG LGGGHYTAYAK
Sbjct: 1365 RGFRDKLDVLVDFP-LELDMTGRAQAPNDGKSMMYDLIAVDNHYGTLGGGHYTAYAK 1420
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S+ D + +R L+ G+D+ + PQ+ W+ + WY K
Sbjct: 351 GPVDNSDLVLVTDPSTLFKDEAGEPFVPLRPGLQMGEDFEIFPQEAWDLIISWYGLSKNS 410
Query: 141 PALPRKM-------ISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRLSKKAS 185
PA+ R +E I E VF + LKL S D S+T ++ +
Sbjct: 411 PAIVRYAHNTNTPGNTENIQYELNPPVFTI-LKLPSPTNPAVQLSTDKSRTPVKTLASSH 469
Query: 186 T--RQLYEKVCKLRGIE-QEKARIW 207
T +Q KL IE K R+W
Sbjct: 470 TPFQQWLRNAKKLASIEPTTKVRVW 494
>gi|115485479|ref|NP_001067883.1| Os11g0473200 [Oryza sativa Japonica Group]
gi|108864372|gb|ABA93659.2| Ubiquitin carboxyl-terminal hydrolase 5, putative, expressed [Oryza
sativa Japonica Group]
gi|113645105|dbj|BAF28246.1| Os11g0473200 [Oryza sativa Japonica Group]
Length = 382
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 211/361 (58%), Gaps = 22/361 (6%)
Query: 19 PCTP-DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P P +EER +++D+ ++ KEG+ +FLI+ RW++SW YV D + N + + H
Sbjct: 14 PEVPAEEERALIRDITVAAEAHAKEGDTFFLITHRWWQSWIDYVIQD---LANSTNNGSH 70
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+ S RPG IDN+D+I + ++E+ L EG+DY+L+PQQVWEKL WY
Sbjct: 71 HHEHGSNVLRRPGAIDNTDLIDDTASEVSNMEIELHDTLVEGRDYILLPQQVWEKLHGWY 130
Query: 138 KGGPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKL 196
GGP LPRK I+ G+ + +EV+ L L+L+ + Q VIR+SKK + +L++K C++
Sbjct: 131 GGGPTLPRKAINTGLSQTDLAIEVYPLRLQLLLAPKGEQAVIRISKKDTVGELHKKACEV 190
Query: 197 RGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDS--TGN 254
+ ++ IWDY+ + R S +D ++TLDDA +QMDQDIL+EV D S+D G+
Sbjct: 191 FDLIPDEVCIWDYYGRTRH-SLMDNLEKTLDDANIQMDQDILVEVTTDANGSLDGGCIGS 249
Query: 255 DLALVPIEPSRSSLTI-AGGPALSNGHTTGYRFNQYPGSSFGSTFM----------DMDD 303
+E +SL A LSN + N Y S+ S+ D+D+
Sbjct: 250 IQENEYLERESTSLIADASKSGLSN---ENFASNNYTSRSYSSSLTQSQYLRSSNGDLDN 306
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLG 363
+ + +G GL GL NLGNTCFMNSA+QCLVHTP+ A+YF DY EIN +NPLG
Sbjct: 307 MHGTSAMITRGSPLGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHREINWQNPLG 366
Query: 364 M 364
M
Sbjct: 367 M 367
>gi|320163863|gb|EFW40762.1| ubiquitin specific protease 41 [Capsaspora owczarzaki ATCC 30864]
Length = 1177
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 166/277 (59%), Gaps = 11/277 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GLQNLGNTCFMNS LQCL +L YFL D + IN ++ LGM G++A A+ +
Sbjct: 404 GLTGLQNLGNTCFMNSVLQCLSAARELRDYFLSDAFRQHINKQSTLGMQGQMAEAYSEFS 463
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LWS +AP K +FA FSG+ QHDSQE ++F LDGLHED+N + +KPY+E
Sbjct: 464 KHLWSGEYQYIAPHQLKQVSNKFATMFSGFGQHDSQEFMSFFLDGLHEDVNLIGKKPYLE 523
Query: 437 MKDSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
D RPDE +A+ W HK R++S IVD+FQGQYKST+VCP C +VS+ FDPFMY
Sbjct: 524 --DVERRPDESDASMADRAWGQHKLRDNSHIVDLFQGQYKSTVVCPECDRVSVKFDPFMY 581
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMP----FTVTLMKHGCCKDLILALSTACCLKIDE 549
L+LP+P+ TR M V V A + P VT+ G ++ A++ +
Sbjct: 582 LSLPIPTLQTRKMGVLVSLAETAARPQAQLVRCCVTVPLTGTVLAILEAIAAMLGVSSAR 641
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
L+L E +++ R F+ E + I D + +VAY
Sbjct: 642 KLVLCEYDRYRLRRVFDE-REAVQRIYDYQDLVAYEL 677
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+E I+L CL F EE LG D+ WYC +C++H+QATK + LW LP +L+ LKRFS+SR
Sbjct: 988 EEKITLQKCLSLFTKEEKLGVDEAWYCSKCQKHQQATKSMTLWRLPKLLIVQLKRFSFSR 1047
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAK 874
++KL++ V FP+ NLDLS Y++ + + + VYDLFA+SNHYG GGHYTA+ K
Sbjct: 1048 IYRDKLNSLVEFPLTNLDLSDYVQGAEHDHTPVYDLFAVSNHYGMAFGGHYTAFTK 1103
>gi|366998069|ref|XP_003683771.1| hypothetical protein TPHA_0A02540 [Tetrapisispora phaffii CBS 4417]
gi|357522066|emb|CCE61337.1| hypothetical protein TPHA_0A02540 [Tetrapisispora phaffii CBS 4417]
Length = 1286
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 194/368 (52%), Gaps = 43/368 (11%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPL 362
Y YN + G G GL NLGNTC+MNSALQCL H P + YF G Y +EIN +NPL
Sbjct: 384 NYFHYNPIQNG--VGNVGLNNLGNTCYMNSALQCLAHIPPIRDYFKFGAYKNEINLDNPL 441
Query: 363 GMHGELALAFGDLLRKLWSSG---RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
G G +A AF L++ L+ + A+ AP FK + + FSGY Q DSQE LAFLL
Sbjct: 442 GFQGNIANAFSALVQNLYKNQFIPSASYAPSQFKLTIGHYNQMFSGYFQQDSQEFLAFLL 501
Query: 420 DGLHEDLNRVKQKPYIE---MKDSGGRPDEEV----ANECWKNHKARNDSLIVDVFQGQY 472
DGLHEDLNR+K KPY+E + D D + A + + H RNDS+I+D+F G Y
Sbjct: 502 DGLHEDLNRIKDKPYVEKPSLADGSDVNDYNIIARLAADTLEAHLKRNDSIIIDLFVGLY 561
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KSTL CPVC+ VSITFDP+ LTLP+P V +F N P V L K
Sbjct: 562 KSTLKCPVCNHVSITFDPYCDLTLPIPVESVWNFKVKIFPQNSP--PCIMEVELKKTSTY 619
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA---------ELISSIKDDEHIVA 583
++L +S + D L E+YNHQ+F +FE+ ELIS + D I+
Sbjct: 620 QELKEYVSNIVNIAFD-SLYGCEIYNHQVFNYFESLTSSSRYLPIKELISDLDD---IIF 675
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERK--LFGAPLVTYLEEEHLS--GA---D 636
Y + ++N + G+ + LFG P L +E L+ GA
Sbjct: 676 YELIVDPDKHMVFPVLNTL--------IDGTYKSPMLFGVPFFIVLRKEDLNNPGAIRKS 727
Query: 637 IDIAVSKL 644
++I+ SKL
Sbjct: 728 LEISFSKL 735
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 739 PSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
P+ IK++ + KT + ++ I+L L+ F E LG +D WYCP+CK HRQA+K+
Sbjct: 939 PALIKNVEL-EKTRELGQDKEEKNITLEDSLNLFERAEVLGINDSWYCPKCKHHRQASKQ 997
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESY-VYDLFAI 857
+ LW PD+L HLKRF +K+D V+FPI LDLSK++ K +YDL A+
Sbjct: 998 IQLWSTPDILTIHLKRFETQGSFSDKIDDVVDFPINGLDLSKHILDKSTSQLNIYDLIAV 1057
Query: 858 SNHYGGLGGGHYTAYAK 874
NHYGGLGGGHYTAY K
Sbjct: 1058 DNHYGGLGGGHYTAYIK 1074
>gi|344294316|ref|XP_003418864.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 31-like [Loxodonta africana]
Length = 1354
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 195/650 (30%), Positives = 276/650 (42%), Gaps = 139/650 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 130 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRSEPSPDPEQPAGRGAQGQGE 189
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 190 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 249
Query: 428 R-VKQKPYIEMK---DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
VKQ +K ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 250 HSVKQSGQTPLKPPSETDIMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 301
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+ST
Sbjct: 302 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSTET 361
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIKD----- 577
+ D+ +L L V+ FE P E I S +
Sbjct: 362 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 421
Query: 578 ---------DEHIVA--YRFDRKQGG-----------KIKLEIVNRWQEKSASDYLKGSE 615
D H ++ + KQG KI L + NR G +
Sbjct: 422 NLNHLKFGLDHHRLSSPTQAAAKQGKMDLPSTRAGSDKIVLLVCNR--------ACTGQQ 473
Query: 616 RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELS 674
K FG P V +LE+ D+ ++L K FL P V ++
Sbjct: 474 GKRFGLPFVLHLEKT----IAWDLLQKEILE--------------KMKCFLRPTVCVQVC 515
Query: 675 NSHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDV 733
V + L +E T ER + SC P H+K++++W +
Sbjct: 516 PFSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKET 568
Query: 734 HELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYC 786
+ + YI D V ++K R + +L C + EE L PDD W C
Sbjct: 569 KDFLFVNAEDEYIPDAESVR-----LQKERHHQPQTCTLSQCFQLYTKEERLAPDDAWRC 623
Query: 787 PQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS------- 839
P CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 624 PHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRS 683
Query: 840 ---------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTAY K
Sbjct: 684 QSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCK 733
>gi|270008551|gb|EFA04999.1| hypothetical protein TcasGA2_TC015078 [Tribolium castaneum]
Length = 1682
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 249/542 (45%), Gaps = 90/542 (16%)
Query: 63 GDEPSIDNISFDSPHMNGVSSKRAE-RPGPIDNSDIIQNG-----NGSSEGDDLEVRRNL 116
GD SI + S S SKR++ PGPIDNS+++ + EG L+ L
Sbjct: 484 GDTCSIASSSGVSSSSGTTGSKRSQGMPGPIDNSNLVAEPLHKVRTLTGEGGRLKRDTPL 543
Query: 117 EEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKL-------ID 169
+ +D+ LVP +W+ L WY G LPR++I + +E++ L L + +
Sbjct: 544 VQHRDFELVPDSLWKALAHWYGGPLPLPRQVILPPGSCDVELELYPLNLSIWMHQSQAVG 603
Query: 170 SRDNSQTVI-----------------------------RLSKKASTRQLYEKVCKLRGIE 200
S + +V+ S+ A+ RQ+ E +C +
Sbjct: 604 SAASWSSVVGGYGAAALNTAGITTSPISSPRRYLAHTAAFSRLANVRQVIEFLCLRLSLR 663
Query: 201 QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP 260
E R+W + + +T+ L+ + TL D + ILLEV+ DL
Sbjct: 664 VEDVRLW---HIRDTTTLLEDENATLQDLSVIDGDKILLEVR----------NKDLTW-- 708
Query: 261 IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLA 320
P +AGG T + P G
Sbjct: 709 --PEELGALVAGG-------QTTLSAERRPTICLPP---------------------GAT 738
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS-DEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMN+ALQ + +T L YF D E+N+ NPLG G +A + +L R+L
Sbjct: 739 GLHNLGNTCFMNAALQAVSNTRPLTLYFQRDGQLCELNSVNPLGTKGMVARRYAELCREL 798
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
W+ +VAP + + + AP G QHDSQELLA+LLD LHEDLNRV +K Y E+KD
Sbjct: 799 WAGSTRSVAPLKLRYCVTKHAPHLGGGGQHDSQELLAWLLDALHEDLNRVARKQYSELKD 858
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
SGGRPDE VA E W H AR+ S+I D+F GQ KS + C C S+ FDPF L+LPLP
Sbjct: 859 SGGRPDEVVAEEAWVQHLARDHSIITDLFYGQLKSKVTCQTCGHESVRFDPFNLLSLPLP 918
Query: 500 STVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNH 559
V V NG P+ + + L +L L C +K E LLLAE+
Sbjct: 919 MESYTLCEVLVVRLNGET-PIKYGLRLNSEAKYIELKQQLERLCNIKT-ERLLLAELAYS 976
Query: 560 QI 561
QI
Sbjct: 977 QI 978
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S + L + ++ +K E I L +CL AF +EE L + +
Sbjct: 1212 IAIDWDPTALHLRYQSNREKLWIEDESVSRCQKLHTEPIDLDNCLKAFTSEERL--ETKY 1269
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
+C C++ + ATKKL +W LP +L+ HLKRF K VNFP + D + Y+ S
Sbjct: 1270 HCSNCQDKQPATKKLQIWRLPPILIIHLKRFDCVNNKWVKTQKVVNFPFKDFDPTAYLAS 1329
Query: 845 KDGESYVYDL 854
E+ + L
Sbjct: 1330 VPQETILRHL 1339
>gi|359319712|ref|XP_003639152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Canis
lupus familiaris]
Length = 1276
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 191/649 (29%), Positives = 274/649 (42%), Gaps = 138/649 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P+G GE
Sbjct: 51 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPVGRGTQGQGE 110
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 111 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 170
Query: 428 RV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
Q P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 171 HAVKQSGQPPVKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 222
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 223 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMET 282
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIKD----- 577
+ D+ +L L V+ FE P E I S +
Sbjct: 283 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 342
Query: 578 ---------DEHIVAY--------RFD----RKQGGKIKLEIVNRWQEKSASDYLKGSER 616
D H ++ + D R G KI L + NR G +
Sbjct: 343 NLNHLKFGLDHHRLSSTQALAKQGKTDLPPTRAGGDKIVLLVCNR--------ACTGQQG 394
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSN 675
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 395 KRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCP 436
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
V + L +E T ER + SC P H+K++++W +
Sbjct: 437 FSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETK 489
Query: 735 ELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCP 787
+ + YI D V +++ R + +L C + EE L PDD W CP
Sbjct: 490 DFLFVNTEDEYIPDAESVR-----LQRERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCP 544
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-------- 839
CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 545 HCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQ 604
Query: 840 --------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E YVYDL+A+ NH+G + GGHYTAY K
Sbjct: 605 SSWSLPSHWSPWRRPYGLGRDPEDYVYDLYAVCNHHGTMQGGHYTAYCK 653
>gi|189238385|ref|XP_001811202.1| PREDICTED: similar to ubiquitin specific protease [Tribolium
castaneum]
Length = 1533
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 249/542 (45%), Gaps = 90/542 (16%)
Query: 63 GDEPSIDNISFDSPHMNGVSSKRAE-RPGPIDNSDIIQNG-----NGSSEGDDLEVRRNL 116
GD SI + S S SKR++ PGPIDNS+++ + EG L+ L
Sbjct: 484 GDTCSIASSSGVSSSSGTTGSKRSQGMPGPIDNSNLVAEPLHKVRTLTGEGGRLKRDTPL 543
Query: 117 EEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKL-------ID 169
+ +D+ LVP +W+ L WY G LPR++I + +E++ L L + +
Sbjct: 544 VQHRDFELVPDSLWKALAHWYGGPLPLPRQVILPPGSCDVELELYPLNLSIWMHQSQAVG 603
Query: 170 SRDNSQTVI-----------------------------RLSKKASTRQLYEKVCKLRGIE 200
S + +V+ S+ A+ RQ+ E +C +
Sbjct: 604 SAASWSSVVGGYGAAALNTAGITTSPISSPRRYLAHTAAFSRLANVRQVIEFLCLRLSLR 663
Query: 201 QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVP 260
E R+W + + +T+ L+ + TL D + ILLEV+ DL
Sbjct: 664 VEDVRLW---HIRDTTTLLEDENATLQDLSVIDGDKILLEVR----------NKDLTW-- 708
Query: 261 IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLA 320
P +AGG T + P G
Sbjct: 709 --PEELGALVAGG-------QTTLSAERRPTICLPP---------------------GAT 738
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS-DEINTENPLGMHGELALAFGDLLRKL 379
GL NLGNTCFMN+ALQ + +T L YF D E+N+ NPLG G +A + +L R+L
Sbjct: 739 GLHNLGNTCFMNAALQAVSNTRPLTLYFQRDGQLCELNSVNPLGTKGMVARRYAELCREL 798
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
W+ +VAP + + + AP G QHDSQELLA+LLD LHEDLNRV +K Y E+KD
Sbjct: 799 WAGSTRSVAPLKLRYCVTKHAPHLGGGGQHDSQELLAWLLDALHEDLNRVARKQYSELKD 858
Query: 440 SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
SGGRPDE VA E W H AR+ S+I D+F GQ KS + C C S+ FDPF L+LPLP
Sbjct: 859 SGGRPDEVVAEEAWVQHLARDHSIITDLFYGQLKSKVTCQTCGHESVRFDPFNLLSLPLP 918
Query: 500 STVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNH 559
V V NG P+ + + L +L L C +K E LLLAE+
Sbjct: 919 MESYTLCEVLVVRLNGET-PIKYGLRLNSEAKYIELKQQLERLCNIKT-ERLLLAELAYS 976
Query: 560 QI 561
QI
Sbjct: 977 QI 978
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S + L + ++ +K E I L +CL AF +EE L + +
Sbjct: 1220 IAIDWDPTALHLRYQSNREKLWIEDESVSRCQKLHTEPIDLDNCLKAFTSEERL--ETKY 1277
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
+C C++ + ATKKL +W LP +L+ HLKRF K VNFP + D + Y+ S
Sbjct: 1278 HCSNCQDKQPATKKLQIWRLPPILIIHLKRFDCVNNKWVKTQKVVNFPFKDFDPTAYLAS 1337
Query: 845 KDGESYVYDL 854
E+ + L
Sbjct: 1338 VPQETILRHL 1347
>gi|238490478|ref|XP_002376476.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
gi|220696889|gb|EED53230.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
Length = 1431
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 164/271 (60%), Gaps = 17/271 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 452 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKQDLNPSNPLAHNGDVAK 511
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 512 AYANLLRMIYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 571
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 572 LKKPYIEKPDST---DEMVHDKAALTEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 628
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + VFY P+ F V + K+ K L ++
Sbjct: 629 CDKVSIIFDPFNNLTLQLP--IENLWGKEVFYFGLQKKPVRFDVEIDKNSSVKSLKELVA 686
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
E L++AE++ + +R F+N + +
Sbjct: 687 KKQGTD-PERLIMAEIFKRKFYRMFDNTSSI 716
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 136/226 (60%), Gaps = 23/226 (10%)
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
PE DE S+ + + + S ++S T ++ +Q +++PG+ + +
Sbjct: 939 PEESDETSDPADSKAAESGSASGSDADNSAEVSRTPAPVAR---VQIRPLVRPGEGL--V 993
Query: 727 LDWTDDVHELY--------DP----SYIKDLPVVHKTGFT----VKKTRQE-AISLFSCL 769
+DW +DV++ DP +D+ V+ + +++TR++ +SL CL
Sbjct: 994 VDWNEDVYDALFGGSKKDRDPLRGIPTWQDVERVNDSELNKRRQLRQTRKKRGVSLEECL 1053
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F EE L +D WYCP+CKEHR+A+KK LW PD+LV HLKRFS SR ++KLD V
Sbjct: 1054 DEFNKEEILSENDAWYCPRCKEHRRASKKFQLWRTPDILVMHLKRFSASRGFRDKLDVLV 1113
Query: 830 NFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LD+S +++ ++G+S VYDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1114 DFPVEGLDMSGRVEAPEEGKSLVYDLFAVDNHYGGLGGGHYTAYAK 1159
>gi|391865595|gb|EIT74874.1| ubiquitin carbon terminal hydrolase [Aspergillus oryzae 3.042]
Length = 1431
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 164/271 (60%), Gaps = 17/271 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 452 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKQDLNPSNPLAHNGDVAK 511
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 512 AYANLLRMIYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 571
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 572 LKKPYIEKPDST---DEMVHDKAALTEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 628
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + VFY P+ F V + K+ K L ++
Sbjct: 629 CDKVSIIFDPFNNLTLQLP--IENLWGKEVFYFGLQKKPVRFDVEIDKNSSVKSLKELVA 686
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAEL 571
E L++AE++ + +R F+N + +
Sbjct: 687 KKQGTD-PERLIMAEIFKRKFYRMFDNTSSI 716
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 23/226 (10%)
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
PE DE S+ + + + S ++S T ++ +Q +++PG+ + +
Sbjct: 939 PEESDETSDPADSKAAESGSASGSDADNSAEVSRTPAPVAR---VQIRPLVRPGEGL--V 993
Query: 727 LDWTDDVHELYDPSYIKDL-----------------PVVHKTGFTVKKTRQEAISLFSCL 769
+DW +DV++ KD P ++K + ++ +SL CL
Sbjct: 994 VDWNEDVYDALFGGSKKDRDPLRGIPTWQDVERVNDPELNKRRQLRQTRKKRGVSLEECL 1053
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F EE L +D WYCP+CKEHR+A+KK LW PD+LV HLKRFS SR ++KLD V
Sbjct: 1054 DEFNKEEILSENDAWYCPRCKEHRRASKKFQLWRTPDILVMHLKRFSASRGFRDKLDVLV 1113
Query: 830 NFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LD+S +++ ++G+S VYDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1114 DFPVEGLDMSGRVEAPEEGKSLVYDLFAVDNHYGGLGGGHYTAYAK 1159
>gi|342865976|gb|EGU71977.1| hypothetical protein FOXB_17538 [Fusarium oxysporum Fo5176]
Length = 1647
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 172/283 (60%), Gaps = 10/283 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G G+ GLQNLGNTC+MNSALQC+ +L +YFL +Y DE+N N LG +G++A+
Sbjct: 605 KPGRSIGVVGLQNLGNTCYMNSALQCVRSVEELTKYFLTNEYLDEVNKTNLLGYNGKVAI 664
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G+LL+++++ GR +V PR FK + R FSGY Q DSQE L FLLD L EDL+RVK
Sbjct: 665 TYGNLLKEIYTEGRGSVTPRDFKNTIGRCRSTFSGYGQQDSQEFLGFLLDALQEDLSRVK 724
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 725 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITRLRDDSVIADLFTGLYKSTLKCPECGKI 784
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLP+P V V + + +P+ F V L KH + L LS
Sbjct: 785 SITFDPFNNLTLPIP--VEDVWMAKVKFLPLNDVPVMFEVELPKHSAIEQLKQFLSARTG 842
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ + E L+ E Y + F+ ++N ++ I ++ + D
Sbjct: 843 VPV-ERLIGGEEYKDRFFKIYDNNLDVSEEIAKNDLATFHELD 884
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 117/195 (60%), Gaps = 25/195 (12%)
Query: 704 RISSCKP-IQKDSILKPGKHIK----VLLDWTDDVHE---------LYD----PSYIKDL 745
+ +S KP Q ++ G I+ +++DW +D E L D P++I DL
Sbjct: 1182 KAASVKPQPQPPAVADGGPLIRLGEGIVVDWNEDAWEKVFGGAAKILADEQGAPTFI-DL 1240
Query: 746 PVVHKTGFTVKKTRQE-----AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLD 800
+ + + R+ ISL CLD F E L DMWYCP+CKEHR+A+KK D
Sbjct: 1241 ETLTDPALKIAQRRRHHRRTRGISLEECLDEFERAEVLSEQDMWYCPRCKEHRRASKKFD 1300
Query: 801 LWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISN 859
LW PD+LV HLKRFS S + ++KLD V+FPI LDL S+ ++ +DG+ +YDL A+ +
Sbjct: 1301 LWKSPDILVAHLKRFSNSGWRRDKLDVMVDFPIEGLDLTSRVIQKEDGKDEIYDLIAVDD 1360
Query: 860 HYGGLGGGHYTAYAK 874
HYGGLGGGHYTAYAK
Sbjct: 1361 HYGGLGGGHYTAYAK 1375
>gi|50292819|ref|XP_448842.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528155|emb|CAG61812.1| unnamed protein product [Candida glabrata]
Length = 1147
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 190/370 (51%), Gaps = 38/370 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTC+MNS LQCLVH P L YF G Y EIN +NPLG +G +A AFG+L+
Sbjct: 287 GIVGLSNLGNTCYMNSGLQCLVHIPKLRDYFFYGGYEQEINLDNPLGYNGTVATAFGNLI 346
Query: 377 RKLWS-----SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ L+S + +P FK L + F+GY Q DSQE LAFLLD LHEDLNR+
Sbjct: 347 QNLYSYHWNQQQYQSYSPNRFKMTLGQANSMFAGYMQQDSQEFLAFLLDSLHEDLNRIHD 406
Query: 432 KPYIE---MKDSGGRPDE----EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
KPYIE ++ S DE ++A + W H ARNDS+I D+F G YKSTL CP C +
Sbjct: 407 KPYIEKPTLETSEELADENAVKQLAKKTWDAHLARNDSVINDLFVGMYKSTLKCPTCKNI 466
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDP+ LTLPLP + V +F P V L K DL ++T
Sbjct: 467 SITFDPYNDLTLPLPISTVWNKKVKIFPQKSP--PCILEVELPKSATYNDLKDYVATYS- 523
Query: 545 LKIDEGLLLA-EVYNHQIFRFFENP---------AELISSIKDDEHIVAYRFDRKQGGKI 594
ID L E++NHQ +R FE+P ELIS D I+ Y G I
Sbjct: 524 -NIDSSSLFGCEIFNHQFYRNFESPISDSNYLPVQELISETDD---IIFYEIIINPGDII 579
Query: 595 KLEIVNRWQEKSASDYLKGSERKLFGAP-LVTYLEEEHLSGADIDIAVSKLLSPLRRTYS 653
I R +E S LFG P VT +EE + I + KL + L Y
Sbjct: 580 LPVINTRIEEGFNS-------PSLFGVPFFVTVSDEERRNPFLIYQKLEKLYTNLSGGYI 632
Query: 654 SAKAHGGKEN 663
+ EN
Sbjct: 633 QLRETLNNEN 642
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 88/133 (66%), Gaps = 5/133 (3%)
Query: 749 HKTGFTVKKTRQEA----ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
+K +K R A I+L SCL F E LG +D WYCP+CKEHRQATK+L+LW
Sbjct: 827 NKELLLAQKQRNSASPNIITLDSCLKLFSKPEVLGINDSWYCPKCKEHRQATKQLELWNT 886
Query: 805 PDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNHYGG 863
P++L+ HLKRF R +K+D V+FPI LD++ Y + S + +YDLFA+ NHYGG
Sbjct: 887 PEILLIHLKRFENQRSFSDKIDAVVDFPIEGLDMTPYVVDSVVEDGCIYDLFAVDNHYGG 946
Query: 864 LGGGHYTAYAKVN 876
LGGGHYT+Y K N
Sbjct: 947 LGGGHYTSYVKNN 959
>gi|242783696|ref|XP_002480238.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720385|gb|EED19804.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1638
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 271/572 (47%), Gaps = 100/572 (17%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSDII + + S D + +R L+ +D+ +VPQ W+ + WY +
Sbjct: 366 GPVDNSDIILDTDPSQIFQDERGEPFVPLRPGLQMNEDFEIVPQAAWDLIMKWYGLAEQS 425
Query: 141 PALPR--KMISEGIVNEKRVEV---FXLCLKLIDS---------RDNSQTVIRL--SKKA 184
PA+ R SEG + E+ KL S RD S ++ S++
Sbjct: 426 PAIVRYAHNTSEGDATNIQYEISPPIYTVHKLPGSAGGMSHHTLRDKSAPPVKFLASRQT 485
Query: 185 STRQLYEKVCKLRGIEQE-KARIWDYFN--------------KQRSTSP----------- 218
+ ++ +K +L I+ K R+W + RS SP
Sbjct: 486 NFQKWLKKAKELAHIDMATKVRVWRILDGLSSTQTSGVITPAHSRSNSPAPGATLVANAG 545
Query: 219 ----LDVSD-QTLDDAMLQMDQDILLEVQVD--NGIS-MDSTG-NDLALVPIE------- 262
LDV+ +L D ++ +D + + NG S +D G D A+V +E
Sbjct: 546 NSLVLDVNTFSSLSDTHRELIEDAKDQTNNEKYNGNSTVDHFGLGDNAVVVLEEQIGGPG 605
Query: 263 -------PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKK-G 314
SRS+L P + + +S +T + + KK G
Sbjct: 606 GGEWVSDASRSTLNRLAIPGANRAGANKVKSKAITTTSGRTTPVS-----EPIRGRKKDG 660
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
G G NLGNTC+M SALQC+ +L YFL D Y ++N NPL +G++A A+
Sbjct: 661 RPKGNTGFTNLGNTCYMASALQCVRSVEELTLYFLNDYYKKDLNPSNPLSHNGDVAKAYA 720
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
+LL ++ A+ +P+ FK + R+ P FSGY Q DSQE + FLLDGL EDLNR+++KP
Sbjct: 721 NLLHAVYDESPASFSPKHFKHTIGRYGPAFSGYGQQDSQEFVLFLLDGLQEDLNRIQKKP 780
Query: 434 YIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
YIE DS DE V A+ CW+ +KARNDS+I D+F G YKSTL CPVC KV
Sbjct: 781 YIEKPDST---DEMVHDAVALKGFADRCWEIYKARNDSVITDLFAGMYKSTLHCPVCDKV 837
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILALSTA 542
SI FDPF LTL LP + T +F+ P+ V + K+ K L ++A T
Sbjct: 838 SIIFDPFNNLTLQLP--IENLWTKDIFFFPLHKPPVLIDVEIDKNASIKALKELVAQKTG 895
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISS 574
+ L++AE+Y + +R F+N + S
Sbjct: 896 TD---PQKLVMAEIYKSKFYRLFDNTGTIADS 924
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R++ +SL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS S
Sbjct: 1288 RKKGLSLDQCLDEFGREEILSENDAWYCPRCKEHRRASKKFELWKTPDILVIHLKRFSAS 1347
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K+D V+FPI LDL+ + S + ES +YDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1348 RGFRDKIDELVDFPIEGLDLNGRVASAEPDESLIYDLFAVDNHYGGLGGGHYTAYAK 1404
>gi|221481696|gb|EEE20072.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 1171
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 134/186 (72%), Gaps = 3/186 (1%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDL 375
GG+ GL NLGNTCF+NSA+QCL L+ YFL G + +IN EN +G G LA A+
Sbjct: 352 GGICGLSNLGNTCFLNSAVQCLSKVLPLSYYFLSGKFVADINEENVMGTQGRLARAYHAT 411
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
LR +W G +++APR K + R +F GYNQ DSQEL+AFLLDGLHEDLNR+K+KPY
Sbjct: 412 LRDMWFGGESSLAPRDLKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYY 471
Query: 436 EMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
E K GG +PD +VA W+ HK NDS+IVD+FQGQY+S L CP C KVS+TFDPFMY
Sbjct: 472 ESKIEGGPEKPDAQVAELSWQRHKEINDSVIVDLFQGQYRSRLECPACRKVSVTFDPFMY 531
Query: 494 LTLPLP 499
L+LP+P
Sbjct: 532 LSLPVP 537
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYS 818
Q + + CL F +E L ++MWYC CKEH QA KKLDLW +P +L+ HLKRF +
Sbjct: 968 QPSTDISDCLRLFSEQERLDVENMWYCSSCKEHVQAYKKLDLWKMPKILILHLKRFHNIG 1027
Query: 819 RYLKNKLDTFVNFPILN---LDLSKY--------MKSKD-GESYVYDLFAISNHYGGLGG 866
R+ ++K+ T V FP LD++ Y M +KD G + +Y+L A++ H G LGG
Sbjct: 1028 RFTRSKIGTKVTFPYKAGDYLDMTPYILPESLEMMHAKDQGLAPLYELVAVNVHSGELGG 1087
Query: 867 GHYTAYAKV 875
GHY AYAK+
Sbjct: 1088 GHYFAYAKL 1096
>gi|83768610|dbj|BAE58747.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1168
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 162/267 (60%), Gaps = 17/267 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 415 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKQDLNPSNPLAHNGDVAK 474
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 475 AYANLLRMIYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 534
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 535 LKKPYIEKPDST---DEMVHDKAALTEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 591
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + VFY P+ F V + K+ K L ++
Sbjct: 592 CDKVSIIFDPFNNLTLQLP--IENLWGKEVFYFGLQKKPVRFDVEIDKNSSVKSLKELVA 649
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFEN 567
E L++AE++ + +R F+N
Sbjct: 650 KKQGTD-PERLIMAEIFKRKFYRMFDN 675
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 23/226 (10%)
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
PE DE S+ + + + S ++S T ++ +Q +++PG+ + +
Sbjct: 902 PEESDETSDPADSKAAESGSASGSDADNSAEVSRTPAPVAR---VQIRPLVRPGEGL--V 956
Query: 727 LDWTDDVHELYDPSYIKDL-----------------PVVHKTGFTVKKTRQEAISLFSCL 769
+DW +DV++ KD P ++K + ++ +SL CL
Sbjct: 957 VDWNEDVYDALFGGSKKDRDPLRGIPTWQDVERVNDPELNKRRQLRQTRKKRGVSLEECL 1016
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F EE L +D WYCP+CKEHR+A+KK LW PD+LV HLKRFS SR ++KLD V
Sbjct: 1017 DEFNKEEILSENDAWYCPRCKEHRRASKKFQLWRTPDILVMHLKRFSASRGFRDKLDVLV 1076
Query: 830 NFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LD+S +++ ++G+S VYDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1077 DFPVEGLDMSGRVEAPEEGKSLVYDLFAVDNHYGGLGGGHYTAYAK 1122
>gi|429863441|gb|ELA37892.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1628
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 170/275 (61%), Gaps = 10/275 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQC+ +L +YFL G+Y EIN N LG G++A+
Sbjct: 576 KPGRGLGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTGEYEKEINKANALGYKGQVAM 635
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G+LL+++++ R AV+PR FK + R F G+ Q D+QE L FLLD L EDL+R+K
Sbjct: 636 AYGNLLKEIYAESRGAVSPRDFKNTVGRARSTFQGWGQQDTQEFLGFLLDALQEDLSRIK 695
Query: 431 QKPYIEMKDSGGR--PDE----EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS DE ++A E W + R+DS++ D+F G YKSTL CPVC K+
Sbjct: 696 KKPYIEKPDSTDEMIGDEAAIRKMAEEVWDITRKRDDSVVADLFTGLYKSTLKCPVCDKI 755
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP + TV N + P+ V L KH + L A+S
Sbjct: 756 SITFDPFSNLTLPLPVEDMWSRTVKFLPLNDA--PVQIEVELSKHSAIEGLKKAISDKTG 813
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDE 579
+ + E LL AE + + F+ +++ +++ I+ ++
Sbjct: 814 VPV-ELLLGAEEFKGKFFKVYDDSSDVSDEIQSND 847
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 103/168 (61%), Gaps = 19/168 (11%)
Query: 725 VLLDWTDDVHELY-----------------DPSYIKDLPVVHKTGFTVKKTRQEAISLFS 767
+++DWT++ ++ +P ++D + K + + +Q I+L
Sbjct: 1189 IIVDWTEESWDMVFGKEDRDDDTRGQRTFVEPEKLEDQALEQKRKTRMARKKQ-GITLEE 1247
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CLD F E L DMWYCP+CKEHR+A+KK DLW PD+L+ HLKRFS S + ++KLD
Sbjct: 1248 CLDEFEKAEVLSEQDMWYCPRCKEHRRASKKFDLWKTPDILIVHLKRFSSSGWRRDKLDV 1307
Query: 828 FVNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LDL K + ++ G+ +YDL A+ +H+GGLGGGHYTAY +
Sbjct: 1308 LVDFPIEGLDLHKRVLCQETGKEEIYDLIAVDDHFGGLGGGHYTAYGR 1355
>gi|237832289|ref|XP_002365442.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|211963106|gb|EEA98301.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
Length = 1100
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 149/240 (62%), Gaps = 6/240 (2%)
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
P +A H+ RF P S+F ++ N + GG+ GL
Sbjct: 301 PESPQFALADKEGEGEKHSGVRRFFPGPEGLPSSSFREV---RGPENIDEMFASGGICGL 357
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCF+NSA+QCL L+ YFL G + +IN EN +G G LA A+ LR +W
Sbjct: 358 SNLGNTCFLNSAVQCLSKVLPLSYYFLSGKFVADINEENVMGTQGRLARAYHATLRDMWF 417
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
G +++APR K + R +F GYNQ DSQEL+AFLLDGLHEDLNR+K+KPY E K G
Sbjct: 418 GGESSLAPRDLKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYYESKIEG 477
Query: 442 G--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
G +PD +VA W+ HK NDS+IVD+FQGQY+S L CP C KVS+TFDPFMYL+LP+P
Sbjct: 478 GPEKPDAQVAELSWQRHKEINDSVIVDLFQGQYRSRLECPACRKVSVTFDPFMYLSLPVP 537
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYS 818
Q + + CL F +E L ++MWYC CKEH QA KKLDLW +P +L+ HLKRF +
Sbjct: 968 QPSTDISDCLRLFSEQERLDVENMWYCSSCKEHVQAYKKLDLWKMPKILILHLKRFHNIG 1027
Query: 819 RYLKNKLDTFVNFPILN---LDLSKY--------MKSKD-GESYVYDLFAISNHYGGLGG 866
R+ ++K+ T V FP LD++ Y M +KD G + +Y+L A++ H G LGG
Sbjct: 1028 RFTRSKIGTKVTFPYKAGDYLDMTPYILPESLEMMHAKDQGLAPLYELVAVNVHSGELGG 1087
Query: 867 GHYTAYAKVNA 877
GHY AYAK+
Sbjct: 1088 GHYFAYAKLRG 1098
>gi|221502235|gb|EEE27973.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
VEG]
Length = 1100
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 149/240 (62%), Gaps = 6/240 (2%)
Query: 263 PSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGL 322
P +A H+ RF P S+F ++ N + GG+ GL
Sbjct: 301 PESPQFALADKEGEGEKHSGVRRFFPGPEGLPSSSFREV---RGPENIDEMFASGGICGL 357
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWS 381
NLGNTCF+NSA+QCL L+ YFL G + +IN EN +G G LA A+ LR +W
Sbjct: 358 SNLGNTCFLNSAVQCLSKVLPLSYYFLSGKFVADINEENVMGTQGRLARAYHATLRDMWF 417
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG 441
G +++APR K + R +F GYNQ DSQEL+AFLLDGLHEDLNR+K+KPY E K G
Sbjct: 418 GGESSLAPRDLKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYYESKIEG 477
Query: 442 G--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
G +PD +VA W+ HK NDS+IVD+FQGQY+S L CP C KVS+TFDPFMYL+LP+P
Sbjct: 478 GPEKPDAQVAELSWQRHKEINDSVIVDLFQGQYRSRLECPACRKVSVTFDPFMYLSLPVP 537
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYS 818
Q + + CL F +E L ++MWYC CKEH QA KKLDLW +P +L+ HLKRF +
Sbjct: 968 QPSTDISDCLRLFSEQERLDVENMWYCSSCKEHVQAYKKLDLWKMPKILILHLKRFHNIG 1027
Query: 819 RYLKNKLDTFVNFPILN---LDLSKY--------MKSKD-GESYVYDLFAISNHYGGLGG 866
R+ ++K+ T V FP LD++ Y M +KD G + +Y+L A++ H G LGG
Sbjct: 1028 RFTRSKIGTKVTFPYKAGDYLDMTPYILPESLEMMHAKDQGLAPLYELVAVNVHSGELGG 1087
Query: 867 GHYTAYAKVNA 877
GHY AYAK+
Sbjct: 1088 GHYFAYAKLRG 1098
>gi|327304122|ref|XP_003236753.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
gi|326462095|gb|EGD87548.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
Length = 1568
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 174/288 (60%), Gaps = 18/288 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +G++A
Sbjct: 500 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPNNPLSHNGDVAK 559
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 560 AYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 619
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 620 QKKPYIEKPDST---DEMVHDKVALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPE 676
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P + + + F + P+ V + K+ K + ++
Sbjct: 677 CDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDIDKNSGIKAVKQFIA 734
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYRFD 587
+ D L++AE+Y H+ ++ F++ + I + + I Y D
Sbjct: 735 KKMNVNADR-LVMAEIYKHKFYKLFDHSQSIADHQISEGDTIAMYELD 781
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 117/198 (59%), Gaps = 33/198 (16%)
Query: 706 SSCKPIQKD-SILKPGKHIKVLLDWTDDVH--------ELY------------------- 737
++ KP+Q+ +KPG I +LDW ++ + ELY
Sbjct: 1098 AAKKPVQRRLPYVKPGDVI--VLDWNEETYDGVFGDEDELYGDHDNGGGDGGLRGRPTWT 1155
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
+ S + D V K +K ++ I+L CLD F EE L +D WYCP+CKEHR+A+K
Sbjct: 1156 NVSDVVDPEVTSKRQLRSRK-KKRGITLDECLDEFGREEILSENDAWYCPRCKEHRRASK 1214
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFA 856
K +LW PD+LV HLKRFS +R ++K+D V+FP L LD+S + ++GES VYDL A
Sbjct: 1215 KFELWKAPDILVMHLKRFSANRIFRDKIDAVVDFP-LELDMSGRVQMVEEGESMVYDLIA 1273
Query: 857 ISNHYGGLGGGHYTAYAK 874
+ NHYGGLGGGHYTAYA+
Sbjct: 1274 VDNHYGGLGGGHYTAYAR 1291
>gi|226286902|gb|EEH42415.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
brasiliensis Pb18]
Length = 1516
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 182/585 (31%), Positives = 267/585 (45%), Gaps = 122/585 (20%)
Query: 90 GPIDNSDIIQNGNGSSEGDD------LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGG 140
GP+DNSD++ + S D + +R L+ G+D+ ++P+ WE + WY +
Sbjct: 215 GPVDNSDLVLVTDPSLSYKDEAGELFVPLRPGLQIGEDFEVLPEDAWEMIMKWYGLSRDS 274
Query: 141 PALPR------KMISEGIVNEKRVEVFXLCLKLID--------SRDNSQTVIRL--SKKA 184
PA+ R +E + E +F + LKL + ++D ++ ++ S+
Sbjct: 275 PAIVRFAHDTATGTTENVQYELNPPIFTI-LKLPNPSQSQAQIAQDKARAPVKTLASRHT 333
Query: 185 STRQLYEKVCKLRGIEQE-KARIWDYFN--------------KQRSTSP----------- 218
+Q V L IE K R+W RSTSP
Sbjct: 334 PFQQWLRNVKSLASIEMSTKVRVWRILEGLNSTATSGIITPAASRSTSPAPGATLTANAG 393
Query: 219 ---------------------LDVSDQTLDD----------AMLQMDQDILLEVQVDNGI 247
L++ DQT + A L D I+LE QV
Sbjct: 394 NSLVLDVNKFVALVEGSQRELLEMKDQTANPKYNGSLTLHLAGLGGDDVIVLEEQVGGPG 453
Query: 248 S----MDSTG---NDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMD 300
D G N L++ I+ + A PA S G +
Sbjct: 454 GGEWVADCAGKNTNHLSVSAIKAGSQNKAKAKAPATS-------------GRASSPAVGP 500
Query: 301 MDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
+ G + +G + GL NLGN+C+MNSALQC+ +L QYFL D Y ++N
Sbjct: 501 VTRGRQRKDGRSRG----VTGLSNLGNSCYMNSALQCVRSVEELTQYFLQDEYRKDLNPG 556
Query: 360 NPLGMHGELALAFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPL G +A A+ +LL +L+ +G ++ APR FK + R+ P FSGY Q DSQE + FL
Sbjct: 557 NPLSHDGNVAKAYANLLHQLFDENGTSSFAPRQFKQTIGRYGPSFSGYGQQDSQEFVLFL 616
Query: 419 LDGLHEDLNRVKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQY 472
LDGL EDLNR+++KPYIE DS + A +CW +KARNDS+I D+F G Y
Sbjct: 617 LDGLQEDLNRIQKKPYIEKPDSTDDMVNDNAALQRFARKCWDIYKARNDSVITDLFAGMY 676
Query: 473 KSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCC 532
KST+VCPVC KVSI FDPF LTL LP + + +F+ P+ V + K+
Sbjct: 677 KSTVVCPVCDKVSIIFDPFSNLTLQLP--IENLWSKELFFFPLYSRPVRLDVDIDKNSSV 734
Query: 533 KDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKD 577
K L + + + L++AE+Y + ++ F+N SSI D
Sbjct: 735 KALKEYVGEKVNVDTNR-LVMAEIYKQKFYKMFDN----TSSIAD 774
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ +SL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS +
Sbjct: 1163 KKRGVSLDECLDEFGKEEILSENDAWYCPRCKEHRRASKKFELWKCPDILVMHLKRFSAN 1222
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K+D V+FP LD++ + ++G+S Y+L A+ NHYGGLGGGHYTA+AK
Sbjct: 1223 RGFRDKIDALVDFP-HELDMTGRVQMPEEGKSLQYELIAVDNHYGGLGGGHYTAFAK 1278
>gi|317145396|ref|XP_001820749.2| ubiquitin carboxyl-terminal hydrolase [Aspergillus oryzae RIB40]
Length = 1791
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 162/267 (60%), Gaps = 17/267 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 812 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKQDLNPSNPLAHNGDVAK 871
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 872 AYANLLRMIYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 931
Query: 430 KQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
+KPYIE DS DE E A++CW +KARNDS+I D+F G YKSTLVCP
Sbjct: 932 LKKPYIEKPDST---DEMVHDKAALTEFADKCWDIYKARNDSVITDLFAGMYKSTLVCPA 988
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + VFY P+ F V + K+ K L ++
Sbjct: 989 CDKVSIIFDPFNNLTLQLP--IENLWGKEVFYFGLQKKPVRFDVEIDKNSSVKSLKELVA 1046
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFEN 567
E L++AE++ + +R F+N
Sbjct: 1047 KKQGTD-PERLIMAEIFKRKFYRMFDN 1072
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 23/226 (10%)
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVL 726
PE DE S+ + + + S ++S T ++ +Q +++PG+ + +
Sbjct: 1299 PEESDETSDPADSKAAESGSASGSDADNSAEVSRTPAPVAR---VQIRPLVRPGEGL--V 1353
Query: 727 LDWTDDVHELYDPSYIKDL-----------------PVVHKTGFTVKKTRQEAISLFSCL 769
+DW +DV++ KD P ++K + ++ +SL CL
Sbjct: 1354 VDWNEDVYDALFGGSKKDRDPLRGIPTWQDVERVNDPELNKRRQLRQTRKKRGVSLEECL 1413
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F EE L +D WYCP+CKEHR+A+KK LW PD+LV HLKRFS SR ++KLD V
Sbjct: 1414 DEFNKEEILSENDAWYCPRCKEHRRASKKFQLWRTPDILVMHLKRFSASRGFRDKLDVLV 1473
Query: 830 NFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LD+S +++ ++G+S VYDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1474 DFPVEGLDMSGRVEAPEEGKSLVYDLFAVDNHYGGLGGGHYTAYAK 1519
>gi|302502294|ref|XP_003013138.1| ubiquitin C-terminal hydrolase, putative [Arthroderma benhamiae CBS
112371]
gi|291176700|gb|EFE32498.1| ubiquitin C-terminal hydrolase, putative [Arthroderma benhamiae CBS
112371]
Length = 1700
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 174/288 (60%), Gaps = 18/288 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +G++A
Sbjct: 645 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPNNPLSHNGDVAK 704
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 705 AYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 764
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 765 QKKPYIEKPDST---DEMVHDKVALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPE 821
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P + + + F + P+ V + K+ K + ++
Sbjct: 822 CDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDIDKNSGIKAVKQFIA 879
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYRFD 587
+ D L++AE+Y H+ ++ F++ + I + + I Y D
Sbjct: 880 KKMNVNADR-LVMAEIYKHKFYKLFDHSQSIADHQISEGDTIAMYELD 926
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 117/194 (60%), Gaps = 32/194 (16%)
Query: 709 KPIQKD-SILKPGKHIKVLLDWTDDVH--------ELYD-------------PSY----- 741
KP+Q+ +KPG I +LDW ++ + ELY P++
Sbjct: 1259 KPVQRRLPYVKPGDVI--VLDWNEETYDGVFGDEDELYGDNDEGGDGGLRGRPTWTNVSD 1316
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
+ D V K +K R+ I+L CLD F EE L +D WYCP+CKEHR+A+KK +L
Sbjct: 1317 VVDPEVTSKRQLRSRKKRR-GITLDECLDEFGREEILSENDAWYCPRCKEHRRASKKFEL 1375
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNH 860
W PD+LV HLKRFS +R ++K+D V+FP L LD+S ++ ++GES VYDL A+ NH
Sbjct: 1376 WKAPDILVMHLKRFSANRIFRDKIDAVVDFP-LELDMSGRVQMVEEGESMVYDLIAVDNH 1434
Query: 861 YGGLGGGHYTAYAK 874
YGGLGGGHYTAYA+
Sbjct: 1435 YGGLGGGHYTAYAR 1448
>gi|321467443|gb|EFX78433.1| hypothetical protein DAPPUDRAFT_225412 [Daphnia pulex]
Length = 1555
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 148/231 (64%), Gaps = 9/231 (3%)
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
D Y A EKG GL NLGNTCFMN++LQC+ +T L QYF + E+N +NPLGM
Sbjct: 663 DKYRQALPSEKGA-TGLNNLGNTCFMNASLQCVSNTQALTQYFTSSMHLLELNRDNPLGM 721
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
G +A +GDL+R +W +AP + + ++AP+F+GY QHD+QELLAFLLDGLHE
Sbjct: 722 KGNIAKDYGDLIRDIWKGRSRTIAPLRLRWTIGKYAPRFNGYQQHDAQELLAFLLDGLHE 781
Query: 425 DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
DLNRV KPY+E+ DS GRPD VA E W+NH RN S++V++F GQ KS + C VC +
Sbjct: 782 DLNRVHDKPYVELSDSEGRPDIVVAQEAWENHLLRNRSIVVELFHGQLKSKVTCGVCQRE 841
Query: 485 SITFDPFMYLTLPLP-------STVTRTMTVTVFYANGSGLPMPFTVTLMK 528
S+ FDPF YL+LPLP V + +V G LPM T L+K
Sbjct: 842 SVRFDPFNYLSLPLPLESYVHVEVVVVRLDGSVPVKYGLRLPMDATYLLLK 892
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATK 797
DPS K VH+ + E +SL CL AF EE L D+ +YCP+C H+ ATK
Sbjct: 1255 DPSVAK---AVHQ--------QTEPVSLEQCLQAFTREEQLSGDEKYYCPKCATHQPATK 1303
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYV 851
KL +W LP +L+ HLKRF + + K V FP NLD ++++ + E+ V
Sbjct: 1304 KLQIWRLPPILIVHLKRFQFVNHRWIKSHKAVQFPHNNLDFTEFLAAIPSETLV 1357
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
P + EE +++Q+ L+ + + G ++LIS+ W++ W YV + SI ++ +
Sbjct: 371 PASRIEEGKLIQNWLRREVKRGYRVGEFWYLISSIWWKQWSDYVTNQDESIKSVPSSASL 430
Query: 78 MNGVSSKRAE-----RPGPIDNSDIIQNGNGSSE---GDDLEVRRNLEEGQDYVLVPQQV 129
N S ++ RP IDN+ ++ + G+ +RR+LE+ +DY +VP+ +
Sbjct: 431 KNNSSDSGSDLNTVVRPRAIDNTCLVATSTIKATVLTGEGGRLRRDLEKAKDYEVVPEAI 490
Query: 130 WEKLFCWYKGGPALPRKMI 148
W+ L WY G PALPR+ +
Sbjct: 491 WKALSSWYGGSPALPRQAV 509
>gi|121716260|ref|XP_001275739.1| ubiquitin carboxyl-terminal hydrolase, putative [Aspergillus
clavatus NRRL 1]
gi|119403896|gb|EAW14313.1| ubiquitin carboxyl-terminal hydrolase, putative [Aspergillus
clavatus NRRL 1]
Length = 1480
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 199/379 (52%), Gaps = 57/379 (15%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G GL NLGNTC+MNSALQC+ +L YFL D Y ++N NPL +G++A
Sbjct: 458 KDGKPRGCTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAK 517
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LLR ++ +G+++ APR K + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 518 AYANLLRMIYDEAGQSSFAPRQLKHTIGRYGPAFSGYGQQDSQEFLLFLLDGLQEDLNRI 577
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A +CW+ +KARNDS+I D+F G YKSTL+CP
Sbjct: 578 QKKPYIEKPDST---DEMVHNKDALRDFATKCWEIYKARNDSVITDLFAGMYKSTLICPT 634
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL LP + + +FY P+ V + K+ K AL
Sbjct: 635 CEKVSIIFDPFNNLTLQLP--IENLWSKEIFYFPRHRKPVIIDVEIDKNSSIK----ALK 688
Query: 541 TACCLKI---DEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR----------- 585
K+ + L++AE+Y + ++ F+N + SI + + I +
Sbjct: 689 ELVAKKMGSDPQRLVMAEIYKFKFYKMFDNNTSIAEYSIGEGDDIAIFELESVPTNYNPD 748
Query: 586 -------------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTY 626
FD + ++ + + NR + S+ + +R LFGAP
Sbjct: 749 KTQKSFYSYGRSDYEQIPSFDSPKADRMLVPVFNRVC-RPKSNNSRNMQRSLFGAPSYVV 807
Query: 627 LEEEHLSGADIDIAVSKLL 645
+ E D D + K+L
Sbjct: 808 INRED--AQDYDAILRKIL 824
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 118/179 (65%), Gaps = 24/179 (13%)
Query: 716 ILKPGKHIKVLLDWTDDVHE-------------LYDPSY-----IKDLPVVHKTGFTVKK 757
+++PG+ I +LDW + H+ L P++ I D + + +++
Sbjct: 1030 LIRPGEGI--VLDWNERAHDALFGWDKKKPDSGLGRPTWTDIERIPDPELAERR--KLRQ 1085
Query: 758 TRQE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
TR++ ++L+ CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HLKRFS
Sbjct: 1086 TRKKRGVTLYECLDEFNKEEILSENDAWYCPRCKEHRRASKKFELWKTPDILVMHLKRFS 1145
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
SR ++KLD V+FP+ LD+S +++ ++G+S +YDLFA+ NHYGGLGGGHYTAYAK
Sbjct: 1146 ASRGFRDKLDVLVDFPVEGLDMSGRVEAPEEGKSLIYDLFAVDNHYGGLGGGHYTAYAK 1204
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAE-RPGPIDNSDII 98
LKE +L+S W ++ S H + V AE GP+DN+D++
Sbjct: 128 LKEKQKGYLLSMSWLSRV-------------LARSSTHADKVDKSAAEGEIGPVDNTDLV 174
Query: 99 QNGNGSSEG--DD-----LEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
+ +S G D+ + +R L+ G+D+ +VPQ+ W+ + WY
Sbjct: 175 LVTDPASTGFKDEAGEPFVPLRPGLQIGEDFEIVPQEGWDLIMQWY 220
>gi|145533913|ref|XP_001452701.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420400|emb|CAK85304.1| unnamed protein product [Paramecium tetraurelia]
Length = 1035
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 273/559 (48%), Gaps = 69/559 (12%)
Query: 5 DSSVLMMENGGSCLPCTPDEERQIVQDLKNQ-------SDLDLK------EGNLYFLIST 51
++ + +++N S L C +Q DLK Q S+L+ K +G +LI T
Sbjct: 112 EALLYLIDNLDSMLAC-----KQKSIDLKEQLETYERLSELEKKTKYFEHDGMPAYLIPT 166
Query: 52 RWYRSWERYVCGDEPSIDNISFDSP-------HMNGVSS-----KRAERPGPIDNSDIIQ 99
RW+ W+ YV + N + + ++ VSS ++ PGPI+ +IQ
Sbjct: 167 RWFNKWKSYVTDTPIELPNENLNMEKEVEALENLFNVSSDLDIEEQINAPGPINGFSLIQ 226
Query: 100 NGN-------GSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGI 152
+ G + ++ N+ EG D++LV +++E Y GG + R ++
Sbjct: 227 AQSALELDPFGPKSYTNYILKENIREGADFILVGHKIFEYFKNIY-GGFEIKRVIVEHSQ 285
Query: 153 VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTR---QLYEKVCKLRGIEQEKARIWDY 209
++K V++ ++ I + + RL S+ L +KV ++ + E R W
Sbjct: 286 THQKYVDLVPRMIQFIILPNEEKHRSRLITANSSDLVLDLCKKVSRVLKLNNE-VRWWK- 343
Query: 210 FNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRS-SL 268
FN +S + + Q+ +L + + + I+ T +DL + + R +
Sbjct: 344 FNDFQSQEDF-IKKLQKRELYKQVSAKVLEKTMMIDEINF--TSSDLFICEVRYGRDWQI 400
Query: 269 TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNT 328
+ LS SF M++ D N ++KG + GLQNLGNT
Sbjct: 401 SEIDKKKLS---------------SFKRK-MNVSDVPKIMNDSRKG----VTGLQNLGNT 440
Query: 329 CFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAV 387
CFMN+ALQCL +T +L +Y + ++ +N +NPLG G LA A+ +L++ +W +AV
Sbjct: 441 CFMNAALQCLSNTYELTEYMVSNEFYQHLNCDNPLGTKGVLATAYAELMKIMWYGNNSAV 500
Query: 388 APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEE 447
+ K + +FAPQF GY Q DS E L++LLDGLHEDLNRV KP++ + D E
Sbjct: 501 SAYDLKRVIGKFAPQFYGYGQQDSHEFLSYLLDGLHEDLNRVLNKPFVSEVEITDETDFE 560
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
+ W N+ RN S I + GQYKSTLVCP C +VS TFDP+M L+LP+PS ++
Sbjct: 561 ASRIFWNNYILRNQSKIQQLMVGQYKSTLVCPYCHRVSKTFDPYMSLSLPIPSYTLIQLS 620
Query: 508 VTVFYANGSGLPMPFTVTL 526
+ Y NG +P+ + L
Sbjct: 621 LYFIYQNGK-IPLKIQLNL 638
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 17/134 (12%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ +L CL +F EE LG + WYC +CK+H QATK+++++ P +L+ HLKRF
Sbjct: 858 RQLRKGEYTLEDCLRSFAKEEILGKGNEWYCNKCKQHVQATKQMEIYRAPQLLIVHLKRF 917
Query: 816 --------SYSRYL----KNKLDTFVNFPILNLDLSKYMKSK----DGESYVYDLFAISN 859
+Y + K+ T V+FP NL+L+ ++ SK D Y Y+L+ + N
Sbjct: 918 RSGNNRISNYGGFFYSGGSQKITTMVHFP-KNLNLNPFVLSKVNDNDRIDYNYELYGVDN 976
Query: 860 HYGGLGGGHYTAYA 873
H+GGLGGGHYTA A
Sbjct: 977 HFGGLGGGHYTACA 990
>gi|46125069|ref|XP_387088.1| hypothetical protein FG06912.1 [Gibberella zeae PH-1]
Length = 1618
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 167/283 (59%), Gaps = 10/283 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GLQNLGNTC+MNSALQC+ +L +YFL D + DE+N NPLG +G++A
Sbjct: 586 KSGRSIGVVGLQNLGNTCYMNSALQCVRSVEELTKYFLTDEFVDEVNKTNPLGYNGKVAT 645
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G LL++++S R +V PR FK + R FSGY Q DSQE L FLLD L EDL+RVK
Sbjct: 646 TYGHLLKEIYSENRGSVTPRDFKNTIGRCRSTFSGYGQQDSQEFLGFLLDALQEDLSRVK 705
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 706 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITRCRDDSVIADLFTGLYKSTLKCPECGKI 765
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLP+P V T + + + P+ V L KH + L +S
Sbjct: 766 SITFDPFNNLTLPIP--VEDVWTAKIKFLPLNDAPVMIEVELPKHSAIEQLKQFISIRTG 823
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ E L+ E Y + F+ +EN ++ I + + D
Sbjct: 824 IP-PERLIGGEEYKDRFFKIYENTNDVSEEINKSDVATFHELD 865
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 116/194 (59%), Gaps = 24/194 (12%)
Query: 704 RISSCKP-IQKDSILKPGKHIKV----LLDWTDDV------------HELYDPSYIKDLP 746
+ +S KP Q ++ G I++ ++DW D+ E P+Y+ L
Sbjct: 1172 KAASVKPQPQPPAVADGGPLIRLGEGLVVDWNDEAWEKAFGGSSKTSEEQGAPTYLT-LE 1230
Query: 747 VVHKTGFTV-----KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
++ T + K R + I+L CLD F E L DMWYCP+CKEHR+A+KK DL
Sbjct: 1231 TLNDTALKIVQRRRKHRRTQGITLDECLDEFERAEVLSEQDMWYCPRCKEHRRASKKFDL 1290
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNH 860
W PD+LV HLKRFS S Y ++KLD V+FPI LDL S+ ++ +DG+ +YDL A+ +H
Sbjct: 1291 WKSPDILVAHLKRFSSSGYRRDKLDVMVDFPIEGLDLTSRVIQKEDGKDEIYDLIAVDDH 1350
Query: 861 YGGLGGGHYTAYAK 874
YGGLGGGHYTAYAK
Sbjct: 1351 YGGLGGGHYTAYAK 1364
>gi|401625179|gb|EJS43200.1| ubp12p [Saccharomyces arboricola H-6]
Length = 1259
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 227/495 (45%), Gaps = 64/495 (12%)
Query: 170 SRDNSQTVIRLSKKASTRQLYEKVCKL-------RGIEQEKARIWDYFNKQRSTSPLDVS 222
S+D+S + LS R L EK L I +IW F Q S P D S
Sbjct: 234 SQDDSVLYLSLSALNLVRDLIEKSMNLFFERADHLDINSVDFKIW--FVSQGSEFPTDSS 291
Query: 223 DQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTT 282
+A +M LE+ + + + N L + PS L I P + H
Sbjct: 292 VNNFLNASYEMTPLQFLELPIKKLLVPEMFENRLDKITSNPS--DLVIEVKPIEGDYHWA 349
Query: 283 GYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTP 342
Y +YN K G G GL NLGN+C+MNSALQCLVH P
Sbjct: 350 S--------------------NYFAYN--KLGPASGTTGLVNLGNSCYMNSALQCLVHVP 387
Query: 343 DLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGK 395
L YFL + Y EIN ENPLG HG +A AF +L++KL+ + A P FK
Sbjct: 388 QLRDYFLYNGYEKEINEENPLGYHGYVAKAFSNLVQKLFQNKLSTMQRNGAFPPTMFKST 447
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEV 448
+ F FSGY Q DSQE LAFLLD LHEDLNR+ +K YIE D +++
Sbjct: 448 VGHFNSMFSGYMQQDSQEFLAFLLDSLHEDLNRIMKKEYIEKPSLSADDDVNDWNVIKKL 507
Query: 449 ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTV 508
A+E W+ H RN S+I D+F G YKSTL CP C +SITFDP+ +TLPLP + TV
Sbjct: 508 ASETWEMHLKRNCSIITDLFVGMYKSTLYCPECKNISITFDPYNDVTLPLPVNTVWSKTV 567
Query: 509 TVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP 568
+F N P+ V L K DL + L + L EV+++QI+ +E+
Sbjct: 568 KIFPMNSP--PLLLEVELSKSSMYMDLKEYVGKISGLDPN-TLFGCEVFSNQIYVNYEST 624
Query: 569 AE------LISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAP 622
L IK + +V Y I + +VN EK + + LFG P
Sbjct: 625 ESNAQFLTLQELIKPADDVVFYELPVTDNNDIIVPVVNTRIEKGYRNAM------LFGVP 678
Query: 623 LVTYL--EEEHLSGA 635
L EE H GA
Sbjct: 679 FFITLTKEETHNPGA 693
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 731 DDVHELYDPSYIKDLPVVHKTGFTVKKT--RQEAISLFSCLDAFLTEEPLGPDDMWYCPQ 788
D +H +P+ LP +++T ++ I+L CL F E LG +D WYCP
Sbjct: 936 DKIHNWENPAA---LPNTELENAKLERTNVKERTITLDDCLQLFSKPEILGLNDSWYCPT 992
Query: 789 CKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDG- 847
CKEHRQATK++ LW PD+L+ HLKRF R +K+D VNFPI NLDLSK+ KD
Sbjct: 993 CKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITNLDLSKHTVYKDDL 1052
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1053 RGSIYDLYAVDNHYGGLGGGHYTAYVK 1079
>gi|363756064|ref|XP_003648248.1| hypothetical protein Ecym_8140 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891448|gb|AET41431.1| Hypothetical protein Ecym_8140 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1264
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 190/349 (54%), Gaps = 37/349 (10%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G GL NLGNTC+MNSALQCLVH P+ YFL + Y EIN +NPLG G +A AFG L
Sbjct: 346 NGTVGLGNLGNTCYMNSALQCLVHIPEFKDYFLYNAYEKEINVDNPLGHKGHIAWAFGTL 405
Query: 376 LRKLWSSGR---AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
++ L+ ++ +PR FK + F+GY Q DSQE LAFLLDGLHEDLNR+ K
Sbjct: 406 IQSLFGKRNNLISSYSPRHFKTTIGHLNSMFAGYQQQDSQEFLAFLLDGLHEDLNRIVDK 465
Query: 433 PYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
PY+E + D +++A++ W HK RNDS+I+D+F G YKSTL+CP C KVS
Sbjct: 466 PYVEKPELNPTDDVTEFETIKKLADDTWLKHKLRNDSVILDLFVGLYKSTLICPTCKKVS 525
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCL 545
TFDP+ LTLPLP T + V +F S P F V L K D L A C
Sbjct: 526 TTFDPYNDLTLPLPVDSTWSNKVLIF--PHSSPPYTFEVELNKTDTYCD--LKKYVARCT 581
Query: 546 KIDEG-LLLAEVYNHQIFRFFENPA---------ELISSIKDDEHIVAYRFDRKQGGKIK 595
++ LL AEV+NHQ + +E ELIS D + +V Y R + +
Sbjct: 582 GMNTADLLGAEVFNHQFYNNYEASRADSQYLPIHELIS---DSDVVVFYEVPRSENDLV- 637
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKL 644
+ ++N E D + + KL G P L EE S D + + KL
Sbjct: 638 VPVMNTVIE----DGFRSA--KLCGFPFFISLSEEEQS--DYGVILQKL 678
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F T E LG D WYCP CKEHRQATK+++LW PD+L+ HLKRF
Sbjct: 933 EEKKITLHDCLTLFSTPEVLGATDSWYCPSCKEHRQATKQIELWNTPDILLIHLKRFENQ 992
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+ V+FPI +LD+S Y+ KD + +YDL A+ NHYGGLGGGHYTAY K
Sbjct: 993 RSFSDKIGDIVHFPITDLDMSPYLVYKDDKKGTIYDLIAVDNHYGGLGGGHYTAYVK 1049
>gi|195435576|ref|XP_002065756.1| GK19705 [Drosophila willistoni]
gi|194161841|gb|EDW76742.1| GK19705 [Drosophila willistoni]
Length = 1771
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 216/403 (53%), Gaps = 35/403 (8%)
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
S+ A+ RQ+ + +C+ ++ E R+W + L+ +L + +++ + +LL
Sbjct: 633 FSRLATVRQVADFLCEHLRLKAEDIRLWHVPPLENLPILLEEDTMSLKELVIRDNDQLLL 692
Query: 240 EVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFM 299
E++ + + G+ + ++S +AGGPA T S+ M
Sbjct: 693 EIRNKDLTWPEELGS------LATAQSGQGVAGGPADRRRLTR-------------SSIM 733
Query: 300 DMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
+ G GL NLGNTCFMN+ALQ L +T LAQYF + E+N
Sbjct: 734 SV-------------HAAGATGLHNLGNTCFMNAALQVLFNTQPLAQYFQRQMHRFELNQ 780
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
N LG G+LA+ + +LL+++W++ +VAP + + + APQF+G QHDSQELL +L
Sbjct: 781 TNKLGTRGQLAMRYSELLKEVWTATTRSVAPLKLRFCVNKHAPQFAGGGQHDSQELLEWL 840
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LD LHEDLNRV +KPY E+KDS GRPD+ VA E W H ARN S+I+D+F GQ KS + C
Sbjct: 841 LDALHEDLNRVTEKPYSELKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSC 900
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
C S+ FDPF L+LPLP + V V +GS +P+ + + L DL
Sbjct: 901 LGCGHESVRFDPFSLLSLPLPVENYVYLEVLVILLDGS-VPIKYGLRLNSECKYIDLKQK 959
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
L+T C L+ +L+ E++N QI + + +L + D ++
Sbjct: 960 LATLCALQ-PSLMLVCELWNSQIRQVLNDEEKLRTQSAKDLYV 1001
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 1439 IAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL---EQW 1495
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 1496 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPAPYLA 1555
Query: 844 SKDGESYV 851
S E+ +
Sbjct: 1556 SVPQETIL 1563
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 46/182 (25%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYV---------CG---------DEPSIDNISF 73
L+ + + G ++LIS WY +W +Y C DE + + SF
Sbjct: 390 LRREERRPYRVGQFWYLISRDWYLNWMQYTQHMSHTCDYCKRTVSQRSTVDEALVCDESF 449
Query: 74 DSPHMN---------------------GVSSKRAERPGPIDNSDIIQNG------NGSSE 106
++ + + + RPGPIDN ++I + E
Sbjct: 450 NTHSLEQHDSYSLGSGSGSGSGSASSGISAGRHCARPGPIDNGNLITTNPYRNVRTLTGE 509
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLK 166
G L+ L + D+ LVP+ +W+ L WY LPR++I + + +E +E++ L L+
Sbjct: 510 GGHLKRDTPLVQSHDFELVPKSLWKALNRWYGDNLPLPRQVI-QPVNSEVELELYPLNLR 568
Query: 167 LI 168
++
Sbjct: 569 IL 570
>gi|326483733|gb|EGE07743.1| hypothetical protein TEQG_06726 [Trichophyton equinum CBS 127.97]
Length = 1917
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 174/288 (60%), Gaps = 18/288 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +G++A
Sbjct: 831 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPNNPLSHNGDVAK 890
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 891 AYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 950
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 951 QKKPYIEKPDST---DEMVHDKAALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPE 1007
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P + + + F + P+ V + K+ K + ++
Sbjct: 1008 CDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDIDKNSGIKAVKQFIA 1065
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYRFD 587
+ D L++AE+Y H+ ++ F++ + I + + I Y D
Sbjct: 1066 KKMNVNADR-LVMAEIYKHKFYKLFDHSQSIADHQISEGDTIAMYELD 1112
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 100/147 (68%), Gaps = 10/147 (6%)
Query: 729 WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQ 788
WT+ V ++ DP V K +K ++ I+L CLD F EE L +D WYCP+
Sbjct: 1495 WTN-VSDVVDPE------VTSKRQLRSRK-KKRGITLDECLDEFGREEILSENDAWYCPR 1546
Query: 789 CKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDG 847
CKEHR+A+KK +LW PD+LV HLKRFS +R ++K+D V+FP L LD+S ++ ++G
Sbjct: 1547 CKEHRRASKKFELWKAPDILVMHLKRFSANRIFRDKIDAVVDFP-LELDMSGRVQMVEEG 1605
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAK 874
ES VYDL A+ NHYGGLGGGHYTAYA+
Sbjct: 1606 ESMVYDLIAVDNHYGGLGGGHYTAYAR 1632
>gi|302653241|ref|XP_003018450.1| ubiquitin C-terminal hydrolase, putative [Trichophyton verrucosum HKI
0517]
gi|291182096|gb|EFE37805.1| ubiquitin C-terminal hydrolase, putative [Trichophyton verrucosum HKI
0517]
Length = 1916
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 201/373 (53%), Gaps = 49/373 (13%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +G++A
Sbjct: 824 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPNNPLSHNGDVAK 883
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 884 AYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 943
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 944 QKKPYIEKPDST---DEMVHDKVALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPE 1000
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P + + + F + P+ V + K+ K + ++
Sbjct: 1001 CDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDIDKNSGIKAVKQFIA 1058
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYR-------------- 585
+ D L++AE+Y H+ ++ F++ + I + + I Y
Sbjct: 1059 KKMNVNADR-LVMAEIYKHKFYKLFDHSQSIADHQISEGDTIAMYELESVPTSYNPEKPR 1117
Query: 586 ------------FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLS 633
F+ + ++ + I NR + + L +R LFG P+ + E
Sbjct: 1118 RFRFSSEEPAVGFNSPKADRMLVPIYNRGRVRRGYGQL---QRGLFGVPMYVVISREE-- 1172
Query: 634 GADIDIAVSKLLS 646
D D + ++L+
Sbjct: 1173 AYDYDAVLRQILA 1185
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 32/204 (15%)
Query: 699 SLTDERISSCKPIQKD-SILKPGKHIKVLLDWTDDVH--------ELYD----------- 738
S + ++ ++ KP+Q+ +KPG I +LDW ++ + ELY
Sbjct: 1430 SSSSKQKAAKKPVQRRLPYVKPGDVI--VLDWNEETYDGVFGDEDELYGDNDEGGDGGLR 1487
Query: 739 --PSY-----IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
P++ + D V K +K R+ I+L CLD F EE L +D WYCP+CKE
Sbjct: 1488 GRPTWTNVSDVVDPEVTSKRQLRSRKKRR-GITLDECLDEFGREEILSENDAWYCPRCKE 1546
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESY 850
HR+A+KK +LW PD+LV HLKRFS +R ++K+D V+FP L LD+S + ++GES
Sbjct: 1547 HRRASKKFELWKAPDILVMHLKRFSANRIFRDKIDAVVDFP-LELDMSGRVQMVEEGESM 1605
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
VYDL A+ NHYGGLGGGHYTAYA+
Sbjct: 1606 VYDLIAVDNHYGGLGGGHYTAYAR 1629
>gi|440639022|gb|ELR08941.1| hypothetical protein GMDG_03608 [Geomyces destructans 20631-21]
Length = 1523
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/285 (44%), Positives = 170/285 (59%), Gaps = 17/285 (5%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD-EINTENPLGMHGELALAF 372
G+ G GL NLGNTC+MNSALQC+ +L +YFL D ++ E+NTENPLG G +AL +
Sbjct: 439 GKTVGTVGLANLGNTCYMNSALQCIRSVEELTKYFLADEAEKELNTENPLGKGGNVALVY 498
Query: 373 GDLLRKLWSSGR-AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LLR+L+ +++ PR FK R+ FSGY Q DSQE L LLD L EDLNRVK+
Sbjct: 499 NALLRELYKEPPPSSITPRQFKNTFGRYFGSFSGYGQQDSQEFLGILLDALQEDLNRVKK 558
Query: 432 KPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
KPYIE DS DE V A E W K R+DS+I D+F G YKSTLVCP C+
Sbjct: 559 KPYIEKPDST---DEMVDNPAALKKMAKEVWDITKRRDDSVIGDLFTGMYKSTLVCPDCA 615
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVSITFDPF +T+ LP + T VF+ + P+ V + K G K L +S+
Sbjct: 616 KVSITFDPFSTVTMQLP--IESTWGHEVFFFPLNDKPVRVAVDMDKQGSIKGLKTFVSSR 673
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ + E L +AE +N+QI+R E+ + I+ ++ I+ + +
Sbjct: 674 VGVAV-ERLFIAEEFNNQIYRILEDTKSVSEDIQANDRIMVFELE 717
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
PV+ + + R + + L CLD F EE L D WYCP+CKEHR+A+KKL+LW P
Sbjct: 1089 PVLEAKRKSRLRRRSKGLFLDECLDEFGKEEILSEMDTWYCPRCKEHRRASKKLELWRTP 1148
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGL 864
D++VFHLKRFS + ++KLD V FPI LD+S + ++ +DG+ +YDLFA+ NHYG L
Sbjct: 1149 DIMVFHLKRFSSTAMRRDKLDIQVTFPIDGLDMSTRVLEREDGKKDIYDLFAVDNHYGSL 1208
Query: 865 GGGHYTAYAK 874
GGGHYTAYAK
Sbjct: 1209 GGGHYTAYAK 1218
>gi|50304791|ref|XP_452351.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641484|emb|CAH01202.1| KLLA0C03476p [Kluyveromyces lactis]
Length = 1252
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 186/334 (55%), Gaps = 26/334 (7%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ GL NLGNTC+MNSALQCL+H P+L +YFL Y EIN NPLG G++A
Sbjct: 331 KLNAPSGIMGLSNLGNTCYMNSALQCLLHIPELNEYFLYKGYEREININNPLGHKGDVAH 390
Query: 371 AFGDLLRKLW--SSGRAAV-APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
AFG LL L+ S G++ APR FK + + F+GY Q DSQE LAFLLDGLHEDLN
Sbjct: 391 AFGHLLYSLFAPSYGQSTFYAPRNFKNTIGHYNSLFAGYGQQDSQEFLAFLLDGLHEDLN 450
Query: 428 RVKQKPYI---EMKDSGGRPDEE----VANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
RV +KPY+ E + G D + +A W K RNDS+I+D+F G YKSTLVCP
Sbjct: 451 RVIEKPYVNKPEFPNDGQIDDTDQIVLLAANMWDYIKKRNDSVIMDLFVGLYKSTLVCPN 510
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C+ VSITFDP+ LTLPLP + VT+F N P V L K DL ++
Sbjct: 511 CNHVSITFDPYNDLTLPLPIENYWSTKVTIFPQNSP--PCTLEVELSKTSSYNDLKAYVA 568
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAE-----LISSIKDDEHIVAYRFDRKQGGKIK 595
+ ++ L+ AE++NHQ + +E+ E + I + + ++ Y R Q +
Sbjct: 569 QHANMHAND-LIGAEIFNHQFYNNYESNVEADYLPISELISESDTVIFYEVHRGQDDLVV 627
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
+ R++E + +LFG P L +
Sbjct: 628 PILNTRFEEGFKTP-------RLFGYPFFIALSQ 654
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
T +T + +I+L SCL F E LG D WYCP CK+H QA+K+++LW PD+L+ HLK
Sbjct: 893 TRAQTEKSSITLDSCLRLFSQPEILGSADSWYCPNCKQHTQASKQIELWNTPDILLIHLK 952
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMK-SKDGESYVYDLFAISNHYGGLGGGHYTAY 872
RF R +K+D V FPI LD+S Y+ K+GE+ VYDL A+ NHYGGLGGGHYTAY
Sbjct: 953 RFENQRSFSDKIDATVKFPIEGLDMSPYLSYKKEGENDVYDLIAVDNHYGGLGGGHYTAY 1012
Query: 873 AK 874
+
Sbjct: 1013 CR 1014
>gi|385303118|gb|EIF47212.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis
AWRI1499]
Length = 1196
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 239/477 (50%), Gaps = 45/477 (9%)
Query: 122 YVLVPQQVWEKLFCWY---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVI 178
+ VP++++EKL WY G + R++ + V+ + LC+ B+ +
Sbjct: 138 FQFVPKELFEKLRSWYGWKDGDXVVERRVFYDRSKGRLDVDAWPLCIIPHILTGBAAGIN 197
Query: 179 R----------LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDD 228
R +S ++S++ L V K G+ + + R + +T +D D
Sbjct: 198 RYKLVSAKPFLISSRSSSKHLKIMVEKSFGLLKHRNR--HSLSXSTNTESEGENDDXRSD 255
Query: 229 AMLQMDQDILLEVQVDNGISMDS--TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRF 286
A + I +++ +G + + L L+ + + GG +L H +
Sbjct: 256 AAKHIKSRIW-HIKIKSGXRIPPVLSPGFLNLITEQQVIRTGKKYGGKSLEECHMSSGHV 314
Query: 287 NQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQ 346
+ GS MD + + + G+ G GL NLGNTC+MNSALQC+ H P+L
Sbjct: 315 LLEIKRADGSYLMDTN------ASVRVGD--GKVGLVNLGNTCYMNSALQCIAHVPELTY 366
Query: 347 YFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW---------SSGRAAVAPRAFKGKL 396
YFL G Y EIN ENPLG G+LA A+ L+R L+ S R + +PR F+ +
Sbjct: 367 YFLYGFYKKEINRENPLGKKGKLAEAYASLIRHLFDKRMLNNXGSGYRESFSPRDFRYTI 426
Query: 397 ARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE---MKDSGGRPDEEV---AN 450
F FS Y Q DSQE L FLLDGLHEDLNRV +KPYIE + + EEV A+
Sbjct: 427 GVFNSMFSDYRQQDSQEFLTFLLDGLHEDLNRVLKKPYIEKPELPEGKFENKEEVCKLAD 486
Query: 451 ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTV 510
+CW HK RNDS+I+D+F GQYKSTL+CP C S+TFDP+ LTLPLP +TR T +
Sbjct: 487 DCWIAHKRRNDSVIIDLFVGQYKSTLICPECQHXSLTFDPYNDLTLPLP--ITRKWTHKL 544
Query: 511 FYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN 567
G P V L + DL +S ++E L+ EV+ Q+++ +E+
Sbjct: 545 KILPEXGXPYLXEVELPRSATFYDLKAYVSKMTTFPMNE-LICIEVFQSQVYKNYED 600
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CL F E LG +D+WYCP C++H+QATKK+++W +PDVL HLKRF SR
Sbjct: 1001 TITLDDCLQLFSRPEILGENDLWYCPHCQKHQQATKKIEIWSVPDVLAIHLKRFESSRSF 1060
Query: 822 KNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V FPI LD+SKY+ S K ++ VYDL A+ NH+GG+GGGHYTAY +
Sbjct: 1061 SDKIDATVEFPIEGLDMSKYVASEKTHQAMVYDLCAVDNHFGGIGGGHYTAYVR 1114
>gi|367027774|ref|XP_003663171.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
gi|347010440|gb|AEO57926.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
Length = 1536
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/284 (43%), Positives = 170/284 (59%), Gaps = 11/284 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQC+ +L +YFL + EIN +NPL +GE+A
Sbjct: 413 KPGRTLGCVGLQNLGNTCYMNSALQCVRSVEELTKYFLTHEAQKEINPDNPLSHNGEVAA 472
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+G LL +++ ++APR FK + R+A FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 473 AYGRLLEEIYRDPAPGSIAPRHFKAVIGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRI 532
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS P+ E+A + W K R+DS+I D+F G YKSTLVCPVC K
Sbjct: 533 KKKPYIEKPDSTDDMINNPEAVREMAAKVWDITKKRDDSVIADLFTGMYKSTLVCPVCDK 592
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDPF LTLPLP + +V F N +P+ V L K+ + L ++
Sbjct: 593 VSITFDPFNNLTLPLPVANVWSRSVKFFPLN--DVPVEIVVDLDKNSSIRALKQYIAVRV 650
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ E L E ++ + F+F+++ + + I+ + V + +
Sbjct: 651 GVPA-ERLFAGEEFHSKFFKFYDDGSAVSDEIQSSDVAVVHEIE 693
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 97/141 (68%), Gaps = 7/141 (4%)
Query: 740 SYIKDLPVVHKTGFTVK-KTRQ----EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
+Y+K +P + G K K RQ I+L CLD F EE L D WYCP+CKEHR+
Sbjct: 1070 TYLK-VPTLEDPGLQAKQKARQLRKKHGIALDDCLDEFEKEEILSEQDTWYCPRCKEHRR 1128
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYD 853
A+KK DLW PD+L+ HLKRFS S + ++KLD V+FP+ LDL+K + +K +G+ V+D
Sbjct: 1129 ASKKFDLWKTPDILIVHLKRFSSSGWRRDKLDILVDFPVEGLDLTKRVINKEEGKEEVFD 1188
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L A+ +H+GGLGGGHYTA+AK
Sbjct: 1189 LIAVDDHWGGLGGGHYTAFAK 1209
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
+KEG+ +L+S +W + C D+ H + SS + PGP+DNSDIIQ
Sbjct: 83 VKEGDEAYLVSRKWLAKAQ--AC---------RSDAKHASKESSDGS--PGPVDNSDIIQ 129
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
S G+ + +D+ L P+ W+ L WY
Sbjct: 130 AIFTDSTGERCVKLKPGTGIEDFELFPKDAWDLLLSWY 167
>gi|326471808|gb|EGD95817.1| ubiquitin C-terminal hydrolase [Trichophyton tonsurans CBS 112818]
Length = 1862
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 174/288 (60%), Gaps = 18/288 (6%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +L+ YFL G+Y ++N NPL +G++A
Sbjct: 793 KDGKARGVTGLSNLGNTCYMNSALQCVRSVEELSHYFLMGEYKKDLNPNNPLSHNGDVAK 852
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +LL +++ G A+ APR FK + R+ P FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 853 AYANLLHQIFDVQGSASFAPRNFKVTIGRYGPSFSGYGQQDSQEFLLFLLDGLQEDLNRI 912
Query: 430 KQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKST+VCP
Sbjct: 913 QKKPYIEKPDST---DEMVHDKAALQRFADRCWEIYKARNDSVITDLFSGMYKSTVVCPE 969
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVSI FDPF LTL +P + + + F + P+ V + K+ K + ++
Sbjct: 970 CDKVSIIFDPFNNLTLQIPIENSWSHKIMFFPLHKP--PVNIDVDIDKNSGIKAVKQFIA 1027
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYRFD 587
+ D L++AE+Y H+ ++ F++ + I + + I Y D
Sbjct: 1028 KKMNVNADR-LVMAEIYKHKFYKLFDHSQSIADHQISEGDTIAMYELD 1074
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 99/147 (67%), Gaps = 10/147 (6%)
Query: 729 WTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQ 788
WT+ V ++ DP V K +K ++ I+L CLD F EE L +D WYCP+
Sbjct: 1440 WTN-VSDVVDPE------VTSKRQLRSRK-KKRGITLDECLDEFGREEILSENDAWYCPR 1491
Query: 789 CKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-KYMKSKDG 847
CKEHR+A+KK +LW PD+LV HLKRFS +R ++K+D V+FP L LD+S + ++G
Sbjct: 1492 CKEHRRASKKFELWKAPDILVMHLKRFSANRIFRDKIDAVVDFP-LELDMSGRVQMVEEG 1550
Query: 848 ESYVYDLFAISNHYGGLGGGHYTAYAK 874
ES VYDL A+ NHYGGLGGGHYTAYA+
Sbjct: 1551 ESMVYDLIAVDNHYGGLGGGHYTAYAR 1577
>gi|408388251|gb|EKJ67937.1| hypothetical protein FPSE_11748 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 167/283 (59%), Gaps = 10/283 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GLQNLGNTC+MNSALQC+ +L +YFL D + DE+N NPLG +G++A
Sbjct: 641 KSGRSIGVVGLQNLGNTCYMNSALQCVRSVEELTKYFLTDEFVDEVNKTNPLGYNGKVAT 700
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G LL++++S R +V PR FK + R FSGY Q DSQE L FLLD L EDL+RVK
Sbjct: 701 TYGHLLKEIYSENRGSVTPRDFKNTIGRCRSTFSGYGQQDSQEFLGFLLDALQEDLSRVK 760
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 761 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITRCRDDSVIADLFTGLYKSTLKCPECGKI 820
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLP+P V T + + + P+ V L KH + L +S
Sbjct: 821 SITFDPFNNLTLPIP--VEDVWTAKIKFLPLNDAPVMIEVELPKHSAIEQLKQFISIRTG 878
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ E L+ E Y + F+ +EN ++ I + + D
Sbjct: 879 IP-PERLIGGEEYKDRFFKIYENTNDVSEEISKSDVATFHELD 920
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 19/168 (11%)
Query: 725 VLLDWTDDV------------HELYDPSYIKDLPVVHKTGFTV-----KKTRQEAISLFS 767
+++DW D+ E P+Y+ L ++ T + K R + I+L
Sbjct: 1253 LVVDWNDEAWEKAFGGSSKTSEEQGAPTYLT-LETLNDTALKIVQRRRKHRRTQGITLDE 1311
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CLD F E L DMWYCP+CKEHR+A+KK DLW PD+LV HLKRFS S Y ++KLD
Sbjct: 1312 CLDEFERAEVLSEQDMWYCPRCKEHRRASKKFDLWKSPDILVAHLKRFSSSGYRRDKLDV 1371
Query: 828 FVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LDL S+ ++ +DG+ +YDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1372 MVDFPIEGLDLTSRVIQKEDGKDEIYDLIAVDDHYGGLGGGHYTAYAK 1419
>gi|156044997|ref|XP_001589054.1| hypothetical protein SS1G_09687 [Sclerotinia sclerotiorum 1980]
gi|154694082|gb|EDN93820.1| hypothetical protein SS1G_09687 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1538
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 166/282 (58%), Gaps = 14/282 (4%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMH 365
S +K G G GL NLGNTC+MNSALQC+ +L +YFL Y E+N +NPLG
Sbjct: 450 SNRRSKNGRTPGTVGLSNLGNTCYMNSALQCVRSVEELTKYFLNASYKAELNGDNPLGHG 509
Query: 366 GELALAFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
G +A ++ DLLR ++ +V PR FK ++RFA QFSGY Q DSQE + FLLDGL E
Sbjct: 510 GAVAESYADLLRDIYKEPPPISVQPRYFKNTVSRFATQFSGYGQQDSQEFIGFLLDGLQE 569
Query: 425 DLNRVKQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
DL+RVK+KPYIE DS G P+ E+A + W K R+DS+I D+F G YKSTLVC
Sbjct: 570 DLSRVKKKPYIEKPDSTDEMIGNPEAIREMATKVWDITKQRDDSVIADLFTGMYKSTLVC 629
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C KVSITFDPF +TL LP T TV F N P+ V + KH L
Sbjct: 630 PHCDKVSITFDPFNNMTLQLPIENMWTRTVAFFPLNDR--PVSIAVEIDKHASFGTLKRW 687
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFEN---PAELISSIKD 577
+S + + E L EVY + ++++ + P E + + KD
Sbjct: 688 VSKKVGVPV-ERLFTCEVYEGKFYKWYHDHLLPTEAVENSKD 728
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 108/168 (64%), Gaps = 19/168 (11%)
Query: 725 VLLDWTDDVHEL----YD--------PSYIKDLPVVHKTGFTVKKT-----RQEAISLFS 767
+++DW DD + Y+ P+Y +LPV+H K+ +++ ++L
Sbjct: 1063 LVVDWNDDAWDTLFGAYNDKEESRGRPTYT-NLPVLHDPELVSKRKARDTRKKQGVTLED 1121
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CLD F EE L D WYCP+CKEHR+A+KK ++W PD+L+ HLKRFS S ++KLD
Sbjct: 1122 CLDEFGKEEILSEMDTWYCPRCKEHRRASKKFEIWRTPDILIMHLKRFSSSGMRRDKLDI 1181
Query: 828 FVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LDL S+ ++ +DG+ +YDL A+ +H+GG+GGGHYTA+AK
Sbjct: 1182 LVDFPIDGLDLSSRVIERQDGKEEIYDLIAVDDHWGGMGGGHYTAFAK 1229
>gi|321478620|gb|EFX89577.1| hypothetical protein DAPPUDRAFT_303219 [Daphnia pulex]
Length = 945
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 266/559 (47%), Gaps = 51/559 (9%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL------GMHGELAL 370
G+ GL+N GNTCF+N+ LQCL HT LA+YF+ D Y ++N + L G GE+
Sbjct: 181 GVIGLRNHGNTCFINAILQCLNHTDLLAEYFVTDQYQSDLNRRSRLNIRKFGGTKGEITE 240
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+LL+ LWSS K + ++ Q+ G QHD+QE L +LLD +HEDLN
Sbjct: 241 QLAELLKALWSSQYEPEMTFKLKAVIDKYGTQYRGAAQHDAQEFLLWLLDKVHEDLNTAT 300
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
+K Y ++K+S GRPDE VA E NH N S + +FQ Q++S+L CP C K S TFDP
Sbjct: 301 KKKYKKIKNSYGRPDEIVAAETMANHLRCNSSFVHQLFQAQFRSSLTCPHCHKQSSTFDP 360
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F+ ++LP+P T+ + V V Y + + + K+L LS+ + +
Sbjct: 361 FLCVSLPIPRKRTQNVYVNVVYLCQQPRQVRIGLCMNGQADVKELKEVLSSDTGIDFNR- 419
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-DRKQ-----GGKIKLEIVN---- 600
+LL E+ + R + + IS +++ + + D K+ G + L +N
Sbjct: 420 MLLTEIDDQGFLRTHSD-NQPISVLRETDPLYCIELPDVKEPCEEDGAFLVLCWINVLVD 478
Query: 601 -RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHG 659
Q + S Y R+ L L +E S + K PL
Sbjct: 479 EHSQTRIGSCYTMQVARETSFEDLQKLLLKEMASVVHHQVICQKQEEPL----------- 527
Query: 660 GKENGFLPEVIDELSN-SHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILK 718
F VID + +E E L + + D +S C P +
Sbjct: 528 -----FNIRVIDGVCRFIDSEEGEDGPLYLDAAVDHPLYTEAVDAALSLCDPEHGTPL-- 580
Query: 719 PGKHIKVLLDWTDDVHELYDPSYIKDLPVV--HKTGFTVKKTRQE--AISLFSCLDAFLT 774
H+K++L+W D E + + D V+ H + +K T +E +++L C +
Sbjct: 581 ---HVKIVLEWDSDSKE---KAIVDDEDVIEEHSSVGQLKATNEECTSVTLEECFQLYTQ 634
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK--NKLDTFVNFP 832
E LGP++ W+CP C ++ K+L LW PD+L+ HLKRF S + +KL ++FP
Sbjct: 635 AEQLGPENAWHCPSCNRKQEVVKRLALWSSPDILIVHLKRFKQSAKQRTMSKLSVMIDFP 694
Query: 833 ILNLDLSKYMKSKDGESYV 851
+ LDL+ ++ S+ S++
Sbjct: 695 VHGLDLTNHLASRSHSSHL 713
>gi|367049500|ref|XP_003655129.1| hypothetical protein THITE_2151181 [Thielavia terrestris NRRL 8126]
gi|347002393|gb|AEO68793.1| hypothetical protein THITE_2151181 [Thielavia terrestris NRRL 8126]
Length = 1703
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 201/366 (54%), Gaps = 26/366 (7%)
Query: 231 LQMDQDILLEVQVDNGISMDS-TGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQY 289
L +DQ ++L+ Q++ + + G+ + I SS ++A A + G+T+G +
Sbjct: 532 LAVDQTLVLDEQIERDAYVSTFRGSGIKDKAIASRGSSTSLA---AQTRGNTSGRSSPAF 588
Query: 290 PGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL 349
G + K G G GLQNLGNTC+MNSALQC+ +L +YFL
Sbjct: 589 QGPQ-----------TRGRSQHKSGRTIGCVGLQNLGNTCYMNSALQCVRSVEELTKYFL 637
Query: 350 G-DYSDEINTENPLGMHGELALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYN 407
+ EIN +NPL +G++A A+G LL +++ +VAPR FKG + R+AP FSGY
Sbjct: 638 THEAHKEINPDNPLSHNGDVAAAYGRLLEEIYKDPAPLSVAPRHFKGIIGRYAPAFSGYG 697
Query: 408 QHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG----GRPD--EEVANECWKNHKARND 461
Q DSQE L FLLDGL EDLNR+K+KPYIE DS P E+A + W K R+D
Sbjct: 698 QQDSQEFLGFLLDGLQEDLNRIKKKPYIEKPDSTDDMINNPAAVREMAAKVWDITKKRDD 757
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S+I D+F G YKST+VCPVC KVSITFDPF LTLPLP + V F N + P+
Sbjct: 758 SVIADLFTGMYKSTVVCPVCDKVSITFDPFNNLTLPLPVANVWSRPVKYFPLNDA--PVM 815
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHI 581
V L K+ + L ++ + E L AE + + F+ +++ A + I+ +
Sbjct: 816 IVVDLDKNSSIRALKQFIAARVGVP-PERLFAAEEFQAKFFKLYDDGAAVSEEIQPSDVP 874
Query: 582 VAYRFD 587
V + +
Sbjct: 875 VVHELE 880
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 88/124 (70%), Gaps = 5/124 (4%)
Query: 756 KKTRQ----EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
KK RQ I+L CLD F EE L D WYCP+CKEHR+A+KK DLW PD+LV H
Sbjct: 1280 KKARQLRKKHGIALDDCLDEFEKEEILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVH 1339
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYT 870
LKRFS + + ++KLD V+FP+ LDL++ + K DG+ VYDL A+ +H+GGLGGGHYT
Sbjct: 1340 LKRFSSTGWRRDKLDILVDFPVEGLDLTRRVIDKEDGKQEVYDLIAVDDHWGGLGGGHYT 1399
Query: 871 AYAK 874
A+AK
Sbjct: 1400 AFAK 1403
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 23 DEERQIVQDL-KNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
D++ + ++ L K ++ KEG+ +L+S RW + + D+ H N
Sbjct: 251 DQQIKTIETLVKAFAETPAKEGDEAYLVSRRWLSKAQAFRS-----------DAKHANKE 299
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEG-QDYVLVPQQVWEKLFCWYKGG 140
+S+ + GP+DNSDIIQ S G L V+ G +++ L P+ W+ L WY
Sbjct: 300 ASEGSL--GPVDNSDIIQAIFTDSAG-VLCVKLKPGMGVENFELFPKDAWDLLLSWYGLA 356
Query: 141 PA 142
P
Sbjct: 357 PG 358
>gi|340959623|gb|EGS20804.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 2887
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/284 (44%), Positives = 171/284 (60%), Gaps = 11/284 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQCL +L +YFL + EIN +NPL +G++A+
Sbjct: 1754 KPGRTMGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAM 1813
Query: 371 AFGDLLRKLWSSGR-AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ A+VAPR FK + R+AP FSGY Q D+QE L FLLDGL EDLNR+
Sbjct: 1814 AYSRLLDEIYKDPTPASVAPRHFKSIIGRYAPAFSGYGQQDTQEFLGFLLDGLQEDLNRI 1873
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS P +E+A++ W K R+DS+I D+F G YKSTLVCP C K
Sbjct: 1874 KKKPYIEKPDSTDDMINNPAAIKEMADKVWDITKKRDDSVIADLFTGMYKSTLVCPQCDK 1933
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDPF LTLPLP ++ T V Y + P+ V + K+ + L +S
Sbjct: 1934 VSITFDPFNNLTLPLP--ISNVWTHKVKYYPLNDAPVEINVDMDKNSTIRALKQFISARV 1991
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ + E L E + + F+F+E+ + I+ + V + +
Sbjct: 1992 GVPV-ERLFAGEEFQSKFFKFYEDRGIVAEVIQKSDIAVVHELE 2034
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 6/137 (4%)
Query: 744 DLPVVHKTGFTVKKT-----RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
+LPV+ K+ ++ I+L CLD F +EE L +D WYCP+CKEH +ATKK
Sbjct: 2398 NLPVLDDPTLDAKRKARTERKRRGITLDDCLDEFESEEVLSENDCWYCPRCKEHVRATKK 2457
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAI 857
DLW PD+LV HLKRFS + ++KLD V+FPI LDL++ + ++ G+ Y+YDL A+
Sbjct: 2458 FDLWKTPDILVVHLKRFSSHGWRRDKLDILVDFPIEGLDLTRRVIDQEPGKQYIYDLIAV 2517
Query: 858 SNHYGGLGGGHYTAYAK 874
NHYGGLGGGHYTAYAK
Sbjct: 2518 DNHYGGLGGGHYTAYAK 2534
>gi|365760061|gb|EHN01808.1| Ubp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1104
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 190/353 (53%), Gaps = 35/353 (9%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G G GL NLGNTC+MNSALQCLVH P+L YFL + Y EIN ENPL
Sbjct: 199 NYFAYNKLEPG--SGTTGLVNLGNTCYMNSALQCLVHIPELRDYFLYNGYESEINEENPL 256
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 257 GYHGYVARAFSDLVQKLFHNKLSSMQRNAAFPPSMFKSTVGHFNSMFSGYMQQDSQEFLA 316
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDV 467
FLLD LHEDLNR+ +K YIE PD++V A++ W+ H RN S+I D+
Sbjct: 317 FLLDSLHEDLNRIIKKAYIE--KPSLSPDDDVNDWNVVKKLADDTWEMHLKRNCSVITDL 374
Query: 468 FQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLM 527
F G YKSTL CP C VSITFDP+ +TLPLP + TV +F N P+ V L
Sbjct: 375 FVGLYKSTLYCPECKNVSITFDPYNDVTLPLPVDTVWSKTVKIFPMNSP--PLLLEVELS 432
Query: 528 KHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFF---ENPAELIS---SIKDDEHI 581
K DL + L + L E++++QI+ + E+ A+ ++ IK + +
Sbjct: 433 KSSTYMDLKNYVGKTSGLDPN-TLFGCEIFSNQIYLNYEATESNAQFLTLQELIKPADDV 491
Query: 582 VAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
+ Y +I + +VN +EK + + LFG P L +E S
Sbjct: 492 IFYELPVTDNNEIIVAVVNTRKEKGYRNAM------LFGVPFFITLSKEERSN 538
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG +D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 809 KERIITLDDCLQLFSKPEILGLNDSWYCPTCKEHRQATKQIQLWNTPDILLVHLKRFESQ 868
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFP+ LDLSK++ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 869 RSFSDKIDATVNFPVTALDLSKHVVHKDDPRGSIYDLYAVDNHYGGLGGGHYTAYVK 925
>gi|406606361|emb|CCH42352.1| putative ubiquitin carboxyl-terminal hydrolase 12 [Wickerhamomyces
ciferrii]
Length = 1327
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 162/263 (61%), Gaps = 14/263 (5%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G GL NLGN+C+MNSALQCLVH P+L QYFL D + +E+N +NPLG +G++A +FG L
Sbjct: 368 NGCIGLTNLGNSCYMNSALQCLVHIPELTQYFLFDCFENELNPDNPLGFNGDIAKSFGRL 427
Query: 376 LRKLW---SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
+ L+ S +A+APR FK + R+ F GY Q DSQE A+LLDGLHEDLNR+ K
Sbjct: 428 IHLLFDKKSFRNSAIAPRDFKNIIGRYNSMFHGYLQQDSQEFFAYLLDGLHEDLNRIINK 487
Query: 433 PYIEMKD--SGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
P E + S EEV A + W HK RNDS+I+D+F G YKSTLVCP CSKVSIT
Sbjct: 488 PATEKPELNSKNATIEEVQTLAEQSWVQHKLRNDSVIIDLFVGLYKSTLVCPDCSKVSIT 547
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPM-PFTVTLMKHGCCKDLILALSTACCLK 546
FDPF LTLPLP+ + + +F G PM F V L K L ++ L
Sbjct: 548 FDPFSDLTLPLPTETFWSFKILLFLDKG---PMKSFEVELPKGASYNKLKQYVAEKLSLN 604
Query: 547 IDEGLLLAEVYNHQIFRFFENPA 569
++ L +++N Q + FE+P
Sbjct: 605 VNY-LAAMDIFNGQFYMNFEDPV 626
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
T+ E+ISL SCL F E LG +D+WYC CKEHRQA+K++ +W PD+L HLKRF+
Sbjct: 1017 TKNESISLDSCLKTFSKPEVLGEEDLWYCSDCKEHRQASKQISIWSTPDILTIHLKRFTS 1076
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKS--KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+ VNFPI D+S Y+ S E +YDLFA+ NH+GG+ GGHYT+ K
Sbjct: 1077 QRSFSDKISKVVNFPIEGFDVSPYISSPVNSNEETIYDLFAVDNHWGGISGGHYTSKVK 1135
>gi|426255195|ref|XP_004021246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Ovis aries]
Length = 1267
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 272/649 (41%), Gaps = 138/649 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 43 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 102
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 103 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 162
Query: 428 RV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
Q P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 163 HAVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 214
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 215 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRVGVAVPLSGTVARLREAVSMET 274
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIK------ 576
+ D+ +L L V+ FE P E I S +
Sbjct: 275 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 334
Query: 577 ---------DDEHIVAYRFDRKQGG-----------KIKLEIVNRWQEKSASDYLKGSER 616
D + + + KQG KI L + NR G +
Sbjct: 335 NLNHLKFGLDHYRLSSTQAAAKQGKADLPLSRAGSDKIVLLVCNR--------ACTGQQG 386
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSN 675
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 387 KRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCP 428
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
V + L +E T ER + SC P H+K++++W +
Sbjct: 429 FSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETK 481
Query: 735 ELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCP 787
+ + YI D V ++K R + +L C + EE L PDD W CP
Sbjct: 482 DFLFVNTEDEYIPDAESVR-----LQKERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCP 536
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-------- 839
CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 537 HCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDKRMKLQNMVKFPLTGLDMTPHVVKRSQ 596
Query: 840 --------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTA+ K
Sbjct: 597 SSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAFCK 645
>gi|297464214|ref|XP_002703139.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 31 [Bos taurus]
Length = 1324
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 272/649 (41%), Gaps = 138/649 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 101 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGEQGQGE 160
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 161 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 220
Query: 428 RV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
Q P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 221 HAVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 272
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 273 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRVGVAVPLSGTVARLREAVSVET 332
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIK------ 576
+ D+ +L L V+ FE P E I S +
Sbjct: 333 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 392
Query: 577 ---------DDEHIVAYRFDRKQGG-----------KIKLEIVNRWQEKSASDYLKGSER 616
D + + + KQG KI L + NR G +
Sbjct: 393 NLNHLKFGLDHCRLSSTQAAAKQGKADLPPSRAGSDKIVLLVCNR--------ACTGQQG 444
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSN 675
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 445 KRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCP 486
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
V + L +E T ER + SC P H+K++++W +
Sbjct: 487 FSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETK 539
Query: 735 ELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCP 787
+ + YI D V ++K R + +L C + EE L PDD W CP
Sbjct: 540 DFLFVNTEDEYIPDAESVR-----LQKERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCP 594
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-------- 839
CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 595 HCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDKRMKLQNMVKFPLTGLDMTPHVVKRSQ 654
Query: 840 --------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTA+ K
Sbjct: 655 SSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAFCK 703
>gi|254580861|ref|XP_002496416.1| ZYRO0C17908p [Zygosaccharomyces rouxii]
gi|186703867|emb|CAQ43553.1| Ubiquitin carboxyl-terminal hydrolase 12 [Zygosaccharomyces rouxii]
gi|238939307|emb|CAR27483.1| ZYRO0C17908p [Zygosaccharomyces rouxii]
Length = 1204
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 206/688 (29%), Positives = 303/688 (44%), Gaps = 107/688 (15%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
T + +R I+ L N++ + KEG+ ++I WY ++ D +ID
Sbjct: 32 TLENQRNIITQLVNENQENAKEGDSVYIIPQFWYANF-----FDPQTIDPTQL------- 79
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNL----EEGQDYVLVPQQVWEKLFCW 136
GPID + I ++ RN + Y+ +P+ V+ KL W
Sbjct: 80 ---------GPIDTALICRD------------YRNFILVEYDKCPYISIPEPVFVKLVNW 118
Query: 137 YKGGPALPRKMISEGIV---NEKRVEVFXLCL----KLIDSRDNSQTVIRLSKKASTRQL 189
Y G A + +S +V N + + C+ L++S + + L+K+ S
Sbjct: 119 Y--GLANDSQPVSTHLVYDENHNLITEYNQCVFRVHHLVESDQDRRHGGGLNKRVS---- 172
Query: 190 YEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISM 249
Y + +L ++Q +I D F ++ S LDVS ++ + + +++ +
Sbjct: 173 YFAISRLCTVKQLSIKILDTFFERESD--LDVSKAKFKIWFVKYSEQVGSNSILNSSFKL 230
Query: 250 DSTGNDLALVP----IEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
D +P I P T+ L+ R + FM
Sbjct: 231 DPL--QFMELPLHRRITPLLFHHTLKEVDILTGDFVVELRQYNKNYHWLSNYFM------ 282
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
YN G+ GL NLGNTC+MNSALQCLVH P+L YFL + + DEIN NPLG
Sbjct: 283 --YNQLTPS--SGITGLYNLGNTCYMNSALQCLVHIPELRDYFLYNCFEDEINCNNPLGY 338
Query: 365 HGELALAFGDLLRKLW-----SSGRA---AVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G +A AF L++ L+ SSG A +P FK + F FSGY Q DSQE +
Sbjct: 339 QGYVARAFSGLVQNLFGCKTLSSGSTLTPAYSPTGFKSTIGHFNSMFSGYMQQDSQEFIT 398
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLDGLHEDLNR+ KPYIE D + +A + WK H RNDS+I D+F
Sbjct: 399 FLLDGLHEDLNRIVDKPYIEKPSLSPEDDSNDFNVIKRLAEDTWKLHLQRNDSVITDLFV 458
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G Y+STL CP C+ VSITFDP+ LTLPLP V VF N P V + K
Sbjct: 459 GLYESTLQCPECNNVSITFDPYNDLTLPLPVNTVWHCKVKVFPQNSP--PCVLEVEMGKS 516
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENP---------AELISSIKDDEH 580
++L ++ ++ L E+++HQ + +E+P ELIS D
Sbjct: 517 STYQNLKEYVAKYANIE-PRNLYGCEIFSHQFYNNYESPESNSQFLPIQELISESDD--- 572
Query: 581 IVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE-EEHLSGADIDI 639
++ Y Q I + I+N E+ + +LFG P L EE ++ I
Sbjct: 573 VIFYEIVASQNDTI-VPILNSRIEEGFKN------PRLFGVPFFIVLSPEERVNPGAIRY 625
Query: 640 AVSKLLSPLRRTYSSAKAHGGKENGFLP 667
+ K S L + + EN LP
Sbjct: 626 KLEKYFSHLSGGFVEFPSLSEMENHSLP 653
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ ++ I+L CL F E LG +D WYCP CKEHRQATK++ LW PDVL+ HLKRF
Sbjct: 873 QQEEEKKITLHDCLKLFSKREVLGMNDSWYCPSCKEHRQATKQIQLWDTPDVLLIHLKRF 932
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D V+FPI LD+S Y+ +K D +YDL A+ NHYGGLGGGHYTAYAK
Sbjct: 933 ENLRSFSDKIDEVVHFPITGLDMSPYLVNKGDPRGTIYDLVAVDNHYGGLGGGHYTAYAK 992
>gi|297490186|ref|XP_002698069.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31, partial [Bos
taurus]
gi|296473366|tpg|DAA15481.1| TPA: ubiquitin specific peptidase 31 [Bos taurus]
Length = 1266
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 189/649 (29%), Positives = 272/649 (41%), Gaps = 138/649 (21%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 42 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGEQGQGE 101
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 102 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 161
Query: 428 RV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
Q P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 162 HAVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 213
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 214 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRVGVAVPLSGTVARLREAVSVET 273
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIK------ 576
+ D+ +L L V+ FE P E I S +
Sbjct: 274 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 333
Query: 577 ---------DDEHIVAYRFDRKQGG-----------KIKLEIVNRWQEKSASDYLKGSER 616
D + + + KQG KI L + NR G +
Sbjct: 334 NLNHLKFGLDHCRLSSTQAAAKQGKADLPPSRAGSDKIVLLVCNR--------ACTGQQG 385
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSN 675
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 386 KRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCP 427
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
V + L +E T ER + SC P H+K++++W +
Sbjct: 428 FSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETK 480
Query: 735 ELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCP 787
+ + YI D V ++K R + +L C + EE L PDD W CP
Sbjct: 481 DFLFVNTEDEYIPDAESVR-----LQKERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCP 535
Query: 788 QCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS-------- 839
CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 536 HCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDKRMKLQNMVKFPLTGLDMTPHVVKRSQ 595
Query: 840 --------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTA+ K
Sbjct: 596 SSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAFCK 644
>gi|150864435|ref|XP_001383247.2| hypothetical protein PICST_69820 [Scheffersomyces stipitis CBS
6054]
gi|149385691|gb|ABN65218.2| peptidase C19, ubiquitin C-terminal hydrolase 2 [Scheffersomyces
stipitis CBS 6054]
Length = 1340
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 206/662 (31%), Positives = 313/662 (47%), Gaps = 118/662 (17%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSS 83
E+R ++++L + S+ KEG+ ++LIST + ++ + + + S
Sbjct: 51 EKRHLIEELIHNSNTG-KEGDPWYLISTEYLNNF-------------LHLPATSFEDLQS 96
Query: 84 KRAERPGPIDNSDII-QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY--KGG 140
K GP+DN+ I+ QNG + N E + Y + P+ ++ L W+ KG
Sbjct: 97 KL----GPVDNTSIVDQNG--------ILYPENNEPVETYNVSPE-IFNYLADWFGTKGQ 143
Query: 141 PALPRKMISEGIVNEKRVEVFXLCLKLID-----------SRDNSQ--------TVIRLS 181
P R +I K VE F + +R ++ T + LS
Sbjct: 144 PVC-RCLIINPETGAKEVERFPPVFHIHQLGKRPVQNSYYTRHHNHPTHATSHPTAVSLS 202
Query: 182 KKASTRQLYE----KVCKLRGIEQEKARIW--DYFNKQRSTSPLDVSDQTLD-DAMLQMD 234
+ + L + V KL + RIW + N TS L +S+ D D +
Sbjct: 203 RTKTFTDLLDLIRVSVLKLPKRPIDNFRIWFIESKNIAEYTSTLTISNLIFDIDNKSLVH 262
Query: 235 QDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSF 294
IL + GI D+ LV ++ +++S +++P +
Sbjct: 263 SGILKDTLKSQGIKSDAFH---ILVEVKDAKAS------------------HDRFPVN-- 299
Query: 295 GSTFMDMDDGYDSYNTAKKGEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-Y 352
T+++ D + Y+ K K G GL NLGNTC+MNSALQCL+H ++ YFL + Y
Sbjct: 300 --TYLNQID-VEQYDFDKLSSKSSGHLGLSNLGNTCYMNSALQCLLHVAEVNYYFLYNLY 356
Query: 353 SDEINTENPLGMHGELALAFGDLLRKLW---SSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
E+N +NPLG HG++A AFG+LL++ + SS +++ PR FK + R++ FSGY Q
Sbjct: 357 KRELNFDNPLGNHGDIANAFGNLLKQAFDPSSSKDSSITPREFKSTIGRYSSMFSGYMQQ 416
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEV---------ANECWKNHKARN 460
DSQE L++LLD LHEDLNR+ +KPY E + DEE+ + CW HK RN
Sbjct: 417 DSQEFLSWLLDALHEDLNRIHKKPYCEKPELK---DEEINDPKAIIKLSETCWNQHKMRN 473
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGL-- 518
DS+I D+F G Y+STL+CP CSK SITFDPF LTLPLP + T T+ + G+
Sbjct: 474 DSVITDLFTGLYQSTLLCPDCSKTSITFDPFNDLTLPLPISKKWYHTFTIVDLSDGGILR 533
Query: 519 ---PMPFTVTLMKHGCCKDLILALSTACCLKIDEG-LLLAEVYNHQIFRFFE-----NPA 569
M V L K DL+ LS LK++ L L E++ + + F+ N
Sbjct: 534 GTRIMKLEVELNKTSNFDDLLTYLSD--FLKVETTHLFLYEIFRNSFYSDFQLDYNRNKF 591
Query: 570 ELISSI-KDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLE 628
IS I +D + + Y I + + N ++ S K +E FG PL L
Sbjct: 592 MPISDIVRDSDEVHVYYVPYNPETDIIIPVYNTVEDPDKS--YKVTE--TFGIPLFVTLN 647
Query: 629 EE 630
+E
Sbjct: 648 KE 649
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 88/129 (68%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
P + K +++ R+ ISL+ CL +F T E LG D+WYCP+CK+H++ATK + +W
Sbjct: 981 PELEKNRAKIERQRKSKISLYDCLKSFSTPEILGEHDLWYCPRCKDHKRATKTIQVWSTG 1040
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLG 865
D+L HLKRF +R +K++ V+FPI LD+S Y+ + + E+ +YDL A+ NHYGGLG
Sbjct: 1041 DILTIHLKRFHSARAFSDKIEMVVDFPIEGLDMSSYIANPEAENSLYDLIAVDNHYGGLG 1100
Query: 866 GGHYTAYAK 874
GGHYTA K
Sbjct: 1101 GGHYTASVK 1109
>gi|260944048|ref|XP_002616322.1| hypothetical protein CLUG_03563 [Clavispora lusitaniae ATCC 42720]
gi|238849971|gb|EEQ39435.1| hypothetical protein CLUG_03563 [Clavispora lusitaniae ATCC 42720]
Length = 1210
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 191/345 (55%), Gaps = 29/345 (8%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
S++ K GG GL NLGNTC+MNSALQCLVH P++ YF D + E+N NPLG
Sbjct: 297 SFDMNKITTTGGNLGLSNLGNTCYMNSALQCLVHVPEINFYFFYDLFEKELNRSNPLGNS 356
Query: 366 GELALAFGDLLRKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
G++A+AF +LL KL+ S ++V PR FK + R++ F GY Q DSQE L++LLD L
Sbjct: 357 GDVAVAFSNLLHKLFDYPGSSTSSVTPREFKYTIGRYSSMFHGYQQQDSQEFLSWLLDAL 416
Query: 423 HEDLNRVKQKPYIE---MKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTL 476
HEDLNR+ KPY E +KD + + A ECW HK RNDS+IVD+F G Y+STL
Sbjct: 417 HEDLNRIYDKPYCEKPELKDEDVENPQAIVDLAKECWNLHKKRNDSVIVDLFTGMYQSTL 476
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLP---MPFTVTLMKHGCCK 533
+CPVC K S+TFDPF LTLPLP T+ +GS L M V L K +
Sbjct: 477 LCPVCYKKSVTFDPFNDLTLPLPVNKKWYHEFTIVDLSGSYLDSFIMKLEVELSKSSTYE 536
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFEN--------PAELISSIKDDEHIVAYR 585
DL+ LS + D L L E++ + ++ F+ P I I DD+ I Y
Sbjct: 537 DLVAYLSKHLGVPRD-FLFLFEIFRNFFYKDFQEDNYQQSFLPINEI--IGDDDAIFVYI 593
Query: 586 FDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
+I + ++N +++ S + + FG PL L ++
Sbjct: 594 IPYTPDDRI-IPVINVAKDEDRSYDIT----EPFGIPLFIVLNKQ 633
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 15/228 (6%)
Query: 659 GGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILK 718
G E + E D +N N + +++L E S T E+ S + + D IL+
Sbjct: 808 GDDEQRSIGENTDNETNWDNLDSMFSSVDNLPPIENSKSAEGTSEKDSDPEKNEIDGILQ 867
Query: 719 PGKHIKVLLDWTDDVHELY----------DPSYIKDLPVVHKTGFTVKKTRQEAISLFSC 768
G + +++DW ++ Y + Y+ + P + + + ++ ISL+ C
Sbjct: 868 -GNEL-LVIDWKSHSYQDYFADTDKRAWENLDYVSN-PELEENKRKLAAQQRTTISLYDC 924
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
L F T E LG D+WYCP+CKEHR+ATK + +W D+L FHLKRF +R L +K++
Sbjct: 925 LRNFSTPEVLGDQDLWYCPRCKEHRRATKTIQVWSTGDILTFHLKRFQSARSLSDKINMV 984
Query: 829 VNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LD++ Y+ S + +YDL A+ NHYGGLGGGHYTA K
Sbjct: 985 VDFPIEGLDMTDYVTSSQISKQPLIYDLIAVDNHYGGLGGGHYTASVK 1032
>gi|294659797|ref|XP_462221.2| DEHA2G15598p [Debaryomyces hansenii CBS767]
gi|199434236|emb|CAG90715.2| DEHA2G15598p [Debaryomyces hansenii CBS767]
Length = 1266
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 192/346 (55%), Gaps = 29/346 (8%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
++ K E GG GL NLGNTC+MNSALQCL+H P++ YF + + E+N NPLG
Sbjct: 289 TFEIEKMIESGGNLGLANLGNTCYMNSALQCLLHVPEINYYFFYNIFEKELNKTNPLGNK 348
Query: 366 GELALAFGDLLRKLW----SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
G++A+AFG LL KL+ ++ + V+PR FK + ++ F GY Q DSQE L++LLD
Sbjct: 349 GQIAVAFGSLLHKLFDNLKNTNSSFVSPREFKFTIGHYSSMFHGYQQQDSQEFLSWLLDA 408
Query: 422 LHEDLNRVKQKPYIE---MKD---SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
LHEDLNR+ KPY E +KD S +A+ CW+ HK RNDS+IVD+F G Y+ST
Sbjct: 409 LHEDLNRIYNKPYCEKPELKDDEVSDPSAIARLADTCWQQHKQRNDSVIVDLFTGLYQST 468
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLP-----MPFTVTLMKHG 530
L+CP CSK SITFDPF LTLPLP T T+ + L M V L K
Sbjct: 469 LICPDCSKTSITFDPFNDLTLPLPINKKWYHTFTIINLSTDSLNLESHIMKLEVELDKTS 528
Query: 531 CCKDLILALSTACCLKIDEG-LLLAEVYNHQIFRFFE---NPAELISS---IKDDEHIVA 583
+L+ LST LK+ + L L E++N+ ++ F+ N + + I D + I+
Sbjct: 529 NFDELLRYLST--FLKVPQKYLFLFEIFNNFFYKDFQAKYNKLKFFPTSEIISDSDDILV 586
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
Y I + ++N ++ S + FG PL L++
Sbjct: 587 YIIPHNPETDIIVPVINTVSDQDKSYNISNP----FGLPLFIVLDK 628
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 6/137 (4%)
Query: 744 DLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKK 798
DLP + K + E +SL+ CL +F T E LG D+WYCP CK+H+QATK
Sbjct: 911 DLPYIPNDQLEANKRKLEQQQKSTVSLYDCLRSFSTPEILGDQDLWYCPNCKDHKQATKT 970
Query: 799 LDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM-KSKDGESYVYDLFAI 857
+ +W D+L HLKRF +R +K++ V+FP+ LD+S ++ K KD +YDL A+
Sbjct: 971 IQIWSTGDLLTIHLKRFQSARTFSDKINMVVDFPVEGLDMSSFVSKEKDNSDLIYDLIAV 1030
Query: 858 SNHYGGLGGGHYTAYAK 874
NHYGGLGGGHYTA K
Sbjct: 1031 DNHYGGLGGGHYTASVK 1047
>gi|326436309|gb|EGD81879.1| ubiquitin specific peptidase 11 [Salpingoeca sp. ATCC 50818]
Length = 1525
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 141/210 (67%), Gaps = 3/210 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G AGL NLGNTCF+NSA+QCLVHT L +YFL + E+N NPLG G +A +G L+
Sbjct: 889 GRAGLSNLGNTCFLNSAVQCLVHTRPLTEYFLRRQHVLELNKANPLGHQGVIASEYGRLV 948
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+LW+ G+ VAP + + +FAP F+GY QHDSQE L+FLLDGLHEDLNRV +KPY+E
Sbjct: 949 SRLWN-GKGCVAPVKLRSAVQKFAPHFAGYQQHDSQEFLSFLLDGLHEDLNRVMKKPYVE 1007
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KDS GRPD VA E W+ H RN S+IVD+FQG KS L C C S+ FDP+ +L+L
Sbjct: 1008 RKDSNGRPDRVVAREAWEGHLLRNRSVIVDMFQGLLKSRLRCQTCKTTSVAFDPYSFLSL 1067
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
PLP+ + + + +G P +++ L
Sbjct: 1068 PLPTEGRSVVEIKLHRLSGKA-PRLYSIAL 1096
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 52/236 (22%)
Query: 43 GNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERP--GPIDNSDIIQN 100
G +L++ W+ +W V IS D H++ S R + P I+N +
Sbjct: 538 GATCYLVNASWFHAWRARV--------GISRDLQHLH---SPRLDLPPCKEINNDALCVP 586
Query: 101 GNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKM--ISEGIVNEKRV 158
GN G +R +L +G DYVLV + VW L W+ GGP L R + + +G V
Sbjct: 587 GN-LRRGASTRLRPHLTQGVDYVLVSEPVWTALSHWHGGGPTLQRPVCRMQDGTVQP--- 642
Query: 159 EVFXLCLKLIDSR---------------DNSQT---------VIRLSKKASTRQLYEKVC 194
+++ L L+++ + D ++T I + + ++L + VC
Sbjct: 643 DIYPLVLRVMQHQGPGLKASILRFFGGSDPAETKAPQIAFGFAIDAFRTTTCKRLLKSVC 702
Query: 195 KL--------RGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQ 242
+ RG+ ++AR+WDY + ++ T L D TL D + +ILLE++
Sbjct: 703 HMLGTVPNGVRGVTPDQARLWDYRSPRKPTL-LTNDDATLLDLHFGNNDEILLELR 757
>gi|395846392|ref|XP_003795891.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Otolemur
garnettii]
Length = 1398
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 188/645 (29%), Positives = 272/645 (42%), Gaps = 129/645 (20%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 172 GVAGLRNHGNTCFMNATLQCLSNTDLFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 231
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 232 VTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 291
Query: 428 RV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
Q P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 292 HAVKQSGQPPLKPPSETDMIPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 343
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 344 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSVET 403
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIKD----- 577
+ D+ +L L V+ FE P E I S +
Sbjct: 404 KIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 463
Query: 578 ---------DEHIVA--YRFDRKQGG-----------KIKLEIVNRWQEKSASDYLKGSE 615
D H ++ + KQG KI L + NR G +
Sbjct: 464 NLNHLKFGLDHHRLSSPTQIAAKQGKMDLPTTRTGSDKIVLLVCNR--------ACTGQQ 515
Query: 616 RKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELS 674
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 516 GKRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCIQVC 557
Query: 675 NSHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDV 733
V + L +E T ER + SC P H+K++++W +
Sbjct: 558 PFSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKET 610
Query: 734 HE-LYDPSYIKDLPVVHKTGFTVKKTRQ-EAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
+ L+ + + +P + Q + +L C + EE L PDD W CP CK+
Sbjct: 611 KDFLFGNTEDEYIPDAESVRLQREHHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQ 670
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS------------ 839
+Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 671 LQQGSITLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWS 730
Query: 840 ----------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTAY K
Sbjct: 731 LPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCK 775
>gi|171686156|ref|XP_001908019.1| hypothetical protein [Podospora anserina S mat+]
gi|170943039|emb|CAP68692.1| unnamed protein product [Podospora anserina S mat+]
Length = 1516
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 224/411 (54%), Gaps = 49/411 (11%)
Query: 191 EKVCKLRGIEQEKARIWDYFNKQRSTSPLDVS-DQTL--DDAMLQMDQDILLEVQVDNGI 247
EK + +E + + +N +RS S + ++ DQTL D+ + + QD + NG
Sbjct: 338 EKGVQRALVEAQDTTVHANYNGKRSLSLVGLNVDQTLVLDEEVER--QDWVSTYSGSNGK 395
Query: 248 SMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
++ + + A+V +R++++ PALS T G R Q
Sbjct: 396 NLTTRNSSTAVVQ---ARANVSGRSSPALSAPLTRG-RAQQ------------------- 432
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHG 366
K G G GLQNLGNTC+MNSALQCL +L +YFL + EINT+NPL G
Sbjct: 433 ----KSGRTHGCVGLQNLGNTCYMNSALQCLRAVEELTKYFLTHEAKKEINTDNPLAHGG 488
Query: 367 ELALAFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
++AL++G LL +++ +VAPR FK + R+AP FSGY Q DSQE L +LLDGL ED
Sbjct: 489 DVALSYGRLLEEIYKDPTPNSVAPRQFKSVIGRYAPAFSGYGQQDSQEFLGWLLDGLQED 548
Query: 426 LNRVKQKPYIEMKDSGGRPDE---------EVANECWKNHKARNDSLIVDVFQGQYKSTL 476
LNR+ +KPYIE DS DE E+A + W K R+DS+I D+F G YKSTL
Sbjct: 549 LNRILRKPYIEKPDST---DEMINNPAAIREMALQVWDITKRRDDSVISDLFTGLYKSTL 605
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCP C+K+SITFDPF LTLPLP + + + + N + P+ V + K+ K L
Sbjct: 606 VCPECNKISITFDPFTNLTLPLPMANSWSREIRFYPLNDA--PVNIVVDIDKNSSIKGLK 663
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+S + +D L+ +E ++ + F+ +++ A + I ++ +V + +
Sbjct: 664 QFISQRVGVPVDR-LMASEEFSGKFFKHYDDMATVSDDISSNDIVVVHELE 713
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ I+L CL+ F EE L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS
Sbjct: 1099 KHGITLEDCLNEFEKEEILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVG 1158
Query: 820 YLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y + KLD V+FP+ LDL S+ + +DG+ +YDL A+ +H+GGLGGGHYTA AK
Sbjct: 1159 YRREKLDILVDFPVEGLDLTSRVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAKAK 1214
>gi|322698985|gb|EFY90750.1| ubiquitin carboxyl-terminal hydrolase [Metarhizium acridum CQMa
102]
Length = 1602
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 167/272 (61%), Gaps = 10/272 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G G GL NLGNTC+MNSALQC+ +L +YFL + Y EIN N LG G +A+
Sbjct: 588 RHGRSIGAVGLHNLGNTCYMNSALQCVRSVEELTKYFLTESYFTEINKTNVLGFEGRVAI 647
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G+LLR+++ GR +V+PR FK + R P FSG++Q DSQE L FLLD L EDL+R+K
Sbjct: 648 AYGNLLREVYEEGRGSVSPRDFKSTVGRCRPTFSGWSQQDSQEFLGFLLDALQEDLSRIK 707
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W R+DS+I D+F G YKSTL CP C K+
Sbjct: 708 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITCRRDDSVIADLFTGLYKSTLKCPECGKI 767
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP + +V F N +P+ V L +H + L +S
Sbjct: 768 SITFDPFNNLTLPLPLENMWSKSVKFFPLN--DVPVKIEVELSRHSSIESLKQFISVRTG 825
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIK 576
+ + E L+ AE + + F+ ++N ++ I+
Sbjct: 826 VPV-ERLMGAEEFKDRFFKIYDNTQDVSEEIQ 856
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
Query: 732 DVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
DV L+DP+ L + + T +KTR I+L CLD F E L DMWYCP+CKE
Sbjct: 1246 DVQTLHDPA----LKITQRRRVT-RKTR--GITLEECLDEFERAEILSEQDMWYCPRCKE 1298
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL-SKYMKSKDGESY 850
HR+A+KK DLW PD+LV HLKRFS S + ++KLD V+FPI LDL S+ ++ +DG++
Sbjct: 1299 HRRASKKFDLWKTPDILVAHLKRFSSSGWRRDKLDVLVDFPIEGLDLTSRVIQKEDGKAE 1358
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL + +HYGGLGGGHYTAYAK
Sbjct: 1359 IYDLIGVDDHYGGLGGGHYTAYAK 1382
>gi|322707063|gb|EFY98642.1| ubiquitin carboxyl-terminal hydrolase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1568
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 167/272 (61%), Gaps = 10/272 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G G GL NLGNTC+MNSALQC+ +L +YFL + Y EIN N LG G +A+
Sbjct: 572 RHGRSIGAVGLHNLGNTCYMNSALQCVRSVEELTKYFLTESYFTEINKTNVLGFEGRVAI 631
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G+LLR+++ GR +V+PR FK + R P FSG++Q DSQE L FLLD L EDL+R+K
Sbjct: 632 AYGNLLREVYEEGRGSVSPRDFKSTVGRCRPTFSGWSQQDSQEFLGFLLDALQEDLSRIK 691
Query: 431 QKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
+KPYIE DS P+ +E+A++ W R+DS+I D+F G YKSTL CP C K+
Sbjct: 692 KKPYIEKPDSTDDMINNPEAIKEMADKVWDITCRRDDSVIADLFTGLYKSTLKCPECGKI 751
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF LTLPLP + +V F N +P+ V L +H + L +S
Sbjct: 752 SITFDPFNNLTLPLPLENMWSKSVKFFPLN--DVPVKIEVELSRHSSMESLKQFISVRTG 809
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSIK 576
+ + E L+ AE + + F+ ++N ++ I+
Sbjct: 810 VPV-ERLMGAEEFKDRFFKIYDNTQDVSEEIQ 840
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 100/144 (69%), Gaps = 8/144 (5%)
Query: 732 DVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
DV L+DP+ L + + T +KTR I+L CLD F E L DMWYCP+CKE
Sbjct: 1215 DVQTLHDPA----LKITQRRRVT-RKTR--GITLEECLDEFERAEILSEQDMWYCPRCKE 1267
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL-SKYMKSKDGESY 850
HR+A+KK DLW PD+LV HLKRFS S + ++KLD V+FPI LDL S+ ++ +DG++
Sbjct: 1268 HRRASKKFDLWKTPDILVAHLKRFSSSGWRRDKLDVLVDFPIEGLDLTSRVIQKEDGKAE 1327
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL + +HYGGLGGGHYTAYAK
Sbjct: 1328 IYDLIGVDDHYGGLGGGHYTAYAK 1351
>gi|357618136|gb|EHJ71230.1| putative ubiquitin specific protease [Danaus plexippus]
Length = 1397
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 187/653 (28%), Positives = 281/653 (43%), Gaps = 132/653 (20%)
Query: 25 ERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSI----DNISFDSPHMN 79
ER IV L+ ++ L G ++L+S W+R+W +Y CG S D + DS N
Sbjct: 155 ERDIVLGWLRRETCRGLSVGQFWYLVSASWWRAWLQY-CGSPGSCCRRDDIVPDDSFTTN 213
Query: 80 GVSS------------------------------KRAERPGPIDNSDIIQNGNG-----S 104
S + A PGP+DNS ++ G +
Sbjct: 214 STESMGSLLWPAESASLGSAGGSAGSASSGVGSVRAAPHPGPVDNSPLLGGGGPAVRALT 273
Query: 105 SEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLC 164
EG L L + +D+ LVP +W L WY LPR++I + + +E++ L
Sbjct: 274 GEGGTLRRDVTLAQHRDFELVPDALWHALALWYGAADPLPRQVIRP-LHADVELELYPLQ 332
Query: 165 LKLIDSRDNSQTVIR--------------------------------------LSKKAST 186
+++ Q + S+ A+
Sbjct: 333 MRIYRHVPGPQMDVSASGATTLGLLGAGAAGAGVGAGALYAAPPDRQLAYTAAFSRLATI 392
Query: 187 RQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQ--DILLEVQVD 244
+Q+ E +C G+ +E R+W T L + D+ L++D+ +LLEV+
Sbjct: 393 KQVTEFLCGALGLAREDVRLWAL-----GTGALLLDDERPTLQALRLDERSKLLLEVRNP 447
Query: 245 NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDG 304
+ + G A G + G T R+ +
Sbjct: 448 DLTWPEEIG-----------------ALGAQSACGVTGAARWAE---------------- 474
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLG 363
T + G GL NLGNTC+MN+ALQ + +T LA+YF G + E+N+ NPLG
Sbjct: 475 --RRETLTAPQLPGATGLHNLGNTCYMNAALQSVWNTGPLARYFNSGLHLYEVNSANPLG 532
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
G LAL FG+L +++WSS ++AP + ++R+A +G QHD+QELLA+LLD LH
Sbjct: 533 TGGSLALRFGELCKEVWSSSARSIAPVRLRWCVSRYARDLAGGGQHDAQELLAWLLDALH 592
Query: 424 EDLNRVKQKPYIEM-----KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
EDLNR + +G R D E A E W H RNDS+I ++F GQ KS + C
Sbjct: 593 EDLNRASPPAPAPSPAPPNQPAGPRADRESAAEAWAAHTVRNDSIISELFYGQLKSKVRC 652
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
VC+ S+ FD F L+LPLP V V +GS +P + V + G DL
Sbjct: 653 SVCASESVRFDTFNMLSLPLPMESYVCAIVRVVLLDGS-VPTKYGVRVNSEGTYMDLKEK 711
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQG 591
LS C L D LL+A + I R E+ ++ ++I + +VAY G
Sbjct: 712 LSELCGLSPDLMLLVA-LSGATIGRVLESDNKVSAAIARE--LVAYELPSDNG 761
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 720 GKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLG 779
G + + +DW L S + + V H + + + L SCL AF +EE L
Sbjct: 1082 GVRVMLAIDWDPTALHLRYQSTREKVFVEHGSVQACLSAGSQPVDLASCLRAFTSEERL- 1140
Query: 780 PDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
+ ++C C + ATKKL +W LP VL+ HLKRF Y K V+FP + D +
Sbjct: 1141 -EARYHCGPCSALQPATKKLQMWRLPPVLIIHLKRFQYVNNKWIKSHKVVDFPFEDFDPT 1199
Query: 840 KYMKSKDGESYV 851
Y+ S E+ +
Sbjct: 1200 PYLASVPQETIL 1211
>gi|401406492|ref|XP_003882695.1| Ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
gi|325117111|emb|CBZ52663.1| Ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
Length = 1108
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 149/239 (62%), Gaps = 8/239 (3%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDL 375
GG+ GL NLGNTCF+NSA+QCL L+ YFL G + +IN EN +G G LA A+
Sbjct: 326 GGVCGLANLGNTCFLNSAVQCLSKVLPLSYYFLSGRFVADINEENVMGTQGRLARAYHAT 385
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
LR +W G + +APR K + R +F GYNQ DSQEL+AFLLDGLHEDLNR+K+KPY
Sbjct: 386 LRDMWFGGDSPLAPRDLKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYY 445
Query: 436 EMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
E K GG + D EVA W+ HK NDS+IVD+FQGQY+S L CP C K+S+TFDPFMY
Sbjct: 446 ESKIEGGPEKSDAEVAELSWQRHKEINDSVIVDLFQGQYRSRLECPACGKISVTFDPFMY 505
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLL 552
L+LP+P + T+ A S P F G +L A + CL I LL
Sbjct: 506 LSLPVPPEWRHQVVFTL--AVDSRRPEAFCFQRAFPG---NLDYAKAKQVCLDIVARLL 559
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYS 818
Q + CL F +E L ++MWYC CKEH QA KKLDLW +P +L+ HLKRF + S
Sbjct: 943 QPNTDISDCLRLFSEQERLDIENMWYCSSCKEHVQAYKKLDLWKMPKILILHLKRFHNIS 1002
Query: 819 RYLKNKLDTFVNFPILN---LDLSKY--------MKSKD-GESYVYDLFAISNHYGGLGG 866
R+ ++K+ T V FP LD++ Y M +KD G + +Y+L A++ H G LGG
Sbjct: 1003 RFTRSKIGTKVTFPYKAGDYLDMTPYILPESLEMMHAKDQGFAPLYELVAVNVHSGELGG 1062
Query: 867 GHYTAYAKVNA 877
GHY AYAK+
Sbjct: 1063 GHYFAYAKLRG 1073
>gi|380471969|emb|CCF47017.1| ubiquitin carboxyl-terminal hydrolase, partial [Colletotrichum
higginsianum]
Length = 1676
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 165/275 (60%), Gaps = 16/275 (5%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G GLQNLGNTC+MNSALQC+ +L +YFL D Y E+N NPLG G++A+
Sbjct: 616 KPGRGLGAVGLQNLGNTCYMNSALQCVRSVEELTKYFLTDEYKVELNKANPLGYKGQVAM 675
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G LL+++++ R AV+PR FK + R F G+ Q D+QE L FLLD L EDL+R+K
Sbjct: 676 AYGGLLKEIYAESRGAVSPRDFKNTVGRARSTFQGWGQQDTQEFLGFLLDALQEDLSRIK 735
Query: 431 QKPYIEMKDSGGRPDEEVAN---------ECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
+KPYIE DS DE + N E W + R+DS++ D+F G YKSTL CP C
Sbjct: 736 KKPYIEKPDST---DEMIGNEEAIRKMAEEVWDITRKRDDSVVADLFTGLYKSTLKCPTC 792
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
K+SITFDPF LTLPLP + TV + N + P+ + L KH + L A+S
Sbjct: 793 DKISITFDPFNNLTLPLPMEDMWSRTVKFYPLNDA--PVDIEIELSKHSAIELLKKAVSD 850
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIK 576
+ + E LL AE + + F+ +++ ++ I+
Sbjct: 851 KTGVPV-ELLLGAEEFKSKFFKIYDDNNDVSDEIQ 884
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 122/204 (59%), Gaps = 22/204 (10%)
Query: 690 CSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY------------ 737
S+E SFQ+ + + S ++ +++ G+ I ++DW+++ +L
Sbjct: 1194 SSKEQSFQVVDVEPQPSPLDDVRGGPLVRLGEGI--VVDWSEETWDLVFGKDSRDAEDNR 1251
Query: 738 ------DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKE 791
D ++D PV+ + + + +++ I+L CLD F E L DMWYCP+CKE
Sbjct: 1252 GQKTFGDVEKLRD-PVLEQKRKSRQARKKQGITLEECLDEFEKAEVLSEQDMWYCPRCKE 1310
Query: 792 HRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESY 850
HR+A+KK DLW PD+LV HLKRFS + + ++KLD V+FPI LDL K + ++ G+
Sbjct: 1311 HRRASKKFDLWKTPDILVVHLKRFSSAGWRRDKLDILVDFPIEGLDLHKRVLCQETGKEE 1370
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL A+ +H+GGLGGGHYTAY +
Sbjct: 1371 IYDLIAVDDHFGGLGGGHYTAYGR 1394
>gi|403214829|emb|CCK69329.1| hypothetical protein KNAG_0C02180 [Kazachstania naganishii CBS
8797]
Length = 1231
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 181/342 (52%), Gaps = 38/342 (11%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y YN K G GL NLGNTC+MNS LQCLVH P + YF+ + + EIN NPL
Sbjct: 307 NYFHYN--KLNRSTGTIGLSNLGNTCYMNSGLQCLVHIPQIRDYFVYNGFEKEINVNNPL 364
Query: 363 GMHGELALAFGDLLRKLWSSGRAA----VAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
G G +A +F L++ L+ A V+P FK L F FSG+ Q DSQE LAFL
Sbjct: 365 GFQGHMARSFHGLIQSLFGDSIAPFPSYVSPTHFKSTLVHFNSMFSGFQQQDSQEFLAFL 424
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQGQ 471
LD LHEDLNR+ +KPY+E D +++ANE WK+H RNDS+I D+F G
Sbjct: 425 LDSLHEDLNRIVEKPYVEKPSLKPGDDINDFDTIKKLANETWKSHLMRNDSIITDIFVGM 484
Query: 472 YKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGC 531
YKSTL CP CS VSITFDP+ LTLPLP + V +F + P V L K
Sbjct: 485 YKSTLECPECSNVSITFDPYNDLTLPLPINSSWNAQVRIFPSKLP--PCMIEVELPKAST 542
Query: 532 CKDLILALSTACCLKID-EGLLLAEVYNHQIFRFFENP---------AELISSIKDDEHI 581
+D L A CL ++ + L EV+NHQ + FE+P ELIS + I
Sbjct: 543 YQD--LKEYVAKCLGMNAQNLYGCEVFNHQFYNNFESPDSTAQYLPIYELIS----ESDI 596
Query: 582 VAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPL 623
V + + G + + ++N K +++ LFG P
Sbjct: 597 VVFYELVSEPGDLIIPVLNAISNKESNN------DSLFGVPF 632
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
++ +L CL+ F +E LG D WYCP CKEHRQATKK++LW PDV + HLKRF +R
Sbjct: 890 EQETTLKDCLNLFSKKEVLGMSDSWYCPNCKEHRQATKKIELWNTPDVFLIHLKRFENTR 949
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D + FPI +LD+S+Y+ KD VYDL A+ NHYGG+GGGHYTAY K
Sbjct: 950 SFSDKIDATILFPIEDLDMSEYLVYKDDPRGSVYDLIAVDNHYGGMGGGHYTAYVK 1005
>gi|402086482|gb|EJT81380.1| ubiquitin specific peptidase 11 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1532
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 165/264 (62%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
K G G GL NLGNTC+MNSALQC+ +L +YFL G+ EINT+NPL +G++A+
Sbjct: 457 KSGRTTGCVGLSNLGNTCYMNSALQCVRSVEELTKYFLVGEAEKEINTDNPLAHNGDVAM 516
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ LL++++ S A+ +PR FK + R+AP FSGY Q DSQE + FLLD L EDL+R+
Sbjct: 517 VYYSLLKEMYKDSASASFSPRQFKNVIGRYAPAFSGYGQQDSQEFVGFLLDALQEDLSRI 576
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS PD +E+A++ W K R+DS+I D+F G YKSTLVCP C K
Sbjct: 577 KKKPYIEKPDSTDDMINNPDAIKEMADKVWDITKKRDDSVIADLFTGMYKSTLVCPFCDK 636
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDPF LTLPLP + + +V Y + P+ V L K+ +L ++
Sbjct: 637 VSITFDPFNNLTLPLP--LQNVWSKSVKYVPLNDAPVEINVELDKNSSINELKDYIAARV 694
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ AE + + F+ +E+
Sbjct: 695 GVP-SERLIGAEEFKDKFFKIYED 717
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 104/166 (62%), Gaps = 16/166 (9%)
Query: 725 VLLDWTDDVHELY-----------DPSY--IKDL--PVVHKTGFTVKKTRQEAISLFSCL 769
++++W +D E+ +P++ I+ L P + + + R+ I+L CL
Sbjct: 1091 IVVNWDEDAWEMVYGKAKLNDDRGEPTFNAIETLQDPALAERKRLRNQRRKNGITLDDCL 1150
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F +E L DMWYCP+CKEHR+A KK DLW PD+LV HLKRFS S + ++KLD V
Sbjct: 1151 DEFEKQEILSEQDMWYCPRCKEHRRAKKKFDLWKTPDILVVHLKRFSSSGWRRDKLDILV 1210
Query: 830 NFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FPI LDL+ + + + + +YDL AI +H+GGLGGGHYTA+AK
Sbjct: 1211 DFPIEGLDLTRRVIDRQTNKQEIYDLIAIDDHWGGLGGGHYTAFAK 1256
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 41/214 (19%)
Query: 19 PCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHM 78
P P++ + I LK + L+EG+ FL+S +W + + GD DS H
Sbjct: 106 PPLPEQIKTIETLLKAFGETPLQEGDTAFLVSRQWLEKAQAF--GD---------DSKHA 154
Query: 79 NGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEG---QDYVLVPQQVWEKLFC 135
+S+ + GP+DNSDI+Q E D VR L+ G + Y L Q W+ +
Sbjct: 155 PAKASEVSL--GPVDNSDIVQEILKDVEDKDF-VR--LKPGIGLEHYQLFSQDAWDLVIS 209
Query: 136 WYK-GGPALPRKMIS-----EGIVNEKRVEVFXLCLKL-----------IDSR----DNS 174
WY LP + + EG + + E+ + ID + +
Sbjct: 210 WYGLADGQLPIQRFAHDTAPEGSIPHVQFEIHPPIFAIHRLWSPTSPIPIDQKLKATNPP 269
Query: 175 QTVIRLSKKASTRQLYEKVCKLRGIEQE-KARIW 207
+ S T+ +K+ +L G++ E K R+W
Sbjct: 270 PATLACSSSCRTQAFLKKIKRLAGVDMERKVRLW 303
>gi|301783509|ref|XP_002927172.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like, partial
[Ailuropoda melanoleuca]
Length = 1228
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 269/636 (42%), Gaps = 123/636 (19%)
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGELALAF 372
+N GNTCFMN+ LQCL +T A+Y LG Y + E P+G GE+
Sbjct: 9 RNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPVGRGTQGQGEVTEQL 68
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV--- 429
L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 69 AHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLNHAVKQ 128
Query: 430 -KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
Q P ++ P+ C + + ++FQ QY+S+L CP C K S TF
Sbjct: 129 SGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQKQSNTF 180
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF+ ++LP+P TR + VTV Y M V + G L A+S + D
Sbjct: 181 DPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMETKIPTD 240
Query: 549 EGLLLAEVYNHQIFR------------------FFENPA-------------ELISSIKD 577
+ ++L E+Y R FE P L S++
Sbjct: 241 Q-IVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNSNLNH 299
Query: 578 DEHIVAYRFDRKQG----GKIKLEIVNRWQEK----SASDYLKGSERKLFGAPLVTYLEE 629
+ + +R Q GKI L +K + G + K FG P V +LE+
Sbjct: 300 LKFALDHRLSSMQAAAKQGKIDLPPTRAENDKIVLLVCNRACTGQQGKRFGLPFVLHLEK 359
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSNSHNESVETAELED 688
D+ ++L ++ FL P V ++ V +
Sbjct: 360 T----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCPFSLRVVSVVGITY 401
Query: 689 LCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY----DPSYIK 743
L +E T ER + SC P H+K++++W + + + YI
Sbjct: 402 LLPQEEKPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETKDFLFVNTEDEYIP 454
Query: 744 DLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLD 800
D V +++ R + +L C + EE L PDD W CP CK+ +Q + L
Sbjct: 455 DAESVR-----LQRERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLS 509
Query: 801 LWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS--------------------- 839
LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 510 LWTLPDVLIIHLKRFRQEGDRRVKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWR 569
Query: 840 -KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E YVYDL+A+ NH+G + GGHYTAY K
Sbjct: 570 RPYGLGRDPEDYVYDLYAVCNHHGTMQGGHYTAYCK 605
>gi|212527418|ref|XP_002143866.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
gi|210073264|gb|EEA27351.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
Length = 1448
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 163/275 (59%), Gaps = 20/275 (7%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELAL 370
K G G G NLGNTC+M SALQC+ +L YFL DY ++N NPL +G++A
Sbjct: 471 KDGRPKGNTGFTNLGNTCYMASALQCVRSVEELTLYFLNDYYKKDLNPSNPLSHNGDVAK 530
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+ +LLR ++ A+ +P+ FK + R+ P FSGY Q DSQE + FLLDGL EDLNR++
Sbjct: 531 AYANLLRAVYEDSPASFSPKHFKHTIGRYGPAFSGYGQQDSQEFVLFLLDGLQEDLNRIQ 590
Query: 431 QKPYIEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
+KPYIE DS DE V A+ CW+ +KARNDS+I D+F G YKSTL CPVC
Sbjct: 591 KKPYIEKPDST---DEMVHDPAALRAFADRCWEIYKARNDSVITDLFAGMYKSTLHCPVC 647
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL--ILAL 539
KVSI FDPF LTL LP V T +F+ P+ V + K+ K L ++A
Sbjct: 648 DKVSIIFDPFNNLTLQLP--VENLWTKDIFFFPLHKPPVLIDVEIDKNASIKALKELVAK 705
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAELISS 574
T L++AEVY ++ +R F+N + + S
Sbjct: 706 KTGTDPS---RLIMAEVYRNKFYRLFDNTSTIADS 737
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 129/243 (53%), Gaps = 44/243 (18%)
Query: 650 RTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK 709
RT + G NG + DELS ET ED
Sbjct: 1001 RTSGPSAEFGKMTNGDSSDSEDELSTVSKRLTETTRKED--------------------- 1039
Query: 710 PIQKDSILKPGKHIKVLLDWTDDVHELY-------------DPSY--IKDLPVVHKTGFT 754
P+ ++PG+ I +LDWT+ H+ P++ ++ LP
Sbjct: 1040 PVY---YIRPGEGI--VLDWTETNHDALFGADQKDRNELRGAPTWTNVEHLPDPELAAKR 1094
Query: 755 VKKT--RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
++ R++ +SL CLD F EE L +D WYCP+CKEHR+A+KK +LW PD+LV HL
Sbjct: 1095 AQRANRRKKGLSLDQCLDEFGREEILSENDAWYCPRCKEHRRASKKFELWKTPDILVIHL 1154
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTA 871
KRFS SR ++K+D V+FPI LDL+ + S + GES +YDLFA+ NHYGGLGGGHYTA
Sbjct: 1155 KRFSASRGFRDKIDELVDFPIEGLDLNGRVASTEPGESQIYDLFAVDNHYGGLGGGHYTA 1214
Query: 872 YAK 874
YAK
Sbjct: 1215 YAK 1217
>gi|406868122|gb|EKD21159.1| ubiquitin carboxyl-terminal hydrolase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1506
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 168/280 (60%), Gaps = 11/280 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTC+MNSALQC+ +L +YFL G +EIN NPLG +G +A A+GDLL
Sbjct: 456 GTIGLANLGNTCYMNSALQCVRSVEELTKYFLTGHGKEEINPHNPLGNNGNVARAYGDLL 515
Query: 377 RKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ ++ SG +AV P FK + ++AP FSGY Q DSQE L FLLDGL EDL+RV +KPYI
Sbjct: 516 AQFYNDSGSSAVRPVNFKNTIGKYAPSFSGYGQQDSQEFLGFLLDGLQEDLSRVLKKPYI 575
Query: 436 EMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
E DS P+ E+A + W K R+DS+I D+F G YKSTLVCP C+K+SITFD
Sbjct: 576 EKPDSTDEMVNNPEAIREMAAKVWDITKQRDDSVIADLFTGMYKSTLVCPSCNKISITFD 635
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
PF LTL LP + + V+Y + P+ T+ + K+ L +S + D
Sbjct: 636 PFNNLTLQLP--IESRWSHQVYYFPLNDKPILVTIDIDKNASIGSLKDFVSKRVGVPADR 693
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
L + E Y + + F+++ A I ++H+ Y + K
Sbjct: 694 -LFVCEEYKSKFYTFYKDLAVASEKIGTNDHVAVYELEAK 732
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K ++ I+L CLD F EE L D WYCP+CKEH++A+KK +LW PD+L+ HLKRFS
Sbjct: 1108 KRKKNGITLEDCLDEFGKEEILSESDTWYCPRCKEHKRASKKFELWKTPDILIMHLKRFS 1167
Query: 817 YSRYLKNKLDTFVNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
S + ++KLD V+FP+ +LDL S+ ++S+DG+ +YDLFA+ +H+GGLGGGHYTA+AK
Sbjct: 1168 SSGWRRDKLDVLVDFPLTDLDLSSRVIESEDGKQEIYDLFAVDDHWGGLGGGHYTAFAK 1226
>gi|256271357|gb|EEU06422.1| Ubp12p [Saccharomyces cerevisiae JAY291]
Length = 1254
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|392298462|gb|EIW09559.1| Ubp12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1254
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|323354353|gb|EGA86192.1| Ubp12p [Saccharomyces cerevisiae VL3]
Length = 1257
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|290771039|emb|CAY80589.2| Ubp12p [Saccharomyces cerevisiae EC1118]
Length = 1254
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|6322264|ref|NP_012338.1| Ubp12p [Saccharomyces cerevisiae S288c]
gi|731045|sp|P39538.1|UBP12_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|547597|emb|CAA54762.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1008413|emb|CAA89492.1| UBP12 [Saccharomyces cerevisiae]
gi|285812713|tpg|DAA08611.1| TPA: Ubp12p [Saccharomyces cerevisiae S288c]
Length = 1254
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|365764875|gb|EHN06393.1| Ubp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1254
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|349579011|dbj|GAA24174.1| K7_Ubp12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1254
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVANDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|151944937|gb|EDN63192.1| ubiquitin carboxyl-terminal hydrolase [Saccharomyces cerevisiae
YJM789]
gi|190409319|gb|EDV12584.1| ubiquitin carboxyl-terminal hydrolase 12 [Saccharomyces cerevisiae
RM11-1a]
Length = 1254
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 184/351 (52%), Gaps = 31/351 (8%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
Y ++ + ++N EK + + LFG P L+E+ L+
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEKGYKNAM------LFGVPFFITLKEDELNN 689
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I+L CL F E LG D WYCP CKEHRQATK++ LW PD+L+ HLKRF
Sbjct: 958 KERTITLDDCLQLFSKPEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQ 1017
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDLS+Y+ KD +YDL+A+ NHYGGLGGGHYTAY K
Sbjct: 1018 RSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVK 1074
>gi|347840834|emb|CCD55406.1| similar to ubiquitin carboxyl-terminal hydrolase [Botryotinia
fuckeliana]
Length = 1694
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/278 (44%), Positives = 164/278 (58%), Gaps = 14/278 (5%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELA 369
+K G G GL NLGNTC+MNSALQC+ +L +YF+ D Y E+N++NPLG G +A
Sbjct: 607 SKNGRTPGTVGLGNLGNTCYMNSALQCVRSVEELTKYFVHDVYKAELNSDNPLGHGGCVA 666
Query: 370 LAFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
A+ DLL++++ +V PR FK ++RFA QFSGY Q DSQE + FLLDGL EDL+R
Sbjct: 667 KAYADLLKEIYKEPAPVSVQPRNFKNTVSRFATQFSGYGQQDSQEFIGFLLDGLQEDLSR 726
Query: 429 VKQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
V++KPYIE DS G P+ E+A + W K R+DS+I D+F G YKSTLVCP C
Sbjct: 727 VRKKPYIEKPDSTDEMIGNPEAIREMATKVWDITKQRDDSVIADLFTGMYKSTLVCPHCD 786
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
KVSITFDPF +TL LP T V F N P+ V KH L +S
Sbjct: 787 KVSITFDPFNNMTLQLPIESIWTRIVNFFPLNDK--PVSVVVETDKHASVGTLKRIISQK 844
Query: 543 CCLKIDEGLLLAEVYNHQIFRFF---ENPAELISSIKD 577
+ E + EVY + ++++ E +E I KD
Sbjct: 845 VGVPA-ERIFSCEVYEGKFYKWYLDHEVASEAIEGAKD 881
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 17/167 (10%)
Query: 725 VLLDWTDDVHELYDPSY-----------IKDLPVVHKTGFTVKKT-----RQEAISLFSC 768
+++DW +D E SY ++ P + K+ R++ I+L C
Sbjct: 1242 IVVDWNEDAWETLFGSYNDSDNFRGRPTYENPPTLVDLALDSKRQARESRRKQGITLEDC 1301
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
LD F EE L D WYCP+CKEHR+A+KK ++W PD+L+ HLKRFS S + +NKL
Sbjct: 1302 LDEFGKEEILSEMDTWYCPRCKEHRRASKKFEIWRTPDILIMHLKRFSASGFQRNKLVDH 1361
Query: 829 VNFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LDL S+ ++S+DG+ +YDL A+ +HYGG+GGGHYTA+AK
Sbjct: 1362 VDFPIEGLDLSSRVIESQDGKEEIYDLIAVDDHYGGMGGGHYTAFAK 1408
>gi|156847043|ref|XP_001646407.1| hypothetical protein Kpol_2001p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156117083|gb|EDO18549.1| hypothetical protein Kpol_2001p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 1223
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 296/660 (44%), Gaps = 112/660 (16%)
Query: 17 CLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSP 76
+P P E+R +V L ++D++ KEG+ ++I RWY ++ +P I + +
Sbjct: 75 VIPSLP-EQRHLVLQLAKEADVNAKEGDKVYIIPQRWYDNFM------DPDIQDFN---- 123
Query: 77 HMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCW 136
+ G ID ++II + +D +V Y+ + + V+EK+ W
Sbjct: 124 -----------QIGSID-TNIICKDYDNFILNDYDVTP-------YLSIQESVFEKISSW 164
Query: 137 YKGGP-------ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDN----------SQTVIR 179
Y P L S +V E +F L DS+ N S
Sbjct: 165 YGLAPNSKPIVTCLIYDDQSGSLVTEYNRCIFRLHYLTEDSKTNQYRHHLSQANSIPFFT 224
Query: 180 LSKKASTRQLYEKVCKL-------RGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQ 232
LS A+ ++L K+ + IE+ K ++W F K S L+ ++ L+ +
Sbjct: 225 LSMLATVKELMSKILNVFYEKESHLDIEKTKFKVW--FAKD---SELNQNNSILN-MSYK 278
Query: 233 MDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGS 292
+D + + I+ + GN L + IE I N H F+
Sbjct: 279 LDPYQFMSLPFLTRITEQNFGNTLKNLKIE--TGDFVIEIKQEGKNYHWLSNYFH----- 331
Query: 293 SFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD- 351
YN A +G + GL NLGNTC+MNSALQCLVH P L YFL
Sbjct: 332 ---------------YN-ALTPSRGNI-GLNNLGNTCYMNSALQCLVHIPQLRDYFLYKV 374
Query: 352 YSDEINTENPLGMHGELALAFGDLLRKLWSSG---RAAVAPRAFKGKLARFAPQFSGYNQ 408
+ EIN +NPLG G +A +F L++ L+ + +P FK + F FSGY Q
Sbjct: 375 FEKEINLDNPLGYQGHVARSFAILIQNLFKDELLPSLSYSPTTFKSTVGHFNSMFSGYLQ 434
Query: 409 HDSQELLAFLLDGLHEDLNRVKQKPYIE---MKDSGGRPDEEV----ANECWKNHKARND 461
DSQE +AFLLDGLHEDLNR+ KP +E +K ++EV A++ W +H RND
Sbjct: 435 QDSQEFIAFLLDGLHEDLNRITNKPVVEKPSLKPEDDVSNQEVIKKLADDTWNSHLLRND 494
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMP 521
S+I D+F G YKSTL CP C +S+TFDP+ LTLPLP + +F N P
Sbjct: 495 SIITDIFVGLYKSTLHCPECDNLSVTFDPYNDLTLPLPVDTKWNTKIKLFPQNSP--PCI 552
Query: 522 FTVTLMKHGCCKDLILALSTACCLKIDEGLLLA-EVYNHQIFRFFE------NPAELISS 574
+ + K ++L + A +K++ L E++NHQ + F+ N L
Sbjct: 553 IEIEMEKTSTYQELKEYI--ANLVKMNPSDLYGFEIFNHQFYNSFDSDKSNSNYLPLKEL 610
Query: 575 IKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
I D + I+ Y + + ++N E+ + +LFG P L+E+ L+
Sbjct: 611 ISDADDIIFYEIKSSSPADMVVPVINTKLEEGFKN------PRLFGVPFFVTLKEDELNN 664
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 22/174 (12%)
Query: 716 ILKPGKHIKVLLDWTDD----------VHELYDPSYIKDLPVVHKTGFTVKKTRQ----E 761
ILKP I L +WTD+ V + P+ +K++ + + +K RQ +
Sbjct: 855 ILKPTTFI--LAEWTDESANRVFTQDKVVDWETPAELKNIALEDE-----RKKRQMDGEK 907
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L CL+ F +E LG +D WYCP CKEHRQATK+L LW PD+L+ HLKRF
Sbjct: 908 KITLDDCLNLFAKKEVLGMNDSWYCPTCKEHRQATKQLQLWSTPDILLIHLKRFENQSSF 967
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKD-GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D V FPI +LDLS Y+ + D +S +YDL ++ NHYGGLGGGHYTAY K
Sbjct: 968 SDKIDDTVYFPITDLDLSPYVVNNDESKSTIYDLVSVDNHYGGLGGGHYTAYVK 1021
>gi|219123565|ref|XP_002182093.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406694|gb|EEC46633.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1183
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 162/252 (64%), Gaps = 3/252 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNSALQCL H L + FL + Y ++N +NPLG G LA A+G +L
Sbjct: 557 GRVGLHNLGNTCFMNSALQCLSHATPLTRSFLSNLYLIDVNVDNPLGSGGNLAHAYGAVL 616
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ LW S +++P A K +A FAP+F+G QHD+QE LA+LLDGLHEDLNRV+QKPY+
Sbjct: 617 KDLWMKSNTTSLSPTALKRAIAMFAPRFAGCLQHDAQEFLAYLLDGLHEDLNRVRQKPYV 676
Query: 436 EMKDSGGRPDEEVAN-ECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
EM D + VA W+ + R+DSL++D F GQ++ST VCP C +VS++FD F ++
Sbjct: 677 EMPDITQGQNMAVAGARAWEALRRRDDSLVMDTFYGQFRSTCVCPRCQRVSVSFDAFNHV 736
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
+L +P++V T++V VF SG + V+L + L L L+ C K L+L
Sbjct: 737 SLQIPTSVNATISVGVFVMGESGRWTRYGVSLPRTATTATLRLHLTELCGGKDLARLVLL 796
Query: 555 EVYNHQIFRFFE 566
EV+++ I R +
Sbjct: 797 EVFHNAIVRVVD 808
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 8/122 (6%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+ ++L C + F+ E L ++MWYC CK+H +A K ++LW LP+VLV HLKRF +
Sbjct: 1020 KGVTLDECFETFIQPERLDDNNMWYCSNCKDHVRAMKTMELWRLPNVLVVHLKRFEFRNV 1079
Query: 821 L-KNKLDTFVNFPILNLDLSKYMKSKDGESY-------VYDLFAISNHYGGLGGGHYTAY 872
L ++KL+T V+FP+ LD+SK+ S S+ YDLFA++NH+G +G GHYTA+
Sbjct: 1080 LRRDKLETLVDFPLDGLDMSKHCGSYSSRSFEDEHVPATYDLFAVTNHFGRMGFGHYTAF 1139
Query: 873 AK 874
A+
Sbjct: 1140 AR 1141
>gi|145532773|ref|XP_001452142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419819|emb|CAK84745.1| unnamed protein product [Paramecium tetraurelia]
Length = 342
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 128/181 (70%), Gaps = 1/181 (0%)
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNS QCL +T L QYFL + Y +EIN +NPLG G+L FG LL+KLW + V P
Sbjct: 1 MNSGTQCLSNTYQLTQYFLSNKYFEEINEDNPLGTKGQLVRKFGSLLKKLWCGDKNIVIP 60
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
+FK + +F P F GY QHDS EL+ FLLDGLHEDLNRVK+KPY+E KD GRPD EVA
Sbjct: 61 TSFKKAVGQFQPMFKGYQQHDSSELITFLLDGLHEDLNRVKKKPYVESKDHQGRPDVEVA 120
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
E W+NH ARN S+IVD+ GQYKSTL CP C ++SITFDPF+ + L +P+ +++ +
Sbjct: 121 KEGWENHLARNQSIIVDLMHGQYKSTLKCPNCQQISITFDPFLTVGLGIPNRKQKSIQIK 180
Query: 510 V 510
V
Sbjct: 181 V 181
>gi|196005611|ref|XP_002112672.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
gi|190584713|gb|EDV24782.1| hypothetical protein TRIADDRAFT_56945 [Trichoplax adhaerens]
Length = 930
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 138/222 (62%), Gaps = 2/222 (0%)
Query: 305 YDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLG 363
YD K + G+ GL NLGNTCFMNS LQC+ +T L +FL D +EIN +NPLG
Sbjct: 356 YDDAVNDLKIVRDGMTGLNNLGNTCFMNSILQCMSNTRPLRDFFLECDLRNEINYDNPLG 415
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
G + AF L+R LW + +P K +A A QF GY Q D+QE +A+LLDGLH
Sbjct: 416 SKGAIVAAFAVLIRTLWCGKYHSYSPSKLKSLVAAKATQFMGYAQQDAQEFMAYLLDGLH 475
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRV+ KP ++ + GRPDEEVANE W H+ RNDSLIVD F GQ+KS L+CP C K
Sbjct: 476 EDLNRVRNKPLTQVVEGAGRPDEEVANEAWMVHRKRNDSLIVDYFFGQFKSVLICPECDK 535
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYA-NGSGLPMPFTV 524
S TFDPFM L LP+P+ + V G+G+ F V
Sbjct: 536 KSTTFDPFMVLPLPIPAVKVPIKVIPVINNFPGTGIQKTFMV 577
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 838 LSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+S + ESY+YDL+A+ NHYGGL GGHYTA+A+
Sbjct: 864 ISDSASTNSNESYIYDLYAVVNHYGGLMGGHYTAFAR 900
>gi|400599105|gb|EJP66809.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
2860]
Length = 1565
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 161/271 (59%), Gaps = 10/271 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GLQNLGNTC+MNSALQC +L ++F+ D Y DEIN N LG +G++A+
Sbjct: 594 KLGRSVGVVGLQNLGNTCYMNSALQCFRSVEELTKFFITDAYLDEINKTNLLGYNGKMAM 653
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
A+G LL ++ GR +V+PR FK + R FSG+ Q DSQE L FLLD L EDL+RV
Sbjct: 654 AYGGLLHDIYREGRGSVSPRDFKSTVGRCRSTFSGWGQQDSQEFLGFLLDALQEDLSRVG 713
Query: 431 QKPYIEMKDSGGR----PD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
KPYIE DS P+ E+A + W + R+DS+I D+F G YKSTL CP C K+
Sbjct: 714 NKPYIEKPDSTDEMINDPEAIRELAAKVWDITRQRDDSVIADLFTGMYKSTLKCPECDKI 773
Query: 485 SITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
SITFDPF L LPLP + TV F N +P+ V L KH + L LS
Sbjct: 774 SITFDPFNTLPLPLPLETVWSTTVKFFPLN--DVPVNIDVELPKHSSIEALKAYLSIRTG 831
Query: 545 LKIDEGLLLAEVYNHQIFRFFENPAELISSI 575
+ + E ++ AE + + F+ ++N ++ I
Sbjct: 832 VPV-ERMMGAEEFKDRFFKIYDNTHDVSEEI 861
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 104/171 (60%), Gaps = 19/171 (11%)
Query: 722 HIKVLLDWTDDVHELY-----------------DPSYIKDLPVVHKTGFTVKKTRQEAIS 764
H + +DW DD E+ + ++D PV+ + + + I+
Sbjct: 1207 HEGIAVDWNDDAWEMVFGGNGRGNAADGTRTFLNLETVQD-PVIKANQRRRQNRKSKGIT 1265
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNK 824
L CLD F E L DMWYCP+CKEHR+A+KK DLW P+ LV HLKRFS S + ++K
Sbjct: 1266 LDECLDEFERAEILSEHDMWYCPRCKEHRRASKKFDLWKTPNYLVTHLKRFSSSGWRRDK 1325
Query: 825 LDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LD V+FPI LDL+ + ++ +DG+S VYDL A+ NHYGGLGGGHYTAYAK
Sbjct: 1326 LDVLVDFPIEELDLTARVVEKEDGKSEVYDLIAVDNHYGGLGGGHYTAYAK 1376
>gi|452984513|gb|EME84270.1| hypothetical protein MYCFIDRAFT_214678 [Pseudocercospora fijiensis
CIRAD86]
Length = 1694
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 173/289 (59%), Gaps = 17/289 (5%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G+ G+ GL NLGNTC+MNSALQC+ +LA YFL + +IN +NPLG HG +A
Sbjct: 648 KDGKTRGVTGLTNLGNTCYMNSALQCIRSVEELAIYFLTKKFKSDINDDNPLGYHGAMAH 707
Query: 371 AFGDLLRKLWSSGRAAV-APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++L ++ SG + +P FK KL + P FSGY Q DSQE L+FL+D LHEDLNR+
Sbjct: 708 AYANVLEGIYGSGSTSTFSPNEFKRKLGTYQPMFSGYGQQDSQEFLSFLVDALHEDLNRI 767
Query: 430 KQKPYIEMKDSGGRPDEEVANECW---------KNHKARNDSLIVDVFQGQYKSTLVCPV 480
++KPYIE DS D V + + NH+ RNDS+ +D+F G YK+T+ CP
Sbjct: 768 RKKPYIENPDSD---DARVHDAEYIVELGEIYRNNHRQRNDSIAMDLFSGFYKNTMECPT 824
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C KVS+TFDP+ +T+ LP +T +T Y G P+ + + K+ K L L+
Sbjct: 825 CDKVSVTFDPYSLVTVQLPMEITLQHNIT--YVPLHGKPVIHELDVDKNWTIKALKDHLA 882
Query: 541 TACCLKIDEGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYRFDR 588
+ +AEVYNHQIF+ F++ + + ++I+ ++ I Y ++
Sbjct: 883 KKHAGASANAMWMAEVYNHQIFKVFDDASTIAETNIQSNDFIWIYELEQ 931
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ ++ + L C D E L + WYC +CKE RQA K L++W LPD+LV HLKRF
Sbjct: 1355 EQRKKHGVDLDDCFDVTRRREILSEGNEWYCNRCKEMRQAAKTLEIWTLPDILVVHLKRF 1414
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHYTAYAK 874
+R ++K+D V++P+ LD++ + K+G+ Y YDLFA+ H+GGLGGGHYTAY K
Sbjct: 1415 GGNRSFRDKIDLLVDYPVEGLDMNDKVGLKEGDKDYTYDLFAVDLHFGGLGGGHYTAYVK 1474
>gi|326537233|emb|CCA61015.1| ubiquitin specific peptidase 31 [Equus caballus]
Length = 1356
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 184/635 (28%), Positives = 277/635 (43%), Gaps = 103/635 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMH----------- 365
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y P
Sbjct: 124 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAARPEPPPEPEPEPEPEPPAGRG 183
Query: 366 ----GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
GE+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD
Sbjct: 184 AQGPGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDR 243
Query: 422 LHEDLNRV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
+HEDLN Q P ++ P+ C + + ++FQ QY+S+L
Sbjct: 244 VHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLT 295
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C K S TFDPF+ ++LP+P TR + VTV Y M V + G L
Sbjct: 296 CPHCQKQSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLRE 355
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD---RKQG--G 592
A+S + D+ ++L E+Y R F + +L ++ + + I A+ R +G
Sbjct: 356 AVSVETKIPTDQ-IVLTEMYYDGFHRSFCDTDDL-ETVHESDCIFAFETPEIFRPEGILS 413
Query: 593 KIKLEIVNRWQEKSASDYLK-GSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
+ + + N ++LK G + +P+ T ++ + K++ L
Sbjct: 414 QRGIHLNNNL------NHLKFGLDHCRLSSPIHTAAKQGKVDLPPTRTGTDKIV--LLVC 465
Query: 652 YSSAKAHGGKENGFLPEVI--------DELSNSHNESVETAELEDLCSRELSFQLS---- 699
+ GK G LP V+ D L E ++ +C + F L
Sbjct: 466 NRACTGQQGKRYG-LPFVLHLEKTIAWDLLQKEILEKMKYFLRPTVCIQVCPFSLRVVSV 524
Query: 700 ------LTDERISSCKPIQKDSILK---PG--KHIKVLLDWTDDVHELY----DPSYIKD 744
L E C P D LK PG H+K++++W + + + YI D
Sbjct: 525 VGITYLLPQEEQPLCHPT-VDRALKSCGPGGTAHVKLVVEWDKETKDFLFVNTEDEYIPD 583
Query: 745 LPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
V +++ R + +L C + EE L PDD W CP CK+ +Q + L L
Sbjct: 584 AESVR-----LQRERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSL 638
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS---------------------- 839
W LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 639 WTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRR 698
Query: 840 KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTA+ K
Sbjct: 699 PYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAHCK 733
>gi|344300518|gb|EGW30839.1| hypothetical protein SPAPADRAFT_52038 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1287
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 183/342 (53%), Gaps = 28/342 (8%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELA 369
A GG GL NLGNTC+MNSALQCL+H P++ YF + Y E+N NPLG HG +A
Sbjct: 328 ASTSTSGGHLGLSNLGNTCYMNSALQCLLHVPEINFYFYYNIYKQELNVNNPLGYHGNVA 387
Query: 370 LAFGDLLRKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
+FG LL++ + SG +++PR FK + R++ FSGY Q DSQE L++LLD LHEDL
Sbjct: 388 NSFGSLLKQAFDKRGSGSGSISPRDFKSTIGRYSSMFSGYLQQDSQEFLSWLLDALHEDL 447
Query: 427 NRVKQKPYIEMKD------SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
NR+ +KPY E + + + E++ CW H ARNDS+I D+F G Y+STLVCP
Sbjct: 448 NRIHEKPYCEKPELNDDEINDSKAIIELSKTCWNQHLARNDSVITDLFTGLYQSTLVCPD 507
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVF------YANGSGLPMPFTVTLMKHGCCKD 534
CSK SITFDPF LTLPLP + T T+ G+ + M V L K D
Sbjct: 508 CSKTSITFDPFNDLTLPLPISKKWYHTFTIVDLSPAETKTGTRI-MKLEVELNKTSNFDD 566
Query: 535 LILALSTACCLKIDEGLLLAEVYNHQIFRFFE-----NPAELISS-IKDDEHIVAYRFDR 588
L+ L L + E++++ + F+ N I I+D++ I+ Y
Sbjct: 567 LLNYLGNFLKTPT-TNLFIYEIFHNSFYSDFQRDYIKNRFHPIGDIIRDNDEIIVYIIPH 625
Query: 589 KQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEE 630
I + + N + S + +FG PL L +E
Sbjct: 626 DPESDIIVPVFNAVENADKSYKVTN----IFGIPLFVVLNKE 663
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 17/173 (9%)
Query: 711 IQKDSILKPGKHIKVLLDWTDDV-------HELYDPSYIKDL--PVVHKTGFTVKKTRQE 761
+ KD+IL L DW +++ EL + I L P + + ++ R+
Sbjct: 941 VTKDTIL--------LCDWDNEIFQRCFGEEELTTWNEIPSLSNPELEQNRAHFERQRKA 992
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
ISL+ C+ +F T E LG D+WYCP+CKEH++ATK + +W D+L HLKRF +R
Sbjct: 993 KISLYDCVRSFGTPEVLGEHDLWYCPRCKEHKRATKTIQIWSTGDILTIHLKRFHSARAF 1052
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D ++FPI LD+S Y+ VYDL A+ NHYGGLGGGHYTA K
Sbjct: 1053 SDKIDILIDFPINGLDISSYVSDPIQTDCVYDLIAVDNHYGGLGGGHYTASVK 1105
>gi|68064087|ref|XP_674038.1| ubiquitin carboxyl-terminal hydrolase [Plasmodium berghei strain
ANKA]
gi|56492316|emb|CAH96632.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
berghei]
Length = 611
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 139/214 (64%), Gaps = 5/214 (2%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFG 373
E GG GL NLGNTCF+NS+LQCL YFL G + D IN NP+G HG LA A+
Sbjct: 227 ENGGDRGLINLGNTCFLNSSLQCLSKILKFTNYFLSGSFWDHINYCNPVGQHGRLAKAYY 286
Query: 374 DLLRKLWSSGRAA--VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ L ++W + AP+A K ++ +F GY QHDSQELLAFLLDGLHEDLN +++
Sbjct: 287 ETLLEMWKINKKGKPYAPKALKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQK 346
Query: 432 KPYIEMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPY E K GG RPD EVA WK HK N+S+IVD+FQGQY+S L CP C+K+SITFD
Sbjct: 347 KPYYEEKLQGGLDRPDIEVAEASWKRHKEINNSIIVDLFQGQYRSRLQCPQCNKLSITFD 406
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
PFMYL++PLP + V + + + F+
Sbjct: 407 PFMYLSIPLPPKKNHRIWFHVMLSRNVQMSLRFS 440
>gi|158285368|ref|XP_308272.4| AGAP007600-PA [Anopheles gambiae str. PEST]
gi|157019958|gb|EAA03924.4| AGAP007600-PA [Anopheles gambiae str. PEST]
Length = 1227
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 178/630 (28%), Positives = 279/630 (44%), Gaps = 114/630 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LAQYF+ D Y ++ N + G GEL
Sbjct: 187 GVIGLRNHGNTCFMNAVLQCLSHTDILAQYFVLDLYKADLKRRNKINAKKFGTKGELTEQ 246
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+L+ LW+ A FK + R+ QF QHD+QE L +LLD +HEDLN +
Sbjct: 247 LALVLKSLWTCKDAPDYSSNFKAVVDRYGSQFRSSTQHDAQEFLFWLLDKVHEDLNTATK 306
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+ Y +K++G R DE +A E N+ N+S + VFQ Q++S+L CP C K S TFDPF
Sbjct: 307 RKYKAIKNNG-RSDEVIAAETLANYVRCNNSFVQAVFQAQFRSSLSCPTCGKQSNTFDPF 365
Query: 492 MYLTLPLPSTVTRTMTVTVFYAN--------GSGLPMPFTVTLMKHGCCKDLILALSTAC 543
L++PLP + + V V Y++ G G+P V ++ D +AL
Sbjct: 366 YCLSVPLPQLSQQPVLVKVIYSSQQPKQVKLGLGIPHGSPVLALREQLHADTGIAL---- 421
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-------DRKQGGKIKL 596
+ ++L E+ R F + + L+SS+++++ + + G KI L
Sbjct: 422 -----DRMILTEICESGFSRVFCD-SHLMSSVRENDPLYCIECPPAGSGQEAASGTKIVL 475
Query: 597 EIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAK 656
+ N D+ G K FG P + + +S +++ + K +S + R S
Sbjct: 476 CLCN-----GKRDF--GGHVKRFGTPFCLVVHRD-VSYSELQKLLLKEMSNILR--SEVF 525
Query: 657 AHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSI 716
+ + S + +E L + + LS+
Sbjct: 526 TFATPAQSLFRMRLQDPSCDADTYLEATVEHPLFTEMIDLALSVLPTDAGPA-------- 577
Query: 717 LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDA 771
H+K+LL+WT+ D + D V H+ +V + R++ A++L C +
Sbjct: 578 -----HVKLLLEWTEPERFFND---MGDPFVEHE---SVSQMREKIPASSALTLEQCFEH 626
Query: 772 FLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN----KLDT 827
+ E LG D+ W CP C+E+ K L LW LPD++V HLKRF + + KL
Sbjct: 627 YTKAETLGQDNAWKCPHCQEYLPVVKTLGLWSLPDIMVIHLKRFRQQQLRASTQAAKLTN 686
Query: 828 FVNFPILNLDLSKYMKSKDGESYV------------------------------------ 851
V FP+ D++ ++ ++D ++
Sbjct: 687 LVKFPLHGFDMTPHL-ARDPSAHQQSSHPPWRKIMRSAHSNQTHSMLAGAGGGGGTGRRQ 745
Query: 852 ------YDLFAISNHYG-GLGGGHYTAYAK 874
YDL+A+ H G L GHYTA K
Sbjct: 746 LAMDNRYDLYAVCYHQGDTLETGHYTAACK 775
>gi|350290282|gb|EGZ71496.1| UCH-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 1747
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 164/264 (62%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L +YFL + EIN +NPL +G++A+
Sbjct: 662 RSGRTPGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAM 721
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + +VAPR FKG + R+AP FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 722 AYMRLLDEIYKNPAPNSVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRI 781
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS G P +E+A + W K R+DS+I D+F G YKSTL CPVC K
Sbjct: 782 KKKPYIEKPDSTDDMIGNPAAIKEMAEKVWDITKKRDDSIIADLFTGLYKSTLHCPVCDK 841
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+SITFDPF LTLPLP + + TV + N P+ V + K K + +ST
Sbjct: 842 ISITFDPFNNLTLPLPMSNVWSRTVKYYPLNEP--PVEIVVEVDKTSAFKAIKEFISTRV 899
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ E + + F+ +++
Sbjct: 900 GVP-PERLVGGEEFKGKFFKQYDD 922
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 725 VLLDWTDDVHE-LYDP---SYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTE 775
+++DW +D + ++ P +Y K + ++ KK ++E ISL CL F E
Sbjct: 1291 IVVDWYEDAFDAVFSPANRTYNK-IETLNDPSLGAKKRQRELRKKHGISLDDCLAEFEKE 1349
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS + ++KLD V+FPI
Sbjct: 1350 EILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVGWRRDKLDVLVDFPIEG 1409
Query: 836 LDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDL+ + + +DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 1410 LDLTERVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1449
>gi|340371267|ref|XP_003384167.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like
[Amphimedon queenslandica]
Length = 1159
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 155/248 (62%), Gaps = 5/248 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS+LQC+ + L YF DY EIN +NPLGM G +A +G+L+
Sbjct: 380 GATGLSNLGNTCFMNSSLQCISNLQPLTTYFKEKDYLLEINKQNPLGMKGVMAKRYGELV 439
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LW+ ++ P F+ +A+ APQF+ + Q D+QELL+F+LDGLHEDLNRVK KPY E
Sbjct: 440 SDLWTGHSKSITPWRFRYTIAQNAPQFNNFQQQDAQELLSFVLDGLHEDLNRVKVKPYRE 499
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ DS RP EVA+E W H+ RN+S+IVD+FQGQ KS + C VCS SI FDPF +L+L
Sbjct: 500 LPDSDDRPIAEVADEAWSYHRERNNSIIVDLFQGQLKSLVECTVCSYKSIKFDPFTFLSL 559
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + ++ + V +GS P + + L + L L C + L+L +V
Sbjct: 560 PLPLESSTSLEIIVIPIDGSQ-PTRYCLKLELDAKYRLLKEQLVEMCQIN---RLILVDV 615
Query: 557 YNHQIFRF 564
Y + F
Sbjct: 616 YGGTVRSF 623
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 725 VLLDWTDD-VHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
+ +DW D +H Y + P H++ +K T + I L CL AF E LG D++
Sbjct: 813 IAIDWEDGFIHLKYQSGL--ERPKDHESMDIMKNTDSQPIELSECLAAFSKPEELGEDEL 870
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKY 841
WYC +C+ HR A K L++W LP VL+ HLKRF + R++K++ V FP+ LD Y
Sbjct: 871 WYCKKCETHRPARKTLEVWKLPPVLIIHLKRFHFHNGRWIKSQ--QRVRFPMSGLDPYAY 928
Query: 842 MKSK 845
S+
Sbjct: 929 SDSE 932
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Query: 839 SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
S YM S+ +YDLFAI+ H G LGGGHYT++AK
Sbjct: 1044 SVYMSSRP----IYDLFAITVHSGILGGGHYTSFAK 1075
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 112 VRRNLEEGQDYVLVPQQVWEKLFCWY-----KGGPALPRKMIS-EGIVN 154
++ +L+E DY L+P+ VW L WY GGP LPR +I+ EG+V+
Sbjct: 156 LKPSLKEYVDYYLLPEDVWRALVTWYGTAGLGGGPPLPRPVINEEGVVS 204
>gi|336470026|gb|EGO58188.1| hypothetical protein NEUTE1DRAFT_122471 [Neurospora tetrasperma
FGSC 2508]
Length = 1744
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 164/264 (62%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L +YFL + EIN +NPL +G++A+
Sbjct: 660 RSGRTPGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAM 719
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + +VAPR FKG + R+AP FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 720 AYMRLLDEIYKNPAPNSVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRI 779
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS G P +E+A + W K R+DS+I D+F G YKSTL CPVC K
Sbjct: 780 KKKPYIEKPDSTDDMIGNPAAIKEMAEKVWDITKKRDDSIIADLFTGLYKSTLHCPVCDK 839
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+SITFDPF LTLPLP + + TV + N P+ V + K K + +ST
Sbjct: 840 ISITFDPFNNLTLPLPMSNVWSRTVKYYPLNEP--PVEIVVEVDKTSAFKAIKEFISTRV 897
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ E + + F+ +++
Sbjct: 898 GVP-PERLVGGEEFKGKFFKQYDD 920
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 725 VLLDWTDDVHE-LYDP---SYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTE 775
+++DW +D + ++ P +Y K + ++ KK ++E ISL CL F E
Sbjct: 1289 IVVDWYEDAFDAVFSPANRTYNK-IETLNDPSLGAKKRQRELRKKHGISLDDCLAEFEKE 1347
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS + ++KLD V+FPI
Sbjct: 1348 EILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVGWRRDKLDVLVDFPIEG 1407
Query: 836 LDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDL+ + + +DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 1408 LDLTERVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1447
>gi|195078736|ref|XP_001997241.1| GH17697 [Drosophila grimshawi]
gi|193906143|gb|EDW05010.1| GH17697 [Drosophila grimshawi]
Length = 1065
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/245 (47%), Positives = 156/245 (63%), Gaps = 3/245 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMN+ALQ L +T LAQYF + E+N N LG G+LA+ + +LL
Sbjct: 35 GATGLHNLGNTCFMNAALQVLFNTQPLAQYFHRQMHRFELNAANKLGTRGQLAMRYSELL 94
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++W++ +VAP + + + APQFSG QHDSQELL +LLD LHEDLNRV +KPY E
Sbjct: 95 KEVWTATTRSVAPLKLRFCVNKHAPQFSGGGQHDSQELLEWLLDALHEDLNRVMEKPYSE 154
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD+ VA E W H ARN S+I+D+F GQ KS + C C S+ FDPF L+L
Sbjct: 155 LKDSNGRPDKIVAAEAWSQHHARNQSIIIDLFYGQLKSKVSCLSCGHESVRFDPFSLLSL 214
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + V V +GS +P+ + + L DL L+T C L+ +L+ E+
Sbjct: 215 PLPVENYVYLEVLVILLDGS-VPIKYGLRLNSECKYADLKHKLATLCPLQ-PSLMLVCEL 272
Query: 557 YNHQI 561
+N QI
Sbjct: 273 WNSQI 277
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L S ++ L V H+T ++ + E + L CL AF +EE L + W
Sbjct: 734 IAIDWDPTALHLRYQSTLERLWVDHETIAICRREQVEPVDLNHCLRAFTSEEKL---EQW 790
Query: 785 Y-CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMK 843
Y C CK + ATKKL +W LP +L+ HLKRF+ K V+FP + D + Y+
Sbjct: 791 YHCSHCKGKKPATKKLQIWKLPPILIVHLKRFNCVNGKWVKSQKVVHFPFDDFDPTPYLA 850
Query: 844 SKDGES 849
S E+
Sbjct: 851 SVPQET 856
>gi|118364914|ref|XP_001015678.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89297445|gb|EAR95433.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1196
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
G+ GLQNLGNTCFMNSALQCL + DL+++ + D + ++N +NPLG G LA ++ +L
Sbjct: 570 NGVCGLQNLGNTCFMNSALQCLSNVQDLSEFMIQDKFIHDLNKDNPLGTGGYLAASYAEL 629
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
++ +W + +P K + RFAPQFSGY+Q DS ELL++LLDG+HEDLNRVK+KP +
Sbjct: 630 IKDMWRGSDSYSSPWDLKKIIGRFAPQFSGYSQQDSHELLSYLLDGIHEDLNRVKKKPLV 689
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
+S G+ D EVA + W+N++ RN S+IVD+ GQ+KST+ CP C+K+S+TFDP+M ++
Sbjct: 690 NQIESDGQNDLEVALKSWENYQKRNRSIIVDLMVGQFKSTINCPTCNKISVTFDPYMAIS 749
Query: 496 LPLPSTVTRTMTVTVFYANGSGL 518
+P+PS ++ V + + + L
Sbjct: 750 VPVPSIAFLSINVYIQFKDEVSL 772
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 88/133 (66%), Gaps = 15/133 (11%)
Query: 757 KTRQEA-ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
KT+ +A +L+ CLD F +E L + WYC CK+H+QA+K+++++ P +L+ H+KRF
Sbjct: 1021 KTKSKAEYNLYDCLDLFTQKEVLDKGNEWYCNVCKQHKQASKRMEIFDTPKILIIHIKRF 1080
Query: 816 SYSR-------YLKN---KLDTFVNFPILNLDLSKYMKS----KDGESYVYDLFAISNHY 861
SR Y ++ KLD F+NFPI L+LSKY+ S + E +YDLFA+SNHY
Sbjct: 1081 RTSRVSSIGNFYFQSGGQKLDDFINFPINGLNLSKYVLSHQYKQTNEPLLYDLFAVSNHY 1140
Query: 862 GGLGGGHYTAYAK 874
G + GGHYTAYAK
Sbjct: 1141 GSMSGGHYTAYAK 1153
>gi|164429141|ref|XP_956165.2| hypothetical protein NCU00480 [Neurospora crassa OR74A]
gi|157072425|gb|EAA26929.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1754
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 164/264 (62%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L +YFL + EIN +NPL +G++A+
Sbjct: 670 RSGRTPGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAM 729
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + +VAPR FKG + R+AP FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 730 AYMRLLDEIYKNPAPNSVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRI 789
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS G P +E+A + W K R+DS+I D+F G YKSTL CPVC K
Sbjct: 790 KKKPYIEKPDSTDDMIGNPAAIKEMAEKVWDITKKRDDSIIADLFTGLYKSTLHCPVCDK 849
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+SITFDPF LTLPLP + + TV + N P+ V + K K + +ST
Sbjct: 850 ISITFDPFNNLTLPLPMSNVWSRTVKYYPLNEP--PVEIVVEVDKTSAFKAIKEFISTRV 907
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ E + + F+ +++
Sbjct: 908 GVP-PERLVGGEEFKGKFFKQYDD 930
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 725 VLLDWTDDVHE-LYDP---SYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTE 775
+++DW +D + ++ P +Y K + ++ KK ++E ISL CL F E
Sbjct: 1299 IVVDWYEDAFDTVFSPANRTYNK-IETLNDPSLGAKKRQRELRKKHGISLDDCLAEFEKE 1357
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS + ++KLD V+FPI
Sbjct: 1358 EILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVGWRRDKLDVLVDFPIEG 1417
Query: 836 LDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDL+ + + +DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 1418 LDLTERVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1457
>gi|301111474|ref|XP_002904816.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
gi|262095146|gb|EEY53198.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
Length = 1769
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 160/273 (58%), Gaps = 7/273 (2%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
++ GG GL NLGNTC+MNSALQCL +T LA+YFL G Y ++IN + LG+ G+LA
Sbjct: 955 RRMRSGGSVGLANLGNTCYMNSALQCLTNTKLLAEYFLSGMYLEDINRTSTLGLQGKLAE 1014
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G L +W + +++PR FK + +F F G +Q D+QELLAFLL GL EDLNR++
Sbjct: 1015 VYGKLAEDMWCVKQKSISPRNFKKSIGKFNEVFRGNDQQDAQELLAFLLSGLSEDLNRIQ 1074
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
KPYIE DS GR D ++A+E W+NH R S+IV +F GQYKS L C VC S F+P
Sbjct: 1075 DKPYIEQPDSDGRYDADLADEWWRNHLRREVSIIVALFTGQYKSLLTCSVCGFKSARFEP 1134
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
F +L +PLP T+TV + ANG PM +V L DL L C + D
Sbjct: 1135 FTFLQVPLPEPKHNTVTVQLMLANGVT-PMKVSVRLSISATIFDLKHELMKMCREEFD-- 1191
Query: 551 LLLAEVYNHQIFRFFENPAELISSIKDDEHIVA 583
LA+V I + E +I S K D V
Sbjct: 1192 --LADVTESDI-KLCEFSGSMILSFKADNRRVG 1221
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Query: 758 TRQEAIS-----LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
R EAI L CLDAF +EE + YC C++H++ TKKL++W LP V+V HL
Sbjct: 1509 ARNEAIDKGPVPLKHCLDAFTSEEKISEG---YCSSCRKHQEMTKKLEIWRLPPVMVVHL 1565
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDL 838
KRF Y++ + KL + V FPI +LDL
Sbjct: 1566 KRFQYTQTYRRKLASLVEFPIHDLDL 1591
>gi|226443061|ref|NP_001028345.1| ubiquitin specific protease 31 [Mus musculus]
Length = 1344
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/646 (29%), Positives = 273/646 (42%), Gaps = 133/646 (20%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY----------SDEINTENPLGMHG 366
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y S++ P G G
Sbjct: 121 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPEPESEQPAGRGPHG-QG 179
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
E+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDL
Sbjct: 180 EVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDL 239
Query: 427 NR-VKQ--KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
N VKQ +P ++ E C + + ++FQ QY+S+L CP C K
Sbjct: 240 NHAVKQSGQPPLKPPSETDMMPEGPFPVC--------STFVQELFQAQYRSSLTCPHCQK 291
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 292 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMET 351
Query: 544 CLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIKD----- 577
+ D+ +L L V+ FE P E I S +
Sbjct: 352 KIPTDQIVLTEMYYDGFHRSFSDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNN 411
Query: 578 ---------DEHIVAY---------RFD---RKQGGKIKLEIVNRWQEKSASDYLKGSER 616
D H ++ R D R KI L + NR G +
Sbjct: 412 NLNHLKFGLDHHRLSSPAPTAAKQGRVDLPTRVASDKIVLLVCNR--------ACTGQQG 463
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSN 675
K FG P V +LE+ D+ ++L ++ FL P V ++
Sbjct: 464 KRFGLPFVLHLEKT----VAWDLLQKEILEKMKY--------------FLRPTVSIQVCP 505
Query: 676 SHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
V + L +E T ER + SC P H+K++++W +
Sbjct: 506 FSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETK 558
Query: 735 ELY----DPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
+ + YI D V + + + +L C + EE L PDD W CP CK
Sbjct: 559 DFLFVNTEDEYIPDAESVRLQ--KEQHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCK 616
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS----------- 839
+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 617 QLQQGSITLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSW 676
Query: 840 -----------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTAY K
Sbjct: 677 SLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCK 722
>gi|346324794|gb|EGX94391.1| ubiquitin C-terminal hydrolase, putative [Cordyceps militaris CM01]
Length = 1524
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 157/261 (60%), Gaps = 10/261 (3%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAF 372
G G+ GL NLGNTC+MNSALQC+ +L ++F+ G Y EIN N LG +G++A +
Sbjct: 568 GRSVGVVGLHNLGNTCYMNSALQCVRSVEELTKFFITGAYVAEINKTNLLGYNGKIASTY 627
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G LLR ++ GR +V+PR FK + R FSG+ Q DSQE L FLLD L EDL+R+K K
Sbjct: 628 GGLLRDIYQEGRGSVSPRDFKSTVGRCRSTFSGWGQQDSQEFLGFLLDALQEDLSRIKNK 687
Query: 433 PYIEMKDSGGR----PD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
PYIE DS P+ E+A + W+ + R+DS+I D+F G YKSTL CP C K+SI
Sbjct: 688 PYIEKPDSTDEMIDDPEAIREMAAKVWEITRLRDDSVIADLFTGMYKSTLKCPECGKISI 747
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDPF L LPLP + TV F N +P+ V L KH + L LS +
Sbjct: 748 TFDPFNTLPLPLPLETVWSKTVKFFPLN--DVPVNIDVELPKHSSIEALKAYLSLRTGVP 805
Query: 547 IDEGLLLAEVYNHQIFRFFEN 567
+ E ++ AE Y + F+ ++N
Sbjct: 806 V-ERMMGAEEYKEKFFKIYDN 825
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 104/167 (62%), Gaps = 17/167 (10%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPV---------------VHKTGFTVKKTRQ-EAISLFSC 768
+ +DW +D E+ K+ P + K ++TR+ I+L C
Sbjct: 1178 IAVDWNEDAWEMVFGGKGKENPAEGTRTFLRLQSLQDPIIKINQRRRQTRKSRGITLDEC 1237
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTF 828
LD F E L +DMWYCP+CKEHR+A+KK DLW PD LV HLKRFS S + ++KLD
Sbjct: 1238 LDEFERAEILSENDMWYCPRCKEHRRASKKFDLWKTPDYLVTHLKRFSSSGWRRDKLDVL 1297
Query: 829 VNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+FPI LDL+ + ++ +DG+S VYDL A+ +HYGGLGGGHYTAYAK
Sbjct: 1298 VDFPIEELDLTARVIEKEDGKSEVYDLIAVDDHYGGLGGGHYTAYAK 1344
>gi|440480617|gb|ELQ61272.1| ubiquitin carboxyl-terminal hydrolase 15 [Magnaporthe oryzae P131]
Length = 2841
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 164/265 (61%), Gaps = 11/265 (4%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
AK G G GL NLGNTC+MNSALQC+ +L +YFL G+ EINT+NPL +G++A
Sbjct: 1753 AKSGRTVGCVGLGNLGNTCYMNSALQCVRSVEELTKYFLVGEAEKEINTDNPLAHNGDVA 1812
Query: 370 LAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
+ + LL+ ++ + +++PR FK + R+AP FSGY Q DSQE + FLLDGL EDL+R
Sbjct: 1813 MVYYKLLKDIYQVNAPPSISPRQFKNTIGRYAPAFSGYGQQDSQEFVGFLLDGLQEDLSR 1872
Query: 429 VKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
VK+KPYIE DS + +E+A++ W K R+DS+I D+F G YKSTLVCP+C
Sbjct: 1873 VKKKPYIEKPDSTDDMINNPQAIKEMADKVWDITKKRDDSVIADLFTGMYKSTLVCPICH 1932
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+SITFDPF LTLPLP + ++ Y + P+ V L K+ + L ++
Sbjct: 1933 KISITFDPFNNLTLPLP--MQNLWNKSIKYVPLNDAPVELHVELDKNSSIRSLRDYIAAR 1990
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ AE + + F +E+
Sbjct: 1991 VGVSA-ERLIGAEEFKDKFFTVYED 2014
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 725 VLLDWTDDVHE-LYDPSYIKD---------LPVVHKTGFTVKKT-----RQEAISLFSCL 769
+++DW +D E +Y + D + VH +K R+ ISL CL
Sbjct: 2394 IVVDWNEDAWEQVYGSNRANDGRGEPTFNAIETVHDPALAERKKQRAQRRKNGISLDDCL 2453
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F +E L D WYCP+CKEH +A+KK DLW PD+LV HLKRFS S + ++KLD V
Sbjct: 2454 DEFEKQEVLSEQDTWYCPRCKEHVRASKKFDLWKTPDILVVHLKRFSSSGWRRDKLDILV 2513
Query: 830 NFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FPI LDLS + + + G+ V+DL I +H+GGLGGGHYTA+AK
Sbjct: 2514 DFPIEGLDLSRRVIDQQTGKEEVFDLIGIDDHWGGLGGGHYTAFAK 2559
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSD 96
D L+EG+ +L+S R +W R +E ++P GP+DNSD
Sbjct: 1419 DQPLQEGDKAYLVS-RGPLNWARPYSDEEKHTKEDDGEAPE------------GPVDNSD 1465
Query: 97 IIQNGNGSSEGDDLEVRRNLEEG-QDYVLVPQQVWEKLFCWY 137
II + +G+D VR G + YVL Q W+ L WY
Sbjct: 1466 IIHSIIKDIDGNDF-VRLKPGMGLEHYVLFSQDAWDLLMSWY 1506
>gi|389625819|ref|XP_003710563.1| ubiquitin specific peptidase 11 [Magnaporthe oryzae 70-15]
gi|351650092|gb|EHA57951.1| ubiquitin specific peptidase 11 [Magnaporthe oryzae 70-15]
Length = 1515
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 164/265 (61%), Gaps = 11/265 (4%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
AK G G GL NLGNTC+MNSALQC+ +L +YFL G+ EINT+NPL +G++A
Sbjct: 430 AKSGRTVGCVGLGNLGNTCYMNSALQCVRSVEELTKYFLVGEAEKEINTDNPLAHNGDVA 489
Query: 370 LAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
+ + LL+ ++ + +++PR FK + R+AP FSGY Q DSQE + FLLDGL EDL+R
Sbjct: 490 MVYYKLLKDIYQVNAPPSISPRQFKNTIGRYAPAFSGYGQQDSQEFVGFLLDGLQEDLSR 549
Query: 429 VKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
VK+KPYIE DS + +E+A++ W K R+DS+I D+F G YKSTLVCP+C
Sbjct: 550 VKKKPYIEKPDSTDDMINNPQAIKEMADKVWDITKKRDDSVIADLFTGMYKSTLVCPICH 609
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+SITFDPF LTLPLP + ++ Y + P+ V L K+ + L ++
Sbjct: 610 KISITFDPFNNLTLPLP--MQNLWNKSIKYVPLNDAPVELHVELDKNSSIRSLRDYIAAR 667
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ AE + + F +E+
Sbjct: 668 VGVSA-ERLIGAEEFKDKFFTVYED 691
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 725 VLLDWTDDVHE-LYDPSYIKD---------LPVVHKTGFTVKKT-----RQEAISLFSCL 769
+++DW +D E +Y + D + VH +K R+ ISL CL
Sbjct: 1068 IVVDWNEDAWEQVYGSNRANDGRGEPTFNAIETVHDPALAERKKQRAQRRKNGISLDDCL 1127
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F +E L D WYCP+CKEH +A+KK DLW PD+LV HLKRFS S + ++KLD V
Sbjct: 1128 DEFEKQEVLSEQDTWYCPRCKEHVRASKKFDLWKTPDILVVHLKRFSSSGWRRDKLDILV 1187
Query: 830 NFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FPI LDLS + + + G+ V+DL I +H+GGLGGGHYTA+AK
Sbjct: 1188 DFPIEGLDLSRRVIDQQTGKEEVFDLIGIDDHWGGLGGGHYTAFAK 1233
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 32 LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGP 91
LK D L+EG+ +L+S R +W R +E ++P GP
Sbjct: 91 LKAFDDQPLQEGDKAYLVS-RGPLNWARPYSDEEKHTKEDDGEAPE------------GP 137
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLEEG-QDYVLVPQQVWEKLFCWY 137
+DNSDII + +G+D VR G + YVL Q W+ L WY
Sbjct: 138 VDNSDIIHSIIKDIDGNDF-VRLKPGMGLEHYVLFSQDAWDLLMSWY 183
>gi|440467717|gb|ELQ36916.1| ubiquitin carboxyl-terminal hydrolase 15 [Magnaporthe oryzae Y34]
Length = 2855
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 164/265 (61%), Gaps = 11/265 (4%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
AK G G GL NLGNTC+MNSALQC+ +L +YFL G+ EINT+NPL +G++A
Sbjct: 1767 AKSGRTVGCVGLGNLGNTCYMNSALQCVRSVEELTKYFLVGEAEKEINTDNPLAHNGDVA 1826
Query: 370 LAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
+ + LL+ ++ + +++PR FK + R+AP FSGY Q DSQE + FLLDGL EDL+R
Sbjct: 1827 MVYYKLLKDIYQVNAPPSISPRQFKNTIGRYAPAFSGYGQQDSQEFVGFLLDGLQEDLSR 1886
Query: 429 VKQKPYIEMKDS------GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
VK+KPYIE DS + +E+A++ W K R+DS+I D+F G YKSTLVCP+C
Sbjct: 1887 VKKKPYIEKPDSTDDMINNPQAIKEMADKVWDITKKRDDSVIADLFTGMYKSTLVCPICH 1946
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+SITFDPF LTLPLP + ++ Y + P+ V L K+ + L ++
Sbjct: 1947 KISITFDPFNNLTLPLP--MQNLWNKSIKYVPLNDAPVELHVELDKNSSIRSLRDYIAAR 2004
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ AE + + F +E+
Sbjct: 2005 VGVSA-ERLIGAEEFKDKFFTVYED 2028
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 725 VLLDWTDDVHE-LYDPSYIKD---------LPVVHKTGFTVKKT-----RQEAISLFSCL 769
+++DW +D E +Y + D + VH +K R+ ISL CL
Sbjct: 2408 IVVDWNEDAWEQVYGSNRANDGRGEPTFNAIETVHDPALAERKKQRAQRRKNGISLDDCL 2467
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F +E L D WYCP+CKEH +A+KK DLW PD+LV HLKRFS S + ++KLD V
Sbjct: 2468 DEFEKQEVLSEQDTWYCPRCKEHVRASKKFDLWKTPDILVVHLKRFSSSGWRRDKLDILV 2527
Query: 830 NFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FPI LDLS + + + G+ V+DL I +H+GGLGGGHYTA+AK
Sbjct: 2528 DFPIEGLDLSRRVIDQQTGKEEVFDLIGIDDHWGGLGGGHYTAFAK 2573
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 37 DLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSD 96
D L+EG+ +L+S R +W R +E ++P GP+DNSD
Sbjct: 1433 DQPLQEGDKAYLVS-RGPLNWARPYSDEEKHTKEDDGEAPE------------GPVDNSD 1479
Query: 97 IIQNGNGSSEGDDLEVRRNLEEG-QDYVLVPQQVWEKLFCWY 137
II + +G+D VR G + YVL Q W+ L WY
Sbjct: 1480 IIHSIIKDIDGNDF-VRLKPGMGLEHYVLFSQDAWDLLMSWY 1520
>gi|392891842|ref|NP_001254304.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
gi|3875534|emb|CAA91317.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L +YFL + Y EIN NPLG G LA AF D +
Sbjct: 421 GYTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFM 480
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++WS + A+ P K +A A QF+ + QHD+ E L+FLLDGLHED+NRVK+KP
Sbjct: 481 HQMWSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTG 540
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GR D +V+NE WKNH RNDS+ VD+F GQ KS + CP C +VSITFDPF+YL +
Sbjct: 541 TVESHGRHDLDVSNEAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPV 600
Query: 497 PLPSTVTRTMTVTVFYA-NGSGLPMPFTVTLMKHGCCKDLILALS 540
P P + T +F+ P TV+ G D + +S
Sbjct: 601 PFPK--NKQSTDLIFWPLENQTKPYKLTVSYSTEGTVADFLSVVS 643
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
G+ + L LD F E L P++ WYC CKE+ +ATKKL L+ LP VL+
Sbjct: 897 GYVKSNNSETNPHLTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQ 956
Query: 812 LKRFSYSRYL-------KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYG 862
LKRF Y+ + ++K V +P+ +LD+S ++ S S +YDL + H G
Sbjct: 957 LKRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLTGVVCHSG 1016
Query: 863 GLGGGHYTAYAKV 875
GHY + ++
Sbjct: 1017 NSYFGHYISMGRL 1029
>gi|300176336|emb|CBK23647.2| unnamed protein product [Blastocystis hominis]
Length = 439
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 199/391 (50%), Gaps = 58/391 (14%)
Query: 106 EGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFX--- 162
E D+L + NL E ++Y+++ + +W ++ WY GGP + R++I N +
Sbjct: 2 EDDELRLLSNLTEKKEYMIISESLWNAIYHWYGGGPVISRRVIRASNKNLELELYPLLLH 61
Query: 163 LCLKLID-SRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDV 221
+CL D + D S + SK + ++ +++C++ +E K R+W + Q + L
Sbjct: 62 ICLCNEDGTPDQSNESLLCSKVQTVERVKKRICQIYDLEPNKCRLWILEDAQDNDILLKD 121
Query: 222 SDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHT 281
+TL+D L + +++E + +NG A V
Sbjct: 122 EKKTLEDLELCEEATVMIEERNENG----------AFV---------------------- 149
Query: 282 TGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHT 341
+G++ D T + GL GL+NLGNTC+MNS+LQCL HT
Sbjct: 150 ------------YGTS--------DDRKTKRSNGVPGLTGLENLGNTCYMNSSLQCLTHT 189
Query: 342 PDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
L YFL GDY+ +IN E+ GM+GELA AFG L+ +W +APR FK +L F
Sbjct: 190 NLLRDYFLSGDYASDINPESSDGMNGELANAFGVLMSAMWEMQTRVIAPRRFKNELCMFQ 249
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
PQF GY QHD+QELL+ +LDGL EDLN +KPY+E+ D + E+A W H +R
Sbjct: 250 PQFQGYTQHDAQELLSVVLDGLSEDLNLTYKKPYVEL-DGDYCSESELARRYWVLHCSRE 308
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
S+I +F GQ+KS C C+ S FDPF
Sbjct: 309 QSIITALFCGQFKSLAQCTACNYSSAKFDPF 339
>gi|70953824|ref|XP_745989.1| ubiquitin carboxyl-terminal hydrolase 2 [Plasmodium chabaudi
chabaudi]
gi|56526478|emb|CAH79598.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
chabaudi chabaudi]
Length = 751
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 139/214 (64%), Gaps = 5/214 (2%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFG 373
E GG GL NLGNTCF+NS+LQCL YFL G + D IN NP+G HG LA A+
Sbjct: 281 ENGGDRGLINLGNTCFLNSSLQCLSKILKFTNYFLSGTFWDHINYCNPVGQHGRLAKAYY 340
Query: 374 DLLRKLWSSGRAA--VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ L ++W + AP+A K ++ +F GY QHDSQELLAFLLDGLHEDLN +++
Sbjct: 341 ETLLEMWKINKKGKPYAPKALKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQK 400
Query: 432 KPYIEMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPY E K GG RPD EVA WK HK N+S+IVD+FQGQY+S L CP C+K+SITFD
Sbjct: 401 KPYYEEKLQGGLDRPDIEVAEASWKRHKEINNSIIVDLFQGQYRSRLQCPQCNKLSITFD 460
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
PFMYL++PLP + V + + + F+
Sbjct: 461 PFMYLSIPLPPKKNHRIWFHVMLSREVQISLRFS 494
>gi|341889009|gb|EGT44944.1| hypothetical protein CAEBREN_17498 [Caenorhabditis brenneri]
Length = 1056
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 168/298 (56%), Gaps = 7/298 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L ++FL + Y EIN NPLG G LA AF D +
Sbjct: 453 GYTGLRNIGNTCFMNAILQMLVNNVELREFFLREHYQSEINESNPLGSEGRLARAFADFM 512
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++WS A+ P K +A A QF+ + QHD+ E L+FLLDGLHED+NRVK+KP
Sbjct: 513 QQMWSGRHKAIEPIQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTG 572
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GR D +V+NE W+NH RNDS+ VD+F GQ KS + CP C +VSITFDPF+YL +
Sbjct: 573 TVESHGRHDLDVSNEAWRNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPV 632
Query: 497 PLPSTVTRTMTVTVFYA-NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
P P + T +F+ P TV+ G D + A+S + L E
Sbjct: 633 PFPK--RKKSTSLIFWPLENQAKPYKLTVSYSTEGTVADFLSAVSEVVKVP-SRNLRACE 689
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK--IKLEIVNRWQEKSASDYL 611
H+ R + + ++ I D V D + + + L ++ R +S+ Y+
Sbjct: 690 ALCHRFDRIYTSDMKVSDIISPDYLFVFQVHDESECNESVVILHVLQRELYRSSLKYV 747
>gi|336268250|ref|XP_003348890.1| hypothetical protein SMAC_01914 [Sordaria macrospora k-hell]
Length = 1413
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 163/264 (61%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L +YFL + EIN ENPL +G++AL
Sbjct: 331 RSGRTPGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINAENPLSHNGDVAL 390
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + +VAPR FK + R+A FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 391 AYMRLLDEIYKNPAPNSVAPRHFKSIVGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRI 450
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS G P +E+A++ W K R+DS+I D+F G YKSTL CPVC K
Sbjct: 451 KKKPYIEKPDSTDDMIGNPAAIKEMADKVWDITKKRDDSIIADLFTGMYKSTLHCPVCDK 510
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+SITFDPF LTLPLP + + TV + N P+ V + K K + +ST
Sbjct: 511 ISITFDPFNNLTLPLPMSNVWSRTVKYYPLNEP--PVEIVVEVDKTSAFKAIKEFISTRV 568
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ E + + F+ +++
Sbjct: 569 GVP-PERLVGGEEFKGKFFKQYDD 591
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 725 VLLDWTDDVHE-LYDP---SYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTE 775
+++DW +D + ++ P +Y K + ++ KK ++E ISL CL F E
Sbjct: 958 IVVDWYEDAFDTVFSPANRTYNK-IEALNDPSLGAKKRQRELRKKNGISLDDCLAEFEKE 1016
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS + ++KLD V+FPI
Sbjct: 1017 EILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVGWRRDKLDVLVDFPIEG 1076
Query: 836 LDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDL+ + + +DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 1077 LDLTERVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1116
>gi|380094149|emb|CCC08366.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1414
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 163/264 (61%), Gaps = 11/264 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELAL 370
+ G G GLQNLGNTC+MNSALQCL +L +YFL + EIN ENPL +G++AL
Sbjct: 332 RSGRTPGCVGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINAENPLSHNGDVAL 391
Query: 371 AFGDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + +VAPR FK + R+A FSGY Q DSQE L FLLDGL EDLNR+
Sbjct: 392 AYMRLLDEIYKNPAPNSVAPRHFKSIVGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRI 451
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS G P +E+A++ W K R+DS+I D+F G YKSTL CPVC K
Sbjct: 452 KKKPYIEKPDSTDDMIGNPAAIKEMADKVWDITKKRDDSIIADLFTGMYKSTLHCPVCDK 511
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+SITFDPF LTLPLP + + TV + N P+ V + K K + +ST
Sbjct: 512 ISITFDPFNNLTLPLPMSNVWSRTVKYYPLNEP--PVEIVVEVDKTSAFKAIKEFISTRV 569
Query: 544 CLKIDEGLLLAEVYNHQIFRFFEN 567
+ E L+ E + + F+ +++
Sbjct: 570 GVP-PERLVGGEEFKGKFFKQYDD 592
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 725 VLLDWTDDVHE-LYDP---SYIKDLPVVHKTGFTVKKTRQE-----AISLFSCLDAFLTE 775
+++DW +D + ++ P +Y K + ++ KK ++E ISL CL F E
Sbjct: 959 IVVDWYEDAFDTVFSPANRTYNK-IEALNDPSLGAKKRQRELRKKNGISLDDCLAEFEKE 1017
Query: 776 EPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILN 835
E L D WYCP+CKEHR+A+KK DLW PD+LV HLKRFS + ++KLD V+FPI
Sbjct: 1018 EILSEQDTWYCPRCKEHRRASKKFDLWKTPDILVVHLKRFSSVGWRRDKLDVLVDFPIEG 1077
Query: 836 LDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
LDL+ + + +DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 1078 LDLTERVIDKEDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1117
>gi|392891844|ref|NP_001254305.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
gi|387912084|emb|CCH63799.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
Length = 948
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L +YFL + Y EIN NPLG G LA AF D +
Sbjct: 234 GYTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFM 293
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++WS + A+ P K +A A QF+ + QHD+ E L+FLLDGLHED+NRVK+KP
Sbjct: 294 HQMWSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTG 353
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GR D +V+NE WKNH RNDS+ VD+F GQ KS + CP C +VSITFDPF+YL +
Sbjct: 354 TVESHGRHDLDVSNEAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPV 413
Query: 497 PLPSTVTRTMTVTVFYA-NGSGLPMPFTVTLMKHGCCKDLILALS 540
P P + T +F+ P TV+ G D + +S
Sbjct: 414 PFPK--NKQSTDLIFWPLENQTKPYKLTVSYSTEGTVADFLSVVS 456
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
G+ + L LD F E L P++ WYC CKE+ +ATKKL L+ LP VL+
Sbjct: 750 GYVKSNNSETNPHLTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQ 809
Query: 812 LKRFSYSRYL-------KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYG 862
LKRF Y+ + ++K V +P+ +LD+S ++ S S +YDL + H G
Sbjct: 810 LKRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPFLAETSPHPNSTMYDLTGVVCHSG 869
Query: 863 GLGGGHYTAYAKV 875
GHY + ++
Sbjct: 870 NSYFGHYISMGRL 882
>gi|82539196|ref|XP_724005.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478499|gb|EAA15570.1| similar to ubiquitin specific protease 11-related [Plasmodium
yoelii yoelii]
Length = 1098
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 138/214 (64%), Gaps = 5/214 (2%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFG 373
E GG GL NLGNTCF+NS+LQCL YFL G + D IN NP+G HG LA A+
Sbjct: 160 ENGGDRGLINLGNTCFLNSSLQCLSKILKFTNYFLSGTFWDHINYCNPVGQHGRLAKAYY 219
Query: 374 DLLRKLWSSGRAA--VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ L ++W + AP+ K ++ +F GY QHDSQELLAFLLDGLHEDLN +++
Sbjct: 220 ETLLEMWKINKKGKPYAPKVLKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQK 279
Query: 432 KPYIEMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPY E K GG RPD EVA WK HK N+S+IVD+FQGQY+S L CP C+K+SITFD
Sbjct: 280 KPYYEEKLQGGLDRPDIEVAEASWKRHKEINNSIIVDLFQGQYRSRLQCPQCNKLSITFD 339
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
PFMYL++PLP + V + + + F+
Sbjct: 340 PFMYLSIPLPPKKNHRIWFHVMLSRDVQISLRFS 373
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
+E S+ +CL F EE L D+ WYC CK H QA KKLDL+ +P VL+ HLKRF+ S
Sbjct: 906 EEKYSVDTCLKLFSEEEHLDEDNTWYCSNCKLHVQAYKKLDLFRMPIVLILHLKRFNNSN 965
Query: 819 RYLKNKLDTFVNFPILN---LDLS--------KYMKSKDGESY-VYDLFAISNHYGGLGG 866
R+L+ K+D++V +P LD++ K+MKS D +Y+L ++ H GGLGG
Sbjct: 966 RWLRTKIDSYVYYPHKENEYLDMTPYILPDGLKHMKSFDPNYLPLYELIGVNCHTGGLGG 1025
Query: 867 GHYTAYAKVNA 877
GHY AY K+N
Sbjct: 1026 GHYFAYVKLNG 1036
>gi|403357853|gb|EJY78563.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1249
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNSALQCL +T L +YFL + EIN +NPLG G L +
Sbjct: 319 RNGVVGLYNLGNTCFMNSALQCLSNTWALTKYFLEKHFIGEINEDNPLGTKGHLVFQYAK 378
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL +LW+ G P K + + F G QHDSQE L FLLD LHEDLNRV++KPY
Sbjct: 379 LLNELWNKGSDTFTPNQLKNVIGKQNAMFQGNAQHDSQEFLNFLLDTLHEDLNRVQKKPY 438
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E +DS RPDE VA E W H RN S+IVD+FQGQY+STL CP C+++S++FDP+M +
Sbjct: 439 VETQDSNNRPDEVVAKEFWDGHLQRNMSIIVDLFQGQYRSTLKCPNCNRISVSFDPYMSI 498
Query: 495 TLPLPSTVT 503
LP+P T
Sbjct: 499 PLPIPLNFT 507
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF-SYSRYLKNKLD 826
CL+ F E L D+ WYC +CK+H QA+K ++++ +P V++F L+RF S++ Y K+KL+
Sbjct: 959 CLEYFRHTEKLDKDNSWYCNKCKDHVQASKTIEIYSVPPVIIFCLQRFKSHNIYFKDKLE 1018
Query: 827 TFVNFPILNLDLSKYMKSKD--GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ FPI +LD+S ++ SK+ S +YDL+A+SNHYG L GHYTAYAK
Sbjct: 1019 DKIVFPINDLDMSPFVVSKEQKNSSLLYDLYAVSNHYGSLSFGHYTAYAK 1068
>gi|145529976|ref|XP_001450771.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418393|emb|CAK83374.1| unnamed protein product [Paramecium tetraurelia]
Length = 1153
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 1/215 (0%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALA 371
K G+ GL NLGNTCFMNS+LQCL + +L +Y + Y +++N +NPLG G LA
Sbjct: 542 KNSAKGICGLSNLGNTCFMNSSLQCLSNVTELTEYMIYNTYLEDLNEKNPLGTGGRLACN 601
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ +LL++L+ S +VAP K + + APQF+GY+Q DSQELL++LLDGLHED+NR+K+
Sbjct: 602 YAELLKELYESTSTSVAPWNVKKVIGQQAPQFNGYSQQDSQELLSYLLDGLHEDMNRIKK 661
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KPYI + G+ D+E A+ W NHK RNDS I ++F GQ+KS + CP C+ VSITFDPF
Sbjct: 662 KPYIPEVEYKGQSDQEFADIYWDNHKKRNDSKITELFTGQFKSRVECPECNFVSITFDPF 721
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
+ ++LP+PS + + + + P+ TL
Sbjct: 722 VTISLPIPSKEYVQFQFYLIFRDSNQTPLKIQQTL 756
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 11/126 (8%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
Q+ ISL CL+ F EE LG + WYC +CK+H++A K++ ++ P +++ HLKRF +R
Sbjct: 990 QQTISLNDCLNQFCQEEVLGAGNEWYCSKCKKHQKAKKQMQIYKAPQIMILHLKRFRSTR 1049
Query: 820 YLK----------NKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGH 868
+ K+ FV+FP+ N D+ ++ K+ + YVYDLFAISNHYGG+GGGH
Sbjct: 1050 VTQFYGTYSVGGVTKIVQFVDFPLENFDIQPFILEKESQQPYVYDLFAISNHYGGMGGGH 1109
Query: 869 YTAYAK 874
YTAYAK
Sbjct: 1110 YTAYAK 1115
>gi|395536958|ref|XP_003770475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Sarcophilus
harrisii]
Length = 1139
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/625 (27%), Positives = 277/625 (44%), Gaps = 109/625 (17%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALA 371
K G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+
Sbjct: 96 KARPPGTQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGHYRARPG-------RAEVTEQ 148
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
L+R LW+ FK ++++ QF G QHD+ E L +LLD +HEDL+
Sbjct: 149 LAGLVRALWTRDYTPHLSVEFKNTVSKYGSQFQGNLQHDALEFLLWLLDRVHEDLD---- 204
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
S G+ E+ KN ++ S + + FQ QY+S+L CP C K S TFDPF
Sbjct: 205 ------SSSPGQSSEKSQPGPSKNCPSQRQSFVQNHFQAQYRSSLTCPHCQKQSNTFDPF 258
Query: 492 MYLTLPLPSTVTRTMTVTVFYAN--------GSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+ ++LP+PS TR++ VT+ + + G +P+ TV ++ ++ + +
Sbjct: 259 LCVSLPIPSCQTRSLNVTLVFQSKNQRFLRIGLAVPLFSTVATLRKMVAEESKITANEVV 318
Query: 544 CLKI----------DEGLL--LAEVYNHQIFRFFENP----AELISSIKDDEHIVAYRFD 587
+++ DE L ++E N F+ +P S HI ++
Sbjct: 319 LVELSPNGFQRSFFDEEDLNTISEEDNVYAFQASWSPIWGVPATFSDCSSSVHITKHKGQ 378
Query: 588 R-KQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGADID 638
Q G + E W + S + G + K FG PL+ L E+ D
Sbjct: 379 SLPQMGALSTE---SWSSGNGSKVIILLCNLVGSGHKAKRFGPPLL--LREDR--AISWD 431
Query: 639 IAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQL 698
++ + +R + + + S +V L ++CS L
Sbjct: 432 QLRQQVFNKMRY--------------LIKQEVPMQSLGSLFAVRVVGLSNICS-----YL 472
Query: 699 SLTDERISSCKPIQKD-SILKPGK--HIKVLLDWTDDVHELY----DPSYIKDLPVVHKT 751
S D R +++ + KPG HIK+ ++W ++ +L ++D P V
Sbjct: 473 SPQDSRPLFHWAVERSLKLSKPGSPPHIKLAVEWDRNIKQLLFGNIQEEVVRDAPSVQL- 531
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+ +Q + +L C + EE L PDD W CP CK +Q KL LW LPD+L+ H
Sbjct: 532 --QQQAHQQPSCTLNECFQLYTKEEQLAPDDAWKCPHCKVLQQGMVKLSLWTLPDILIIH 589
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GES--------------------- 849
LKRF +NKL T V FP+ L+++ ++ ++ G+
Sbjct: 590 LKRFCQVGGRRNKLSTLVKFPLYGLNMAPHVAKRNFGQECLNSWPSWEQASCLPNSCSFD 649
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G + GGHYTAY +
Sbjct: 650 FLYDLYAVCNHHGSMQGGHYTAYCR 674
>gi|367012327|ref|XP_003680664.1| hypothetical protein TDEL_0C05640 [Torulaspora delbrueckii]
gi|359748323|emb|CCE91453.1| hypothetical protein TDEL_0C05640 [Torulaspora delbrueckii]
Length = 1178
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 195/377 (51%), Gaps = 42/377 (11%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y YNT + + G+ GL NLGNTC+MNSALQCLVH P+L YFL D ++ EIN++NPL
Sbjct: 288 NYFIYNTLQPSQ--GITGLTNLGNTCYMNSALQCLVHIPELRDYFLYDGFTSEINSDNPL 345
Query: 363 GMHGELALAFGDLLRKLW-----SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
G G +A AF L++ L+ S+ A +P FK + FSGY Q DSQE LAF
Sbjct: 346 GYQGNIAKAFSLLVKSLFGASYGSASSQAFSPNNFKMIMGHCNTMFSGYMQQDSQEFLAF 405
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQG 470
LLDGLHEDLNRV KPYIE D +++A + WK H RNDS++ D+F
Sbjct: 406 LLDGLHEDLNRVHDKPYIEKPSLSPNSDVTDRDTIKKLAEDTWKMHLLRNDSIVTDLFVA 465
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
Y+STL CP C VSITFDP+ LTLPLP T V +F N P V + K
Sbjct: 466 LYESTLECPECRNVSITFDPYNDLTLPLPVNTTWHSKVKIFPQNSP--PCILEVEMKKSA 523
Query: 531 CCKDLILALSTACCLKIDEGLLLA-EVYNHQIFRFFENP---------AELISSIKDDEH 580
++ L A +ID L E++NHQ +E+P +ELIS D
Sbjct: 524 SYQE--LKDYVAEYARIDSRYLYGCEIFNHQFCNNYESPDTMSQYLPISELISESDD--- 578
Query: 581 IVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKG-------SERKLFGAPLVTY-LEEE-- 630
++ Y + I + R ++ + L G S +L L+ LE +
Sbjct: 579 VIFYELNASSDDTIVPVLNTRIEDNFNTPQLFGVPFFLVLSPAELHNPSLIRLKLERQYT 638
Query: 631 HLSGADIDIAVSKLLSP 647
HLSG ++ +S + P
Sbjct: 639 HLSGGFLEFPLSSIEQP 655
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 82/117 (70%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR 819
+ AISL CL F +E L +D WYCP CK+HRQATK++ LW PDVL+ HLKRF R
Sbjct: 867 KRAISLHDCLKLFSKKEVLSMNDSWYCPTCKDHRQATKQIQLWSTPDVLLIHLKRFENQR 926
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
+K+D V+FPI +LD+++++ +D +YDL A+ NH+GGLGGGHYTAY K N
Sbjct: 927 SFSDKIDDTVHFPIKSLDMTEHLVHEDPRGSIYDLIAVDNHFGGLGGGHYTAYVKTN 983
>gi|281342720|gb|EFB18304.1| hypothetical protein PANDA_016924 [Ailuropoda melanoleuca]
Length = 1225
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 266/633 (42%), Gaps = 123/633 (19%)
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGELALAF 372
+N GNTCFMN+ LQCL +T A+Y LG Y + E P+G GE+
Sbjct: 1 RNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPVGRGTQGQGEVTEQL 60
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV--- 429
L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 61 AHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLNHAVKQ 120
Query: 430 -KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
Q P ++ P+ C + + ++FQ QY+S+L CP C K S TF
Sbjct: 121 SGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQKQSNTF 172
Query: 489 DPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
DPF+ ++LP+P TR + VTV Y M V + G L A+S + D
Sbjct: 173 DPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMETKIPTD 232
Query: 549 EGLLLAEVYNHQIFR------------------FFENPA-------------ELISSIKD 577
+ ++L E+Y R FE P L S++
Sbjct: 233 Q-IVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNSNLNH 291
Query: 578 DEHIVAYRFDRKQG----GKIKLEIVNRWQEK----SASDYLKGSERKLFGAPLVTYLEE 629
+ + +R Q GKI L +K + G + K FG P V +LE+
Sbjct: 292 LKFALDHRLSSMQAAAKQGKIDLPPTRAENDKIVLLVCNRACTGQQGKRFGLPFVLHLEK 351
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSNSHNESVETAELED 688
D+ ++L ++ FL P V ++ V +
Sbjct: 352 T----IAWDLLQKEILEKMKY--------------FLRPTVCIQVCPFSLRVVSVVGITY 393
Query: 689 LCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY----DPSYIK 743
L +E T ER + SC P H+K++++W + + + YI
Sbjct: 394 LLPQEEKPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETKDFLFVNTEDEYIP 446
Query: 744 DLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLD 800
D V +++ R + +L C + EE L PDD W CP CK+ +Q + L
Sbjct: 447 DAESVR-----LQRERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLS 501
Query: 801 LWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS--------------------- 839
LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 502 LWTLPDVLIIHLKRFRQEGDRRVKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWR 561
Query: 840 -KYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
Y +D E YVYDL+A+ NH+G + GGHYT
Sbjct: 562 RPYGLGRDPEDYVYDLYAVCNHHGTMQGGHYTG 594
>gi|340369302|ref|XP_003383187.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Amphimedon queenslandica]
Length = 1041
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 168/288 (58%), Gaps = 9/288 (3%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRK 378
G+ NLGNTCFM+S LQCL +T ++ +FLG+ Y +IN +NPLG G+LA F ++ K
Sbjct: 412 TGIANLGNTCFMSSILQCLSNTVEVRDFFLGEKYRTDINKDNPLGCQGQLAECFYTMIDK 471
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
LWS A ++PR K + +FSGY Q D+ E F LDGLHEDLNR+K KP
Sbjct: 472 LWSGKMAYISPRKIKDLIGSRRDEFSGYAQQDAHEFTTFFLDGLHEDLNRIKSKPVTAQI 531
Query: 439 DSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
+S GRPD V+ E W N+K RNDS IVD+F GQ+KS LVCP CSK S+TFDPF L++PL
Sbjct: 532 ESDGRPDSVVSEESWSNYKKRNDSFIVDLFGGQFKSLLVCPDCSKESVTFDPFSSLSVPL 591
Query: 499 PSTVTRTMTVTVFYANGSGL--PMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P +++T++V + + L P V+L + + +++T + + + +
Sbjct: 592 P---VKSVTLSVIFISKDPLTPPKEVVVSLSSESTLELVKASVATKTSVTMKNLRVFEVI 648
Query: 557 YNHQIFRFFENPAELISSIKDDEHIV---AYRFDRKQGGKIKLEIVNR 601
N ++ N + +S +KD++ IV F + I+L + R
Sbjct: 649 KNGRLVNMAVNHKKKLSEMKDNDFIVICEVLSFHEAKEKVIELHVTQR 696
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 16/158 (10%)
Query: 727 LDWTDDVHELYDPSYI----KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDD 782
+DW ++ + D S++ KDL + K I L CL F E L ++
Sbjct: 844 MDWRNNPN---DSSWVDVINKDLSAYQSSAKEAIKREGRHIRLKDCLQLFTEPETLPKEN 900
Query: 783 MWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY 841
WYCP+CKEHR+ATK+L + LP +L+ HLKRFS+S + K+D V FP+ LD+S Y
Sbjct: 901 AWYCPRCKEHREATKRLSVSRLPHILIIHLKRFSFSDLTRRTKIDKHVEFPLTGLDMSPY 960
Query: 842 MKS--------KDGESYVYDLFAISNHYGGLGGGHYTA 871
+ + +G +YDL+A NHYG + GHY A
Sbjct: 961 IHTDPSSYTAATNGTPALYDLYATVNHYGAVFAGHYVA 998
>gi|449703350|gb|EMD43820.1| ubiquitin carboxylterminal hydrolase, putative [Entamoeba
histolytica KU27]
Length = 878
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTC+MNSA+QCL+HT L Q+F D + +IN NPLG G+L + LL
Sbjct: 273 GVCGLHNLGNTCYMNSAIQCLIHTTPLVQFFQKDDWKKDINLNNPLGTSGKLVEQWSQLL 332
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
RK WS G + ++P+ FK + FAPQFSGY QHDSQEL+A+L+DG+HEDLNRV +KPY+E
Sbjct: 333 RKYWS-GYSTISPKEFKFAIGEFAPQFSGYQQHDSQELVAYLIDGIHEDLNRVLKKPYVE 391
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D PD+E A W +K RNDS+I D+F Q KS ++C VC ++ FDP+++L+L
Sbjct: 392 TPDYNNEPDDEWAVAEWNRYKQRNDSIITDLFAAQLKSKVICDVCHNTNMRFDPYVFLSL 451
Query: 497 PLPS 500
+P+
Sbjct: 452 AIPN 455
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR- 819
+ ++L C +AF EE + ++ YC +CKEH+ + KK+DLW +L+ HLKRF S
Sbjct: 690 DPVTLEECFEAFEVEELMDENNKVYCSKCKEHQPSHKKVDLWSTNQILIIHLKRFGNSNG 749
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHYTAYAKV 875
Y ++K+ TFV+FPI +LDL++++K D + +Y+L+ ++NH G LGGGHY A A+V
Sbjct: 750 YSRDKITTFVDFPIESLDLTRFVKHYDPTTPPIYNLYGVTNHMGSLGGGHYVASARV 806
>gi|67481657|ref|XP_656178.1| ubiquitin carboxyl-terminal hydrolase [Entamoeba histolytica
HM-1:IMSS]
gi|56473365|gb|EAL50794.1| ubiquitin carboxyl-terminal hydrolase, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 880
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTC+MNSA+QCL+HT L Q+F D + +IN NPLG G+L + LL
Sbjct: 273 GVCGLHNLGNTCYMNSAIQCLIHTTPLVQFFQKDDWKKDINLNNPLGTSGKLVEQWSQLL 332
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
RK WS G + ++P+ FK + FAPQFSGY QHDSQEL+A+L+DG+HEDLNRV +KPY+E
Sbjct: 333 RKYWS-GYSTISPKEFKFAIGEFAPQFSGYQQHDSQELVAYLIDGIHEDLNRVLKKPYVE 391
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D PD+E A W +K RNDS+I D+F Q KS ++C VC ++ FDP+++L+L
Sbjct: 392 TPDYNNEPDDEWAVAEWNRYKQRNDSIITDLFAAQLKSKVICDVCHNTNMRFDPYVFLSL 451
Query: 497 PLPS 500
+P+
Sbjct: 452 AIPN 455
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR- 819
+ ++L C +AF EE + ++ YC +CKEH+ + KK+DLW +L+ HLKRF S
Sbjct: 692 DPVTLEECFEAFEVEELMDENNKVYCSKCKEHQPSHKKVDLWSTNQILIIHLKRFGNSNG 751
Query: 820 YLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHYTAYAKV 875
Y ++K+ TFV+FPI +LDL++++K D + +Y+L+ ++NH G LGGGHY A A+V
Sbjct: 752 YSRDKITTFVDFPIESLDLTRFVKHYDPTTPPIYNLYGVTNHMGSLGGGHYVASARV 808
>gi|325183266|emb|CCA17724.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
gi|325183912|emb|CCA18370.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 1801
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 172/292 (58%), Gaps = 19/292 (6%)
Query: 311 AKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELA 369
A++ GG GL NLGNTC+MNSALQCL +T LA+YFL G Y D+IN + LG+ G+LA
Sbjct: 1032 ARRMRSGGSVGLCNLGNTCYMNSALQCLCNTQLLAEYFLSGMYLDDINRTSTLGLQGKLA 1091
Query: 370 LAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+G L +W + + +++PR FK + +F F G +Q D+QELLAFLL GL EDLNR+
Sbjct: 1092 QVYGKLAEDMWCAKQKSISPRHFKKTIGKFNDAFRGNDQQDAQELLAFLLSGLSEDLNRI 1151
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
+KPY++ DS GR D ++A+E W+NH R S+IV +F GQYKS L C C S F+
Sbjct: 1152 TEKPYVDQPDSDGRYDSDLADEWWRNHLRREVSIIVALFTGQYKSLLTCMDCGFKSARFE 1211
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSG-------LPMPFTVTLMK----HGCCKDLILA 538
PF +L +PLP T+T+ + +NG L + TV +K H C +L +A
Sbjct: 1212 PFTFLQVPLPEPTHTTVTLVLVLSNGMQPTKISIRLEIAATVFDLKKEIVHLCTTELDVA 1271
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
T +KI E Y+ + ++ + I I+ +H++A++ + Q
Sbjct: 1272 NVTESDIKISE-------YSGSMIISYKADSRRIGQIRSIDHLMAFQLEAVQ 1316
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 71/158 (44%), Gaps = 49/158 (31%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L CL F EE + YC C +H + TKKL++W LP V+V HLKRF Y++ +
Sbjct: 1573 VPLTRCLQDFTAEELIHEG---YCSSCCKHLEMTKKLEIWRLPPVMVIHLKRFQYTQTYR 1629
Query: 823 NKLDTFVNFPILNLDL-----------SKYMKSKDGESYV-------------------- 851
KL + V FPI LDL +Y KD E V
Sbjct: 1630 RKLLSLVEFPIAELDLGPCVAPHVEFPERYPMKKDTEEPVNETEMNEEARLRAVNRSHRG 1689
Query: 852 ---------------YDLFAISNHYGGLGGGHYTAYAK 874
YDL+ + NH+G LGGGHYTA+AK
Sbjct: 1690 YTNTNLDQSRCLETLYDLYGVVNHHGALGGGHYTAFAK 1727
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 39 DLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDII 98
+L E + ++++S +++ +W RYV G + D RP IDNSD++
Sbjct: 885 NLIEDDQWYILSRKFFLAWSRYV-GLQTQKD----------AKQDATGTRPAKIDNSDLL 933
Query: 99 QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGPALPRKMIS 149
N L+ + + G D+ ++P+Q+W L WY GGP LP K+I+
Sbjct: 934 DNAQSPPV---LKAKDQIHLGVDFEVIPEQLWNALKLWYSGGPELPCKVIT 981
>gi|167377770|ref|XP_001734533.1| ubiquitin carboxyl-terminal hydrolase [Entamoeba dispar SAW760]
gi|165903900|gb|EDR29290.1| ubiquitin carboxyl-terminal hydrolase, putative [Entamoeba dispar
SAW760]
Length = 891
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 128/184 (69%), Gaps = 2/184 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTC+MNSA+QCL+HT L Q+F D+ EIN NPLG G+L + LL
Sbjct: 273 GVCGLHNLGNTCYMNSAIQCLIHTIPLVQFFQKEDWKKEININNPLGTSGKLVEQWYQLL 332
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
K WS G + + PR FK + FAPQFSGY QHDSQEL+A+L+DG+HEDLNRV +KPYIE
Sbjct: 333 IKYWS-GYSTITPREFKYAIGEFAPQFSGYQQHDSQELVAYLIDGIHEDLNRVLKKPYIE 391
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D PD E A W +K RNDS+I D+F Q KS ++C VC +++ FDP+++L+L
Sbjct: 392 TPDYNNEPDNEWAIAEWNRYKQRNDSIITDLFAAQLKSKVICDVCHNINMRFDPYVFLSL 451
Query: 497 PLPS 500
+P+
Sbjct: 452 AIPN 455
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
+ +T + ++L C + F EE + ++ YC +CKEH+ + KK+DLW +L+ H
Sbjct: 694 SYHYNQTDGDPVTLEECFETFEAEELMDENNKVYCSKCKEHQLSHKKVDLWSTNQILIIH 753
Query: 812 LKRFSYS-RYLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHY 869
LKRF S Y ++K+ TFV+FPI +LDL++++K D + +Y+L+ ++NH G LGGGHY
Sbjct: 754 LKRFGNSCGYSRDKITTFVDFPIESLDLTRFVKHYDPTTPPIYNLYGVTNHMGSLGGGHY 813
Query: 870 TAYAKV 875
A A+V
Sbjct: 814 VASARV 819
>gi|365982984|ref|XP_003668325.1| hypothetical protein NDAI_0B00480 [Naumovozyma dairenensis CBS 421]
gi|343767092|emb|CCD23082.1| hypothetical protein NDAI_0B00480 [Naumovozyma dairenensis CBS 421]
Length = 1253
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 184/367 (50%), Gaps = 39/367 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTC+MNSALQC+ H P YFL G + E+N NPLG G +A AF DL+
Sbjct: 328 GTIGLTNLGNTCYMNSALQCITHIPIFRDYFLYGTFQKEVNEGNPLGYQGYMARAFSDLI 387
Query: 377 RKLWS---SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP 433
+ L+ + A +P FK L F FSGY Q DSQE LAFLLD LHEDLNR+ +KP
Sbjct: 388 QSLFGDNITSTTAYSPSYFKSTLGHFNSMFSGYLQQDSQEFLAFLLDSLHEDLNRIDKKP 447
Query: 434 YIE---MKDSGGRPDEEV----ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
Y+E + + D +V A++ WK H RNDS+I D+F YKSTL CP C S+
Sbjct: 448 YVEKPSLPLTANLNDFDVVKRLADDTWKAHLLRNDSVITDLFVAMYKSTLKCPECQNTSV 507
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDP+ LTLPLP V +F N P V L K DL +S +K
Sbjct: 508 TFDPYNDLTLPLPVASIWHTKVKIFPLNSP--PCTLEVELAKTSTYLDLKSYISECTGIK 565
Query: 547 IDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVAYRFDRKQGGKIKLEIVN 600
I + L E+++HQ + +E L I D + ++ Y + +I + ++N
Sbjct: 566 I-QNLFGCEIFSHQFYTNYETVESNSQFLPLQELISDQDDVIFYEINIS-NDEIIVPVLN 623
Query: 601 RWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGG 660
E++ S LFG P I ++ S+L +P Y K +
Sbjct: 624 TKVEENF------SRPSLFGVPFF------------ITLSASELDNPCLIRYKLEKCYSN 665
Query: 661 KENGFLP 667
GF+P
Sbjct: 666 LSGGFIP 672
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
P + K K + I+L CL F E L +D WYCP CKEHRQATK+++LW P
Sbjct: 922 PQLEKLKEQRDKQEERHITLDDCLKLFSKPEILSSNDSWYCPHCKEHRQATKQIELWNTP 981
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGL 864
D+L+ HLKRF R +K+ V FPI + D+S+++ K D VYDL A+ NHYGGL
Sbjct: 982 DILLIHLKRFENQRSFSDKIVDTVFFPITDFDISEHLVYKEDPRGNVYDLIAVDNHYGGL 1041
Query: 865 GGGHYTAYAK 874
GGGHYTAYAK
Sbjct: 1042 GGGHYTAYAK 1051
>gi|407929035|gb|EKG21874.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 1470
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 268/586 (45%), Gaps = 96/586 (16%)
Query: 90 GPIDNSDIIQNGNGSSEGDDLE---------VRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
GP++N + + E D + ++ L+ G+DY + P++ W + WY
Sbjct: 137 GPVNNEPLFDQDASAWEQDHVSESSGQLFVPMKPGLQLGEDYEVFPEEAWNLMVEWYGVK 196
Query: 141 PALP------RKMISEG-IVNEKRVEVFXLCLKLIDSR------------DNSQTVIRL- 180
P +P R G + + E++ L + R DNS +RL
Sbjct: 197 PGVPPIIRYARDTAPPGSTLQNVQYEIYPPFLTIRKLRNDSEPMSAQKIKDNSSNAVRLL 256
Query: 181 -SKKASTRQLYEKVCKLRGIEQE-KARIWDYFN--------------------KQRSTSP 218
S+ + ++ + GI K +IW R++SP
Sbjct: 257 SSRSEKFQDFLKRAKEAAGIPMSTKVQIWRVLEPIQAGVTGQQANRAEVLTPATSRNSSP 316
Query: 219 ---------LDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLT 269
+DV+ T AM + Q +++ + + + + LV + S S L
Sbjct: 317 ARTPPTPLLIDVATFT---AMAEGTQREMVDHKDETNNPKYNGSAKMDLVGL--STSQLI 371
Query: 270 I----AGGPA-----------LSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD-SYNTAKK 313
I GGPA +++ H ++ P S S G + K
Sbjct: 372 ILEEQIGGPAGGEFVSDNARKVASKHGVSLSTSKIPDSKGDSGRSSPAPGGPMTRGRTKN 431
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAF 372
G G GL NLGNTC+MNSALQC+ +L YFL + +E+N +NPLG G +A A+
Sbjct: 432 GRTRGTVGLSNLGNTCYMNSALQCIRSVEELTAYFLQSKFKEELNVDNPLGHGGSIAKAY 491
Query: 373 GDLLRKLWSS-GRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL ++ + AP+ FK L R P FSGY Q DSQE L+FL+DGLHEDLNR+ +
Sbjct: 492 AGLLAAIYGEDATTSFAPKNFKFALGRAQPMFSGYGQQDSQEFLSFLVDGLHEDLNRIIK 551
Query: 432 KPYIEMKDS--GGRPDEEVANECWKN----HKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
KPYIE DS D E + H+ARNDS+ +D+F G YK+T+VCP C KVS
Sbjct: 552 KPYIENPDSDDNTHKDPEAIKALGEKYREIHRARNDSIAMDLFNGFYKNTMVCPECDKVS 611
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH---GCCKDLILALSTA 542
ITFDP+ LTL LP + + TV + G P+ V + + K+ I A
Sbjct: 612 ITFDPYSSLTLQLP--IEKNWQHTVTFMPLVGRPVQIDVDVDPNRPISAVKEYIAARYRE 669
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYRFD 587
+ ++++E+Y+H+ ++ FE+ ++ SSI++ + I+AY D
Sbjct: 670 HSVDPRR-IMMSEIYSHKFYKHFEDRQSIVESSIQERDEIIAYELD 714
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I+L C E L ++ WYC +CKE R+A+K L++W PD+LV HLKRF +R
Sbjct: 1116 GITLEDCFAETAKTEILSEENAWYCNRCKELRRASKTLEIWTAPDILVVHLKRFGANRGF 1175
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++K+D V+FPI LD+++ + +G+ VYDLFA+ NH+GGLGGGHYTA AK
Sbjct: 1176 RDKVDILVDFPIEGLDITERVGLSEGKPLVYDLFAVDNHFGGLGGGHYTAVAK 1228
>gi|407039721|gb|EKE39784.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 882
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL NLGNTC+MNSA+QCL+HT L Q+F D + +IN NPLG G+L + LL
Sbjct: 273 GVCGLHNLGNTCYMNSAIQCLIHTIPLVQFFQKDDWKKDINLNNPLGTSGKLVEQWSQLL 332
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
RK WS G + ++P+ FK + FAPQFSGY QHDSQEL+A+L+DG+HEDLNRV +KPY+E
Sbjct: 333 RKYWS-GYSTISPKEFKFAIGEFAPQFSGYQQHDSQELVAYLIDGIHEDLNRVLKKPYVE 391
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D PD+E A W +K RNDS+I D+F Q KS ++C VC ++ FDP+++L+L
Sbjct: 392 TPDYNNEPDDEWAVAEWNRYKQRNDSIITDLFAAQLKSKVICDVCHNTNMRFDPYVFLSL 451
Query: 497 PLPS 500
+P+
Sbjct: 452 AIPN 455
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
++ +T + ++L C +AF EE + ++ YC +CKEH+ + KK+DLW +L+ H
Sbjct: 685 SYSYNQTDGDPVTLEECFEAFEVEELMDENNKVYCSKCKEHQPSHKKVDLWSTNQILIIH 744
Query: 812 LKRFSYSR-YLKNKLDTFVNFPILNLDLSKYMKSKDGES-YVYDLFAISNHYGGLGGGHY 869
LKRF S Y ++K+ TFV+FPI +LDL++++K D + +Y+L+ ++NH G LGGGHY
Sbjct: 745 LKRFGNSSGYSRDKITTFVDFPIESLDLTRFVKHYDPTTPPIYNLYGVTNHMGSLGGGHY 804
Query: 870 TAYAKV 875
A A+V
Sbjct: 805 VASARV 810
>gi|308510440|ref|XP_003117403.1| hypothetical protein CRE_02121 [Caenorhabditis remanei]
gi|308242317|gb|EFO86269.1| hypothetical protein CRE_02121 [Caenorhabditis remanei]
Length = 1140
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 167/304 (54%), Gaps = 13/304 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L ++FL D Y EIN NPLG G LA AF D +
Sbjct: 422 GHTGLRNIGNTCFMNAILQMLVNNIELREFFLRDHYQSEINESNPLGSEGRLARAFADFM 481
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++WS A+ P K +A A QF+ + QHD+ E L+FLLDGLHED+NRVK+KP
Sbjct: 482 HQMWSGRHKAIEPIQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTG 541
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK------VSITFDP 490
+S GR D +V+NE WKNH RNDS+ VD+F GQ KS + CP C + VSITFDP
Sbjct: 542 TVESHGRHDLDVSNEAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSFFFSVSITFDP 601
Query: 491 FMYLTLPLPSTVTRTMTVTVFYA-NGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
F+YL +P P + T +F+ P TV+ G D + A+S +
Sbjct: 602 FVYLPVPFPK--RKKSTSLIFWPLENQAKPYKLTVSYSTEGTVADFLSAVSEVVRVP-SR 658
Query: 550 GLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK--IKLEIVNRWQEKSA 607
L E H+ R + + ++ I D V D + + + L +V R +S+
Sbjct: 659 NLRACEALCHRFDRIYTSDMKVSDIISPDYLFVFQTHDESECNEEVVVLHVVQRELYRSS 718
Query: 608 SDYL 611
Y+
Sbjct: 719 LKYI 722
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ F + + L L F E L P++ WYC CKEH +ATK+L L+ LP VL+
Sbjct: 941 SSFERSNNSESSPHLTQMLGLFSETERLKPEESWYCSTCKEHVEATKRLQLYRLPPVLII 1000
Query: 811 HLKRFSY-------SRYLKNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHY 861
LKRF Y S + ++K + V +P+ +LD+S ++ S + S +YDL + H
Sbjct: 1001 QLKRFVYTAFTHQASMHRRSKDERTVEYPLESLDMSPFLSDTSPNHNSTIYDLTGVVCHN 1060
Query: 862 GGLGGGHYTAYAKV 875
G GHY + ++
Sbjct: 1061 GSSYFGHYVSLGRL 1074
>gi|403351484|gb|EJY75236.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 697
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Query: 299 MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEIN 357
+ + D +D + + + GL GL+NL N+C+MNS++QCL HT L YFL G + +E+N
Sbjct: 337 IHIKDDWDEFCIKSQHARMGLTGLKNLRNSCYMNSSIQCLSHTIGLTNYFLNGYFKNELN 396
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLG G+LA++F LL++LW + ++AP FK + +FA F+ Y Q DSQELL F
Sbjct: 397 FKNPLGAQGQLAISFAKLLKQLWYDDKHSLAPWQFKKTIGKFAKAFNNYEQQDSQELLNF 456
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
+LDGLHEDLNRV++KP + + G DE AN W+N RN S+IVD+ GQ+KST+
Sbjct: 457 ILDGLHEDLNRVQEKPIVPQIECEGFNDELDANLSWQNFLKRNQSIIVDLMHGQFKSTVR 516
Query: 478 CPVCSKVSITFDPFMYLTLPLP 499
CP C KVSITFDP+M ++LP+P
Sbjct: 517 CPDCDKVSITFDPYMSISLPIP 538
>gi|410080616|ref|XP_003957888.1| hypothetical protein KAFR_0F01560 [Kazachstania africana CBS 2517]
gi|372464475|emb|CCF58753.1| hypothetical protein KAFR_0F01560 [Kazachstania africana CBS 2517]
Length = 1171
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 196/656 (29%), Positives = 288/656 (43%), Gaps = 116/656 (17%)
Query: 23 DEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVS 82
+E RQIV DL Q + KEG+ ++I WY ++ D
Sbjct: 65 NERRQIVLDLLEQYKVIAKEGDKVYIIPKFWYDNFFNEDVTD------------------ 106
Query: 83 SKRAERPGPIDNSDIIQNGNGS--SEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY--- 137
E GPID + I ++ + + DD Y+ VP+ ++ +L W+
Sbjct: 107 ---PELLGPIDTTLICRDYDNFFLKDYDDCP----------YISVPESIFLQLVEWHGLS 153
Query: 138 -KGGPALPRKMISEG---IVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKV 193
P ++ E ++ E ++F LID N + R ++ A+ + +
Sbjct: 154 SNSEPVQTNLVLDEATNTLITEYN-KLFYRVQYLIDP--NEKPYTRNTRNANNINFF-TI 209
Query: 194 CKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTG 253
L + + + + F + S +D + + A M++ I
Sbjct: 210 STLSTLTEAANKALNIFFELESNLNIDSTSVRIWLATTSMEESI--------------HK 255
Query: 254 NDLALVPI-----EPSRSSLTIAGGPALSNGHTTGYRF---------NQYPGSSFGSTFM 299
++ L PI +P G L + TTG F N + S++
Sbjct: 256 SNYLLGPIDFLSYQPKIHVTKDLFGKQLRDLSTTGGNFIIEVKQIDKNYHWVSNYFK--- 312
Query: 300 DMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINT 358
Y+ ++ AK G GL NLGNTC+MNSALQCLVH P L YFL Y E+NT
Sbjct: 313 -----YNDFHHAK-----GTMGLSNLGNTCYMNSALQCLVHIPQLRDYFLYSAYEAELNT 362
Query: 359 ENPLGMHGELALAFGDLLRKLW------SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQ 412
+N +G G +A AF L++ L+ ++ P FK + F FSGY Q DSQ
Sbjct: 363 DNLIGYKGYVAKAFSSLVQNLFGDTITKQGTNSSFGPNHFKSTVGHFNSMFSGYLQQDSQ 422
Query: 413 ELLAFLLDGLHEDLNRVKQKPYIE---MKDSGGRPDEEV----ANECWKNHKARNDSLIV 465
E LAFLLD LHEDLNR+ KP E +K+ D V A+E WK H RNDS+I
Sbjct: 423 EFLAFLLDSLHEDLNRIINKPSTEKPSLKEGDDYNDPAVIKSLADETWKMHLLRNDSVIT 482
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT 525
D+F G YKSTL CP C+ VSITFDP+ LTLPLP T + V +F N P +
Sbjct: 483 DLFVGMYKSTLECPECTNVSITFDPYSDLTLPLPVDSTWSSKVRIFPQNSP--PCILEIE 540
Query: 526 LMKHGCCKDLILALSTACCLKID-EGLLLAEVYNHQIFRFFENPAE------LISSIKDD 578
L K+ +D L A C ++D E L EV+++Q + FE+ L I +
Sbjct: 541 LSKNSTYQD--LKNYVAKCAQMDSEDLYGCEVFSYQFYNNFESAESNSQFLPLKDLISES 598
Query: 579 EHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
+ +V Y R + + I+N E+ ++ LFG P L +E L+
Sbjct: 599 DVVVFYELPRTAEDDVIVPILNTRIEEGF------NKSHLFGVPFFIVLSQEELNN 648
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I+L CL+ F E LG +D WYCP CKEHRQA+K++ LW PDVL+ HLKRF R
Sbjct: 872 ITLNDCLNLFSKREVLGLNDSWYCPHCKEHRQASKRIQLWNTPDVLLIHLKRFENQRSFS 931
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
+K+D VNFPI NLD+S Y+ KD VYDL+A+ NHYGGLGGGHYTAY K
Sbjct: 932 DKIDATVNFPIENLDMSPYLVHKDDPRGTVYDLYAVDNHYGGLGGGHYTAYVK 984
>gi|393906038|gb|EJD74155.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1029
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 161/269 (59%), Gaps = 4/269 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMNS+LQ LV+ +L YF G Y +IN NPLG G LA F + +
Sbjct: 327 GFTGLRNIGNTCFMNSSLQMLVNCKELQIYFSGGYYKKDINVMNPLGFGGRLAEVFAEFM 386
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++W+ A P K +A A QF+ + QHD+ E L+F+LDGLHEDLNRV+ KP
Sbjct: 387 KQMWNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGLHEDLNRVRVKPTTN 446
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ GRPD EV+ E W NH RNDS+ VD+F GQ KS L CP C+++SITFDPF YL +
Sbjct: 447 TIEAEGRPDIEVSREAWHNHLLRNDSIFVDLFHGQLKSRLQCPKCNQISITFDPFAYLAV 506
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P P R+ TV + + P+ V G +++ ALS + + + + EV
Sbjct: 507 PFPKE-KRSSTVYFWPLDPCLKPVRIVVRYNADGKISEVLDALSRLVNVN-PKSMRMVEV 564
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYR 585
NH+I R + NP + +++I + I ++
Sbjct: 565 NNHRIVRAY-NPDDSVNNILTTDTIYVFQ 592
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-- 821
SL+ L F E L P++ WYC +CKEH +ATK+L L+ LP +L+ LKRF Y+ L
Sbjct: 855 SLYDMLAMFSETERLKPEESWYCSRCKEHVEATKQLILYRLPPILIIQLKRFIYTTSLMT 914
Query: 822 ---KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K D V +P+ NLDL++++ + G+ YDL + H G GHY + A++
Sbjct: 915 IHRRSKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLARL 973
>gi|145524463|ref|XP_001448059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415592|emb|CAK80662.1| unnamed protein product [Paramecium tetraurelia]
Length = 975
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 256/551 (46%), Gaps = 66/551 (11%)
Query: 25 ERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSK 84
E QI+Q +QS + ++L+ST+W W+ YV DE I D P S+
Sbjct: 25 EYQILQVALSQS-FQSDANDEFYLLSTKWLNQWKNYVSYDE-----IVADKP-----PSE 73
Query: 85 RAERPGP-IDNSDIIQNGNGSSEGDDLE-------VRRNLEEGQDYVLVPQQVWEKLFCW 136
R P I N+D+ N + + L +++ L+E DYV++ +++W+
Sbjct: 74 YFGRITPDIINNDLQDNVLINFKYYPLSNHPWNKFIKQGLQEIFDYVVIDKKIWKFFTDS 133
Query: 137 YKGGPALPRKMISEGIVNEKRVEVF-----XLCLKLIDSRDNSQTVIRLSKKASTRQ--- 188
Y G P + K+ ++ K + ++ +CL + S V+++ + +
Sbjct: 134 YNGIP-INSKLADVNLLRFKSILLYPAIIKQICLGRMQSPTFDNEVMQVDRNMKFKDYQS 192
Query: 189 -LYEKVCKLRG--IEQEKARIWDYFNKQRSTSPL---DVSDQTL-----DDAMLQMDQDI 237
+ + V G + RIW Y Q+ +++ Q D+ + ++
Sbjct: 193 LIQKTVYTFVGNFAKDSSVRIWRYITDQKDQYQALYDEINKQVCYLESQDEMSFYFNGEL 252
Query: 238 LLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNG---HTTGYRFNQYPGSSF 294
L Q D+ + T L + + I G + Y+ Q+P
Sbjct: 253 LTHQQYDSIKDIGITETHLIVFEFKTEDQPWCIRNQAVQREGECQYCHAYKVLQFPCLCQ 312
Query: 295 GSTF-------------------MDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSAL 335
+ + DD Y T + G+ GLQNLGNT F+NS
Sbjct: 313 KVAYCQEECKQKDYKSHLSNCEKLGSDDESVKYLTLAQSSIKGIVGLQNLGNTSFLNSGT 372
Query: 336 QCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKG 394
QC+ ++ L +YFL + Y DEIN ENP+G G+L G L++++W + P +K
Sbjct: 373 QCISNSFPLVEYFLKNLYFDEINLENPIGTRGQLVKKLGSLIKRMWCGDSKMIVPTDYKK 432
Query: 395 KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWK 454
+ +F P FSGY+ HDS EL+ +LDG+HEDLNRVK+K I+ KD GRPD +A E W
Sbjct: 433 AVEQFYPVFSGYHMHDSAELITAILDGIHEDLNRVKKKLQIQNKDYDGRPDFVIAKESWL 492
Query: 455 NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN 514
NH ARN S+IVD+ G K TL CP C +VSITF P++ + L +P+ T++ FY +
Sbjct: 493 NHLARNQSIIVDLINGLQKFTLKCPTCQQVSITFQPYLIVELDIPTQKKTTISFK-FYED 551
Query: 515 ---GSGLPMPF 522
+ + +PF
Sbjct: 552 LFKSTQMTIPF 562
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 19/162 (11%)
Query: 732 DVHELYDPSYIKDLPVVH-KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCK 790
D+ E Y+ Y ++ V + +K+ Q ++L+ CL + L ++ WYC CK
Sbjct: 766 DMFEYYNKLYKLEVQVQNIGNSLINQKSSQRNVTLYDCLQYSQMPQQLNKENTWYCKICK 825
Query: 791 EHRQATKKLDLWMLPDVLVFHLKRF-SYSRYLKNKLDTFVNFPILNLDLSKYM------- 842
+H +A + + ++ P +L+F L RF + ++ K K++ VNFPI NLD++ Y+
Sbjct: 826 QHVKAFQSVQIYKAPQLLIFKLNRFKANNKIFKQKIEDLVNFPINNLDMTDYVINSNTPN 885
Query: 843 ------KSKDGE----SYVYDLFAISNHYGGLGGGHYTAYAK 874
+S +GE +YDL+AISNH+GG G GHYT YAK
Sbjct: 886 EFLKENESNNGEINKKKVIYDLYAISNHFGGQGEGHYTTYAK 927
>gi|389584168|dbj|GAB66901.1| ubiquitin carboxyl-terminal hydrolase 2 [Plasmodium cynomolgi
strain B]
Length = 1359
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 155/270 (57%), Gaps = 10/270 (3%)
Query: 266 SSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKK----GEKGGLAG 321
S T G + S H GY G + G T G+ + K+ + GG G
Sbjct: 275 SGRTGGYGSSSSTAHAQGYTQGYTQGCTQGYT-QGQTQGHSHESMVKQISYIFQHGGDRG 333
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCF+NS+LQCL + YFL G + + IN NP+G HG LA A+ + L +LW
Sbjct: 334 LINLGNTCFLNSSLQCLAKIKKFSNYFLSGTFWNHINYSNPVGQHGRLAKAYYETLIELW 393
Query: 381 SSGRAA--VAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+ + AP+A K ++ +F GY QHDSQELLAFLLDGLHEDLN +++KPY E K
Sbjct: 394 KIDKRSEPYAPKALKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEK 453
Query: 439 DSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
GG +PD +VA W HK N+S+IVD+FQGQY+S L CP C KVSI FDPFMYL++
Sbjct: 454 LQGGLDKPDIDVAEASWNRHKEINNSIIVDLFQGQYRSRLQCPKCKKVSIAFDPFMYLSI 513
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
PLP + V + + M F+
Sbjct: 514 PLPPKKNHRIWFHVILNRDAPIGMRFSCAF 543
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
+E + +CL F EE L ++ WYC CK H QA KKLDL+ +P +L+ HLKRF+ +
Sbjct: 1167 EERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHVQAYKKLDLFRMPIILILHLKRFNNTN 1226
Query: 819 RYLKNKLDTFVNFP------------ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
R+L+ K+D++V +P IL L K S +Y+L ++ H GGL G
Sbjct: 1227 RWLRTKIDSYVYYPHKENEHLNMSPYILEDGLKHMTKMDPHYSPLYELIGVNCHTGGLCG 1286
Query: 867 GHYTAYAKVNA 877
GHY AY K+N
Sbjct: 1287 GHYFAYVKLNG 1297
>gi|366997123|ref|XP_003678324.1| hypothetical protein NCAS_0I03140 [Naumovozyma castellii CBS 4309]
gi|342304195|emb|CCC71982.1| hypothetical protein NCAS_0I03140 [Naumovozyma castellii CBS 4309]
Length = 1201
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 190/355 (53%), Gaps = 34/355 (9%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLR 377
+ GL NLGNTC+MNSALQC+ H P +YFL Y E+NT+NPLG G +A AF +L+R
Sbjct: 320 ITGLVNLGNTCYMNSALQCITHIPVFREYFLYSGYEKELNTDNPLGYQGHVAEAFSELIR 379
Query: 378 KLWSSGR---AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+ +A AP FK + F FSGY Q DSQE LAFLLD LHEDLNR+ +KPY
Sbjct: 380 CLFGDKLVQFSAYAPNHFKATIGHFNSMFSGYLQQDSQEFLAFLLDSLHEDLNRIDKKPY 439
Query: 435 IEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
+E D +++A++ WK H RNDS+I D+F G YKSTL CP C +SIT
Sbjct: 440 VEKPSLPSTADLNDFRIVKKLADDTWKAHLLRNDSVITDLFVGLYKSTLECPECQNISIT 499
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDP+ LTLPLP + +F N P V L K ++L ++T C +I
Sbjct: 500 FDPYNDLTLPLPVKSMWHSHIKIFPLNAP--PCILEVELPKSSSYEELKNYVAT--CAEI 555
Query: 548 DEGLLLA-EVYNHQIFRFFENPAE------LISSIKDDEHIVAYRFDRKQGGKIKLEIVN 600
D L E++N+Q + +E+P L I +++++V Y I + ++N
Sbjct: 556 DPANLFGCEIFNNQFYTNYESPESNSKFLPLQELIAENDNVVFYEL-SINPNDIVVPVLN 614
Query: 601 RWQEKSASD--------YLKGSERKLFGAPLVTYLEEE---HLSGADIDIAVSKL 644
EK ++ +L E ++ L+ Y ++ HLSG I ++L
Sbjct: 615 TKFEKESTRPTYFGIPFFLTLHENEVANPTLIRYKLQQMYFHLSGGFIPFPFTEL 669
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+ + I+L CL+ F E L +D WYCP CKEHRQATK++ LW PDVL+ HLKRF
Sbjct: 892 KNKEITLNDCLNLFSKPEILSLNDSWYCPTCKEHRQATKQIQLWNAPDVLLIHLKRFENQ 951
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ +K+D V FPI + D+S+++ KD VYDL A+ NHYGGLGGGHYTAYAK
Sbjct: 952 QSFSDKIDDVVQFPITDFDISEHLVYKDDPRGNVYDLIAVDNHYGGLGGGHYTAYAK 1008
>gi|312077696|ref|XP_003141417.1| hypothetical protein LOAG_05832 [Loa loa]
Length = 967
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 161/269 (59%), Gaps = 4/269 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMNS+LQ LV+ +L YF G Y +IN NPLG G LA F + +
Sbjct: 265 GFTGLRNIGNTCFMNSSLQMLVNCKELQIYFSGGYYKKDINVMNPLGFGGRLAEVFAEFM 324
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++W+ A P K +A A QF+ + QHD+ E L+F+LDGLHEDLNRV+ KP
Sbjct: 325 KQMWNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGLHEDLNRVRVKPTTN 384
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ GRPD EV+ E W NH RNDS+ VD+F GQ KS L CP C+++SITFDPF YL +
Sbjct: 385 TIEAEGRPDIEVSREAWHNHLLRNDSIFVDLFHGQLKSRLQCPKCNQISITFDPFAYLAV 444
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P P R+ TV + + P+ V G +++ ALS + + + + EV
Sbjct: 445 PFPKE-KRSSTVYFWPLDPCLKPVRIVVRYNADGKISEVLDALSRLVNVN-PKSMRMVEV 502
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYR 585
NH+I R + NP + +++I + I ++
Sbjct: 503 NNHRIVRAY-NPDDSVNNILTTDTIYVFQ 530
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-- 821
SL+ L F E L P++ WYC +CKEH +ATK+L L+ LP +L+ LKRF Y+ L
Sbjct: 793 SLYDMLAMFSETERLKPEESWYCSRCKEHVEATKQLILYRLPPILIIQLKRFIYTTSLMT 852
Query: 822 ---KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K D V +P+ NLDL++++ + G+ YDL + H G GHY + A++
Sbjct: 853 IHRRSKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLARL 911
>gi|268531894|ref|XP_002631075.1| Hypothetical protein CBG02847 [Caenorhabditis briggsae]
Length = 1130
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 141/224 (62%), Gaps = 2/224 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMN+ LQ LV+ +L ++FL D Y EIN NPLG G LA AF D +
Sbjct: 413 GYTGLRNIGNTCFMNAILQMLVNNVELREFFLRDHYKMEINESNPLGSEGRLARAFADFM 472
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++W+ A+ P K ++ A QF+ + QHD+ E L+FLLDGLHED+NRVK+KP
Sbjct: 473 VQMWNGRHKAIEPVHIKNIVSEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTG 532
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+S GR D +V+NE W+NH RNDS+ VD+F GQ KS + CP C +VSITFDPF+YL +
Sbjct: 533 TVESHGRHDLDVSNEAWRNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPV 592
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
P P ++ ++ + P TV+ G D + A+S
Sbjct: 593 PFPKN-KKSTSLYFWPVENQAKPFKLTVSYSAEGTVADFLSAVS 635
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 765 LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL--- 821
L L F E L P++ WYC CKEH +ATK+L L+ LP VL+ LKRF Y+ +
Sbjct: 942 LTQMLSLFSETERLKPEESWYCSTCKEHVEATKRLQLYRLPPVLIIQLKRFVYTAFTHQT 1001
Query: 822 ----KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K D V +P+ +LD+S ++ S S +YDL + H G GHY + ++
Sbjct: 1002 SVHRRSKDDRTVEYPLESLDMSPFLSETSPSHNSTMYDLTGVVCHSGSSYFGHYISLGRL 1061
>gi|402591058|gb|EJW84988.1| ubiquitin carboxyl-terminal hydrolase, partial [Wuchereria
bancrofti]
Length = 963
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 161/269 (59%), Gaps = 4/269 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMNS LQ LV+ +L YF G Y +IN NPLG G LA F + +
Sbjct: 263 GFTGLRNIGNTCFMNSTLQMLVNCKELQVYFSGGYYKRDINVMNPLGFGGRLAEVFAEFM 322
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++W+ A P K +A A QF+ + QHD+ E L+F+LDGLHEDLNRV+ KP
Sbjct: 323 KQMWNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGLHEDLNRVRVKPTTN 382
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ GRPD EV+ E W+NH RNDS+ VD+F GQ KS L CP C+++SITFDPF YL +
Sbjct: 383 TIEAEGRPDIEVSREAWRNHLLRNDSIFVDLFHGQLKSRLQCPKCNQISITFDPFAYLAV 442
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P P R+ TV + + P+ V G +++ ALS + + + + EV
Sbjct: 443 PFPKE-KRSSTVYFWPLDPCLKPVRIMVRYNADGKISEVLDALSRLVNVN-PKSMRIIEV 500
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYR 585
NH+I R + NP + +++I + I ++
Sbjct: 501 NNHRIVRAY-NPDDSVNNILTTDIIYVFQ 528
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 7/119 (5%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-- 821
SL+ L F E L P++ WYC +CKEH +ATK+L L+ LP +L+ LKRF Y+ L
Sbjct: 789 SLYDMLAMFSETERLKPEESWYCSKCKEHVEATKQLVLYRLPPILIIQLKRFIYTTSLMT 848
Query: 822 ---KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K D V +P+ NLDL++++ + + YDL + H G GHY + ++
Sbjct: 849 VHRRSKDDRPVRYPLDNLDLAQFLSDTAPSRQETKYDLTGVVCHSGSSYFGHYISLGRL 907
>gi|298712288|emb|CBJ26739.1| similar to ubiquitin specific peptidase 15 [Ectocarpus siliculosus]
Length = 1360
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 149/248 (60%), Gaps = 7/248 (2%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
G+ NT K G GL NLGNTCFMNS LQCL+ T L+ YF + E+N +NPL
Sbjct: 526 GFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRSQHWKREVNEDNPL 585
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM G++A A+ L WS + V P K ++++AP F+GY QHD+ EL++FLLDG+
Sbjct: 586 GMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGI 645
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNRV +KPY+E DS GR D VA E W+ + RNDS++VD G +S + CP C+
Sbjct: 646 HEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECN 705
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG-LPMPFTVTLMKHGCCKDLILALST 541
S+TFDP+ L+LPLP T M +F+ G PM VTL K +D L T
Sbjct: 706 LSSVTFDPYTSLSLPLPFD-TAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRD----LKT 760
Query: 542 ACCLKIDE 549
A C + ++
Sbjct: 761 AICQRYNQ 768
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 9/127 (7%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
+ ++++ + SC + F E LG ++WYC +CK HRQA+KKLD++ PDVL+ LKRF
Sbjct: 1183 QNERQSVPIDSCFEKFTECEELGQSELWYCSRCKTHRQASKKLDVYSAPDVLIVVLKRFL 1242
Query: 817 YS----RYLKNKLDTFVNFPILNLDLSKYMKSKDGESY-----VYDLFAISNHYGGLGGG 867
++ + KLDT V+FPI LDL++ ++ G + VYDLFA+S H G L G
Sbjct: 1243 FTPGALTVYRQKLDTHVSFPIEGLDLTRNIQRAGGPIFKEAPPVYDLFAVSEHSGSLRAG 1302
Query: 868 HYTAYAK 874
HYTA A+
Sbjct: 1303 HYTAIAQ 1309
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 69/241 (28%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDE---- 65
M E G P P+ +R+++ + L++K+G +++++ ++W++ W +V D+
Sbjct: 1 MSEEGVPAAPPAPEVQREMIAEAMK---LEMKQGQVWYVLGSKWWQLWRAFVRFDDTKEP 57
Query: 66 -PSI-------------DNISFDSPHMNGVSSK-------------------------RA 86
PS D + + + GV+ K RA
Sbjct: 58 PPSAAATESATPSSMDEDGVLVKAEDVAGVAVKADTNEHRVAELSLEEGGNSSGGGGERA 117
Query: 87 ----ER--PGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
ER PGPIDN + G+ E+R L EG+DYVL+ + +E L WY GG
Sbjct: 118 SSFTERAGPGPIDNRTL---------GEGRELRETLMEGEDYVLLHNRAYELLEAWYGGG 168
Query: 141 PALPRKMISEG--IVNEKRVEVFXL------CLKLIDSRDNSQTVIRLSKKASTRQLYEK 192
P R ++S G + VE+F + CL + ++S +V S+ + RQ+
Sbjct: 169 PRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVSVQLYSRAKTMRQICAD 228
Query: 193 V 193
V
Sbjct: 229 V 229
>gi|145508285|ref|XP_001440092.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407298|emb|CAK72695.1| unnamed protein product [Paramecium tetraurelia]
Length = 1029
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 265/531 (49%), Gaps = 55/531 (10%)
Query: 24 EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP----------------S 67
E+ Q+++ + + D ++G +LI T W++ W +YV ++P
Sbjct: 128 EQFQLLEKEEKELDYFSQDGLYSYLIPTAWFQKWRQYVRNEDPLVLEDPILGLNVAKLRQ 187
Query: 68 IDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ-------NGNGSSEGDDLEVRRNLEEGQ 120
I N++ DS ++ + PGPID+S ++Q + S + + +R +L EG
Sbjct: 188 ILNLNEDS-----INEEIVVAPGPIDSSRLLQVQWNLLPDPTESKQYLNYVLRNDLREGV 242
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQ-TVIR 179
D+ V +V+ + F G + R ++ + + V++ +++I + Q + +
Sbjct: 243 DFFHVSAKVF-RFFEKIYGAIMVKRLIVKQEDQDRAIVDLVPRVVEIIIMENQQQESSLS 301
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
++ ++L K+ ++G + + R W + + Q S LD A L+ + I L
Sbjct: 302 VNGFEQVKELTRKINVIKG-NKNQIRWWKFKDLQ---SQLDWMALIQKGAFLKNIKAIEL 357
Query: 240 EVQ--VDNGISMDSTGNDLALVPIEPSRS-SLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
+++ +D+ ++ T D+ + I+ + LT + ++ S+
Sbjct: 358 DLKTKIDD---LNLTTQDVLICEIKQDKGMQLTAEVNVDQQKEQNVSELYKKFGISNIPK 414
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
+ K G+ GLQNLGNTCFMN+ALQCL +T + +Y + ++
Sbjct: 415 IVSEC--------------KRGMTGLQNLGNTCFMNAALQCLSNTYEFTEYMVYNHFAKH 460
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N N LG G LA ++ +L++ +W + +V+ K + + APQF GY Q DS E L
Sbjct: 461 LNPNNVLGTKGFLAASYAELMKSIWFANYQSVSAIELKKVIGKCAPQFYGYGQQDSHEFL 520
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
++LLDGLHEDLNRV KP + + D++ + + W N+ RN S I ++ GQYKST
Sbjct: 521 SYLLDGLHEDLNRVLNKPIVSDIEITNESDQQASEKFWTNYTLRNQSRIQELMVGQYKST 580
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
LVCP+C+++S TFDPFM L+LP+P+ +++ YA+ +P ++ L
Sbjct: 581 LVCPLCNRISKTFDPFMSLSLPVPNFQIYAVSLYFLYADNEIMPSKISLQL 631
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 12/118 (10%)
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSR-------Y 820
C AF EE LG D WYC +CK+H QA+KK++++ P +L+ HLKRF ++ +
Sbjct: 867 CFTAFTREEILGKGDEWYCNKCKKHVQASKKMEIYKAPQILIIHLKRFRTNKVTMVGNVF 926
Query: 821 LKN---KLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+ N K+ V FP+ + + ++ D + Y YDL+A+ NHYG GGHYTAYA
Sbjct: 927 INNQTQKITQLVKFPLELNLNNLVLSKQAGDNQDYTYDLYAVDNHYGSSAGGHYTAYA 984
>gi|169619313|ref|XP_001803069.1| hypothetical protein SNOG_12851 [Phaeosphaeria nodorum SN15]
gi|160703793|gb|EAT79651.2| hypothetical protein SNOG_12851 [Phaeosphaeria nodorum SN15]
Length = 1581
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 288/639 (45%), Gaps = 97/639 (15%)
Query: 40 LKEGNLYFLISTRWY-RSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERP-GPIDNS-- 95
L+E ++IS +W R W R + +N+ S + + P GP+DN+
Sbjct: 276 LEERQEGYVISEKWLERVWAR-------TSENVG----RPQDFSKEATQGPIGPVDNTCL 324
Query: 96 ---DIIQNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPR--- 145
D +Q+ G+D + ++ GQD+ ++P + WE + WY G P + R
Sbjct: 325 VDTDAMQDDLMDQRGEDFVPLKEGASMGQDFEILPLKAWELVVGWYGVKTGSPTIRRYAY 384
Query: 146 KMISEGIVNEKRVEVFXLCLKLIDSRDNSQTV---------IRLSKKASTRQLYEKVCKL 196
+ + E+ L + R T I SK S E K
Sbjct: 385 NTVPDKSTENLEYELRPPILTIRKVRQAPTTAADTSRVAGKIVASKYESYLTFLEAAKKS 444
Query: 197 RGIE-QEKARIWDYFNKQRSTSPLDV--SDQTLDDAMLQMDQDILLEVQVDNGISMDST- 252
GI+ + K R+W N S P D S DA + ++ + MD+T
Sbjct: 445 AGIDIRNKVRVWRILNIAGSDIPKDAQPSGMLTPDASPRDGSPVVPAPNQSPALIMDATS 504
Query: 253 ------GNDLALVPIEPSRS------SLTIAG-----------------GPALSNG---- 279
G + LV + ++ SLT+AG G +S+
Sbjct: 505 FNNLAYGTERELVTGKDEQANEDFNESLTLAGAGLSQDQVIVLEEHNEKGEYISDAAKVA 564
Query: 280 --HTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQC 337
+ TG + N+ S+ S G + + + G G GL NLGNTC+MNSALQC
Sbjct: 565 AKNKTGSQANKGIQSTTNSGTSTPTGGPLTRSKRRDGRVRGHVGLTNLGNTCYMNSALQC 624
Query: 338 LVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWS-SGRAAVAPRAFKGK 395
L +L+ YFL G + IN NP+G G +A + +L ++ + ++ +P+AFK
Sbjct: 625 LRSVEELSMYFLSGKWKGHINANNPIGHKGAIARNYAAVLSGIYDINASSSFSPKAFKNA 684
Query: 396 LARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP--DEEVANECW 453
L + FSGY Q DSQE +++L+D LHEDLNR+++KPY E DS D E E
Sbjct: 685 LGKANSLFSGYGQQDSQEFVSWLVDALHEDLNRIQKKPYTENPDSDDNTFRDPEAIRELG 744
Query: 454 K----NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVT 509
+ NHKARNDS+ +D+F G YK+T+VCP C KVSITFDP+ LTL LP + +T T
Sbjct: 745 EIYRNNHKARNDSVSMDLFSGFYKNTMVCPDCEKVSITFDPYSQLTLQLP--IEQTWNHT 802
Query: 510 VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPA 569
+ Y G P V + K+ + L + L+ +EVY+H+ +R ++
Sbjct: 803 ITYIPLYGKPYQVEVDMDKNATIRSLKEYVGKRGGGVPASRLMASEVYSHKFYRHLDDKN 862
Query: 570 ELISS---IKDDEHIVAYRFD---------RKQGGKIKL 596
+ S ++DD +I Y D +K+G KL
Sbjct: 863 TIAESNIGVRDDIYI--YELDIAPSNWPAPKKKGSGFKL 899
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R+ I+L C E L D+ WYC +CKE R+A K L++W +PD+L+ HLKRFS
Sbjct: 1265 RKHGITLDECFTETSKSEILSEDNAWYCSRCKELRRAKKTLEIWTVPDILIIHLKRFSGH 1324
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K++ ++FP+ LDLS + +G+ YDLFA+ NH+GGLGGGHYTA A+
Sbjct: 1325 RTFRDKIEELIDFPVEGLDLSGKVGFPEGKDLTYDLFAVDNHFGGLGGGHYTATAQ 1380
>gi|170582208|ref|XP_001896026.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158596854|gb|EDP35126.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 968
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 160/269 (59%), Gaps = 4/269 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
G GL+N+GNTCFMNS LQ LV+ +L YF G Y +IN NPLG G LA F + +
Sbjct: 268 GFTGLRNIGNTCFMNSTLQMLVNCKELQVYFSGGYYKRDINIMNPLGFGGRLAEVFAEFM 327
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+++W+ A P K +A A QF+ + QHD+ E L+F+LDGLHEDLNRV+ KP
Sbjct: 328 KQMWNGMNRAYEPTKIKELVAEKATQFANFAQHDAHEFLSFVLDGLHEDLNRVRVKPTTN 387
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ GRPD EV+ E W NH RNDS+ VD+F GQ KS L CP C+++SITFDPF YL +
Sbjct: 388 TIEAEGRPDIEVSREAWHNHLLRNDSIFVDLFHGQLKSRLQCPKCNQISITFDPFAYLAV 447
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
P P R+ TV + + P+ V G +++ ALS + + + + EV
Sbjct: 448 PFPKE-KRSSTVYFWPLDPCLKPVRIIVRYNADGKISEVLDALSRLVNVN-PKSMRIIEV 505
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYR 585
NH+I R + NP + +++I + I ++
Sbjct: 506 NNHRIVRVY-NPDDSVNNILTTDIIYVFQ 533
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-- 821
SL+ L F E L P++ WYC +CKEH +ATK+L L+ LP +L+ LKRF Y+ L
Sbjct: 794 SLYDMLAMFSETERLKPEESWYCSKCKEHVEATKQLVLYRLPPILIIQLKRFIYTTSLMT 853
Query: 822 ---KNKLDTFVNFPILNLDLSKYMK--SKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
++K D V +P+ NLDL++++ + G+ YDL + H G GHY + ++
Sbjct: 854 VHRRSKDDRPVRYPLDNLDLAQFLSDTAPSGQETKYDLTGVVCHSGSSYFGHYISLGRL 912
>gi|170028244|ref|XP_001842006.1| ubiquitin carboxyl-terminal hydrolase 43 [Culex quinquefasciatus]
gi|167871831|gb|EDS35214.1| ubiquitin carboxyl-terminal hydrolase 43 [Culex quinquefasciatus]
Length = 1083
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 172/617 (27%), Positives = 277/617 (44%), Gaps = 92/617 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCFMN+ LQCL HT LA+YF+ D Y ++ N + G GEL
Sbjct: 152 GVIGLRNHGNTCFMNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINAKKFGTKGELTEQ 211
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+L+ LW+ A +FK + R+ QF QHD+QE L +LLD +HEDLN +
Sbjct: 212 LALVLKSLWTCKDAPEYSSSFKAVVDRYGSQFRSSTQHDAQEFLFWLLDKVHEDLNTASK 271
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+ Y +K++ GR DE +A E NH N+S + VFQ Q++S+L CP C K S TFDPF
Sbjct: 272 RKYKTIKNNYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCHKQSNTFDPF 331
Query: 492 MYLTLPLPSTVTRTMTVTVFYAN--------GSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+++ LP + + V V YA+ G G+P V ++ D +A
Sbjct: 332 HCISVQLPQLTLQPVLVRVIYASQQPKQVQLGLGVPHGSLVEGLREQLHADTGIA----- 386
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQ 603
E ++LAE+ R + + + L++S+ D + V Y + G+ +IV
Sbjct: 387 ----GERMILAEICESGFNRVYCD-SHLVASVGDGDGTV-YCIESPVVGEGMTQIV--LC 438
Query: 604 EKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKEN 663
+A + E + FG P + + +S ++ + K +S + ++ A + +E
Sbjct: 439 ISNARRDVGSGEVRRFGTPFCLVVSRD-VSYVELQKLLLKEMSGILKSEVFAFSTPVQE- 496
Query: 664 GFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHI 723
+ + S + +ET+ L + + LS+ H+
Sbjct: 497 -MFRMRLQDPSCDADAFLETSVEHPLFTEMIDLALSVLPTDAGPA-------------HV 542
Query: 724 KVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT--RQEAISLFSCLDAFLTEEPLGPD 781
K+L++W + D + D V H++ +K +++L CL+ + E L +
Sbjct: 543 KLLIEWVNPERFFSD---MTDPFVEHESVSQMKDKIPASSSLTLEQCLEHYTKAETLSAE 599
Query: 782 DMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN---KLDTFVNFPILNLDL 838
D W CP C+++ K L LW LPD++V H KRF + KL T V FP+ D+
Sbjct: 600 DAWRCPHCQKYLPVVKTLGLWSLPDIMVIHFKRFRQQQLRGTQAAKLTTLVKFPLHGFDM 659
Query: 839 SKYMKSK-DGESYV---------------------------------------YDLFAIS 858
+ ++ + + E+ YDL+A+
Sbjct: 660 TPHLARELNAEASTGGTNGTTEDNWSPWRKTTKRNPVHQHSNNQFPHHMMDNRYDLYAVC 719
Query: 859 NHYG-GLGGGHYTAYAK 874
H G L GHYTA K
Sbjct: 720 YHQGDTLETGHYTAACK 736
>gi|348685710|gb|EGZ25525.1| hypothetical protein PHYSODRAFT_484843 [Phytophthora sojae]
Length = 1784
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 145/233 (62%), Gaps = 2/233 (0%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELAL 370
++ GG GL NLGNTC+MNSALQCL +T LA+YFL G Y ++IN + LG+ G+LA
Sbjct: 968 RRMRSGGSVGLANLGNTCYMNSALQCLTNTKLLAEYFLSGMYLEDINRTSTLGLQGKLAE 1027
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+G L +W + +++PR FK + +F F G +Q D+QELLAFLL GL EDLNR++
Sbjct: 1028 VYGKLAEDMWCVKQKSISPRNFKKSIGKFNEVFRGNDQQDAQELLAFLLSGLSEDLNRIQ 1087
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
KPYIE DS GR D ++A+E W+NH R S+IV +F GQYKS L C +C S F+P
Sbjct: 1088 DKPYIEQPDSDGRYDADLADEWWRNHLRREVSIIVALFTGQYKSLLTCSICGFKSARFEP 1147
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
F +L +PLP T+TV + A+G PM +V L DL L C
Sbjct: 1148 FTFLQVPLPEPKHNTVTVQLVLASGV-TPMKVSVRLSISATIFDLKHELMKMC 1199
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 8/87 (9%)
Query: 758 TRQEAIS-----LFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
R EAI L CLDAF +EE + YC C++H++ TKKL++W LP V+V HL
Sbjct: 1522 ARNEAIDKGPVPLRHCLDAFTSEEKISEG---YCSSCRQHQEMTKKLEIWRLPPVMVVHL 1578
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLS 839
KRF Y++ + KL + V FPI +LDLS
Sbjct: 1579 KRFQYTQTYRRKLGSLVEFPIHDLDLS 1605
>gi|426196599|gb|EKV46527.1| hypothetical protein AGABI2DRAFT_178845 [Agaricus bisporus var.
bisporus H97]
Length = 1277
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 130/178 (73%), Gaps = 6/178 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL N+GNTCFMNSALQCLVHT +L+ YFL G + DE+N +NPLGM G +A AFG LL
Sbjct: 405 GTLGLSNMGNTCFMNSALQCLVHTKELSDYFLSGVFEDELNADNPLGMGGAIAEAFGSLL 464
Query: 377 RKLW--SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
++W S + +PR FK L +FAPQFSGY QHDSQEL+AFLLDGLHEDLNR+ +KPY
Sbjct: 465 HRIWADSGPSTSYSPREFKQVLQKFAPQFSGYQQHDSQELVAFLLDGLHEDLNRILKKPY 524
Query: 435 IEMKDSGGRPDEE---VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
+E D G + E +A + W + RNDS+IVD+FQGQY+STLVCP C K+ I +
Sbjct: 525 VEKPDWEGGGNLELVQLAKKSWDGYLLRNDSVIVDLFQGQYQSTLVCPECGKIPIEIN 582
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 86/139 (61%), Gaps = 20/139 (14%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
K+ + + +SL CLD F EE LG DD+WYCPQCK+H+QATK+ DLW PDVLV HLK
Sbjct: 885 AAKEKKNKGLSLQDCLDEFTKEEELGEDDLWYCPQCKKHQQATKRFDLWKAPDVLVVHLK 944
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD--------------------GESYVYD 853
RFS SR L++K+D F++FPI +L+L ++ + E +YD
Sbjct: 945 RFSNSRTLRDKIDAFIDFPIQDLNLEDMVRERRVAKALQAEGVNIEELNLTNLDEPLIYD 1004
Query: 854 LFAISNHYGGLGGGHYTAY 872
LF + H GGLGGGHY AY
Sbjct: 1005 LFGVDEHMGGLGGGHYRAY 1023
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 35/162 (21%)
Query: 6 SSVLMMENGGSCLPCTPD----EERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
SS L + G L TP+ E+ +V+D K + ++ G +FL++ W++ W +
Sbjct: 86 SSTLTLPAGH--LASTPNMTLAEKLALVEDGKKKQ---MEIGENWFLVAHSWWKRWRKAC 140
Query: 62 CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ-NGNGSSEGDDLEVRRNLEEGQ 120
G+E ++ + GP+DN+ ++ +GN +++ L +G
Sbjct: 141 TGEEDKEGAVT-------------EQDLGPVDNAPLLDPDGN---------LKQGLIDGL 178
Query: 121 DYVLVPQQVWEKLFCWYKGGP--ALPRKMISEGIVNEKRVEV 160
D VP VW L WY G P +LPR+++ G E +E+
Sbjct: 179 DVEFVPHDVWRCLAIWY-GEPLHSLPRRVVPRGAAKEPTLEL 219
>gi|145542422|ref|XP_001456898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424712|emb|CAK89501.1| unnamed protein product [Paramecium tetraurelia]
Length = 1029
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
K GL G +NLGNTC+MNSALQCL +T +L++YFL + + +INT+N LG GE A F
Sbjct: 337 KLGLTGFRNLGNTCYMNSALQCLSNTTELSRYFLDNSFKFDINTQNALGTKGEFASLFSY 396
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL++LW + ++P FK + + +P F+G QHD+QE + F LD L+EDLNRVK KPY
Sbjct: 397 LLKRLWFDKQTTISPFQFKRLVGKLSPNFAGNAQHDAQEFITFTLDLLNEDLNRVKVKPY 456
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+ D+ RPD+EV+ E W+ K RNDSLIVD GQY+S L CP C+K+SITFDP++ +
Sbjct: 457 VEIPDNNNRPDDEVSQEQWECFKKRNDSLIVDQLYGQYRSKLQCPNCNKISITFDPYLMV 516
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
+ +P + + + L P T
Sbjct: 517 NVTIPQEKKKVLEFYIIDPENFWLSQPVT 545
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 698 LSLTDERISSCKPIQKDSILKPGKHI---KVLLDWTDDVH----ELYDPSYIKDLPVVHK 750
L TD+ C ++D +L+P I K + DD++ +++DP+Y PVV+
Sbjct: 726 LEFTDKIFGDCFQ-REDKLLQPEIQIIWLKPCREKIDDMYTEYQKIFDPNY--KAPVVNI 782
Query: 751 TGFTVKKTRQ--EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
+K+ + + +L CL+ E L D+ WYC CK+H QA K L ++ +L
Sbjct: 783 NWDNNQKSNKYKQTYTLEHCLEYSTKPEQLQVDNSWYCSGCKDHVQAYKTLQIYKTSKIL 842
Query: 809 VFHLKRFSYS-RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGG 867
+FHLKRF S + K+KL T + +P LD++ ++ +D + +Y+L+AI NH G G G
Sbjct: 843 IFHLKRFKDSYKLFKSKLQTNIIYP-EKLDMTNFVLHQDNNN-LYELYAICNHIGESGSG 900
Query: 868 HYTAYAKVNA 877
HYTA+ K N
Sbjct: 901 HYTAFCKNNG 910
>gi|156095512|ref|XP_001613791.1| ubiquitin carboxyl-terminal hydrolase 2 [Plasmodium vivax Sal-1]
gi|148802665|gb|EDL44064.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
vivax]
Length = 1346
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 152/259 (58%), Gaps = 14/259 (5%)
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKK----GEKGGLAGLQNLGNTCFMN 332
+ GHT G G + G T GY + AK+ E GG GL NLGNTCF+N
Sbjct: 290 AQGHTQGNAHGNAQGHTQGHT-----QGYPQQSVAKQISYIFEHGGDRGLVNLGNTCFLN 344
Query: 333 SALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAA--VAP 389
S+LQCL + + YFL G + + IN NP+G HG LA A+ + L +LW + + AP
Sbjct: 345 SSLQCLAKIRNFSNYFLSGTFWNHINYSNPVGQHGRLAKAYYETLLELWKIDKRSEPYAP 404
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG--RPDEE 447
+ K ++ +F GY QHDSQELLAFLLDGLHEDLN +++KPY E K GG + D +
Sbjct: 405 KVLKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEKLQGGLDKQDID 464
Query: 448 VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMT 507
VA W HK N+S+IVD+FQGQY+S L CP C KVSI FDPFMYL++PLP +
Sbjct: 465 VAEASWNRHKEINNSIIVDLFQGQYRSRLQCPKCKKVSIAFDPFMYLSIPLPPKKNHRIW 524
Query: 508 VTVFYANGSGLPMPFTVTL 526
V + M F+ +
Sbjct: 525 FHVILNRDFPIGMRFSCSF 543
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
+E + +CL F EE L ++ WYC CK H QA KKLDL+ +P +L+ HLKRF+ +
Sbjct: 1154 EERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHVQAYKKLDLFRMPIILILHLKRFNNTN 1213
Query: 819 RYLKNKLDTFVNFP------------ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
R+L+ K+D++V +P IL L M+ S +Y+L ++ H GGL G
Sbjct: 1214 RWLRTKIDSYVYYPHKENEYLNMTPYILEDGLKHMMQMDPHYSPLYELIGVNCHTGGLCG 1273
Query: 867 GHYTAYAKVNA 877
GHY AY K+N
Sbjct: 1274 GHYFAYVKLNG 1284
>gi|124506253|ref|XP_001351724.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
falciparum 3D7]
gi|23504653|emb|CAD51531.1| ubiquitin carboxyl-terminal hydrolase 2, putative [Plasmodium
falciparum 3D7]
Length = 1332
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 138/217 (63%), Gaps = 5/217 (2%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFG 373
+KGG GL NLGNTCF+NS+LQCL + YFL G + + IN NP+G HG LA A+
Sbjct: 307 DKGGDRGLINLGNTCFLNSSLQCLSKILKFSNYFLNGSFWNHINYSNPVGQHGRLAKAYY 366
Query: 374 DLLRKLWSSGR--AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ L ++W + AP+ K ++ +F GY QHDSQELLAFLLDGLHEDLN +++
Sbjct: 367 ETLTEMWKINKRDCPYAPKVLKEAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIRK 426
Query: 432 KPYIEMKDSGG--RPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
KPY E K GG + D +VA W HK N+S+IVD+FQGQY+S L CP C KVSITFD
Sbjct: 427 KPYYEEKLQGGVDKLDVDVAEASWNRHKEINNSIIVDLFQGQYRSRLQCPKCKKVSITFD 486
Query: 490 PFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL 526
PFMYL++PLP + V + + + F+ T
Sbjct: 487 PFMYLSIPLPPKKNHRVWFHVILSRDIPIAIRFSCTF 523
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
+E + +CL F EE L ++ WYC CK H QA KKLDL+ +P +L+ HLKRF+ +
Sbjct: 1140 EEKYGIDTCLKLFSEEEHLDENNTWYCSNCKLHVQAYKKLDLFRMPIILILHLKRFNNTN 1199
Query: 819 RYLKNKLDTFVNFP------------ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
R+L+ K+D++V +P IL L K + +Y+L ++ H G L G
Sbjct: 1200 RWLRTKIDSYVYYPHKDKEYLNMAPYILQDGLKHMTKLNPKYAPLYELIGVNCHTGSLCG 1259
Query: 867 GHYTAYAKVN 876
GHY AY K+N
Sbjct: 1260 GHYFAYVKLN 1269
>gi|42406407|gb|AAH65909.1| USP19 protein, partial [Homo sapiens]
Length = 784
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 151/255 (59%), Gaps = 7/255 (2%)
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
N NPLG G LA+ F LLR LW A P K +A A QF+GY QHD+QE +A
Sbjct: 1 NYNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMA 60
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLNR++ KPY E DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS L
Sbjct: 61 FLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKL 120
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCPVC+KVSITFDPF+YL +PLP + + V F P+ F V++ K +
Sbjct: 121 VCPVCAKVSITFDPFLYLPVPLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEV 179
Query: 537 L-ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK-- 593
L +LS + +K E L LAEV ++ R F P+ + ++ + ++ + + K
Sbjct: 180 LDSLSQSVHVK-PENLRLAEVIKNRFHRVFL-PSHSLDTVSPSDTLLCFELLSSELAKER 237
Query: 594 -IKLEIVNRWQEKSA 607
+ LE+ R Q S
Sbjct: 238 VVVLEVQQRPQVPSV 252
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 743 KDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLW 802
K+L G + R +L CL+ F E L P++ WYCPQCK+HR+A+K+L LW
Sbjct: 504 KELECAEDPGSAGEAARAGHFTLDQCLNLFTRPEVLAPEEAWYCPQCKQHREASKQLLLW 563
Query: 803 MLPDVLVFHLKRFSYSRYL-KNKLDTFVNFPILNLDLSKY-MKSKDGESYVYDLFAISNH 860
LP+VL+ LKRFS+ ++ ++K++ V FP+ NLDLSK+ + K+ + YDL+A+ NH
Sbjct: 564 RLPNVLIVQLKRFSFRSFIWRDKINDLVEFPVRNLDLSKFCIGQKEEQLPSYDLYAVINH 623
Query: 861 YGGLGGGHYTAYAKV 875
YGG+ GGHYTA A++
Sbjct: 624 YGGMIGGHYTACARL 638
>gi|449303056|gb|EMC99064.1| hypothetical protein BAUCODRAFT_120356 [Baudoinia compniacensis
UAMH 10762]
Length = 1613
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 166/285 (58%), Gaps = 11/285 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G G GL NLGNTC+MNSALQC+ +LA YFL D Y EIN+ NPLG G +A
Sbjct: 507 RDGRTRGTVGLSNLGNTCYMNSALQCIRSVEELAIYFLADRYKAEINSNNPLGHGGVMAK 566
Query: 371 AFGDLLRKLWSSGRAAV-APRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
+ +L ++ ++ +P FK L P FSGY Q DSQE L+FL+D LHEDLNR+
Sbjct: 567 KYAGVLNGIYGDNSSSTFSPSDFKRTLGSLQPLFSGYGQQDSQEFLSFLVDALHEDLNRI 626
Query: 430 KQKPYIEMKDSGGR----PDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
++KPY E DS + P E+ KNH+ARNDS+ +D+F G YK+T+ CPVC K
Sbjct: 627 QKKPYTENPDSDDKTVRDPQAIIELGEVYRKNHRARNDSVCMDLFSGFYKNTMECPVCEK 686
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDP+ +T+ LP + TVT NG P+ + ++ K L ++++
Sbjct: 687 VSITFDPYSLVTVQLPIESSFQHTVTFVPLNGP--PVNHAIDTDRNSTIKALKQSIASKH 744
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELIS-SIKDDEHIVAYRFD 587
+ L +AEVY +I++ FEN L SI+ ++I A+ +
Sbjct: 745 SGVSADRLWMAEVYGQRIYKVFENHQTLAELSIQGHDYIFAFELE 789
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 746 PVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLP 805
PV+ + R+ ++L C E L D+ WYC +CKE RQA K L++W +P
Sbjct: 1188 PVLQAKKQQRAERRKHGVTLEDCFVETGKREILSEDNAWYCNRCKEMRQAAKTLEIWTIP 1247
Query: 806 DVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGL 864
D+L+ HLKRF +R ++K+D V++PI LD+++ + K DG+ Y+YDLFA+ NHYGGL
Sbjct: 1248 DILIVHLKRFGGNRSFRDKIDVMVDYPIDGLDMTEKIGLKEDGKEYIYDLFAVDNHYGGL 1307
Query: 865 GGGHYTAYAK 874
GGGHYTA AK
Sbjct: 1308 GGGHYTALAK 1317
>gi|452843512|gb|EME45447.1| hypothetical protein DOTSEDRAFT_52723 [Dothistroma septosporum
NZE10]
Length = 1548
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 157/265 (59%), Gaps = 13/265 (4%)
Query: 310 TAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGEL 368
T K G G+ GL NLGNTC+MNSALQC+ +LA YFL +Y EIN +NPLG HG +
Sbjct: 500 TRKDGRTRGVVGLTNLGNTCYMNSALQCIRSVEELAVYFLSKEYKKEINNDNPLGHHGAM 559
Query: 369 ALAFGDLLRKLWSSGR-AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
A A+ +L ++ +A PR FK KL P FSGY Q DSQE L+FL+D LHEDLN
Sbjct: 560 ANAYFTVLAGVYGDNSGSAYTPREFKSKLGSIQPLFSGYGQQDSQEFLSFLVDALHEDLN 619
Query: 428 RVKQKPYIEMKDSGGRP--DEEVANECWK----NHKARNDSLIVDVFQGQYKSTLVCPVC 481
R+ +KPYIE DS D E +E + NH+ RNDS+ D+F G YK+T+ CP C
Sbjct: 620 RIIKKPYIENPDSDDAKVHDPEYIHELGETYRANHQKRNDSVATDLFGGFYKNTMECPNC 679
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
KVS+TFDP+ LT+ LP T+T +G P+ + + K+ K IL S
Sbjct: 680 EKVSVTFDPYSLLTVQLPMDHAFQHTITFIPLHGK--PINHEIDIDKNSTIK--ILKESI 735
Query: 542 ACCLKIDEG-LLLAEVYNHQIFRFF 565
A D L +AEVY+H+I++ F
Sbjct: 736 AKKHNTDASRLWMAEVYSHKIYKVF 760
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++ I L C E L D+ WYC +CKE R+A K L +W LPD+LV H+KRF +
Sbjct: 1200 KKHGIDLEDCFVETGKREILSEDNAWYCNRCKEMRRAAKTLQIWTLPDILVVHMKRFGGT 1259
Query: 819 RYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K+D V++P+ LD++ K +DG+ YVYDLFA+ NHYGGLGGGHYTA AK
Sbjct: 1260 RSFRDKIDVLVDYPVEGLDMNDKVGLKEDGKDYVYDLFAVDNHYGGLGGGHYTAMAK 1316
>gi|396479609|ref|XP_003840796.1| hypothetical protein LEMA_P104480.1 [Leptosphaeria maculans JN3]
gi|312217369|emb|CBX97317.1| hypothetical protein LEMA_P104480.1 [Leptosphaeria maculans JN3]
Length = 2352
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 211/390 (54%), Gaps = 41/390 (10%)
Query: 225 TLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGY 284
TL+DA + DQ I+LE + G + T N +A + S++S I T G
Sbjct: 1252 TLEDAGITQDQIIVLEEHDERGEYISDT-NTMATI----SKTSSQI----------TKGL 1296
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
N G + ++ G + + G+ G GL NLGNTC+MNSALQCL +L
Sbjct: 1297 PSNPNSGRNTPTS------GALTRGRTRSGKVRGHVGLTNLGNTCYMNSALQCLRSVEEL 1350
Query: 345 AQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGR-AAVAPRAFKGKLARFAPQ 402
+ YFL + + +EIN +NP+G G +A + +LL +++ +G ++ AP+ FK L R
Sbjct: 1351 SMYFLNNKWKEEINVDNPIGHKGAIAKVYANLLSQIYDTGNTSSFAPKNFKQTLGRANGL 1410
Query: 403 FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR----PD--EEVANECWKNH 456
FSGY Q DSQE +++L+D LHEDLNRV+ KPY E DS P+ ++ +NH
Sbjct: 1411 FSGYGQQDSQEFVSWLVDALHEDLNRVRVKPYRENPDSDDNTFKDPNAVRQLGETYRENH 1470
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
+ARNDS+ +D+F G YK+T+VCP C KVSITFDP+ LTL LP + +T T T+ Y
Sbjct: 1471 RARNDSVAMDLFSGFYKNTMVCPECDKVSITFDPYSQLTLQLP--IEQTWTHTITYVPLL 1528
Query: 517 GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI-SSI 575
G P V + K+ K L + + ++ +EVY+H+ +R ++ + + ++I
Sbjct: 1529 GRPYQLEVDIDKNATIKTLKEYVGKRGGGVPAKRIMASEVYSHKFYRHLDDASTIAETNI 1588
Query: 576 KDDEHIVAYRFD---------RKQGGKIKL 596
+ I Y D +K+G K K+
Sbjct: 1589 GARDDIYFYELDHAPSNWPAPKKKGSKYKV 1618
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R+ I+L C E L D+ WYC +CKE R+ATK L++W +PD+L+ HLKRFS
Sbjct: 1982 RKHGITLEECFTETSKSEVLSEDNAWYCSRCKELRRATKTLEIWTVPDILIIHLKRFSGH 2041
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K++ ++FP+ LDL+ + + + YDLFA+ NHYGGLGGGHYTA A+
Sbjct: 2042 RSFRDKIEELIDFPVEGLDLTGKVGFPESKDLTYDLFAVDNHYGGLGGGHYTATAQ 2097
>gi|452000642|gb|EMD93103.1| hypothetical protein COCHEDRAFT_1223774 [Cochliobolus heterostrophus
C5]
Length = 2168
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 195/664 (29%), Positives = 305/664 (45%), Gaps = 109/664 (16%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWY-RSWERYVCGDEPSIDNISFDSP 76
LP ++ +++ + ++ +D +EG ++IS RW R W R + +N+S
Sbjct: 807 LPSIDEQVTRVMGMMNSEPLVDRQEG---YIISERWLERVWAR-------TSENVS---- 852
Query: 77 HMNGVSSKRAERP-GPIDNS-----DIIQNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQV 129
S + + P GP+DNS +++Q G+D + + + GQD+ ++P++
Sbjct: 853 RPQDFSKEATQGPVGPVDNSHLVDTELLQEDLADQRGEDFIPLSKAATLGQDFEVLPRKA 912
Query: 130 WEKLFCWY---KGGPALPR-------KMISEGIVNEKRVEVFXL--CLKLIDSRDNSQTV 177
WE + WY KG P + R SE I E V + K + DNS+
Sbjct: 913 WELVLSWYGLNKGSPVIRRYAHNTVPGQASEDISYELHPPVITIRKVRKSANPADNSKLA 972
Query: 178 IRL--SKKASTRQLYEKVCKLRGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMD 234
++ S+ S E K GI+ K RIW ST+P D + A+L D
Sbjct: 973 EKIVASRYESFVTFLEAAKKAVGIDLNNKVRIWRIL----STAPTDKPQPSQPSAILTPD 1028
Query: 235 Q----------------DILLEVQVDNGISMDS-----TGNDLALVPIEPSRSSLTIAGG 273
++++V N ++ S TG D I SLT+A
Sbjct: 1029 ASPRNGSPVAPTGVQRPSLVMDVASFNMLAYGSERELVTGKDEKANEI--YNESLTLADA 1086
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMD---------DGYDSYNTAKKG---------- 314
L+ T + G T + G S T+ +
Sbjct: 1087 -GLTQDQTIVLEEHDEKGEYISDTIKEASKNKAGAAAGKGLQSTTTSGRNTPTGGPLTRG 1145
Query: 315 --EKGGLAGLQNLGN---TCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGEL 368
+ G + G L N TC+MNSALQCL +L+ YFL + + +E+N +NP+G G +
Sbjct: 1146 RKQNGKVRGHVGLTNLGNTCYMNSALQCLRSVEELSMYFLSNKWKEEVNADNPIGHKGVI 1205
Query: 369 ALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
A ++ LL ++S ++++P+ FK KL R FSGY Q DSQE +++L+D LHEDLN
Sbjct: 1206 AKSYASLLSAIYSLDNNSSISPKDFKQKLGRANSLFSGYGQQDSQEFVSWLVDALHEDLN 1265
Query: 428 RVKQKPYIEMKDSGG---RPDEEVAN--ECWK-NHKARNDSLIVDVFQGQYKSTLVCPVC 481
R+ +KPY E DS R E V E ++ NH+ARN+S+ +D+F G YK+T+VCP C
Sbjct: 1266 RIHKKPYRENPDSEDDTYRDPEAVKKLGEIYRDNHRARNNSVAMDLFSGFYKNTMVCPDC 1325
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALST 541
KVSITFDP+ LTL LP + +T T T+ Y G P V + K+ K L +
Sbjct: 1326 EKVSITFDPYSQLTLQLP--IEQTWTHTITYVPLYGKPYQLEVDIDKNATIKTLKEFVGK 1383
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYRFD---------RKQG 591
++ +E+Y+H+ +R E+ + S+I + I Y D +K+G
Sbjct: 1384 RGGGVPANRIMASELYSHKFYRHLEDSLTVSESNIGARDDIYFYELDMAPSNWPAPKKKG 1443
Query: 592 GKIK 595
K K
Sbjct: 1444 SKYK 1447
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 725 VLLDWTDD-VHELY------DP---SYIK-----DLPVVHKTGFTVKKTRQEAISLFSCL 769
++LDWT + + L+ DP IK D P + R+ I+L C
Sbjct: 1764 IVLDWTSEAIDALFGGTSDDDPRGADVIKSIEVFDDPEIRDKKAKRAARRKNGINLDECF 1823
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
E L D+ WYC +CKE R+ATK L++W +PD+L+ HLKRFS R ++K++ V
Sbjct: 1824 TESSKSEVLSEDNAWYCSRCKELRRATKTLEIWTVPDILIIHLKRFSGHRTFRDKIEDLV 1883
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LDLS + +G+ YDLFA+ NHYGGLGGGHYTA A+
Sbjct: 1884 DFPVEGLDLSGKVGYPEGKDLTYDLFAVDNHYGGLGGGHYTATAQ 1928
>gi|320588013|gb|EFX00488.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 1698
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 163/284 (57%), Gaps = 10/284 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD-EINTENPLGMHGELAL 370
K G G GL NLGNTC+MNSALQC+ +L +YFL SD EIN NPLG G +A
Sbjct: 563 KSGRVMGCVGLSNLGNTCYMNSALQCVRSVEELTKYFLVHESDVEINQVNPLGHGGNVAK 622
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ LL +++ + ++++PR FK + R+AP FSGY Q DSQE L FLLDGL EDL+RV
Sbjct: 623 AYSYLLDEIYKDNAPSSISPRGFKSTIGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLSRV 682
Query: 430 KQKPYIEMKDSG----GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYI DS G P E+A + W K R+DS+I D+F G YKSTL+CPVC K
Sbjct: 683 KKKPYIAKPDSTDEMIGNPAAIREMAEQVWDITKKRDDSVIADLFTGMYKSTLICPVCQK 742
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VSITFDPF LTLPLP + T V + + P+ V L K + L +
Sbjct: 743 VSITFDPFTNLTLPLP--IQNVWTKRVRFVPLNDRPVNLDVELDKTSGFRALKEFVGARV 800
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD 587
+ + + AE + F++ A + I + + IV + +
Sbjct: 801 GVPAERLVGGAEELRGNFIKVFDDFACVSEEISNGDTIVLHEVE 844
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R+ ++L CLD F EE L +D WYCP+CKEHR+A+KK DLW PDVLV HLKRFS S
Sbjct: 1290 RKHGLTLDECLDEFEREEILSENDTWYCPRCKEHRRASKKFDLWKTPDVLVVHLKRFSSS 1349
Query: 819 RYLKNKLDTFVNFPILNLDLSK-YMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ ++KLDT V+FP++ LDL+K + + G+ YDL + +H+GGLGGGHYTA+A+
Sbjct: 1350 GWRRDKLDTRVDFPVVGLDLTKRVLDRQTGKQETYDLIGVDDHWGGLGGGHYTAFAR 1406
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 5 DSSVLMMENGGSCL-PCTPDEE--RQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
D ++L + L P P EE R I +K+ +L+EG +L+S RW +
Sbjct: 167 DMAILPADQPAEALKPAPPIEEQIRTIEGLVKDFGSSELQEGTTAYLVSRRWLAQAQALG 226
Query: 62 CGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEG-Q 120
GD + R GP+DN+DII+ EG+D VR G +
Sbjct: 227 SGDA------------AKAAKAVPLGRLGPVDNADIIEGVVQDVEGNDA-VRLKPGTGLE 273
Query: 121 DYVLVPQQVWEKLFCWY 137
D+ L Q W+ L WY
Sbjct: 274 DFELFSQSAWDLLVSWY 290
>gi|323449693|gb|EGB05579.1| hypothetical protein AURANDRAFT_38431 [Aureococcus anophagefferens]
Length = 812
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 162/278 (58%), Gaps = 17/278 (6%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNSALQCL HTP L Y L + ++ EIN NPLG G + F ++L
Sbjct: 84 GATGLVNLGNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANVL 143
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LWS +VAP FK LAR PQF+G +Q DSQE L +LD LHED+NRV +KPY+E
Sbjct: 144 RMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHEDVNRVVEKPYVE 203
Query: 437 MKDSGGRPD---EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
D E A + W + RN S+IVD+FQGQ KS C C K S+ F+PFM+
Sbjct: 204 EPDDDDVAKLTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFMH 263
Query: 494 LTLPLPSTVTRTMTVTVFYANGSGLP-------MPFTVTLMKHGCCKDLILALSTACCLK 546
L++PLPST + + +A P F V++ + G DL ALS +
Sbjct: 264 LSVPLPSTQEKRLK----HAASKKRPGEKQLRAAIFGVSVPRLGEVGDLKSALSEVTGVP 319
Query: 547 IDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
+ + + +VY H+ R E+ E +++++DD+ +VAY
Sbjct: 320 RAD-IAVGDVYRHRFARILEDD-EPLAAVRDDDVVVAY 355
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
I L CLDAF EE L D W CPQCKE R AT K++ W LPD+LV H+KRF S +
Sbjct: 643 IPLSHCLDAFSKEETLSEADAWICPQCKEPRSATSKIEPWKLPDILVIHVKRFLCSAKWR 702
Query: 823 NKLDTFVNFPILNLDLSKYM----KSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
K+ T V FP+ LD++ ++ +S + YDLFA++NH GG+ GGHYT+Y + +
Sbjct: 703 EKIRTKVLFPLSALDMAPWVHEEARSLQRGAMTYDLFAVTNHLGGMTGGHYTSYVRAD 760
>gi|207344172|gb|EDZ71401.1| YJL197Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 483
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 154/273 (56%), Gaps = 19/273 (6%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN K G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 215 NYFAYN--KLEPASGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 272
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 273 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 332
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 333 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 392
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 393 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 450
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIF 562
DL + L + L E++++QI+
Sbjct: 451 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIY 482
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 133/192 (69%), Gaps = 11/192 (5%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G+ GL+NLGNTCF+NS+LQCL T L YFLG DY EIN N LG G+LA A+ +L+
Sbjct: 1 GVVGLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELM 60
Query: 377 RKLW-----SSGRAAVAPRA-----FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
++LW SG ++ R FK L FAPQF G +QHD+QELL+FLLDG+HEDL
Sbjct: 61 KELWLQAAPVSGYTKISARVVKPTRFKSSLESFAPQFLGTSQHDAQELLSFLLDGIHEDL 120
Query: 427 NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
NR+ +KPYIE +D G DE A E WKN+ R+ SL+VD+FQGQ ++TL C C V++
Sbjct: 121 NRIPKKPYIEDRDCDGTHDERDAIEAWKNYLRRDKSLVVDIFQGQLRNTLTCLTCRHVNV 180
Query: 487 TFDPFMYLTLPL 498
F+PFMYL+LPL
Sbjct: 181 RFEPFMYLSLPL 192
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 3/113 (2%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY--L 821
+L CL +L EE L ++ WYC C+ HR ATKK DLW++P +L+ HLKRF ++ Y L
Sbjct: 198 TLDDCLRLYLAEERLVRENQWYCSVCQTHRDATKKTDLWIVPAILIVHLKRFKFNEYGQL 257
Query: 822 KNKLDTFVNFPILN-LDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K + + +P+ + DLS + S+ E +YDL+A+SNH G LGGGHYTAY+
Sbjct: 258 GSKNNACIRYPVGDSWDLSGVVCSRGSEEPLYDLYAVSNHVGDLGGGHYTAYS 310
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 131/189 (69%), Gaps = 2/189 (1%)
Query: 314 GEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALA 371
G +G L GL+NLGNTCFMNS +Q L ++ LA YF+ G Y IN EN LG G++A
Sbjct: 802 GNQGRALTGLKNLGNTCFMNSIIQSLANSTPLATYFIEGSYKYHINRENKLGRGGKVAEE 861
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
F ++ +WS +++PR FK +++F PQF+GY Q DSQE L FLLDGLHEDLNRVK
Sbjct: 862 FAVVINAIWSGHYRSISPRDFKLTVSKFVPQFAGYEQQDSQEFLLFLLDGLHEDLNRVKH 921
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+ YIE KD+ D++ A W NHK N+S++V++FQGQ+KSTL C C K S+T+D F
Sbjct: 922 RKYIEEKDNTHLTDDQAAQLAWNNHKRLNESIMVELFQGQFKSTLQCLFCQKKSVTYDAF 981
Query: 492 MYLTLPLPS 500
MYL+LPL S
Sbjct: 982 MYLSLPLLS 990
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL+ C+ F E +G D W+CP+CK HR+A K++++W LP +L+ HLKRFSY ++
Sbjct: 995 SLYDCVKNFTKLEKVGGADKWFCPKCKVHREANKRIEIWKLPHILLIHLKRFSYEGVWRH 1054
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FPI NLD+S ++ S Y+L+A+SNHYG + GGHYTA+ K
Sbjct: 1055 KLQTDVDFPINNLDMSSHVIGPKKRS-SYNLYAVSNHYGTMDGGHYTAFCK 1104
>gi|149247252|ref|XP_001528040.1| hypothetical protein LELG_00560 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447994|gb|EDK42382.1| hypothetical protein LELG_00560 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1442
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 187/339 (55%), Gaps = 30/339 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G G NLGNTC+MNSALQCL+H P++ +YF G Y E+N +NPLG HG +A +FG LL
Sbjct: 400 GRMGFSNLGNTCYMNSALQCLLHVPEVNKYFHYGVYRKELNVDNPLGYHGNIANSFGTLL 459
Query: 377 RKLWSSGR--AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
+ + + +++ PR FK + R++ FSGY Q DSQE L++LLD LHEDLNR+K KPY
Sbjct: 460 KSAFDPLKHTSSILPRDFKLTIGRYSSVFSGYLQQDSQEFLSWLLDALHEDLNRIKAKPY 519
Query: 435 IEMKDSGGRPDEEV---------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
E + D+E+ A+ CWK H RNDS+I D+F G Y+STLVCP C+K S
Sbjct: 520 CEKPELN---DDEISDWNAIVRLADTCWKQHLQRNDSVITDLFTGLYQSTLVCPDCNKTS 576
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVTVF-YANGSGLP---MPFTVTLMKHGCCKDLILALST 541
ITFDPF LTLPLP + T T+ ++ LP M V L K L+ L+
Sbjct: 577 ITFDPFNDLTLPLPISKKWYHTFTIVDLSSLRLLPTRVMRLEVELQKTSNYDALVAYLAK 636
Query: 542 ACCLKIDEGLLLAEVYNHQIFRFFE---NPAELI---SSIKDDEHIVAYRFDRKQGGKIK 595
+ + L + E++ + I+ F+ N + + I+D + I+ Y I
Sbjct: 637 YLKVPL-SFLFIYELFQNSIYADFQADYNKNKFMPIGDIIRDADDILVYIIPHDVENDII 695
Query: 596 LEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
L + N +++ + FG PL L++ +L+
Sbjct: 696 LPVYNAVEDEDKLYQMV----HYFGLPLFVTLDKSNLAS 730
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
++ R+ ISL CL F T E LG D+WYCP+CK H++ATK + LW D+L HLKRF
Sbjct: 1112 ERQRKSRISLAECLKYFSTPELLGEHDLWYCPRCKAHKRATKTIQLWSAGDILTIHLKRF 1171
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSK--DGESYVYDLFAISNHYGGLGGGHYTAYA 873
+R +K+D ++FPIL LD+S ++ + E VYDL A+ NHYGGLGGGHYTA
Sbjct: 1172 HSARAFSDKIDVVIDFPILGLDISDFVSNPTIKKEDCVYDLIAVDNHYGGLGGGHYTASV 1231
Query: 874 K 874
K
Sbjct: 1232 K 1232
>gi|453085067|gb|EMF13110.1| UCH-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1550
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 210/416 (50%), Gaps = 47/416 (11%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELAL 370
K G+ G GLQNLGNTC+MNSALQC+ +LA YF Y +IN NPLG HG +A
Sbjct: 502 KNGKTRGTVGLQNLGNTCYMNSALQCIRSVEELAIYFYTKKYKKDINNGNPLGYHGAMAN 561
Query: 371 AFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ +++ ++ + + +PR FK L R P FSGY Q DSQE L+FL+D +HEDLNR+
Sbjct: 562 AYQTVIQGIYGNNTGGSFSPRDFKNTLGRHQPMFSGYGQQDSQEFLSFLVDAIHEDLNRI 621
Query: 430 KQKPYIEMKDSGGR----PD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPY+E DS P+ E+ KNHK RNDS+ +D+F G YK+ + CP C+K
Sbjct: 622 DKKPYVENPDSDDSKVHDPEYIRELGETYQKNHKLRNDSIAMDLFGGFYKNKMECPDCNK 681
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDP+ +T+ LP + +T Y G P+ + + K+ K L L+
Sbjct: 682 VSVTFDPYSLVTVQLPMEIAFQHDIT--YIPLHGRPLLHHIDIDKNSPIKALKEVLAKKH 739
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYRFDR--KQGGKIKLEIVN 600
+ + EVYNH+I++ +++ + S I ++H+ + ++ + K + +N
Sbjct: 740 PGADASRMWMVEVYNHKIYKVYDDSTVIAESGILANDHLFIFELEQTPRNAAKRSYDSLN 799
Query: 601 RWQEKSASDYLKGSERKLFGAPLVT----------------YLEEEHLSGADID------ 638
+ A D + + F P+ Y+ D D
Sbjct: 800 KVNAVPA-DGMAAPQADTFAVPVFQRTKSNQSGYSLSDHPIYITVSREEAKDYDTILKKV 858
Query: 639 -IAVSKLLS-PLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSR 692
IAV+ L S P+ + + E +P ++EL + N S E+A + D ++
Sbjct: 859 LIAVANLTSRPILKEF---------EEDTIPNRVEELEDEQNGSEESAVVSDHSAQ 905
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+++ ++L C D E L D+ WYC +CKE R+ATK L++W LPD+LV HLKRF +
Sbjct: 1203 KKKGVNLDECFDVTSRSEVLSEDNAWYCNRCKELRRATKTLEIWTLPDILVVHLKRFGGN 1262
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSK-DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++K+D V++PI LD++ + K DG+ Y+YDLFA+ NHYGGLGGGHYTA AK
Sbjct: 1263 RSFRDKVDLLVDYPIQGLDMTDRVGVKEDGKEYIYDLFAVDNHYGGLGGGHYTAMAK 1319
>gi|221057023|ref|XP_002259649.1| Ubiquitin carboxyl-terminal hydrolase 2 [Plasmodium knowlesi strain
H]
gi|193809721|emb|CAQ40423.1| Ubiquitin carboxyl-terminal hydrolase 2,putative [Plasmodium
knowlesi strain H]
Length = 1318
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 151/255 (59%), Gaps = 13/255 (5%)
Query: 277 SNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQ 336
S+G T GY + + G T +MD + E GG GL NLGNTCF+NS+LQ
Sbjct: 274 SSGRTGGYASTTH---TLGYTQENMDK-----QISYIFEHGGDRGLINLGNTCFLNSSLQ 325
Query: 337 CLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAA--VAPRAFK 393
CL + YFL G + + IN NP+G +G LA A+ + L +LW + + AP+A K
Sbjct: 326 CLAKIKKFSNYFLSGTFWNHINYSNPVGQNGRLAKAYYETLLELWKINKRSEPYAPKALK 385
Query: 394 GKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG--RPDEEVANE 451
++ +F GY QHDSQELLAFLLDGLHEDLN +++KPY E K GG + D +VA
Sbjct: 386 LAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEKLQGGLDKLDIDVAEA 445
Query: 452 CWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W HK N+S+IVD+FQGQY+S L CP C KVSI FDPFMYL++PLP + V
Sbjct: 446 SWNRHKEINNSIIVDLFQGQYRSRLQCPQCKKVSIAFDPFMYLSIPLPPKKNHRIWFHVI 505
Query: 512 YANGSGLPMPFTVTL 526
+ M F+ +
Sbjct: 506 LNRDVPIGMRFSCSF 520
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Query: 760 QEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS- 818
+E + +CL F EE L ++ WYC CK H QA KKLDL+ +P +L+ HLKRF+ +
Sbjct: 1126 EERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHVQAYKKLDLFRMPIILILHLKRFNNTN 1185
Query: 819 RYLKNKLDTFVNFP------------ILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
R+L+ K+D++V +P IL L +K S +Y+L ++ H GGL G
Sbjct: 1186 RWLRTKIDSYVYYPHKENEYLDMAPYILEDGLKHMIKMDPTYSPLYELIGVNCHTGGLCG 1245
Query: 867 GHYTAYAKVNA 877
GHY AY K+N
Sbjct: 1246 GHYFAYVKLNG 1256
>gi|298706544|emb|CBJ29514.1| similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin
thiolesterase 15) (Ubiquitin-specific processing protease
15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform
11 [Ectocarpus siliculosus]
Length = 1972
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 193/378 (51%), Gaps = 60/378 (15%)
Query: 277 SNGHTTGYRFNQYPGSS-FGSTFMDMDDGYDSY---------NTAKKGEKGGLAGLQNLG 326
SNG+ G R P ++ GST DG +Y NT K G GL N+G
Sbjct: 952 SNGNGWGARSQSMPRTNGTGSTA----DGISNYGGGALNRRSNTPGKPPVPGACGLVNVG 1007
Query: 327 NTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
NTC++NSA+QCL HTP + Y L D ++ E+N NPLG G+L F LL+ LWS
Sbjct: 1008 NTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYL 1067
Query: 386 AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS----- 440
+ P FK L ++ PQF+G Q DSQE LA +LD LHED+NRV KPY+ D
Sbjct: 1068 CIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYVAAPDDDDDAE 1127
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GR D+++A+E W H RN S+IVD+FQGQ K C VC+K S+TFDPFMYL++P+P
Sbjct: 1128 SGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPV 1187
Query: 501 TVTRTMTV-------TVFYANGSGL-----------------------PMPFTVTLMKHG 530
+ + V T + SGL P+ + + L + G
Sbjct: 1188 RNEKMVAVVMLPRIRTRYLVRSSGLNGEDGAMASDGGGAQFSNPRQLVPVQYGMMLPRLG 1247
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQ 590
DL ALS C + +++A + +QI + EL++ ++DD +VA
Sbjct: 1248 ELSDLKRALSDLCGIPTVS-IVVAILQQNQIKVMQDK--ELLTELRDDTWVVALEMQ--- 1301
Query: 591 GGKIKLEIVNRWQEKSAS 608
G+I L NR + S S
Sbjct: 1302 -GEINL---NRRAKPSTS 1315
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
++L CLDA+ EE +D WYC C+ HR+ K+DLW +PDVLV H+KRF S
Sbjct: 1789 GLTLEQCLDAYTREETFEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARW 1848
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGE---------SYVYDLFAISNHYGGLGGGHYTAY 872
+ K+ T V FP LD+S ++ S VYDLF + NH GG+ GGHYTAY
Sbjct: 1849 REKIRTLVLFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLFGVVNHMGGMTGGHYTAY 1908
Query: 873 AK 874
+
Sbjct: 1909 CR 1910
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 60 YVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEG 119
+ G+ P+++ ++ + V + A RP IDNS + G + EV NL+ G
Sbjct: 414 HAQGESPAMERLA-GAGKERAVPTTLARRPHEIDNSSL-------QGGAEWEVAPNLDLG 465
Query: 120 QDYVLVPQQVWEKLFCWYKGGPALPRKMIS 149
+DYV++P+ +W+ + WY GGP R++++
Sbjct: 466 EDYVMLPKSLWDVMVDWYGGGPVFARQVVN 495
>gi|147902826|ref|NP_001082871.1| ubiquitin carboxyl-terminal hydrolase 43 [Danio rerio]
gi|126632447|emb|CAM56644.1| novel protein similar to vertebrate ubiquitin specific protease 43
(USP43) [Danio rerio]
Length = 1122
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 281/627 (44%), Gaps = 119/627 (18%)
Query: 314 GEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGM------H 365
GEK G+ GL+N GNTCFMN+ +QCL +T LA+Y L Y E+N GM
Sbjct: 107 GEKTPGVQGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNERRINGMMKSEEVR 166
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE+ L+R LW++ FK +A++ QF G QHD+ E L +LLD +HED
Sbjct: 167 GEVTDKLASLVRALWTNDYTPQLSVDFKSVVAKYGSQFKGNAQHDALEFLLWLLDCVHED 226
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
N + S +P S + + FQ QY+S+L CP C K S
Sbjct: 227 AN-LSTNNNQSRNSSSSKP-------------GTRHSFVQEHFQAQYRSSLTCPHCLKQS 272
Query: 486 ITFDPFMYLTLPLPSTVTRTMTVT-VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACC 544
TFDPF+ ++LP+P TR + VT VF G ++ G L ++ST
Sbjct: 273 NTFDPFLCISLPIPLRQTRALNVTLVFSTEGQ--------RFLRIGLAVPLFGSISTLRA 324
Query: 545 LKIDEG------LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY------------RF 586
+ +EG ++L E+ + R F + ++ +SI + + I A+ RF
Sbjct: 325 MVAEEGKLSPDQVILTEMNSGGFQRSFSDEDDM-TSISESDVIYAFQVPPHFTRGGSMRF 383
Query: 587 DRKQG------GKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHL 632
+G G + E +N +S L G + FG P + +E L
Sbjct: 384 SDFKGHRLPPSGTLSTEFLN---HGGSSKVLLLICNVAGSGQQATRFGPPFLMRVERT-L 439
Query: 633 SGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSR 692
S + +V L ++T I ++S + V CS
Sbjct: 440 SWDHLQQSVCNKLYVFQKT-----------------AIIKVSTTELFKVRVVGGSASCS- 481
Query: 693 ELSFQLSLTDERISSCKPIQKDSILK---PGK--HIKVLLDWTDDVHEL----YDPSYIK 743
LS D R C P D LK PG H+K++++W + + E I+
Sbjct: 482 ----YLSPHDSR-PLCHPTV-DRALKLCGPGGPLHVKLIIEWDNKIKECLFGNIQEEVIE 535
Query: 744 DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWM 803
D V +Q + +L C + EE L PDD W CP CK+ +Q K+ LW
Sbjct: 536 DAESVRIQ--QQNHVQQHSCTLDDCFQLYTKEEQLAPDDAWKCPHCKQMQQGMVKMSLWT 593
Query: 804 LPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDL-------SKYMKS--------KDGE 848
LPD+L+ HLKRF +NKL T + FP+ LD+ S+ MK+ K GE
Sbjct: 594 LPDILILHLKRFRQVGKRRNKLSTLIRFPVSALDMTPHVVKRSQSMKNLAPLPSTWKHGE 653
Query: 849 S-YVYDLFAISNHYGGLGGGHYTAYAK 874
+ ++YDL+A+ NH+GG+ GGHYTAY +
Sbjct: 654 TDFLYDLYAVCNHHGGMHGGHYTAYCR 680
>gi|344234824|gb|EGV66692.1| hypothetical protein CANTEDRAFT_117870 [Candida tenuis ATCC 10573]
Length = 1163
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 157/267 (58%), Gaps = 18/267 (6%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDL 375
GG +GL NLGNTC+MNSALQCLVH P++ YF D + E+N NPLG +G +A +FG L
Sbjct: 304 GGHSGLINLGNTCYMNSALQCLVHVPEINYYFFFDLFMKELNKTNPLGYNGNMAQSFGSL 363
Query: 376 LRKLWS------SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
L KL+S + A++PR FK + ++ F GY Q DSQE L++LLD LHEDLNR+
Sbjct: 364 LHKLFSDQSVNGTSLNALSPREFKYTIGHYSSMFQGYQQQDSQEFLSWLLDSLHEDLNRI 423
Query: 430 KQKPYIE---MKDSGGRPDEEV---ANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
KPY+E +KD E + A+ W +K RNDS+IVD+F G Y+S LVCP C K
Sbjct: 424 HDKPYLEKPELKDEDIDNPEAIKRLADISWDQYKKRNDSVIVDLFSGLYQSVLVCPDCGK 483
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTV----FYANGSGLPMPFTVTLMKHGCCKDLILAL 539
SIT+DPF LTLPLP T TV F M + L K ++L+ L
Sbjct: 484 TSITYDPFNDLTLPLPIEKKWYHTFTVVNLDFNQQVPDRIMKLQIELNKTSNYEELLSYL 543
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFE 566
+ + D L L E++N +++ F+
Sbjct: 544 TRFLNVPKD-FLFLYEIFNDYVYQDFQ 569
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 13/150 (8%)
Query: 720 GKHIKVLLDWTDDVHE-LYDPS-----YIKDLP----VVHKTGFTVKKTRQEAISLFSCL 769
G + ++ +W +HE L++ + +K++P +K K ++ ISL+ CL
Sbjct: 862 GPNTLLVCEWDSQIHEQLFNANTRTWEILKEIPNPELEANKAKLIAK--QKSTISLYDCL 919
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
D F E LG D+WYCP+CK+H+QATK + +W D+L HLKRF +R +K+D V
Sbjct: 920 DKFYQPEVLGDQDLWYCPRCKDHKQATKTIKIWNTGDILTIHLKRFQVARSFSDKIDVTV 979
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISN 859
+FPI LD+S+Y+ S D E YDL A+ N
Sbjct: 980 DFPIEGLDMSQYVNSPDRE-LTYDLIAVDN 1008
>gi|146415514|ref|XP_001483727.1| hypothetical protein PGUG_04456 [Meyerozyma guilliermondii ATCC
6260]
Length = 1169
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 182/343 (53%), Gaps = 26/343 (7%)
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
NLGNTC+MNSALQCL+H P++ YF D ++ E+NT N LG GE+A+AF LL K +
Sbjct: 342 FSNLGNTCYMNSALQCLLHVPEVNNYFFLDIHNKELNTTNALGFKGEVAMAFASLLHKAF 401
Query: 381 --SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+S ++V+PR FK + ++ F GY Q DSQE L++LLD LHEDLNR+ KPY E
Sbjct: 402 DPTSLVSSVSPRDFKYTIGHYSSMFLGYQQQDSQEFLSWLLDALHEDLNRILNKPYSEKP 461
Query: 439 D------SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ R E+A +CW HK RNDS+IVD+F G Y+STLVCP C K SITFDPF
Sbjct: 462 ELSDDDIGNQRAIMELAEKCWMQHKQRNDSVIVDLFTGLYQSTLVCPDCGKTSITFDPFS 521
Query: 493 YLTLPLPSTVTRTMTVTVFYANGS---GLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
LTLPLP T+TV + ++L K L+L LS L
Sbjct: 522 DLTLPLPIEKKWFHTITVVDMSDKLSLNKIKTLEISLPKSSTFDSLVLYLSEFFHLP-RH 580
Query: 550 GLLLAEVYNHQIFRFFENPAELISSI-------KDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E+YN I + F+ + + +DD+H V Y I + + +
Sbjct: 581 YFFVFELYNDAIIKNFQEEYQQLKFFPINELLAEDDDHYV-YIIPHDPSRDIIVPVFSTL 639
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEE-EHLSGADIDIAVSKL 644
++ S + + FG PL L+E E L A + + +L
Sbjct: 640 EDSDPSYKMVHA----FGIPLFLVLDENERLDYAVVQSKIEEL 678
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
V + +K R+ + L CL +F T E LG D+WYCP+CK+H++ATK + +W D
Sbjct: 900 AVEASRLKAEKQRRTTVLLVDCLQSFSTPEVLGEFDLWYCPRCKDHKRATKTIQIWSTGD 959
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+L HLKRF +R +K+D V+FPI LD+S ++ D ES +YDL A+ NHYGGLGG
Sbjct: 960 ILTIHLKRFQSARSFSDKIDLTVDFPIEGLDMSNFVAGGD-ESLIYDLIAVDNHYGGLGG 1018
Query: 867 GHYTAYAK 874
GHYTA K
Sbjct: 1019 GHYTASVK 1026
>gi|403166985|ref|XP_003326813.2| S-formylglutathione hydrolase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166808|gb|EFP82394.2| S-formylglutathione hydrolase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1410
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 150/259 (57%), Gaps = 42/259 (16%)
Query: 294 FGSTFMDMDDGYDSYNTAKKGEKG----GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL 349
F T + D ++N+A+ K GL GL NLGNTCFMNSALQCL + P+L YFL
Sbjct: 315 FSITSPNSDLSLVAFNSAQSAFKARGIRGLVGLTNLGNTCFMNSALQCLSNCPELKTYFL 374
Query: 350 GD-YSDEINTENPLGMHGELALAFGDLLRKLWSS------------------------GR 384
Y +E+N NPLGM G++A FG L+ ++WSS
Sbjct: 375 SRVYINELNRTNPLGMGGKVAETFGQLIERMWSSEYEVSRRIQGSTSGTNGPTSYGGSSH 434
Query: 385 AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD----- 439
+++PR FK + RF F GY Q DSQELL FLLD LHEDLNRVK KP+ E+ D
Sbjct: 435 QSISPREFKSIVGRFNSLFLGYGQQDSQELLTFLLDALHEDLNRVKVKPFDEIPDYDDQN 494
Query: 440 SGGRPDEE------VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
S P E +A CW ++ RNDS+IVD+FQGQYKSTL+CP C+KV+I FD MY
Sbjct: 495 SLNDPLLEAQKILKLAKTCWNLYRRRNDSVIVDLFQGQYKSTLICPDCNKVAIKFDEIMY 554
Query: 494 LTLPLPSTVTRTMTVTVFY 512
LTL LP + + T+++
Sbjct: 555 LTLQLP--INKKFRGTIYF 571
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 738 DPSYIKDLPVVHKTGFTVKKTRQEA--ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQA 795
DP I+D +V K A +++ C F E LG +D WYCP+CK H QA
Sbjct: 896 DPPVIEDPELVASRVAEQNKKSGAAGELTIEECFKDFSKPEKLGSEDKWYCPRCKNHVQA 955
Query: 796 TKKLDLWMLPDVLVFHLKRFSYSRY---LKNKLDTFVNFPILNLDLSKYMK 843
TK++ +W +PD+LV H KRFS +R +K+D FV+FPI LDLS ++
Sbjct: 956 TKQMQIWKVPDILVVHFKRFSSARTSYGRSSKVDNFVDFPIQGLDLSNEVE 1006
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 24/26 (92%)
Query: 849 SYVYDLFAISNHYGGLGGGHYTAYAK 874
S +YDLFA+ NH+GGLGGGHYTA+AK
Sbjct: 1122 SLIYDLFAVDNHFGGLGGGHYTAFAK 1147
>gi|299473323|emb|CBN77722.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1943
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 216/480 (45%), Gaps = 122/480 (25%)
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++++ RPG I N ++++G + R G D+ ++P + W+ L WY+GGP
Sbjct: 730 ATQQTPRPGQIHNGALLEHGGSR------RIVRAARLGPDFAIIPPKAWDALQSWYEGGP 783
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQ-LYEKVCKL---- 196
L R++I ++E+F L LKL + ++ + R+ L+ KV K+
Sbjct: 784 VLERRVID--YHGTPQLELFPLSLKLQYRHQVASCDVKGKPRQFEREMLFSKVDKVSDVV 841
Query: 197 ------RGIEQEKARIWDY-----FNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDN 245
+E E++R+W+Y + KQ +P TL++A L Q +LLE+ +
Sbjct: 842 KQLSEANKVEPERSRLWNYADRVDWKKQHVLTP----GHTLEEAKLLDGQLVLLEISQQD 897
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDM---- 301
G +P S STF
Sbjct: 898 G-----------------------------------------AWPRSQLQSTFEAEEEEA 916
Query: 302 DDGYDSYNTAKKGEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTE 359
G K G G G+ GL NLGNTC++NS++QCL HTP L +YFL Y +++N +
Sbjct: 917 QAGTAVSGHNKAGVIGDGMVGLGNLGNTCYINSSVQCLSHTPLLTEYFLSSAYVNDVNVD 976
Query: 360 NPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
N LG+ QELLAFLL
Sbjct: 977 NKLGL-----------------------------------------------QELLAFLL 989
Query: 420 DGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
+GL+EDLNR+ KPYIE DS GR D E+A+ WKNH R S++V +F GQ+KS L C
Sbjct: 990 NGLNEDLNRIADKPYIEQPDSDGRSDAELADIWWKNHLRREFSIVVALFAGQFKSVLACR 1049
Query: 480 VCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
C S F+PFM+L LPLP R++ V V +G+ P ++ L K G DL+ A+
Sbjct: 1050 ECGYESARFEPFMFLQLPLPENTERSVMVIVVLLDGARCPAKCSLRLPKSGRVSDLVRAI 1109
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 725 VLLDWTDDV-HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDM 783
V +DW V E YD S ++H + K +SL CLD F +E +
Sbjct: 1557 VGVDWHISVIKEHYDASEALSC-LLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEG-- 1613
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CKE R A+KK+D+W LP +L LKRF Y++Y + KL V+FP+ LDLS Y+
Sbjct: 1614 -YCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVHFPVNGLDLSPYV 1671
>gi|403345455|gb|EJY72093.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1076
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 129/191 (67%), Gaps = 1/191 (0%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G GL NLGNTC+MNS+LQCL + +L +YFL + + +++N +NPLG G L A+
Sbjct: 368 RDGKVGLGNLGNTCYMNSSLQCLSNCYELTRYFLDERFKEDLNVDNPLGTSGRLVQAYAK 427
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL ++W+ + V P FK L +A QF G+ QHDSQE + +LD L EDL R +KPY
Sbjct: 428 LLNEMWNQEDSVVRPHMFKRILGEYAQQFQGFGQHDSQECINSILDLLSEDLYRKPKKPY 487
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E ++G R D+ A E W H RN+S+IVD+F GQYKSTLVC +CS+VS+TFDPFM L
Sbjct: 488 VEQTEAGDRSDDVAAQEAWLKHLVRNESVIVDLFHGQYKSTLVCSICSRVSVTFDPFMTL 547
Query: 495 TLPLPSTVTRT 505
+LP+P R
Sbjct: 548 SLPIPGKKERV 558
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
T +K AI+L CL+ F E L D+MWYC +CKEH QATK L L+ LP VLV +LK
Sbjct: 881 TTQKDESSAITLQDCLEEFERPEMLDQDNMWYCNKCKEHVQATKSLKLFRLPLVLVINLK 940
Query: 814 RFSYSRYL------KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLG 865
RF + + + KL T V+FP+ LDL ++ DG+ Y+YDLF +SNH+GG G
Sbjct: 941 RFKHGKRMSMYGAGNGKLQTLVDFPLQGLDLQPHIIRNGPDGQEYIYDLFGVSNHFGGCG 1000
Query: 866 GGHYTAYA 873
GGHYTAYA
Sbjct: 1001 GGHYTAYA 1008
>gi|145502154|ref|XP_001437056.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404203|emb|CAK69659.1| unnamed protein product [Paramecium tetraurelia]
Length = 946
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GLQNLGNTCFMNS +QC+ +T + +Y L + Y +IN N LG GELA F LL
Sbjct: 332 GKVGLQNLGNTCFMNSGIQCIGNTFPIREYLLSNQYKQDINELNTLGTKGELAQKFAHLL 391
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R++W + R + P + K + +F PQF G+ QHDSQEL+ +LLDGL+EDL R+KQKPY+E
Sbjct: 392 RRMWYAERTPIPPFSLKRAIGKFQPQFQGFQQHDSQELITYLLDGLNEDLCRIKQKPYVE 451
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD GRPD EVA E W+ K RNDS+IVD GQYKSTL CP C+K+SITFDP++ + +
Sbjct: 452 RKDYDGRPDFEVAKESWEQFKLRNDSIIVDNLYGQYKSTLRCPNCNKISITFDPYLMVNV 511
Query: 497 PLPSTVTRTMTVTVFYAN 514
+P T+ + + N
Sbjct: 512 SIPQNTTKKLEIQFIDPN 529
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
+P + T V+ ++++ L CL E L ++ WYC QCK+H +A K ++++
Sbjct: 825 IPTIQPTN--VQGATEKSMKLTECLKFSEQPEQLDEENTWYCNQCKDHVRAFKVMEIYKT 882
Query: 805 PDVLVFHLKRFSYS-RYLKNKLDTFVNFPILNLDLSKYMKS 844
P +L+FHLKRF S ++ K+KL+T ++FPI N D+ +++++
Sbjct: 883 PKILIFHLKRFKNSNKFFKSKLETLIDFPIENFDIREFVQN 923
>gi|403361735|gb|EJY80573.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1076
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 159/264 (60%), Gaps = 15/264 (5%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G GL NLGNTC+MNS+LQCL + +L +YFL + + +++N +NPLG G L A+
Sbjct: 368 RDGKVGLGNLGNTCYMNSSLQCLSNCYELTRYFLDERFKEDLNVDNPLGTSGRLVQAYAK 427
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
LL ++W+ + V P FK L +A QF G+ QHDSQE + +LD L EDL R +KPY
Sbjct: 428 LLNEMWNQEDSVVRPHMFKRILGEYAQQFQGFGQHDSQECINSILDLLSEDLYRKPKKPY 487
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E ++G R D+ A E W H RN+S+IVD+F GQYKSTLVC +CS+VS+TFDPFM L
Sbjct: 488 VEQTEAGDRSDDVAAQEAWLKHLVRNESVIVDLFHGQYKSTLVCSICSRVSVTFDPFMTL 547
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
+LP+P + V F+ +P+ +T ++ + S C D + +A
Sbjct: 548 SLPIPG---KKEKVGFFF-------VPYNITPEYKNFKGEVFMRESDTIC---DFRVQVA 594
Query: 555 EVYNHQIFRFFENPAELISSIKDD 578
Y+ + F F+ + L++ I D+
Sbjct: 595 AKYSDEKFP-FDASSFLVTLIADN 617
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 8/128 (6%)
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
T +K AI+L CL+ F E L D+MWYC +CKEH QATK L L+ LP VLV +LK
Sbjct: 881 TTQKDESSAITLQDCLEEFERPEMLDQDNMWYCNKCKEHVQATKSLKLFRLPLVLVINLK 940
Query: 814 RFSYSRYL------KNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLG 865
RF + + + KL T V+FP+ LDL ++ DG+ Y+YDLF +SNH+GG G
Sbjct: 941 RFKHGKRMSMYGGGNGKLQTLVDFPLQGLDLQPHIIRNGPDGQEYIYDLFGVSNHFGGCG 1000
Query: 866 GGHYTAYA 873
GGHYTAYA
Sbjct: 1001 GGHYTAYA 1008
>gi|145523073|ref|XP_001447375.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414886|emb|CAK79978.1| unnamed protein product [Paramecium tetraurelia]
Length = 1010
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 136/198 (68%), Gaps = 1/198 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTCFMNS +QC+ +T + +Y L + Y +IN N LG GELA + LL
Sbjct: 332 GKVGLKNLGNTCFMNSGIQCIGNTFPIREYLLSNQYKQDINELNTLGTKGELASKYAHLL 391
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R++W + R + P + K + +F PQF G+ QHDSQEL+ +LLDGL+EDL R+KQKPY+E
Sbjct: 392 RRMWYADRTPIPPFSLKRAIGKFQPQFQGFQQHDSQELITYLLDGLNEDLCRIKQKPYVE 451
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD GRPD EVA E W+ K RNDS+IVD GQYKSTL CPVC+K+SITFDP++ + +
Sbjct: 452 RKDYDGRPDFEVAKESWEQFKLRNDSIIVDNLYGQYKSTLRCPVCNKISITFDPYLMVNV 511
Query: 497 PLPSTVTRTMTVTVFYAN 514
+P T+ + + N
Sbjct: 512 SIPQNTTKKLEIQFIDPN 529
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 91/146 (62%), Gaps = 18/146 (12%)
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
+P + T +K ++++ L CL E L ++ WYC QCK+H +A K ++++
Sbjct: 826 IPTIQPTN--IKVGTEKSMKLGECLKFSEEPEQLDEENTWYCNQCKDHVRAFKVMEIYKT 883
Query: 805 PDVLVFHLKRFSYS-RYLKNKLDTFVNFPILNLDLSKYMK---------SKDGES----- 849
P +L+FHLKRF S ++ K+KL+T ++FPI + D+ ++++ ++D E+
Sbjct: 884 PKILIFHLKRFKNSNKFFKSKLETLIDFPIQDFDIREFVQNHHLPSEFHTEDPENPKFNN 943
Query: 850 -YVYDLFAISNHYGGLGGGHYTAYAK 874
YDL+AISNH+GGLGGGHYTA+AK
Sbjct: 944 PIYYDLYAISNHFGGLGGGHYTAFAK 969
>gi|321250129|ref|XP_003191699.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317458166|gb|ADV19912.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1310
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 132/196 (67%), Gaps = 7/196 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G+ GL+NLGNTC+MNS +QCL T + +FL G +S IN ENPLG GELA A+ +LL
Sbjct: 947 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFSRSINKENPLGTKGELAKAWAELL 1006
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK-PYI 435
R LWS ++P F+ ++ FAPQF G +QHDSQE L+F+LDGLHEDLNR+K+K P +
Sbjct: 1007 RVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPPPV 1066
Query: 436 EMKDSG-----GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
EM P E + W ++ RNDSLIVD+FQGQY++ L C C K S T+D
Sbjct: 1067 EMTPEREAMLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDA 1126
Query: 491 FMYLTLPLPSTVTRTM 506
FMY++LP+PS T+ +
Sbjct: 1127 FMYMSLPVPSGKTKVV 1142
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 22/128 (17%)
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDT 827
+D F+ E + ++ WYCP+CK +R+A+K L + LP VL+ LKRF+ L +K +T
Sbjct: 1147 IDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFWDKSET 1206
Query: 828 FVNFPILNLDLSKYMKSKDGES---------------------YVYDLFAISNHYGGLGG 866
V FPI LDL++Y+ G S + YDL+ +SNH G L
Sbjct: 1207 PVIFPIRGLDLTRYLPGPAGSSVGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHMGTLSS 1266
Query: 867 GHYTAYAK 874
GHYTA+ K
Sbjct: 1267 GHYTAFVK 1274
>gi|451850604|gb|EMD63906.1| hypothetical protein COCSADRAFT_161272 [Cochliobolus sativus ND90Pr]
Length = 2144
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 203/389 (52%), Gaps = 41/389 (10%)
Query: 225 TLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGY 284
TL DA L DQ I+LE D G ++ E S++ A L + T+G
Sbjct: 1058 TLADAGLTQDQTIILE-------EHDEKGEYISDTTKEASKNKAGAAASKGLQSTTTSGR 1110
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
N G + + G+ G GL NLGNTC+MNSALQCL +L
Sbjct: 1111 --NTPTGGPL------------TRGRKQNGKVRGHVGLTNLGNTCYMNSALQCLRSVEEL 1156
Query: 345 AQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQ 402
+ YFL + + +E+N +NP+G G +A ++ LL ++S ++++P+ FK KL R
Sbjct: 1157 SMYFLSNKWKEEVNADNPIGHKGVIAKSYASLLSAIYSLDNNSSISPKDFKQKLGRANSL 1216
Query: 403 FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG---RPDEEVAN--ECWK-NH 456
FSGY Q DSQE +++L+D LHEDLNR+ +KPY E DS R E V E ++ NH
Sbjct: 1217 FSGYGQQDSQEFVSWLVDALHEDLNRIHKKPYRENPDSEDDTYRDLEAVKKLGEIYRDNH 1276
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
+ARN+S+ +D+F G YK+T+VCP C KVSITFDP+ LTL LP + +T T T+ Y
Sbjct: 1277 RARNNSVAMDLFSGFYKNTMVCPDCEKVSITFDPYSQLTLQLP--IEQTWTHTITYVPLY 1334
Query: 517 GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI-SSI 575
G P V + K+ K L + ++ +E+Y+H+ +R E+ + S+I
Sbjct: 1335 GKPYQLEVDIDKNATIKTLKEFVGKRGGGVPANRIMASELYSHKFYRHLEDSLTVSESNI 1394
Query: 576 KDDEHIVAYRFD---------RKQGGKIK 595
+ I Y D +K+G K K
Sbjct: 1395 GARDDIYFYELDMAPSNWPAPKKKGSKYK 1423
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 725 VLLDWTDD-VHELY------DP---SYIK-----DLPVVHKTGFTVKKTRQEAISLFSCL 769
++LDWT + + L+ DP IK D P + R+ I+L C
Sbjct: 1740 IVLDWTSEAIDALFGGTSDEDPRGADVIKSIEVFDDPEIRDKKAKRAARRKNGINLDECF 1799
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
E L D+ WYC +CKE R+ATK L++W +PD+L+ HLKRFS R ++K++ V
Sbjct: 1800 TESSKSEVLSEDNAWYCSRCKELRRATKTLEIWTVPDILIIHLKRFSGHRTFRDKIEDLV 1859
Query: 830 NFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+FP+ LDLS + +G+ YDLFA+ NHYGGLGGGHYTA A+
Sbjct: 1860 DFPVEGLDLSGKVGYPEGKDLTYDLFAVDNHYGGLGGGHYTATAQ 1904
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 37/224 (16%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWY-RSWERYVCGDEPSIDNISFDSP 76
LP ++ +++ + ++ +D +EG ++IS RW R W R + +N+S
Sbjct: 783 LPSIDEQVTRVMGMMNSEPLVDRQEG---YIISERWLERVWAR-------TSENVS---- 828
Query: 77 HMNGVSSKRAERP-GPIDNS-----DIIQNGNGSSEGDD-LEVRRNLEEGQDYVLVPQQV 129
S + + P GP+DNS +++Q G+D + + + GQD+ ++P++
Sbjct: 829 RPQDFSKEATQGPVGPVDNSHLVDTELLQEDLADQRGEDFIPLSKAATLGQDFEVLPRKA 888
Query: 130 WEKLFCWY---KGGPALPR-------KMISEGIVNEKRVEVFXL--CLKLIDSRDNSQTV 177
WE + WY KG P + R +E I E V + K + DNS+
Sbjct: 889 WELVLSWYGLNKGSPVIRRYAHNTVPGQANEDISYELHPPVITIRKVRKSANPADNSKLA 948
Query: 178 IRL--SKKASTRQLYEKVCKLRGIE-QEKARIWDYFNKQRSTSP 218
++ S+ S E K GI+ K RIW + + +P
Sbjct: 949 EKIVASRYESFITFLEAAKKAVGIDLNNKVRIWRILSTAPTVNP 992
>gi|190347982|gb|EDK40358.2| hypothetical protein PGUG_04456 [Meyerozyma guilliermondii ATCC
6260]
Length = 1169
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 183/343 (53%), Gaps = 26/343 (7%)
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
NLGNTC+MNSALQCL+H P++ YF D ++ E+NT N LG GE+A+AF LL K +
Sbjct: 342 FSNLGNTCYMNSALQCLLHVPEVNNYFFLDIHNKELNTTNALGFKGEVAMAFASLLHKAF 401
Query: 381 --SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+S ++V+PR FK + ++ FSGY Q DSQE L++LLD LHEDLNR+ KPY E
Sbjct: 402 DPTSSVSSVSPRDFKYTIGHYSSMFSGYQQQDSQEFLSWLLDALHEDLNRILNKPYSEKP 461
Query: 439 D------SGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ R E+A +CW HK RNDS+IVD+F G Y+STLVCP C K SITFDPF
Sbjct: 462 ELSDDDIGNQRAIMELAEKCWMQHKQRNDSVIVDLFTGLYQSTLVCPDCGKTSITFDPFS 521
Query: 493 YLTLPLPSTVTRTMTVTVF---YANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDE 549
LTLPLP T+TV + S ++L K L+ LS L
Sbjct: 522 DLTLPLPIEKKWFHTITVVDMSDKSSSNKIKTLEISLPKSSTFDSLVSYLSEFFHLP-RH 580
Query: 550 GLLLAEVYNHQIFRFFENPAELISSI-------KDDEHIVAYRFDRKQGGKIKLEIVNRW 602
+ E+YN I + F+ + + +DD+H V Y I + + +
Sbjct: 581 YFFVFELYNDAIIKNFQEEYQQLKFFPINELLAEDDDHYV-YIIPHDPSRDIIVPVFSTL 639
Query: 603 QEKSASDYLKGSERKLFGAPLVTYLEE-EHLSGADIDIAVSKL 644
++ S + + FG PL L+E E L A + + +L
Sbjct: 640 EDSDPSYKMVHA----FGIPLFLVLDENERLDYAVVQSKIEEL 678
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Query: 747 VVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPD 806
V + +K R+ +SL CL +F T E LG D+WYCP+CK+H++ATK + +W D
Sbjct: 900 AVEASRLKAEKQRRTTVSLVDCLQSFSTPEVLGEFDLWYCPRCKDHKRATKTIQIWSTGD 959
Query: 807 VLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGG 866
+L HLKRF +R +K+D V+FPI LD+S ++ D ES +YDL A+ NHYGGLGG
Sbjct: 960 ILTIHLKRFQSARSFSDKIDLTVDFPIEGLDMSNFVAGGD-ESLIYDLIAVDNHYGGLGG 1018
Query: 867 GHYTAYAK 874
GHYTA K
Sbjct: 1019 GHYTASVK 1026
>gi|58259279|ref|XP_567052.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107425|ref|XP_777597.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260291|gb|EAL22950.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223189|gb|AAW41233.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1312
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 132/196 (67%), Gaps = 7/196 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G+ GL+NLGNTC+MNS +QCL T + +FL G ++ IN ENPLG GELA A+ +LL
Sbjct: 949 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPLGTKGELAKAWAELL 1008
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK-PYI 435
R LWS ++P F+ ++ FAPQF G +QHDSQE L+F+LDGLHEDLNRVK+K P +
Sbjct: 1009 RVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRVKRKPPPV 1068
Query: 436 EMKDSG-----GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
EM P E + W ++ RNDSLIVD+FQGQY++ L C C K S T+D
Sbjct: 1069 EMTPEREAMLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDA 1128
Query: 491 FMYLTLPLPSTVTRTM 506
FMY++LP+PS T+ +
Sbjct: 1129 FMYMSLPVPSGKTKVV 1144
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 22/128 (17%)
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDT 827
+D F+ E + ++ WYCP+CK +R+A+K L + LP VL+ LKRF+ L +K +T
Sbjct: 1149 IDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFWDKSET 1208
Query: 828 FVNFPILNLDLSKYMKSKDGES---------------------YVYDLFAISNHYGGLGG 866
V FPI LDL++Y+ G S + YDL+ +SNH G L
Sbjct: 1209 PVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHMGTLSS 1268
Query: 867 GHYTAYAK 874
GHYTA+ K
Sbjct: 1269 GHYTAFVK 1276
>gi|444323878|ref|XP_004182579.1| hypothetical protein TBLA_0J00600 [Tetrapisispora blattae CBS 6284]
gi|387515627|emb|CCH63060.1| hypothetical protein TBLA_0J00600 [Tetrapisispora blattae CBS 6284]
Length = 1462
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 175/343 (51%), Gaps = 36/343 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTC+MNSALQCL+H P +YFL Y EIN +NP+G G +A AFG L+
Sbjct: 412 GTLGLVNLGNTCYMNSALQCLIHLPKFNEYFLLNGYQKEINLDNPIGYQGNVANAFGKLI 471
Query: 377 RKLW------------SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
KL+ S + +P FK + FSGY Q DSQE LAF+LDGLHE
Sbjct: 472 HKLFEERIIDNESEKSSFSINSFSPTNFKSTVGYCNSMFSGYLQQDSQEFLAFILDGLHE 531
Query: 425 DLNRVKQKPYIE---MKDSGGRPDEEV----ANECWKNHKARNDSLIVDVFQGQYKSTLV 477
DLNR+ +KP++E + ++ D +V A++ W+ H RNDS++ D+F G YKSTL
Sbjct: 532 DLNRILKKPFVEKPSLPENSNYKDYKVIKKLADDTWEAHLKRNDSIVTDLFVGMYKSTLQ 591
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C VS+TFDP+ LTLPLP + +F +N P V L K DL
Sbjct: 592 CPDCHNVSVTFDPYNDLTLPLPVETIWNKVIKIFPSNSP--PCSLEVELEKTSTYNDLKE 649
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVAYRFDRKQG 591
+S + + L E++++ + +E P L I D + ++ Y ++
Sbjct: 650 YISRNTGIAASD-LFGFEIFSNTFYSNYEAPGSNGQFLPLQELIADSDDVIFYEIPDREN 708
Query: 592 GKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSG 634
I + I+N +K +LFG P L E S
Sbjct: 709 N-IVIPILNMKIDKGF------RSPRLFGVPFFITLTNEEASN 744
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
+++ I L CL F E LG D WYCP CK+HRQATK+++LW PD+L+ HLKRF
Sbjct: 1066 KEKTILLDDCLRLFSKPEILGLQDSWYCPTCKDHRQATKQIELWNTPDILLIHLKRFENQ 1125
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAK 874
R +K+D VNFPI +LDL+ ++ D E S +YDL A+ NHYGGLGGGHYTAY K
Sbjct: 1126 RSFSDKIDAVVNFPITDLDLTPHIVCTDQEKSNIYDLIAVDNHYGGLGGGHYTAYVK 1182
>gi|432845632|ref|XP_004065833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like [Oryzias
latipes]
Length = 1184
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 278/633 (43%), Gaps = 124/633 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF----------LGDYSDEINTENPLGMHGE 367
G+ GL+N GNTCFMN+ +QCL +T LA+Y G + E E P + GE
Sbjct: 120 GVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICQGRVNGEERGEEPQAVRGE 179
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ FK +A+++ QF G +QHD+ E L +LLD +HED N
Sbjct: 180 VTEQLAALIRALWTLEYTPQLSVDFKSIVAKYSSQFRGNSQHDALEFLLWLLDRVHEDAN 239
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
D+G N + ++R+ S + + FQ QY+S+L CP C K S T
Sbjct: 240 --------TNPDNGNN-----RNPSTQQPRSRH-SFVQEHFQAQYRSSLTCPHCLKQSNT 285
Query: 488 FDPFMYLTLPLPSTVTRTMTVT-VFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
FDPF+ ++LP+P TR + VT VF A G ++ G L ++ST +
Sbjct: 286 FDPFLCISLPIPLRQTRALCVTLVFSAKGQ--------RYVRVGLAVPLFGSISTLRTMT 337
Query: 547 IDEG------LLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF-------------- 586
EG ++LAE+Y+ R F + EL + I D + + A++
Sbjct: 338 AAEGNIAPDQVILAELYSTGFQRSFSDEDEL-TMIADSDVVYAFQAPPVSNRGGLTPHSD 396
Query: 587 ----DRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSG 634
Q G++ E +N S+S + G FG P + +E+ +S
Sbjct: 397 FIGQKLPQSGRLSSEYLN---HSSSSKVILLMCNTVGSGQHAARFGPPFL-MVEDRTVS- 451
Query: 635 ADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSREL 694
D +LS L Y A A + G L ++ S++ + + LC +
Sbjct: 452 --WDQLTQSILSNL--YYLMANASQSQTAGVLFKIRVVGSSAAYSYLSPQDSRPLCHPAV 507
Query: 695 SFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHE----LYDPSYIKDLPVVHK 750
L L C P H+K++++W E ++D V
Sbjct: 508 DRALKL-------CGPGGP-------LHVKLVIEWERSTKEHLFGSIQEEVVQDAESVRN 553
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +Q + +L C + EE L PDD W CP CK+ +Q K++LW LPD+L+
Sbjct: 554 Q--QQQHLQQHSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMNLWTLPDILIL 611
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD------------------------ 846
HLKRF +NKL T V FP+ LD++ ++ +
Sbjct: 612 HLKRFRQVGERRNKLSTLVGFPLTGLDMAPHVVKRSQSMKNLHQGSSQTNRRPSSGQHQR 671
Query: 847 -----GESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y+YDL+A+ NH+GG+ GGHYTAY +
Sbjct: 672 SDIMLARDYLYDLYAVCNHHGGMHGGHYTAYCR 704
>gi|405118112|gb|AFR92887.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1246
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 132/196 (67%), Gaps = 7/196 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G+ GL+NLGNTC+MNS +QCL T + +FL G ++ IN ENPLG GELA A+ +LL
Sbjct: 883 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPLGTKGELAKAWAELL 942
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK-PYI 435
R LWS ++P F+ ++ FAPQF G +QHDSQE L+F+LDGLHEDLNR+K+K P +
Sbjct: 943 RVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPPPV 1002
Query: 436 EMKDSG-----GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
EM P E + W ++ RNDSLIVD+FQGQY++ L C C K S T+D
Sbjct: 1003 EMTPEREAMLESAPPEVASEREWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDA 1062
Query: 491 FMYLTLPLPSTVTRTM 506
FMY++LP+PS T+ +
Sbjct: 1063 FMYMSLPVPSGKTKVV 1078
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 22/128 (17%)
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL-KNKLDT 827
+D F+ E + ++ WYCP+CK +R+A+K L + LP VL+ LKRF+ L +K +T
Sbjct: 1083 IDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFWDKSET 1142
Query: 828 FVNFPILNLDLSKYMKSKDGES---------------------YVYDLFAISNHYGGLGG 866
V FPI LDL++Y+ G S + YDL+ +SNH G L
Sbjct: 1143 PVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHMGTLSS 1202
Query: 867 GHYTAYAK 874
GHYTA+ K
Sbjct: 1203 GHYTAFVK 1210
>gi|123502469|ref|XP_001328304.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121911245|gb|EAY16081.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 795
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 225/486 (46%), Gaps = 69/486 (14%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
P E+Q ++ K +LK G+ +L+S RW+ W++ + ID P +
Sbjct: 3 PTNEKQKLEIAKALEQNELKVGDKGYLLSFRWFSKWKKVTGFENEEID------PEI--- 53
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
+ G IDN+ ++ D +++ + + DY+ +P+ V++ F WY GGP
Sbjct: 54 ------KLGEIDNNHLL---------DKDQIKITIMDNYDYICIPEAVYKLFFDWYGGGP 98
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQ 201
+ +MI+ N + LK+I S + + I ++ R + ++ C+ GI
Sbjct: 99 EITVEMINSPATNTPVPLIIKWHLKIIFS--DQEFEILTNRYEYVRDIKKRACEHFGINS 156
Query: 202 EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPI 261
+ + DY+NK + D D L+ + Q+ILL+++ DN + S G I
Sbjct: 157 DATYLVDYWNKNVLSIFRD--DFYLEQCYIINTQEILLKLKTDNR-NTSSRGK----FTI 209
Query: 262 EPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAG 321
+ SS++ P ++ T G+ G
Sbjct: 210 SRTNSSMSSGITPIIATPQTLGH-----------------------------------VG 234
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKLW 380
L N+GNTC++NS+LQ L HT L QYF G + E+N +NP G G +A F L+ +W
Sbjct: 235 LDNIGNTCYINSSLQVLAHTELLFQYFESGLWRRELNEQNPKGTGGIVAHQFAQLINDIW 294
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
+ + ++P K + +F PQF+ Q DSQE L LL L DLNRV ++ YIE
Sbjct: 295 TKKQKVISPYDLKNSIGKFHPQFNNSQQQDSQEFLLCLLSDLSGDLNRVTKRCYIEGVVG 354
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
G D E A+ WK HK DS IVD+F GQ ++ + C C + FD + L++P+
Sbjct: 355 DGTNDNETADLAWKRHKLLFDSAIVDIFHGQLRTEVKCDECGNKKVVFDAYSSLSIPISK 414
Query: 501 TVTRTM 506
T T+
Sbjct: 415 TSLETI 420
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM- 842
W+CP CK+ A +W + DVL+ L+RF+ KL+ V+FP +D+S Y+
Sbjct: 659 WFCPHCKKFVNAVVNATIWSVADVLIMQLQRFTQENGEYKKLNVVVDFPT-EIDMSPYLV 717
Query: 843 ---KSKDGESYVYDLFAIS-NHYGGLGGGHYTA 871
K K+ + +Y I+ NH G L GGHYTA
Sbjct: 718 GPQKDKEQKYRLYAYINININHIGTLNGGHYTA 750
>gi|37747599|gb|AAH58994.1| Usp32 protein, partial [Mus musculus]
Length = 846
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 3/221 (1%)
Query: 345 AQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQF 403
QYF+ G + E+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F
Sbjct: 1 TQYFISGRHLYELNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRF 60
Query: 404 SGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSL 463
+G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S+
Sbjct: 61 NGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSI 120
Query: 464 IVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFT 523
+VD+F GQ +S + C C +S+ FDPF +L+LPLP + +TV +G+ P+ +
Sbjct: 121 VVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPIRYG 179
Query: 524 VTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRF 564
+ L L LS C LK E +L AEV++ I F
Sbjct: 180 LRLNMDEKYTGLKKQLSDLCGLK-SEQILFAEVHSSNIKNF 219
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
+ +DW L + + + H++ ++ + E I+L SCL AF +EE LG ++M+
Sbjct: 437 IAVDWDPTALHLRYQTSQERVVEEHESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMY 496
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYM 842
YC +CK H ATKKLDLW LP +L+ HLKRF + R++K++ V FP + D S ++
Sbjct: 497 YCSKCKTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFL 554
Query: 843 KSKD 846
+D
Sbjct: 555 VPRD 558
>gi|395836398|ref|XP_003791143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Otolemur
garnettii]
Length = 1135
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 172/619 (27%), Positives = 272/619 (43%), Gaps = 105/619 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVPE 211
Query: 437 MKDSGGRPDEEVANECWKNHKARN------DSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
P+ +E NH + + S + FQ QY+S+L CP C K S TFDP
Sbjct: 212 KLS----PEASKTSE---NHVSPSTPLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDP 264
Query: 491 FMYLTLPLPSTVTRTMTVT-VFYANGS-----GLPMPFTVTLMKHGCCKDLILALSTACC 544
F+ ++LP+P TR ++VT VF + G GL +P T+ L ++
Sbjct: 265 FLCVSLPIPLRQTRFLSVTLVFPSKGQQFLRVGLAVPILSTVAA------LRKMVAEEGG 318
Query: 545 LKIDEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAYRFDRKQGGKI------KLE 597
+ DE ++LAE+Y R FF+ E +++I + +++ A++ G I L
Sbjct: 319 VPADE-VILAELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQAPPSPGQGIFSAHASALP 375
Query: 598 IVNRWQEKSASDYL------------------KGSERKLFGAPLVTYLEEEHLSGADIDI 639
+ R + G + FG P + E+ +S A +
Sbjct: 376 VSPRLAACEGQRFPLSLHTENKVLILFCNLVGSGQQASRFGPPFLIR-EDRAISWAQLQQ 434
Query: 640 AVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLS 699
++ + L ++ +S ++ G F V+ S+ + L SR L
Sbjct: 435 SILSKVRYLMKSEASVQSLGSL---FSIRVV-------GLSLACSYLSPKDSRPLCHW-- 482
Query: 700 LTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTR 759
D + S +P H+K+ ++W E S ++ + + ++
Sbjct: 483 AVDRALHSRRPGGP-------PHVKLAVEWDSSAKERLFGSLQEERARDADSVWRQQQAH 535
Query: 760 QE-AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
Q+ + +L C + EE L DD W CP CK +Q KL LW LPD+L+ HLKRF
Sbjct: 536 QQHSCTLDECFQFYTKEEQLAQDDAWKCPHCKVLQQGMVKLSLWTLPDILIIHLKRFCQV 595
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGES-----------------------YVYDLF 855
+NKL T V FP+ L++S ++ + ++YDL+
Sbjct: 596 GERRNKLSTLVKFPLSGLNMSPHVAQRSTSPNPGPGPWSPWKQPACLPTAYPLDFLYDLY 655
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+ NH+G L GGHYTAY +
Sbjct: 656 AVCNHHGSLQGGHYTAYCR 674
>gi|340503880|gb|EGR30389.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 1095
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/282 (41%), Positives = 154/282 (54%), Gaps = 23/282 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAFGDLL 376
GL GL NLGNTC+MNSALQCL +T L YFL Y EIN +NPLG G+L
Sbjct: 440 GLCGLNNLGNTCYMNSALQCLSNTEPLTHYFLNKYYKKEINKDNPLGTKGKL-------- 491
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
KLW P A K +++ FSGY QHDSQE L+F+LDGLHEDLNRVK K Y E
Sbjct: 492 -KLWIGTDRVFYPSAIKNAVSQVQNIFSGYQQHDSQEFLSFVLDGLHEDLNRVKNKSYTE 550
Query: 437 MKDSGGRP-DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
DS G D ++ + W NH RN SLIVD+ QGQ+KS ++CP CSK SITFDPF+ T
Sbjct: 551 KIDSNGEEFDNIISKKSWINHLKRNQSLIVDLMQGQFKSKVICPDCSKQSITFDPFLTCT 610
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LP+P + + N + ++ K L A K+++ LL
Sbjct: 611 LPIPHQQIKVLDFYYIPVNNRIICTSDQFNFYENSTQKVQELKNYFARKYKVNQNRLLLC 670
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIV-AYRFDRKQGGKIKL 596
+ +Q ++ IKD+E + YR +++Q K+ L
Sbjct: 671 MNENQ-----------LAVIKDEEFLKDVYRKNKQQRNKVIL 701
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 44/159 (27%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
++E IS++ C + F E L ++ WYC CK H++ATK++ ++ +P++L+ HLKRF +
Sbjct: 902 QKENISIYECFNQFQQSEKLEENNEWYCSDCKAHKRATKQMTIYRVPNILIIHLKRFKMT 961
Query: 819 RYLKN-KLDTFVNFPILNLDLSKYMKSKDGESYVY------------------------- 852
+ N KL V FP+ LD++ Y+ K+ SY Y
Sbjct: 962 GGIWNQKLTKLVTFPVEGLDITDYVVKKELPSYYYENHTDLNDDEEIKNLYVKPDFQENL 1021
Query: 853 ------------------DLFAISNHYGGLGGGHYTAYA 873
DL+A NH+GGLGGGHYTA+A
Sbjct: 1022 FQKGQIDIEGEDNSRLLFDLYAAVNHFGGLGGGHYTAFA 1060
>gi|293336267|ref|NP_001170334.1| uncharacterized protein LOC100384307 [Zea mays]
gi|224035167|gb|ACN36659.1| unknown [Zea mays]
Length = 423
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 196/363 (53%), Gaps = 43/363 (11%)
Query: 506 MTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFF 565
MTVTVF +GS P + V++ K G DL+ ALS C L DE LL+ EVYN+ I R+
Sbjct: 1 MTVTVFSTDGSREPCSYDVSVPKFGTLSDLVQALSIVCLLGDDEILLVTEVYNNCIIRYL 60
Query: 566 ENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVT 625
E P++ +S ++D + + AYR ++ + ++ + +SD + + F APL+
Sbjct: 61 EEPSDSVSLLRDGDKLAAYRLPKRHEKSPLVVFTHQHFVQHSSDGNLTPQMREFEAPLLA 120
Query: 626 YLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAE 685
L EE +SG + KLLSP + + ++ + E+ + +D S+S + + + ++
Sbjct: 121 ALPEE-ISGLSLQDIYLKLLSPFQLSNGASSLNDCMESN--SDSVDTPSDSGSINFQNSQ 177
Query: 686 LED-----LCSR-----------------------ELSFQLSLTDERISSCKPIQKDSI- 716
LED CS + F+ L ER + QK I
Sbjct: 178 LEDGPESNHCSASECEVTKGPDDLYDGVSGSNKEAHMDFEFYLKSERGEGQQ--QKIEIN 235
Query: 717 -------LKPGKHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCL 769
P + + V + W + Y S + +LP +HK K T +++++L CL
Sbjct: 236 ELHLLLETAPSR-LHVNVHWLQNASRKYATSMLNNLPEIHKLELIPKGT-EDSVALHGCL 293
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+AFL EEPLGP+DMWYCP+CK+H+QA KKLDLW LP+VLV HLKRFSY+++ +NKL+TFV
Sbjct: 294 EAFLKEEPLGPEDMWYCPRCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFV 353
Query: 830 NFP 832
+FP
Sbjct: 354 DFP 356
>gi|440895595|gb|ELR47745.1| Ubiquitin carboxyl-terminal hydrolase 43, partial [Bos grunniens
mutus]
Length = 1047
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 175/612 (28%), Positives = 272/612 (44%), Gaps = 90/612 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ L Y E E+ L+
Sbjct: 7 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALRRYRAEPG-------RAEVTEQLAALV 59
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G QHD+ E L +LLD +HEDL + P +
Sbjct: 60 RALWTREYTPQLSAEFKNAVSKYGAQFQGNAQHDALEFLLWLLDRVHEDLEGSSRGPSSD 119
Query: 437 MKDSGGRPDEEVANECWKNHKA---RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
+P+ +E + A S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 120 KL----QPEARKTSENLLSPSAPLSMGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 175
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPF--TVTLMKHGCC-------KDLILA 538
++LP+P TR ++VT+ + + S GL +P TV ++ +++IL
Sbjct: 176 VSLPIPLRQTRFLSVTLVFPSKSQRFLRIGLAVPILSTVAALRKMVAEEGGVSPEEVILV 235
Query: 539 LSTACCLK---IDEGLL--LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
L+ DE L +AE N F+ +P + + S + +V+ R ++G +
Sbjct: 236 ELYPSGLQRSFFDEEDLNTIAEGDNVYAFQAPPSPGQEMLSARPSGLLVSPRLAAREGQR 295
Query: 594 IKLEIVNRWQEKSASDYLKGSERKL--FGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
+ L + N L GS ++ FG P + E+ +S + + LS +R
Sbjct: 296 LSLPVHNETSVLILFCNLVGSGQQASRFGPPFLVR-EDRAISWIQLQQCI---LSKVRYL 351
Query: 652 YSSAKAHGGKENGFLPEV-IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP 710
S EV I L + S+ L CS LS D R
Sbjct: 352 MKS-------------EVPIQNLGSLF--SIRVVGLSLACS-----YLSPQDSRPLCHWA 391
Query: 711 IQKD-SILKPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
+ + + +PG HIK+ ++W D E L+ + + + +Q + +L
Sbjct: 392 VDRALHLRRPGGPPHIKLAVEWDVDTKERLFGSPQEERVQDADSVRRQQQAHQQHSCTLD 451
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF +NKL
Sbjct: 452 ECFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLS 511
Query: 827 TFVNFPILNLDLSKYMKSKDGES------------------------YVYDLFAISNHYG 862
T V FP+ L+++ ++ + ++YDL+A+ NH+G
Sbjct: 512 TLVKFPLAGLNMAPHVAQRSTSPKAMPGAWPPSWKQPACLPTSYPPDFLYDLYAVCNHHG 571
Query: 863 GLGGGHYTAYAK 874
L GGHYTAY +
Sbjct: 572 SLQGGHYTAYCR 583
>gi|123314452|ref|NP_776115.2| ubiquitin carboxyl-terminal hydrolase 43 [Mus musculus]
gi|115311887|sp|Q8BUM9.2|UBP43_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 43; AltName:
Full=Deubiquitinating enzyme 43; AltName: Full=Ubiquitin
thioesterase 43; AltName:
Full=Ubiquitin-specific-processing protease 43
Length = 1132
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 177/658 (26%), Positives = 285/658 (43%), Gaps = 115/658 (17%)
Query: 286 FNQYPG---SSFGSTFMDMDDGYDSYNTAKKGEKG-GLAGLQNLGNTCFMNSALQCLVHT 341
F PG +S GS D G ++ G + G GL+N GNTCFMN+ +QCL +T
Sbjct: 63 FACAPGPAPASAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLSNT 122
Query: 342 PDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
LA++ LG Y E+ L+R LW+ FK ++++
Sbjct: 123 DLLAEFLALGRYRAAPG-------RAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYG 175
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
QF G +QHD+ E L +LLD +HEDL E P+ +E + A
Sbjct: 176 SQFQGNSQHDALEFLLWLLDRVHEDLEGSAHGLVSEQLP----PEVSKISEDLRPSAAPT 231
Query: 461 D---SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
S + FQ QY+S+L CP C K S TFDPF+ ++LP+P TR ++VT+ + + S
Sbjct: 232 SLGPSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKS- 290
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEG------LLLAEVYNHQIFR-FFENPAE 570
++ G ++ ++ + +EG ++L E+Y + R FF+ E
Sbjct: 291 ------QRFLRVGLAVPILSTVAALRKMVAEEGGVPAEEVILVELYPNGFQRSFFDE--E 342
Query: 571 LISSIKDDEHIVAYRFDRKQG-GKIK-----LEIVNRWQEKSASDYL------------- 611
+++I + +++ A++ G G + L + R + + +
Sbjct: 343 DLNTIAEGDNVYAFQVPPSPGLGTLSAHPSGLSVSPRLPVRDSQRFSGPLHSENRVVFLF 402
Query: 612 -----KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL 666
G + FG P + E+ +S A + + + L R+ SA+ G F
Sbjct: 403 CNLVGSGQQASRFGPPFLIR-EDRTISWAQLQQCILSKVRCLMRSEVSAQDLG---TLF- 457
Query: 667 PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKD-SILKPG--KHI 723
S+ L CS LS D R + + + +PG H+
Sbjct: 458 -------------SIRVVGLSLACS-----YLSPKDNRPLCHWAVDRALHLRRPGGPPHV 499
Query: 724 KVLLDWTDDVHELYDPSY----IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLG 779
K+ ++W V E S ++D V + + +Q + +L C ++ EE L
Sbjct: 500 KLAVEWDSSVTERLFGSLQEERVQDADSVWR---QQQAHQQPSCTLDECFQSYTKEEQLA 556
Query: 780 PDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS 839
DD W CP C+ +Q KL LW LPD+L+ HLKRF +NKL T V FP+ L+++
Sbjct: 557 QDDAWKCPHCQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLSTLVKFPLSGLNMA 616
Query: 840 KYMKSKDGES-----------------------YVYDLFAISNHYGGLGGGHYTAYAK 874
++ + S ++YDL+A+ NH+G L GGHYTAY +
Sbjct: 617 PHVARRSTNSKAGPGPWSSWKQPICLPTTYPLDFLYDLYAVCNHHGSLQGGHYTAYCR 674
>gi|402898759|ref|XP_003912384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Papio anubis]
Length = 1123
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 269/616 (43%), Gaps = 99/616 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P +E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVLE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ +S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEANKTSENCLSPSAQLPLGESFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPF--TVTLMKHGCCKDLILALSTACCL 545
++LP+P TR ++VT+ + + S GL +P TV +++ ++ + +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAVLRRMVAEEGGVPADEVILV 327
Query: 546 KI----------DEGLL--LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
++ DE L +AE N F+ +P++ S V+ R ++G +
Sbjct: 328 ELYPSGFQRSFFDEEDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLALSVSPRLAAREGQR 387
Query: 594 IKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLL 645
L + S S L G + FG P + E+ +S A + ++ L
Sbjct: 388 FSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQLQQSI---L 437
Query: 646 SPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERI 705
S +R S + F S+ L CS LS D R
Sbjct: 438 SKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS-----YLSPKDSRP 478
Query: 706 SSCKPIQKD-SILKPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQE 761
+ + + +PG H+K+ ++W V E L+ + + +Q
Sbjct: 479 LCHWAVDRALHLRRPGGPPHVKLAVEWDSSVKERLFGNLQEERAQDADSVWQQQQAHQQH 538
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
+ +L C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF
Sbjct: 539 SCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFCQVGER 598
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGES-----------------------YVYDLFAIS 858
+NKL T V FP+ L+++ ++ + ++YDL+A+
Sbjct: 599 RNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKPPGCLPTSCPLDFLYDLYAVC 658
Query: 859 NHYGGLGGGHYTAYAK 874
NH+G L GGHYTAY +
Sbjct: 659 NHHGNLQGGHYTAYCR 674
>gi|340506944|gb|EGR32981.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 778
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 125/205 (60%), Gaps = 1/205 (0%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K+ G+ GL NLGNTCFMNSALQCL +T L Q+F Y EIN NPLG G+LA
Sbjct: 141 KQNAAKGICGLVNLGNTCFMNSALQCLSNTKILTQFFFNKTYKQEINHTNPLGTQGKLAK 200
Query: 371 AFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
+ LL+ LW P K ++ FSG QHDSQE L+F+LDGLHEDLNRVK
Sbjct: 201 KYSQLLKALWIKKSKIFNPIGIKLVISDLQYMFSGNQQHDSQEFLSFILDGLHEDLNRVK 260
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
K +S GR D V+ E W NH RN S+IVD+ QGQ+KS + CP C S+TFDP
Sbjct: 261 NKVNTYPINSDGRNDNIVSFEFWLNHIKRNQSIIVDLMQGQFKSKVTCPQCMYESVTFDP 320
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANG 515
F+ +LP+P + +++ + +AN
Sbjct: 321 FLSCSLPIPYKNIKFISIHILFANN 345
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 31/150 (20%)
Query: 756 KKTRQEA-ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+K +QE ++++ CL F E L ++ WYC C++ ++ATK++ ++ PD+L+FHLKR
Sbjct: 593 EKIKQETEVNIYDCLKLFEQPEKLQKNNEWYCHMCQKFQKATKQMTIYRAPDILIFHLKR 652
Query: 815 FSYSR-YLKNKLDTFVNFPILNLDLSKYMKSK---------------------------- 845
F S +K+K+ ++FP+ NL+++ Y+ K
Sbjct: 653 FKTSAGTIKSKITKLIDFPLKNLNMTPYVIEKESPYVNYQNQQSQEQNLFQKSSFTLYDQ 712
Query: 846 -DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
D E+ +YDL+A++NHYG LG GHYTAYAK
Sbjct: 713 YDKENLIYDLYAVTNHYGSLGFGHYTAYAK 742
>gi|157120281|ref|XP_001653586.1| ubiquitin specific protease [Aedes aegypti]
gi|108883099|gb|EAT47324.1| AAEL001540-PA [Aedes aegypti]
Length = 904
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 268/605 (44%), Gaps = 97/605 (16%)
Query: 331 MNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALAFGDLLRKLWSSGR 384
MN+ LQCL HT LA+YF+ D Y ++ N + G GEL +L+ LW+
Sbjct: 1 MNAVLQCLSHTDILAEYFVLDQYKADLKRRNKINAKKFGTKGELTEQLALVLKSLWTCKD 60
Query: 385 AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP 444
A +FK + R+ QF QHD+QE L +LLD +HEDLN ++ Y +K++ GR
Sbjct: 61 APEYSSSFKAVVDRYGSQFRSSTQHDAQEFLFWLLDKVHEDLNTATKRKYKAIKNNYGRS 120
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
DE +A E NH N S + VFQ Q++S+L CP C K S TFDPF +++ LP +
Sbjct: 121 DEVIAAETLANHIRCNSSFVQAVFQAQFRSSLTCPRCHKQSNTFDPFHCISVQLPQLTLQ 180
Query: 505 TMTVTVFYAN--------GSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
+ V V YA+ G G+P V +++ D +A+ + ++LAEV
Sbjct: 181 PVFVRVIYASQQPKQVQLGLGVPHGSPVMVLREQLHADTGIAV---------DRMILAEV 231
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG--KIKLEIVNRWQEKSASDYLKGS 614
R + + + L+SSI DD + G +I L I N ++ +
Sbjct: 232 CEGGFSRVYCD-SHLVSSIGDDGSVYCIESPPVAEGMTQIVLCITNGRRD------VGSG 284
Query: 615 ERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELS 674
E + FG P + + +S ++ + K +S + + S A + + S
Sbjct: 285 EVRRFGTPFCIVVNRD-VSYVELQKLLLKEMSSILK--SEVFAFSTPMQEMFKMRLQDPS 341
Query: 675 NSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPGKHIKVLLDWTDDVH 734
+ +E+ L + + LS+ + D+ P H+K+L++WT+
Sbjct: 342 CDADTYLESNVEHPLFTEMIDLALSV----------LPTDA--GPA-HVKLLIEWTNPER 388
Query: 735 ELYDPSYIKDLPVVHKTGFTVKKT--RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEH 792
D + D V H++ +K+ +++L CL+ + E L +D W CP C+++
Sbjct: 389 FFSD---MTDPFVEHESVSQMKEKIPGSSSLTLEQCLEHYTKAETLSAEDAWRCPHCQKY 445
Query: 793 RQATKKLDLWMLPDVLVFHLKRFSYSRYL---KNKLDTFVNFPILNLDLSKYMKSKDGES 849
K L LW LPD++V H KRF + KL T V FP+ D+S ++ ++D +
Sbjct: 446 LPVVKTLGLWSLPDIMVIHFKRFRQQQLRGPQAAKLTTLVKFPLTGFDMSPHL-ARDSNA 504
Query: 850 YV---------------------------------------YDLFAISNHYG-GLGGGHY 869
YDL+A+ H G L GHY
Sbjct: 505 EASSVSNGTEDNWSPWRKTINRYTKHSSNHYNQNSLPMDNRYDLYAVCYHQGDTLETGHY 564
Query: 870 TAYAK 874
TA K
Sbjct: 565 TAACK 569
>gi|91088095|ref|XP_969130.1| PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 43
[Tribolium castaneum]
Length = 859
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 172/609 (28%), Positives = 278/609 (45%), Gaps = 87/609 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCF+N+ LQC+ HT LA+YF+ D Y +++ N L G GE+
Sbjct: 90 GVTGLKNHGNTCFINAVLQCISHTDVLAEYFVLDRYKIDLSRRNKLNSKKFGTKGEITEQ 149
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ LW+ + +FK + R Q+ G QHD+ E L +LLD +HEDLN +
Sbjct: 150 LALLLKALWACQYSPELSTSFKQVVERHGSQYKGNQQHDALEFLQWLLDKVHEDLNTASK 209
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K SG R DE +A E +N+K N+S I VFQ QY+S+L C C S TFDPF
Sbjct: 210 KKYKLIKTSG-RSDEVIAAETLENYKRCNNSFIQGVFQAQYRSSLSCSRCRTQSNTFDPF 268
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
+++ LP +++ VTV Y + + ++L +L L + ++ +
Sbjct: 269 QCISVQLPQFSKQSIYVTVLYTSQQPRQVQIGLSLPSGATVSELRDILESDTSIE-RANM 327
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYL 611
L+ E+ R F + + ++ I + + I I++ + +E + S Y+
Sbjct: 328 LITEIGETGFLRTFTD-TQSVNIISEIDPIYC----------IEVAQLKDLEEDTTSAYI 376
Query: 612 ---------KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR--TYSSAKAHGG 660
+G K FG+P + E S D+ + K ++P+ +SA+ G
Sbjct: 377 LLCWINVVQEGDGFKRFGSPYTMQVSRE-TSYEDLQKLLLKEMAPILHDDILTSAQPKG- 434
Query: 661 KENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPG 720
F + D N + E C E + L E + + + P
Sbjct: 435 ---VFKIRISDPACNDN---------EPPCYLEPELEHPLFMEDVDQALALCSEEGGPP- 481
Query: 721 KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA------ISLFSCLDAFLT 774
H+K+++++T + I D + + +VK+ + +A ++L CL +
Sbjct: 482 -HVKLVIEFTQSAKN----AIIADDTDIIEEHSSVKQLKAQALQGGAPLTLEECLRDYTE 536
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL---KNKLDTFVNF 831
E L D W CP C++++ K LD+W LPD+LV H KRF KL V+F
Sbjct: 537 AETLT--DAWRCPHCQQYQPVVKTLDMWSLPDILVVHFKRFRQQTLRGCSSAKLINMVDF 594
Query: 832 PILNLDLSKYMKSK-------------------------DGESYVYDLFAISNHYGG-LG 865
P+ NLD+S ++ +K + +YDL+ I H+G +
Sbjct: 595 PVYNLDMSPHLANKGQNISEDQMIMTNGWSPFKRTRKQSNANDNMYDLYGICYHHGSDIE 654
Query: 866 GGHYTAYAK 874
GHYTA K
Sbjct: 655 TGHYTAACK 663
>gi|348561147|ref|XP_003466374.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43-like, partial [Cavia porcellus]
Length = 1043
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 170/623 (27%), Positives = 270/623 (43%), Gaps = 113/623 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+ GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 19 GAQGLKXHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 71
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL-----NRVKQ 431
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL V +
Sbjct: 72 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGLVSE 131
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K E P A S + FQ QY+S+L CP C K S TFDPF
Sbjct: 132 KLLPEASKIPENPQSSSA------QLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPF 185
Query: 492 MYLTLPLPSTVTRTMTVTV--------FYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
+ ++LP+P TR ++VT+ F G +P+ TV ++ ++ +
Sbjct: 186 LCVSLPIPLRQTRFLSVTLAFPCKSQRFLRVGLAVPILSTVAALRKMVAEEGGVPA---- 241
Query: 544 CLKIDEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY------------------ 584
E ++L E+Y + R FF+ E +++I D +++ A+
Sbjct: 242 -----EEVILVELYPNGFQRSFFDE--EDLNTIADGDNVYAFQVPLCPSQGTLSARPLGL 294
Query: 585 ----RFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKL--FGAPLVTYLEEEHLSGADID 638
R ++G + L + + + L GS ++ FG P + E+ +S A ++
Sbjct: 295 LLSPRLAAREGQRFPLPLPSENKVLILFCNLVGSGQQASRFGPPFLIR-EDRSISWAQLE 353
Query: 639 IAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQL 698
+ + L +T + A+ G S+ L CS L
Sbjct: 354 QCILSKVRYLMKTEAPAQNLGSL-----------------FSIRVVGLSLACS-----YL 391
Query: 699 SLTDERISSCKPIQKD-SILKPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFT 754
S D R + + + +PG H+K+ ++W E L+ + +P
Sbjct: 392 SPQDSRPLCHWAVDRALHLRRPGGPPHVKLAVEWDCTTKECLFGSLQEERVPDADSVWRQ 451
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+ +Q + +L C + EE L DD W CP CK +Q KL LW LPD+L+ HLKR
Sbjct: 452 QQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCKVLQQGVVKLSLWTLPDILIIHLKR 511
Query: 815 FSYSRYLKNKLDTFVNFPILNLDLSKYM--KSKDGES---------------------YV 851
F +NKL T + FP+ LD++ ++ +S G+ ++
Sbjct: 512 FCQVGERRNKLSTLIKFPLSGLDMAPHVAQRSTSGKPLPGPWPSWKQPASLPTTYPLDFL 571
Query: 852 YDLFAISNHYGGLGGGHYTAYAK 874
YDL+A+ NH+G L GGHYTAY +
Sbjct: 572 YDLYAVCNHHGSLQGGHYTAYCR 594
>gi|224073732|ref|XP_002335895.1| predicted protein [Populus trichocarpa]
gi|222836241|gb|EEE74662.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
Query: 725 VLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMW 784
V +DW+ ++ E YD Y+++LP V K G KK R E +SL++CL+ FL EEPL P+DMW
Sbjct: 94 VYVDWSQELLEKYDIHYLENLPEVFKYGPVNKKARTEPLSLYTCLEGFLREEPLVPEDMW 153
Query: 785 YCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS 844
YCP+CKE RQA+KKLDLW LP+VLV HLKRFSYSR +K+KL+TFVNFPI + DL+ Y+ +
Sbjct: 154 YCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIRDFDLTNYIAN 213
Query: 845 KDG-ESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
K+ + +Y+L+A++NHYGG+G GHYTA+ KV+
Sbjct: 214 KNNTQRQLYELYALTNHYGGMGSGHYTAHIKVS 246
>gi|403275388|ref|XP_003929431.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Saimiri
boliviensis boliviensis]
Length = 1147
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 170/625 (27%), Positives = 272/625 (43%), Gaps = 117/625 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 123 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 175
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + E
Sbjct: 176 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGSVSE 235
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 236 KLP----PEANKTSENCLSPSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 291
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ + +
Sbjct: 292 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGIPV 345
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY---------------------- 584
DE ++L E+Y R FF+ E +++I + +++ A+
Sbjct: 346 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSLSP 402
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGAD 636
R ++G + L + S S L G + FG P + E+ +S A
Sbjct: 403 RLAAREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAISWAQ 455
Query: 637 IDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSF 696
+ ++ LS +R + + F S+ L CS
Sbjct: 456 LQQSI---LSKVRHLMKNEAPVQNLGSLF--------------SIRVVGLSVACS----- 493
Query: 697 QLSLTDERISSCKPIQKDSILK-PG--KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGF 753
LS D R + + L+ PG H+K+ ++W V E + ++ + +
Sbjct: 494 YLSPKDSRPLCHWAVDRALHLRRPGGPPHVKLAVEWDGSVKERLFGNLQEERAQDADSVW 553
Query: 754 TVKKT-RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHL 812
++ RQ + +L C + EE L DD W CP C+ +Q KL LW LPD+L+ HL
Sbjct: 554 QQQQAHRQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHL 613
Query: 813 KRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES----------------------- 849
KRF +NKL T V FP+ L+++ ++ +
Sbjct: 614 KRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPGCLPTSYPLD 673
Query: 850 YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 674 FLYDLYAVCNHHGNLQGGHYTAYCR 698
>gi|270012100|gb|EFA08548.1| hypothetical protein TcasGA2_TC006203 [Tribolium castaneum]
Length = 933
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 172/609 (28%), Positives = 278/609 (45%), Gaps = 87/609 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL-----GMHGELALA 371
G+ GL+N GNTCF+N+ LQC+ HT LA+YF+ D Y +++ N L G GE+
Sbjct: 111 GVTGLKNHGNTCFINAVLQCISHTDVLAEYFVLDRYKIDLSRRNKLNSKKFGTKGEITEQ 170
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
LL+ LW+ + +FK + R Q+ G QHD+ E L +LLD +HEDLN +
Sbjct: 171 LALLLKALWACQYSPELSTSFKQVVERHGSQYKGNQQHDALEFLQWLLDKVHEDLNTASK 230
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y +K SG R DE +A E +N+K N+S I VFQ QY+S+L C C S TFDPF
Sbjct: 231 KKYKLIKTSG-RSDEVIAAETLENYKRCNNSFIQGVFQAQYRSSLSCSRCRTQSNTFDPF 289
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
+++ LP +++ VTV Y + + ++L +L L + ++ +
Sbjct: 290 QCISVQLPQFSKQSIYVTVLYTSQQPRQVQIGLSLPSGATVSELRDILESDTSIE-RANM 348
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYL 611
L+ E+ R F + + ++ I + + I I++ + +E + S Y+
Sbjct: 349 LITEIGETGFLRTFTD-TQSVNIISEIDPIYC----------IEVAQLKDLEEDTTSAYI 397
Query: 612 ---------KGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRR--TYSSAKAHGG 660
+G K FG+P + E S D+ + K ++P+ +SA+ G
Sbjct: 398 LLCWINVVQEGDGFKRFGSPYTMQVSRE-TSYEDLQKLLLKEMAPILHDDILTSAQPKG- 455
Query: 661 KENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPIQKDSILKPG 720
F + D N + E C E + L E + + + P
Sbjct: 456 ---VFKIRISDPACNDN---------EPPCYLEPELEHPLFMEDVDQALALCSEEGGPP- 502
Query: 721 KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEA------ISLFSCLDAFLT 774
H+K+++++T + I D + + +VK+ + +A ++L CL +
Sbjct: 503 -HVKLVIEFTQSAKN----AIIADDTDIIEEHSSVKQLKAQALQGGAPLTLEECLRDYTE 557
Query: 775 EEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL---KNKLDTFVNF 831
E L D W CP C++++ K LD+W LPD+LV H KRF KL V+F
Sbjct: 558 AETLT--DAWRCPHCQQYQPVVKTLDMWSLPDILVVHFKRFRQQTLRGCSSAKLINMVDF 615
Query: 832 PILNLDLSKYMKSK-------------------------DGESYVYDLFAISNHYGG-LG 865
P+ NLD+S ++ +K + +YDL+ I H+G +
Sbjct: 616 PVYNLDMSPHLANKGQNISEDQMIMTNGWSPFKRTRKQSNANDNMYDLYGICYHHGSDIE 675
Query: 866 GGHYTAYAK 874
GHYTA K
Sbjct: 676 TGHYTAACK 684
>gi|332251166|ref|XP_003274719.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 isoform 1
[Nomascus leucogenys]
Length = 1123
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 174/621 (28%), Positives = 271/621 (43%), Gaps = 109/621 (17%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGIPA 321
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAYRFDRKQ----------GGKIKL 596
DE ++L E+Y R FF+ E +++I + +++ A++ G +
Sbjct: 322 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSVSP 378
Query: 597 EIVNRWQEK------SASDYL--------KGSERKLFGAPLVTYLEEEHLSGADIDIAVS 642
+V R ++ S S L G + FG P + E+ +S A + ++
Sbjct: 379 RLVAREGQRFSLSLHSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQLQQSI- 436
Query: 643 KLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
LS +R S + F S+ L CS LS D
Sbjct: 437 --LSKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS-----YLSPKD 475
Query: 703 ERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVK 756
R + D +L KPG H+K+ ++W V E L+ + +
Sbjct: 476 SRPLCHWAV--DRVLHLRKPGGPPHVKLAVEWESSVKERLFGSLQEERAQDADSVWQQQQ 533
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
+Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF
Sbjct: 534 AHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFC 593
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES-----------------------YVYD 853
+NKL T V FP+ L+++ ++ + ++YD
Sbjct: 594 QVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPGCLPTSYPLDFLYD 653
Query: 854 LFAISNHYGGLGGGHYTAYAK 874
L+A+ NH+G L GGHYTAY +
Sbjct: 654 LYAVCNHHGNLQGGHYTAYCR 674
>gi|390462942|ref|XP_002806841.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43 [Callithrix jacchus]
Length = 1123
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 166/619 (26%), Positives = 272/619 (43%), Gaps = 105/619 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGHYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGSVSE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEANKTSENCLSPSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ + +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGIPV 321
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAYRF--DRKQGG----KIKLEIVN 600
DE ++L E+Y R FF+ E +++I + +++ A++ QG + L +
Sbjct: 322 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSLSP 378
Query: 601 RWQEKSASDYL------------------KGSERKLFGAPLVTYLEEEHLSGADIDIAVS 642
R + + + G + FG P + E+ +S A + ++
Sbjct: 379 RLAARESQRFSLSLHSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAISWAQLQQSIL 437
Query: 643 KLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
+ L ++ + + G S+ L CS LS D
Sbjct: 438 SKVCHLMKSEAPVQNLGSL-----------------FSIRVVGLSVACS-----YLSPKD 475
Query: 703 ERISSCKPIQKDSILK-PG--KHIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKT- 758
R + + L+ PG H+K+ ++W V E + ++ + + ++
Sbjct: 476 SRPLCHWAVDRALHLRRPGGPPHVKLAVEWDGSVKERLFGNLQEERAQDADSVWQQQQAH 535
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
RQ + +L C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF
Sbjct: 536 RQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHLKRFCQV 595
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGES-----------------------YVYDLF 855
+NKL T V FP+ L+++ ++ + ++YDL+
Sbjct: 596 GERRNKLSTLVKFPLSGLNMAPHVAQRSTSPDAGLDPWPSWKRPGCLPTSYPLDFLYDLY 655
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+ NH+G L GGHYTAY +
Sbjct: 656 AVCNHHGNLQGGHYTAYCR 674
>gi|328773606|gb|EGF83643.1| hypothetical protein BATDEDRAFT_18712, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 553
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 158/279 (56%), Gaps = 23/279 (8%)
Query: 226 LDDAMLQMDQDILLEVQVD-NGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGY 284
L+D+ L + + E V + S+ + L+ VP E R+++T S+ +T+
Sbjct: 136 LNDSTLVHAESLYTEQHVSSDATSLAVPSSILSTVPFEVHRTTIT-----PKSDENTSTT 190
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
N + +S+ + +D + G GLQNLGNTCFMNSALQCL +T L
Sbjct: 191 LVNSHINNSYSRNHL-IDQPF------------GTTGLQNLGNTCFMNSALQCLSNTVPL 237
Query: 345 AQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRA---AVAPRAFKGKLARFA 400
YFL G + +E+N+ NPLGM+G + + +L+ +LW + + +PR FK +
Sbjct: 238 THYFLFGSWKNEVNSNNPLGMNGRIPKVYANLIHQLWRDDQERPRSFSPREFKHTIGELN 297
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
P F GY Q DS ELL LLDGLHEDLNR+ K Y+E + ++E A W + RN
Sbjct: 298 PTFQGYGQQDSHELLQSLLDGLHEDLNRIINKEYVEDPEMKDMSEDEFAKVSWNAYCKRN 357
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
DS+IVD+FQ Q K+ +C +CS VS+ FDP+MYL +P+P
Sbjct: 358 DSIIVDLFQAQLKNRTICQICSNVSVKFDPYMYLQVPIP 396
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 6/110 (5%)
Query: 771 AFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS---RYLKNKLDT 827
+++ E L DD YC +C EHR KKLD++ PD+LV HLKRF+ + + KLD
Sbjct: 409 SYIFPEILDGDDTMYCSKCMEHRPIRKKLDIYSSPDILVIHLKRFANTGRGGARRTKLDC 468
Query: 828 FVNFPILNLDLSKYMKSK---DGESYVYDLFAISNHYGGLGGGHYTAYAK 874
V+ P+ LD+S+ + + D ++++YDL+A+SNH+GGLGGGHYTA+ K
Sbjct: 469 MVDAPLEGLDMSQVLACESLLDTDAHLYDLYAVSNHFGGLGGGHYTAFVK 518
>gi|398404854|ref|XP_003853893.1| hypothetical protein MYCGRDRAFT_69980 [Zymoseptoria tritici IPO323]
gi|339473776|gb|EGP88869.1| hypothetical protein MYCGRDRAFT_69980 [Zymoseptoria tritici IPO323]
Length = 1442
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 162/285 (56%), Gaps = 11/285 (3%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
K G G+ GLQNLGNTC+MNSALQC+ +LA +FL Y EIN +NPLG HG +A
Sbjct: 472 KDGRPPGVVGLQNLGNTCYMNSALQCIRSVEELAIFFLTKKYKKEINNDNPLGHHGRMAN 531
Query: 371 AFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
A+ ++ ++ ++ ++ P FK L P FSGY Q DSQE L+FL+D LHEDLNR+
Sbjct: 532 AYHSVIEGIYGNNNNSSFRPSHFKTALGNAQPMFSGYGQQDSQEFLSFLVDALHEDLNRI 591
Query: 430 KQKPYIEMKDSGGR----PDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
K+KPYIE DS P+ E+ NH+ RNDS+ +D+F G YK+ + CP C K
Sbjct: 592 KKKPYIENPDSNDATVHLPEAIIELGETYRNNHRLRNDSVAMDLFSGFYKNKMECPKCDK 651
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDP+ LT+ LP V + TV + G P+ V + + K L ++++
Sbjct: 652 VSVTFDPYSLLTVQLPVNV--SFNHTVVFVPLQGPPVRQRVDIDNNATVKALKESVASKH 709
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELI-SSIKDDEHIVAYRFD 587
E+++ +++ F++ L ++IK + I Y D
Sbjct: 710 PGVEASRTTAVEIWHKKVYNVFDDRLSLQEAAIKSHDDIFIYELD 754
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
+ + ++L C E L D+ W+C +CK+HR+A K L++W LPD+LV HLKRF
Sbjct: 1070 RRHKHGVTLEECFAETGKREVLSEDNTWFCNRCKDHRRAAKTLEIWTLPDILVVHLKRFG 1129
Query: 817 YSRYLKNKLDTFVNFPILNLDLS-KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
R ++KLD V FPI LD++ K +DG+ Y+YDLFAI H+GGLGGGHYTA AK
Sbjct: 1130 GGRGSRDKLDINVEFPIEGLDMTDKVGLKEDGKEYIYDLFAIDLHFGGLGGGHYTAMAK 1188
>gi|426384146|ref|XP_004058636.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Gorilla
gorilla gorilla]
Length = 1195
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 173/627 (27%), Positives = 270/627 (43%), Gaps = 121/627 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 171 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 223
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 224 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSE 283
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 284 KLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 339
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 340 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVPA 393
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY---------------------- 584
DE ++L E+Y R FF+ E +++I + +++ A+
Sbjct: 394 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSASP 450
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGAD 636
R ++G + L + S S L G + FG P + E+ +S A
Sbjct: 451 RLAAREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQ 503
Query: 637 IDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSF 696
+ ++ LS +R S + F S+ L CS
Sbjct: 504 LQQSI---LSKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS----- 541
Query: 697 QLSLTDERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHK 750
LS D R + D +L +PG H+K+ ++W V E L+ +
Sbjct: 542 YLSPKDSRPLCHWAV--DRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADS 599
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+
Sbjct: 600 VWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILII 659
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES--------------------- 849
HLKRF +NKL T V FP+ L+++ ++ +
Sbjct: 660 HLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYP 719
Query: 850 --YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 720 LDFLYDLYAVCNHHGNLQGGHYTAYCR 746
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCF+NS++QCL +T L YFLG DY EIN +N LG G LA ++ +++
Sbjct: 105 GRVGLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRSEINHDNFLGSKGALASSYAEVV 164
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ LW G +P FK LA+FAPQF G QHD+QELLA+LLDG+HEDLNRVK KPYI
Sbjct: 165 KHLWLGQGAQHYSPGRFKSSLAKFAPQFDGSQQHDAQELLAYLLDGMHEDLNRVKSKPYI 224
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E D G D+ A W N+ R+ S++VD+FQGQ +S + C VC KVS+ FD FMYL+
Sbjct: 225 EDDDCDGSNDDVDAIAAWSNYLRRDQSIVVDLFQGQLRSRMTCSVCGKVSVKFDSFMYLS 284
Query: 496 LPLPS 500
LP+ +
Sbjct: 285 LPVTA 289
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY-LK 822
+L CL F EE L DD WYCP+CK H A KK+DL+MLP +L+ HLKRF +S +
Sbjct: 293 TLDDCLGLFCEEEYLSGDDAWYCPRCKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRR 352
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K++ +++P+ DLS K + G VYDL+A +H G GGGHYTA A
Sbjct: 353 SKIERDISYPLSEWDLSSSKKGEGGLRPVYDLYAACHHSGTAGGGHYTATA 403
>gi|219113607|ref|XP_002186387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583237|gb|ACI65857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 347
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 1/189 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGN+CF+N+ +QCL H L QYFL G Y DE+N NPLG G +A+++ LL
Sbjct: 2 GSVGLHNLGNSCFLNATIQCLNHIEPLTQYFLQGKYLDELNRNNPLGSGGNVAMSYASLL 61
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+K+W + + PR K +A FAPQF QHDSQE FL+DGLHEDLNRV+ KPY+E
Sbjct: 62 KKMWGGEYSTLVPRLLKQTVASFAPQFDNCYQHDSQEFGQFLMDGLHEDLNRVQTKPYVE 121
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ G PD++ A E W+ H R+DS+IVD QG ++S L CP C + SI FD F +++
Sbjct: 122 ELEGLGMPDDQAAIESWRKHLLRHDSIIVDHCQGMHRSHLTCPRCGRESIKFDIFSSISV 181
Query: 497 PLPSTVTRT 505
PL T ++
Sbjct: 182 PLACTKQKS 190
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY- 817
++ AI L CL+ F+ E L + WYCP+C++H A K + LW +PD+L+ HLKRF++
Sbjct: 188 QKSAIQLQDCLEKFMEGEQLDERNAWYCPKCRQHVCALKMIALWTIPDILIIHLKRFTFD 247
Query: 818 -----SRYLKNKLDTFVNFPILNLDLSKYM--KSKDGESYVYDLFAISNHYGGLG-GGHY 869
L++K+D V FPI LDL+KY+ VY LF +S H G GHY
Sbjct: 248 TCMASGHMLRSKVDDKVEFPIEGLDLTKYILGPVDPDAPPVYRLFGVSEHTGPTANSGHY 307
Query: 870 TAYAK 874
TA +
Sbjct: 308 TATVR 312
>gi|397494598|ref|XP_003818161.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Pan paniscus]
Length = 1115
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 269/624 (43%), Gaps = 121/624 (19%)
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKL 379
GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+R L
Sbjct: 94 GLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYQAAPG-------RAEVTEQLAALVRAL 146
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
W+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 147 WTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSEKLP 206
Query: 440 SGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+ ++L
Sbjct: 207 ----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSL 262
Query: 497 PLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG 550
P+P TR ++VT+ + + S GL +P T+ L ++ + DE
Sbjct: 263 PIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVPADE- 315
Query: 551 LLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY----------------------RFD 587
++L E+Y R FF+ E +++I + +++ A+ R
Sbjct: 316 VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSASPRLA 373
Query: 588 RKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGADIDI 639
++G + L + S S L G + FG P + E+ +S A +
Sbjct: 374 AREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQLQQ 426
Query: 640 AVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLS 699
++ LS +R S + F S+ L CS LS
Sbjct: 427 SI---LSKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS-----YLS 464
Query: 700 LTDERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGF 753
D R + D +L +PG H+K+ ++W V E L+ +
Sbjct: 465 PKDSRPLCHWAV--DRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADSVWQ 522
Query: 754 TVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLK 813
+ +Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+ HLK
Sbjct: 523 QQQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILIIHLK 582
Query: 814 RFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES-----------------------Y 850
RF +NKL T V FP+ L+++ ++ + +
Sbjct: 583 RFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYPLDF 642
Query: 851 VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+A+ NH+G L GGHYTAY +
Sbjct: 643 LYDLYAVCNHHGNLQGGHYTAYCR 666
>gi|189207218|ref|XP_001939943.1| ubiquitin carboxyl-terminal hydrolase 19 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976036|gb|EDU42662.1| ubiquitin carboxyl-terminal hydrolase 19 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1849
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 178/319 (55%), Gaps = 31/319 (9%)
Query: 225 TLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGY 284
TL DA L DQ I+LE + G + T +S AG A + G
Sbjct: 930 TLADAGLTQDQTIVLEEHDEQGEYISDTTK----------VASKNKAGSVA-----SKGL 974
Query: 285 RFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDL 344
+ N G + S G + + + G+ G GL NLGNTC+MNSALQCL +L
Sbjct: 975 QSNPNSGRTTPSG------GPMTRSRKQNGKVRGHVGLTNLGNTCYMNSALQCLRSVEEL 1028
Query: 345 AQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQ 402
+ YFL + + +EIN +NP+G G +A ++ LL ++S +AV+P+ FK KL +
Sbjct: 1029 SMYFLNNKWKEEINVDNPIGHKGVIAKSYAGLLNAIFSLDNNSAVSPKDFKQKLGKANTL 1088
Query: 403 FSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGG---RPDEEVAN--ECWKN-H 456
FSGY Q DSQE +++L+D LHEDLNR+++KPY E DS R E + E ++N H
Sbjct: 1089 FSGYGQQDSQEFVSWLVDALHEDLNRIQKKPYCENPDSTDDTFRDPEAIRKLGEVYRNNH 1148
Query: 457 KARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGS 516
+ARNDS+ +D+F G YK+T+VCP C KVSITFDP+ LTL LP + +T + TV Y
Sbjct: 1149 RARNDSVAMDLFSGFYKNTMVCPDCEKVSITFDPYSQLTLQLP--IEQTWSHTVTYVPLY 1206
Query: 517 GLPMPFTVTLMKHGCCKDL 535
G P V + K+ K L
Sbjct: 1207 GKPYQLEVDIDKNATIKSL 1225
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 84/133 (63%)
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
+ D P + + R+ I+L +C E L D+ WYC +CKE R+ATK L++
Sbjct: 1529 VLDDPEIQEKKANRAARRKNGINLDACFVESSKSEVLSEDNAWYCSRCKELRRATKTLEI 1588
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHY 861
W +PD+L+ HLKRFS R ++K++ V+FP+ LDLS + + + YDLFA+ NHY
Sbjct: 1589 WTVPDILIIHLKRFSGHRTFRDKIEELVDFPVEGLDLSGKVGFPEDKDLTYDLFAVDNHY 1648
Query: 862 GGLGGGHYTAYAK 874
GGLGGGHYTAYA+
Sbjct: 1649 GGLGGGHYTAYAQ 1661
>gi|332848727|ref|XP_511843.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Pan
troglodytes]
Length = 1123
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 175/627 (27%), Positives = 274/627 (43%), Gaps = 121/627 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYQAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVPA 321
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY---------------------- 584
DE ++L E+Y R FF+ E +++I + +++ A+
Sbjct: 322 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSASP 378
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGAD 636
R ++G + L + S S L G + FG P + E+ +S A
Sbjct: 379 RLAAREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQ 431
Query: 637 IDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSF 696
+ ++ LS +R S + L + S+ L CS
Sbjct: 432 LQQSI---LSKVRHLMKSEAP------------VQNLGSLF--SIRVVGLSVACS----- 469
Query: 697 QLSLTDERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHK 750
LS D R + D +L +PG H+K+ ++W V E L+ +
Sbjct: 470 YLSPKDSRPLCHWAV--DRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADS 527
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+
Sbjct: 528 VWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILII 587
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYM--KSKDGES------------------- 849
HLKRF +NKL T V FP+ L+++ ++ +S E+
Sbjct: 588 HLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYP 647
Query: 850 --YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 648 LDFLYDLYAVCNHHGNLQGGHYTAYCR 674
>gi|148612811|ref|NP_694942.3| ubiquitin carboxyl-terminal hydrolase 43 isoform 1 [Homo sapiens]
gi|296452852|sp|Q70EL4.2|UBP43_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 43; AltName:
Full=Deubiquitinating enzyme 43; AltName: Full=Ubiquitin
thioesterase 43; AltName:
Full=Ubiquitin-specific-processing protease 43
gi|219518109|gb|AAI44042.1| Ubiquitin specific peptidase 43 [Homo sapiens]
Length = 1123
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 173/627 (27%), Positives = 270/627 (43%), Gaps = 121/627 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVPA 321
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY---------------------- 584
DE ++L E+Y R FF+ E +++I + +++ A+
Sbjct: 322 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSASP 378
Query: 585 RFDRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGAD 636
R ++G + L + S S L G + FG P + E+ +S A
Sbjct: 379 RLAAREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWAQ 431
Query: 637 IDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSF 696
+ ++ LS +R S + F S+ L CS
Sbjct: 432 LQQSI---LSKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS----- 469
Query: 697 QLSLTDERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHK 750
LS D R + D +L +PG H+K+ ++W V E L+ +
Sbjct: 470 YLSPKDSRPLCHWAV--DRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDADS 527
Query: 751 TGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVF 810
+ +Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+
Sbjct: 528 VWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILII 587
Query: 811 HLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES--------------------- 849
HLKRF +NKL T V FP+ L+++ ++ +
Sbjct: 588 HLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSYP 647
Query: 850 --YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 648 LDFLYDLYAVCNHHGNLQGGHYTAYCR 674
>gi|119911941|ref|XP_583534.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|297486804|ref|XP_002695928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|296476683|tpg|DAA18798.1| TPA: ubiquitin specific peptidase 43 [Bos taurus]
Length = 1121
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 271/612 (44%), Gaps = 90/612 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ L Y E E+ L+
Sbjct: 98 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALRRYRAEPG-------RAEVTEQLAALV 150
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G QHD+ E L +LLD +HEDL + P +
Sbjct: 151 RALWTREYTPQLSAEFKNAVSKYGAQFQGNAQHDALEFLLWLLDRVHEDLEGSSRGPGSD 210
Query: 437 MKDSGGRPDEEVANECWKNHKA---RNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
+P+ +E + A S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 211 KL----QPEARKTSENLLSPSAPLSMGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 266
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPF--TVTLMKHGCCKD-------LILA 538
++LP+P TR ++VT+ + + S GL +P TV ++ ++ +IL
Sbjct: 267 VSLPIPLRQTRFLSVTLVFPSKSQRFLRIGLAVPILSTVAALRKMVAEEGGVSPEEVILV 326
Query: 539 LSTACCLK---IDEGLL--LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
L+ DE L +AE N F+ +P + + S + +V+ ++G +
Sbjct: 327 ELYPSGLQRSFFDEEDLNTIAEGDNVYAFQAPPSPGQEMLSARPSGLLVSPCLAAREGQR 386
Query: 594 IKLEIVNRWQEKSASDYLKGSERKL--FGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
+ L + N L GS ++ FG P + E+ +S + + LS +R
Sbjct: 387 LSLPVHNETSVLILFCNLVGSGQQASRFGPPFLVR-EDRAISWIQLQQCI---LSKVRYL 442
Query: 652 YSSAKAHGGKENGFLPEV-IDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP 710
S EV I L + S+ L CS LS D R
Sbjct: 443 MKS-------------EVPIQNLGSLF--SIRVVGLSLACS-----YLSPQDSRPLCHWA 482
Query: 711 IQKD-SILKPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEAISLF 766
+ + + +PG HIK+ ++W D E L+ + + + +Q + +L
Sbjct: 483 VDRALHLRRPGGPPHIKLAVEWDVDTKERLFGSPQEERVQDADSVRRQQQAHQQHSCTLD 542
Query: 767 SCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD 826
C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF +NKL
Sbjct: 543 ECFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLS 602
Query: 827 TFVNFPILNLDLSKYMKSKDGES------------------------YVYDLFAISNHYG 862
T V FP+ L+++ ++ + ++YDL+A+ NH+G
Sbjct: 603 TLVKFPLAGLNMAPHVAQRSTSPKAMPGAWPPSWKQPACLPTSYPPDFLYDLYAVCNHHG 662
Query: 863 GLGGGHYTAYAK 874
L GGHYTAY +
Sbjct: 663 SLQGGHYTAYCR 674
>gi|148685303|gb|EDL17250.1| mCG67204 [Mus musculus]
Length = 1211
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 261/633 (41%), Gaps = 133/633 (21%)
Query: 331 MNSALQCLVHTPDLAQYF-LGDY----------SDEINTENPLGMHGELALAFGDLLRKL 379
MN+ LQCL +T A+Y LG Y S++ P G GE+ L+R L
Sbjct: 1 MNATLQCLSNTELFAEYLALGQYRAGRPEPEPESEQPAGRGPHG-QGEVTEQLAHLVRAL 59
Query: 380 WSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR-VKQ--KPYIE 436
W+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN VKQ +P ++
Sbjct: 60 WTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLNHAVKQSGQPPLK 119
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
E C + + ++FQ QY+S+L CP C K S TFDPF+ ++L
Sbjct: 120 PPSETDMMPEGPFPVC--------STFVQELFQAQYRSSLTCPHCQKQSNTFDPFLCISL 171
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLL---- 552
P+P TR + VTV Y M V + G L A+S + D+ +L
Sbjct: 172 PIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMETKIPTDQIVLTEMY 231
Query: 553 -------------LAEVYNHQIFRFFENP----AELISSIKD--------------DEHI 581
L V+ FE P E I S + D H
Sbjct: 232 YDGFHRSFSDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNNNLNHLKFGLDHHR 291
Query: 582 VAY---------RFD---RKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEE 629
++ R D R KI L + NR G + K FG P V +LE+
Sbjct: 292 LSSPAPTAAKQGRVDLPTRVASDKIVLLVCNR--------ACTGQQGKRFGLPFVLHLEK 343
Query: 630 EHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVIDELSNSHNESVETAELED 688
D+ ++L ++ FL P V ++ V +
Sbjct: 344 T----VAWDLLQKEILEKMKY--------------FLRPTVSIQVCPFSLRVVSVVGITY 385
Query: 689 LCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY----DPSYIK 743
L +E T ER + SC P H+K++++W + + + YI
Sbjct: 386 LLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWDKETKDFLFVNTEDEYIP 438
Query: 744 DLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWM 803
D V + + + +L C + EE L PDD W CP CK+ +Q + L LW
Sbjct: 439 DAESVRLQ--KEQHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWT 496
Query: 804 LPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS----------------------KY 841
LPDVL+ HLKRF + KL V FP+ LD++ Y
Sbjct: 497 LPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPY 556
Query: 842 MKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+D E Y+YDL+A+ NH+G + GGHYTAY K
Sbjct: 557 GLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCK 589
>gi|320170607|gb|EFW47506.1| ubiquitin specific peptidase 15 [Capsaspora owczarzaki ATCC 30864]
Length = 1232
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 143/237 (60%), Gaps = 12/237 (5%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL N+GNTCFMNS LQC+ +T L +YF+G + DEINT+N LG GE+ L+
Sbjct: 404 GATGLVNIGNTCFMNSVLQCISNTNVLCEYFIGSRFKDEINTKNNLGTKGEVVSQLAHLV 463
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LWS + P FK L + G QHD+QE LA+L+D +HEDLNR+ +KP +E
Sbjct: 464 KDLWSGRFKCIRPDDFKSGLVK------GSLQHDAQEFLAYLMDAIHEDLNRILKKPCVE 517
Query: 437 MKDSGGRP----DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+++ G + ++A + WK+H+ RN+S +VD FQGQ KSTLVCP C + S+ FDPFM
Sbjct: 518 VREGNGTGNILLELQLAVDSWKDHQLRNNSFVVDNFQGQLKSTLVCPGCGRRSVKFDPFM 577
Query: 493 YLTLPLPSTVT-RTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKID 548
YL+LPLP V R +T+ + + + F V G D+ L L+ L +D
Sbjct: 578 YLSLPLPKQVVLRKFIITMVWLDPTRQATRFLVNADPSGTVHDVRLELARLAGLSVD 634
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 88/168 (52%), Gaps = 44/168 (26%)
Query: 751 TGFTVKKT-RQ-----------EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ-ATK 797
TGFT +T RQ E SL C +FL EE LG DD WYC +CK+H++ A K
Sbjct: 908 TGFTEHETLRQHHQRPYSYDSDETFSLHQCFGSFLQEEKLGADDAWYCSKCKQHQEGAVK 967
Query: 798 KLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD----------- 846
KL+LW LPDVL+ HLKRF ++ L+ KL V FP+ ++D+S Y +
Sbjct: 968 KLELWKLPDVLIVHLKRFQFTTRLRKKLTDTVTFPLTDIDMSHYCPNASRIEEALQHPSD 1027
Query: 847 --------------------GESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ +YD++A+ NH+G LGGGHYTA+ K
Sbjct: 1028 DVSPAQLQRATANLETLLGPHKGSLYDVYAVCNHFGSLGGGHYTAFCK 1075
>gi|195998045|ref|XP_002108891.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
gi|190589667|gb|EDV29689.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
Length = 333
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Query: 331 MNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAP 389
MNS LQCL+++ L +YFL Y ++N ENPLGMHGE+A F ++ W ++P
Sbjct: 1 MNSILQCLINSVPLTKYFLTSTYRTDLNRENPLGMHGEVAEEFATIVHASWCGEYRYISP 60
Query: 390 RAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVA 449
FK +++FA +F+G +QHDSQELL LLDGLHED+NRVKQK YIE D+ PDEE A
Sbjct: 61 TDFKLTMSKFADRFAGNSQHDSQELLMILLDGLHEDINRVKQKDYIEDDDTSHLPDEEAA 120
Query: 450 NECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
N W HK RN S+IV++FQGQ+KSTLVC C+K S+TF FM L++PLPS
Sbjct: 121 NIAWDRHKRRNQSIIVELFQGQFKSTLVCLTCNKRSVTFQVFMNLSVPLPS 171
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 758 TRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ + +L CL+ F E + D+ W+C +CK +R+A KKL++W LP VL+ H KRFS
Sbjct: 171 SHRSHCTLNDCLELFSKAERVQGDNKWFCSKCKCYREAMKKLEIWKLPPVLLIHFKRFSG 230
Query: 818 SRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ K DT VNFP+ L L ++ + Y+L+A+SNHYG L GGHYTA+ +
Sbjct: 231 TGLYWQKADTAVNFPVNGLTLKN--QTVGPKHRHYNLYAVSNHYGTLEGGHYTAFCQ 285
>gi|431890876|gb|ELK01755.1| Ubiquitin carboxyl-terminal hydrolase 32 [Pteropus alecto]
Length = 1251
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 196/396 (49%), Gaps = 79/396 (19%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 348 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 407
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I +E+F L + + ++T
Sbjct: 408 ALPRPVIKNSKTEIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 467
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+
Sbjct: 468 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHRLE--------- 517
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
L++Q + + ++ D++ P E S
Sbjct: 518 -YLKIQDEQHLVIEVRNKDMSW-PEEMS-------------------------------- 543
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 544 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 599
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 600 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 659
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANE 451
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E
Sbjct: 660 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAE 695
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 749 HKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVL 808
H++ ++ + E I+L SCL AF +EE LG ++M+YC +CK H ATKKLDLW LP +L
Sbjct: 866 HESVEQSRRAQAEPINLDSCLRAFTSEEELGENEMYYCSKCKTHCLATKKLDLWRLPPIL 925
Query: 809 VFHLKRFSY--SRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+ HLKRF + R++K++ V FP + D S ++ +D
Sbjct: 926 IIHLKRFQFVNGRWIKSQ--KIVKFPRESFDPSAFLVPRD 963
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSI 68
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV D I
Sbjct: 196 PATPEEEGQIIRGWLERESRYGLQPGHNWFIISMQWWQQWKDYVKYDASPI 246
>gi|345559926|gb|EGX43057.1| hypothetical protein AOL_s00215g843 [Arthrobotrys oligospora ATCC
24927]
Length = 1829
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 187/357 (52%), Gaps = 30/357 (8%)
Query: 310 TAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGEL 368
T + G G G NLGNTC+MNSALQC+ +L++YF+ G + E+N NP+ G +
Sbjct: 418 TRRDGRAAGAVGFSNLGNTCYMNSALQCIKSVEELSRYFIEGLHKRELNPRNPISSGGRI 477
Query: 369 ALAFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
A + L+ +++ + + VAPR FKG + + FSGY Q DSQE +++LLD LHEDLN
Sbjct: 478 ATMYAQLVGQVYGQTAGSTVAPREFKGAVGKHNTIFSGYGQQDSQEFVSYLLDILHEDLN 537
Query: 428 RVKQKPYIEMKDSG----GRPDE--EVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVC 481
R+ QKP +E DS G P ++A E W+ ++ RNDS+I+D+F G YKST+ CP+C
Sbjct: 538 RIHQKPVVEFPDSTDEMIGNPAAIAKLAEENWELYRKRNDSVIIDLFAGMYKSTVTCPIC 597
Query: 482 SKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVT----LMKHGCCKDLIL 537
K SI FDP++ LPLP T ++T A + VT + K K L
Sbjct: 598 EKTSIKFDPWLSCQLPLPVENLWTKSITFVPAAKTISKYEKLVTVHVEMEKFATIKQLKD 657
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFD---------- 587
+ T + I + L+++EV+ ++ ++ E+ + +I ++ I Y +
Sbjct: 658 YVGTRVGVGIKK-LVVSEVFRNKFYKHHEDNKTVSEAIMPNDQIYVYEVEETPTNFPPPK 716
Query: 588 ----RKQGGKIKLE--IVNRWQEKSASDYLKGSERKLFGAPLVTYL-EEEHLSGADI 637
R GG++ + + W + + D +E K P+ L + GAD+
Sbjct: 717 RKKQRTYGGRLTMSNMFMTSWDDDESEDDFDKTETKELLVPIFNRLYRDNRRMGADL 773
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
I + C D F EE L D+ WYCP+CKEHR A K + +W +PD++ KRFS +R
Sbjct: 1082 GIHIDDCFDEFGREEILNDDNQWYCPRCKEHRNAKKSMQIWRVPDIIALQFKRFSSTRSF 1141
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
++K+D ++FPI LDL+ + DG+S +YDL A+ NH+GGLGGGHYTA A+
Sbjct: 1142 RDKIDAAIDFPIEGLDLTGRVLESDGKSLIYDLIAVDNHFGGLGGGHYTANAR 1194
>gi|410985099|ref|XP_003998862.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Felis catus]
Length = 1210
Score = 195 bits (495), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/619 (26%), Positives = 244/619 (39%), Gaps = 133/619 (21%)
Query: 343 DLAQYFLGDYSDEINTENPLGM----HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLAR 398
+ Y G + E P+G GE+ L+R LW+ R FK +++
Sbjct: 15 EAGHYRAGRPEPSPDPEQPVGRGTQGQGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSK 74
Query: 399 FAPQFSGYNQHDSQELLAFLLDGLHEDLNRV----KQKPYIEMKDSGGRPDEEVANECWK 454
A Q+ G +QHD+QE L +LLD +HEDLN Q P ++ P+ C
Sbjct: 75 NALQYRGNSQHDAQEFLLWLLDRVHEDLNHAVKQSGQPPLKPPSETDMMPEGPSFPVC-- 132
Query: 455 NHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYAN 514
+ + ++FQ QY+S+L CP C K S TFDPF+ ++LP+P TR + VTV Y
Sbjct: 133 ------STFVQELFQAQYRSSLTCPHCQKQSNTFDPFLCISLPIPLPHTRPLYVTVVYQG 186
Query: 515 --------GSGLPMPFTVTLMKHGCC---------------------------------- 532
G +P+ TV ++
Sbjct: 187 KCSHCMRIGVAVPLSGTVARLREAVSMETKIPTDQIVLTEMYYDGFHRSFCDTDDLETVH 246
Query: 533 -KDLILALSTACCLKID-----EGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
D I A T + + G+ L NH F + + +
Sbjct: 247 ESDCIFAFETPEIFRPEGILSQRGIHLNNNLNHLKFGLDHHRLSSCTQAATKQGKTDLPL 306
Query: 587 DRKQGGKIKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLS 646
R G KI L + NR G + K FG P V +LE+ D+ ++L
Sbjct: 307 TRPGGDKIVLLVCNR--------ACTGQQGKRFGLPFVLHLEKT----IAWDLLQKEILE 354
Query: 647 PLRRTYSSAKAHGGKENGFL-PEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDER- 704
++ FL P V ++ V + L +E T ER
Sbjct: 355 KMKY--------------FLRPTVCIQVCPFSLRVVSVVGITYLLPQEEKPLCHPTVERA 400
Query: 705 ISSCKPIQKDSILKPGKHIKVLLDWTDDVHELY----DPSYIKDLPVVHKTGFTVKKTRQ 760
+ SC P H+K++++W + + + YI D V +++ R
Sbjct: 401 LKSCGPGGT-------AHVKLVVEWDKETKDFLFVNTEDEYIPDAESVR-----LQRERH 448
Query: 761 ---EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY 817
+ +L C + EE L PDD W CP CK+ +Q + L LW LPDVL+ HLKRF
Sbjct: 449 HQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQ 508
Query: 818 SRYLKNKLDTFVNFPILNLDLS----------------------KYMKSKDGESYVYDLF 855
+ KL V FP+ LD++ Y +D E YVYDL+
Sbjct: 509 EGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGRDPEDYVYDLY 568
Query: 856 AISNHYGGLGGGHYTAYAK 874
A+ NH+G + GGHYTAY K
Sbjct: 569 AVCNHHGTMQGGHYTAYCK 587
>gi|74151424|dbj|BAE38827.1| unnamed protein product [Mus musculus]
Length = 367
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 201/415 (48%), Gaps = 82/415 (19%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + Q Q + N + L+ G +FL+ WY+ WE YV G + D +F
Sbjct: 28 PDLDEQWRQ-IGNGRERPLRAGESWFLVEKHWYKQWEVYVKGGDQ--DASTF-------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+N+ + ++ +R L EG DYVL+P W + WY
Sbjct: 77 -------PGCINNAGLFEDQIS------WHLRERLLEGDDYVLLPAPAWNYMVSWYGLMD 123
Query: 139 GGPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKL 196
G P + RK+I GI ++VEV+ L L L+ D + I+ S S + + +
Sbjct: 124 GQPPIERKVIELPGI---RKVEVYPLELLLVQHSDMETALTIQFSYTDSVELVLQTAREQ 180
Query: 197 RGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 181 FLVEPQEDTRLWTK-NSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDG--------- 230
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+ S + G N P D D+ +
Sbjct: 231 --------TWPSAQLCG-------------MNNIP---------DEDEDFQG-------- 252
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ D
Sbjct: 253 QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYAD 312
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
L+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRV
Sbjct: 313 LVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRV 367
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTC+MNS +Q L L + FL D Y +IN +N LG G +A F +
Sbjct: 583 GYTGLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNFLGHKGLVAEHFAVVA 642
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ LW G PR FK LA P F Y Q D+QELL FLLDGLHEDLN+VK + YIE
Sbjct: 643 KGLWHGGFKNFQPRMFKEALASCNPIFGNYKQQDAQELLIFLLDGLHEDLNKVKDRRYIE 702
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD+ GRPD+ VA+E W+NH N S+IVD+FQGQ+K+T+ C C S+ FD FM+L+L
Sbjct: 703 EKDADGRPDQLVADESWENHTRLNKSIIVDLFQGQFKATIKCLSCKFTSVKFDAFMFLSL 762
Query: 497 PLPSTVTRTM 506
P+P++ T+
Sbjct: 763 PIPTSGKATL 772
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L SCL+ F E L DD W CP+CK R A + L LW +P +L+ HLKRF K+
Sbjct: 771 TLESCLNLFQQTEKLTGDDRWTCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDGRWKS 830
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGG-LGGGHYTA 871
K+ T +++P DL K + Y+L A+++H G GHY A
Sbjct: 831 KVSTNISYPTTGFDLKPQTLGKKKQP-PYNLIAVTHHIGASTDSGHYVA 878
>gi|40788175|emb|CAE47744.2| ubiquitin specific proteinase 43 [Homo sapiens]
Length = 1124
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 272/628 (43%), Gaps = 122/628 (19%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSG-RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
R LW+ ++ F+ ++++ QF G +QHD+ E L +LLD +HEDL + P
Sbjct: 152 RALWTREYTPQLSAEFFQNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVS 211
Query: 436 EMKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
E P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 EQLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFL 267
Query: 493 YLTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLK 546
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 268 CVSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVP 321
Query: 547 IDEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY--------------------- 584
DE ++L E+Y R FF+ E +++I + +++ A+
Sbjct: 322 ADE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTLSAHPLGLSAS 378
Query: 585 -RFDRKQGGKIKLEIVNRWQEKSASDYL--------KGSERKLFGAPLVTYLEEEHLSGA 635
R ++G + L + S S L G + FG P + E+ +S A
Sbjct: 379 PRLAAREGQRFSLSL------HSESKVLILFCNLVGSGQQASRFGPPFLIR-EDRAVSWA 431
Query: 636 DIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELS 695
+ ++ LS +R S + F S+ L CS
Sbjct: 432 QLQQSI---LSKVRHLMKSEAPVQNLGSLF--------------SIRVVGLSVACS---- 470
Query: 696 FQLSLTDERISSCKPIQKDSIL---KPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVH 749
LS D R + D +L +PG H+K+ ++W V E L+ +
Sbjct: 471 -YLSPKDSRPLCHWAV--DRVLHLRRPGGPPHVKLAVEWDSSVKERLFGSLQEERAQDAD 527
Query: 750 KTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLV 809
+ +Q + +L C + EE L DD W CP C+ +Q KL LW LPD+L+
Sbjct: 528 SVWQQQQAHQQHSCTLDECFQFYTKEEQLAQDDAWKCPHCQVLQQGMVKLSLWTLPDILI 587
Query: 810 FHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES-------------------- 849
HLKRF +NKL T V FP+ L+++ ++ +
Sbjct: 588 IHLKRFCQVGERRNKLSTLVKFPLSGLNMAPHVAQRSTSPEAGLGPWPSWKQPDCLPTSY 647
Query: 850 ---YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 648 PLDFLYDLYAVCNHHGNLQGGHYTAYCR 675
>gi|224139982|ref|XP_002323369.1| predicted protein [Populus trichocarpa]
gi|222867999|gb|EEF05130.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 206/440 (46%), Gaps = 72/440 (16%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLR 377
G G +NLGNTCFMNSA+QCL H+P L FLGDY EIN ENP+G GELALAFGDLL
Sbjct: 13 GEHGKENLGNTCFMNSAIQCLAHSPKLVDCFLGDYRKEINQENPIGTKGELALAFGDLLS 72
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEM 437
KLW+ GR VAP FK KLA F+PQF GYNQHDSQ
Sbjct: 73 KLWTPGRTPVAPAIFKRKLADFSPQFIGYNQHDSQ------------------------- 107
Query: 438 KDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
G V C K S+ D F L P+ S T +TL
Sbjct: 108 ---GQYQSTLVCPACNKK------SVTYDPFM-----YLSLPLPSTTMRT------MTLT 147
Query: 498 LPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK-IDEGLLLAEV 556
+ ST R + P P TVT+ K G KDLI ALS AC + IDE L++ E+
Sbjct: 148 ILSTDGRNL------------PSPITVTVPKCGRLKDLIGALSIACSSRDIDEMLMVVEI 195
Query: 557 YNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLKGSER 616
Y ++IFR P++ ++ I+D++ +VAYR + + + ++ E+
Sbjct: 196 YKNKIFRPTTKPSDSVALIRDEDKLVAYRLPKDNQNSLLVVFMHERVERPCEFERAIPNL 255
Query: 617 KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSA------KAHGGKENGFLPEVI 670
KLFG P V LE+ +G D+ KL SPL A E+ + V
Sbjct: 256 KLFGIPFVARLEDLS-TGFDLHKLYLKLHSPLLMPAEDACDDYDDVGITTSEDSTMENV- 313
Query: 671 DELSNSHNESVETAELEDLCSRELSFQLSLTDE-RISSCKPIQKDSILKPGKHIKVLLDW 729
LS + ++T +D CS F+ L D R + K + K ++V + W
Sbjct: 314 --LSPTIYTGLDTGTEDDQCSSS-DFRFYLKDGLRSTEMKMNDPLPVPKFNDDLEVYVTW 370
Query: 730 TDDVHELYDPSY--IKDLPV 747
+++ E YD ++D P+
Sbjct: 371 SENTIEKYDTCLLNLEDFPI 390
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 830 NFPILNLDLSKYMKSKDGE-SYVYDLFAISNHYGGLGGGHYTA 871
+FPI + +LS Y+ KD + S Y L+A SNH+ G+G GHY A
Sbjct: 387 DFPIDDFELSTYISQKDSQFSNHYVLYATSNHHEGMGCGHYDA 429
>gi|402592599|gb|EJW86527.1| ubiquitin carboxyl-terminal hydrolase, partial [Wuchereria
bancrofti]
Length = 524
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 233/516 (45%), Gaps = 72/516 (13%)
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
P F+ +QHD QE L+ LLD LHEDLN+++ KP+IE+ DS GRPD VA E W H R+
Sbjct: 8 PVFAERSQHDCQEFLSILLDLLHEDLNQIENKPFIELNDSDGRPDSIVAKEAWDAHLKRD 67
Query: 461 DSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP---------STVTRTMTVTVF 511
S+IVD+F GQ +STL C C+ +S FD F L LP+P V R + +
Sbjct: 68 KSIIVDLFTGQLRSTLTCLNCNAISCRFDAFTCLQLPIPIDHLLLISVVVVKRDGQIPIR 127
Query: 512 Y-----------------ANGSG-LPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLL 553
Y AN SG LP F + + ++ +S + +D+
Sbjct: 128 YAFRLSCDTTIGMFKMKLANASGLLPNSFQILCLNRA--GQMMQGVSES----VDDDNSS 181
Query: 554 AEVY-NHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGKIKLEIVNRWQEKSASDYLK 612
VY N + FE PAE S + E VA I + + YL
Sbjct: 182 INVYPNDALLYAFELPAEDQS---NSECFVA----------APTVIAAHRKMQYNDSYLL 228
Query: 613 GSER----KLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPE 668
G+ R ++FG PL+ +G + V +S + S+ K +E +
Sbjct: 229 GATRGCTARVFGVPLILRFTPGKTTGNKLYEEVWLHVSRFLKNGSAGKQQRTREANRAID 288
Query: 669 VIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKP---IQKDSILKPGKHIKV 725
+++ N + DLC +LSF+ + C+ + D I++ + V
Sbjct: 289 AAEDIRNGYP--------FDLCCVKLSFEWCSKCPWPAFCRGCVILSNDEIIE-DNLMAV 339
Query: 726 LLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWY 785
+DW L ++ L + + SL SCL+ F+ E L DD
Sbjct: 340 AIDWKPTALYLRYQHSVELLCRDDGSVLQAWEVHYRPCSLVSCLNDFMQAERL--DDEIM 397
Query: 786 CPQCKEHRQATKKLDLWMLPDVLVFHLKRF----SYSRYLKNKLDTFVNFPILNLDLSKY 841
C C + TK L +W LP +L+ H KRF S R++K+ V+FP+ NLDL ++
Sbjct: 398 CKPCGKKCPTTKALAIWRLPKILIIHFKRFVCVKSERRWMKSC--KVVDFPLENLDLREW 455
Query: 842 MKSKDGE-SYVYDLFAISNHYGGLGGGHYTAYAKVN 876
++ D + S Y FAI+NHYG + GHY AYAK N
Sbjct: 456 LRDPDVKTSTKYSCFAIANHYGAMASGHYVAYAKNN 491
>gi|311268397|ref|XP_003132035.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Sus scrofa]
Length = 1123
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/610 (26%), Positives = 267/610 (43%), Gaps = 87/610 (14%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y + E+ L+
Sbjct: 101 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRA-------VPGRAEVTEQLAALV 153
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P +
Sbjct: 154 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSARGPTAD 213
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 214 KL----LPEARKTSENPPSPSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 269
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPF--TVTLMKHGCCKDLILALSTACCL 545
++LP+P TR ++VT+ + + S GL +P TV ++ ++ + + +
Sbjct: 270 VSLPIPLRQTRFLSVTLVFLSQSQRFLRVGLAVPILSTVAALRKMVAEEGGIPAAEVILV 329
Query: 546 KI----------DEGLL--LAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
++ DE L +AE N F+ +P + + S V+ R ++G +
Sbjct: 330 ELYPNGLQRSFFDEEDLNTIAEGDNVYAFQAPPSPGQEMLSACPPGLPVSPRLAAREGQR 389
Query: 594 IKLEIVNRWQEKSASDYLKGSERKL--FGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
+ + + L GS ++ FG P + E+ +S A + ++ + L +
Sbjct: 390 LSRPVPGENKVLILFCNLVGSGQQASRFGPPFLIR-EDRAISWAQLQQSILNKVRYLMKG 448
Query: 652 YSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPI 711
+ + G S+ L CS LS D R +
Sbjct: 449 EAPVQNPGSLF-----------------SIRVVGLSLACS-----YLSPQDSRPLCHWAV 486
Query: 712 QKD-SILKPG--KHIKVLLDWTDDVHE-LYDPSYIKDLPVVHKTGFTVKKTRQEAISLFS 767
+ + +PG H+K+ ++W E L+ + + + +Q + +L
Sbjct: 487 DRALHLRRPGGPSHVKLAVEWDSGTQERLFGSVQEERVQDADSVWQQQQAHQQHSCTLDE 546
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
C + EE L DD W CP C+ +Q KL LW LPD+L+ HLKRF +NKL T
Sbjct: 547 CFQFYTKEEQLAQDDAWRCPHCQALQQGVVKLSLWTLPDILIIHLKRFCQVGERRNKLST 606
Query: 828 FVNFPILNLDLSKYMKSKDG-----------------------ESYVYDLFAISNHYGGL 864
V FP+ LD++ ++ + ++YDL+A+ NH G L
Sbjct: 607 LVKFPLSGLDMAPHVAQRSTGPKGAPGPWPSWKQPACLPTSYPPDFLYDLYAVCNHQGSL 666
Query: 865 GGGHYTAYAK 874
GGHYTAY +
Sbjct: 667 QGGHYTAYCR 676
>gi|351701613|gb|EHB04532.1| Ubiquitin carboxyl-terminal hydrolase 43 [Heterocephalus glaber]
Length = 1130
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/630 (26%), Positives = 270/630 (42%), Gaps = 114/630 (18%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 101 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTQQLAALV 153
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL---------- 426
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL
Sbjct: 154 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGLVGR 213
Query: 427 ----NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
N +++ + E + + + S + FQ QY+S+L CP C
Sbjct: 214 WIVSNLASFPVSLQLLPEASKTPENLQSS--SAQLSLGQSFVQSHFQAQYRSSLTCPHCL 271
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K S TFDPF+ ++LP+P TR +TVT+ + S ++ G ++ ++
Sbjct: 272 KQSNTFDPFLCVSLPIPLRQTRFLTVTLVFPCKS-------QRFLRVGLAVPILSTVAAL 324
Query: 543 CCLKIDEG------LLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAY----------- 584
+ +EG ++L E+Y + R FF+ E +++I + +++ A+
Sbjct: 325 RKMAAEEGGVPADEVILVELYPNGFQRSFFDE--EDLNTIAEGDNVYAFQVPPSPSQGTL 382
Query: 585 -----------RFDRKQGGKIKLEIVNRWQEKSASDYLKGSERKL--FGAPLVTYLEEEH 631
R ++G + L + + + L GS ++ FG P + E+
Sbjct: 383 SAHAPSLPLSPRLVAQEGQRFSLPLHSENKVLILFCNLVGSGQQASRFGPPFLIR-EDRT 441
Query: 632 LSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCS 691
+S A + + + L R+ + A+ G S+ L CS
Sbjct: 442 ISWAQLQQCILSKVRCLMRSDAPAQNLGSL-----------------FSIRVVGLPLACS 484
Query: 692 RELSFQLSLTDERISSCKPIQKDSILK-PG--KHIKVLLDWTDDVHE-LYDPSYIKDLPV 747
LS D R + + L+ PG H+K+ ++W E L+ + +P
Sbjct: 485 -----YLSPLDSRPLCHWAVDRALHLRRPGGPPHVKLAVEWDCATKECLFGSLQEEQVPD 539
Query: 748 VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDV 807
+ +Q + +L C + EE L DD W CP CK +Q KL LW LP++
Sbjct: 540 ADSVWRQQQAHQQPSCTLDECFQFYTKEEQLAQDDAWKCPHCKVLQQGMVKLSLWTLPNI 599
Query: 808 LVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGES------------------ 849
L+ HLKRF +NKL T + FP+ LD++ ++ +
Sbjct: 600 LIIHLKRFCQVGERRNKLSTLIKFPLSGLDMAPHVAQRSTSCKPVPGPWPSWKQPASLPT 659
Query: 850 -----YVYDLFAISNHYGGLGGGHYTAYAK 874
++YDL+A+ NH+G L GGHYTAY +
Sbjct: 660 SYPVDFLYDLYAVCNHHGSLQGGHYTAYCR 689
>gi|224010108|ref|XP_002294012.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970684|gb|EED89021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1472
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGN+C+MNS LQC+ H P + QYFL G+Y E+N NPLG G++A A+ L
Sbjct: 1092 GSVGLHNLGNSCYMNSILQCINHIPSITQYFLKGEYQKEVNKNNPLGSGGKVATAYASFL 1151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+W+ + +APR K + +APQF+ QHDSQE +L+DGLHEDLNRVK KPY+E
Sbjct: 1152 NDIWTGEYSILAPRLLKQIVGCYAPQFNNNYQHDSQEFHQYLMDGLHEDLNRVKDKPYVE 1211
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ G D+ A E WK H R+DSL VD QG ++S L CP C K SI FD + ++L
Sbjct: 1212 DVEALGMKDDRAAIESWKKHLLRHDSLFVDYTQGLHRSHLTCPSCGKESIKFDVYSSISL 1271
Query: 497 PLPSTVTR 504
PL + R
Sbjct: 1272 PLVPSKNR 1279
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
V + +I L CLD F E L + WYC CK+H A K + LW PDVLV HLKR
Sbjct: 1274 VPSKNRPSIPLEDCLDQFAAGEQLDEHNAWYCSGCKKHVCALKLITLWNTPDVLVLHLKR 1333
Query: 815 FSY-------SRYLKNKLDTFVNFPILNLDLSKY-MKSKDGES-YVYDLFAISNHYGGLG 865
F+Y R +++K++ V+FPI LDL+ Y + KD ++ +Y LF +S H G
Sbjct: 1334 FTYEKCSQVDGRIIRSKIEDKVDFPIDRLDLTPYVLGPKDPDAPPIYKLFGVSEHTGATA 1393
Query: 866 -GGHYTAYAK 874
GHYTA +
Sbjct: 1394 NSGHYTATVR 1403
>gi|154415957|ref|XP_001581002.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121915225|gb|EAY20016.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 877
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Query: 317 GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDL 375
G GL N+GNTC+ NS +QCL+H+ LA+ LG ++ EIN NPLG G L AF L
Sbjct: 182 SGKCGLINIGNTCYFNSGVQCLLHSLPLARQLLGSNWRSEINENNPLGAKGYLVKAFARL 241
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
++WS+ +A+ P K L FAPQF G+ Q D EL+ FLLDG+HEDLNR K KP +
Sbjct: 242 NSRVWSAQESAINPSDLKHVLGDFAPQFQGFEQQDPHELIMFLLDGIHEDLNRCKNKPLV 301
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E G DE+ + E WK HK RNDS+IVD F GQ +S +CP C ++ FDPF+ L+
Sbjct: 302 ETIIGDGTNDEKTSLEAWKTHKLRNDSIIVDNFHGQLRSRCICPKCHSTTVVFDPFVALS 361
Query: 496 LPL 498
LP+
Sbjct: 362 LPI 364
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+ L C D F EE L ++MW+CP+C+E A KK+DLW L+ HLKRF +
Sbjct: 617 VKLEECFDYFRQEEILDENNMWFCPKCREFVCANKKMDLWKASKCLIIHLKRFETTETGT 676
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
K + V+FP LD+ ++ + Y L+AIS H+G LG GH TA+A V
Sbjct: 677 EKDERVVHFPD-ELDIKPFLAGPVEGNTKYRLYAISEHFGSLGFGHCTAHAIV 728
>gi|330926072|ref|XP_003301313.1| hypothetical protein PTT_12782 [Pyrenophora teres f. teres 0-1]
gi|311324069|gb|EFQ90584.1| hypothetical protein PTT_12782 [Pyrenophora teres f. teres 0-1]
Length = 2100
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 147/232 (63%), Gaps = 10/232 (4%)
Query: 312 KKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELAL 370
+ G+ G GL NLGNTC+MNSALQCL +L+ YFL + + +EIN +NP+G G +A
Sbjct: 1101 QNGKVRGHVGLTNLGNTCYMNSALQCLRSVEELSMYFLNNKWKEEINVDNPIGHKGVIAK 1160
Query: 371 AFGDLLRKLWS-SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV 429
++ LL ++S +AV+P+ FK KL + FSGY Q DSQE +++L+D LHEDLNR+
Sbjct: 1161 SYAGLLSAIFSLDNNSAVSPKDFKQKLGKANTLFSGYGQQDSQEFVSWLVDALHEDLNRI 1220
Query: 430 KQKPYIEMKDSGG---RPDEEVAN--ECWKN-HKARNDSLIVDVFQGQYKSTLVCPVCSK 483
+KPY E DS R E + E ++N H+ARNDS+ +D+F G YK+T+VCP C K
Sbjct: 1221 HKKPYCENPDSTDDTFRDPEAIRKLGEVYRNNHRARNDSVAMDLFSGFYKNTMVCPDCEK 1280
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
VSITFDP+ LTL LP + +T + T+ Y G P V + K+ K L
Sbjct: 1281 VSITFDPYSQLTLQLP--IEQTWSHTITYVPLYGKPYQLEVDIDKNATIKAL 1330
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 85/133 (63%)
Query: 742 IKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDL 801
+ D P + + R+ I+L +C E L D+ WYC +CKE R+ATK L++
Sbjct: 1729 VLDDPEIQEKKANRAARRKNGINLDACFVESSKSEVLSEDNAWYCSRCKELRRATKTLEI 1788
Query: 802 WMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHY 861
W +PD+L+ HLKRFS R ++K++ V+FP+ LDLS + +G+ YDLFA+ NHY
Sbjct: 1789 WTVPDILIIHLKRFSGHRTFRDKIEELVDFPVEGLDLSGKVGFPEGKDLTYDLFAVDNHY 1848
Query: 862 GGLGGGHYTAYAK 874
GGLGGGHYTAYA+
Sbjct: 1849 GGLGGGHYTAYAQ 1861
>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
[Strongylocentrotus purpuratus]
Length = 1187
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 314 GEKG-GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
G +G L GL+NLGNTCFMNS +QCL +T LA+YF+ D Y +IN NPLG GE+A
Sbjct: 843 GNQGRALTGLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANPLGRGGEVAEE 902
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGY--NQHDSQELLAFLLDGLHEDLNRV 429
F ++R WS ++APR + + ++ P+F + + HDSQE L FLLDGLHEDLN V
Sbjct: 903 FAVVVRANWSGQYRSIAPRDLRDTVTKYVPEFRKHVGHHHDSQEFLLFLLDGLHEDLNEV 962
Query: 430 KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
K++ YI+ +D PD E A W+NH+ N S+IV +FQGQ+KST+ C C+ S+ F+
Sbjct: 963 KKRQYIKEEDFSKYPDHEAAGLSWRNHEKLNRSIIVSLFQGQFKSTVRCLSCNNKSVKFE 1022
Query: 490 PFMYLTLPLPS 500
FMYL+LP+ S
Sbjct: 1023 AFMYLSLPIAS 1033
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL CL F E L D+ +C CK +R++ K + +W LP +L+ HLKRF Y +
Sbjct: 1038 SLHECLQQFSKPEELTGDNATHCTHCKGNRKSEKTILIWKLPHILLIHLKRFYYEGMWRQ 1097
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
KL T V+FP +L + +Y+ + +Y L+ +SNH G L GGHYTA
Sbjct: 1098 KLQTNVDFPN-DLTMDRYVIGP-AQRNIYQLYGVSNHSGTLDGGHYTA 1143
>gi|118399164|ref|XP_001031908.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286243|gb|EAR84245.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 680
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 21/206 (10%)
Query: 315 EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFG 373
E GL GL NLGNTCFMNSALQCL + P L YFL + EIN ++ LG G++ F
Sbjct: 79 EISGLVGLSNLGNTCFMNSALQCLSNVPPLCDYFLSKLHEKEINYDSFLGSQGKITQQFA 138
Query: 374 DLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE--------- 424
+L+ +W++ + + P+ F + F PQF+ +Q DS E LAFL+D LHE
Sbjct: 139 ELMIDMWNTSDSYIIPQKFLRAIGNFGPQFADGSQQDSHEFLAFLMDILHEVSQLTNQLQ 198
Query: 425 -----------DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
DLNRVKQKPYIE KD G E+ A ECWK + RN S+IVD+FQGQ K
Sbjct: 199 QNKQNFFEIYKDLNRVKQKPYIEGKDYNGNDYEKYAKECWKEYLMRNRSIIVDLFQGQTK 258
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLP 499
STL C C+ VS F+ FMYL++P+P
Sbjct: 259 STLRCLKCNTVSHKFETFMYLSVPIP 284
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 79/114 (69%)
Query: 761 EAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
E+ SL C+ F EE L ++W+CP+CK+H+++TKK+DLW +P++L+ HLKRF +++
Sbjct: 303 ESFSLQRCIQEFTKEEKLERGELWFCPKCKKHQESTKKIDLWKMPNILIIHLKRFEFNKD 362
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
+ KL ++FPI N D+S K + +YDLFA+SNH G L GHYT+YAK
Sbjct: 363 RRCKLSNKIDFPIKNFDISSLTAGKQRDIPIYDLFAVSNHGGTLSSGHYTSYAK 416
>gi|123446292|ref|XP_001311898.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121893725|gb|EAX98968.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1201
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 168/313 (53%), Gaps = 14/313 (4%)
Query: 205 RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPS 264
R++DY+NK S L++ + LDD + DILL+ ++ NG T +P + +
Sbjct: 343 RLFDYYNKTLSNQ-LEIG-KYLDDYSIATVNDILLDYKLKNGSWYSET------IP-KYN 393
Query: 265 RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQN 324
+S T ++ +TT Y + Q P + + SY T G G QN
Sbjct: 394 TTSYTGTYNFNYNDSYTTSYNY-QTPSYNSYNYNHYGGYYGYSYGTPPGP---GKVGFQN 449
Query: 325 LGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSG 383
LGNTCF NS +QCL+H+ L + LG+ + +IN NPLG G L AF LL ++WS
Sbjct: 450 LGNTCFFNSGIQCLMHSKPLVKMLLGESWKQDINEINPLGTKGRLVRAFQKLLEEVWSGN 509
Query: 384 RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGR 443
+AP K + F+ +F+G+ Q DS EL+ F+LDG+HEDLNR + KP I+ G
Sbjct: 510 SRVLAPSELKQVIGEFSSRFAGWGQQDSHELITFMLDGIHEDLNRCRVKPQIDTVIGDGI 569
Query: 444 PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVT 503
D E A+ W NH RNDS+I D+F Q +S +CP C K + FDP+ +L+LP+ +
Sbjct: 570 NDAETADLAWTNHMKRNDSIIHDIFYAQLRSRCICPKCGKTIVVFDPYSHLSLPISNPKI 629
Query: 504 RTMTVTVFYANGS 516
+ + VT N S
Sbjct: 630 KQVKVTFVPYNFS 642
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
++L C + F TEE L D+ W CP C++ ATKK+DLW +P LV HLKRFS Y
Sbjct: 884 GVTLDKCFEYFCTEEVLDEDNEWRCPNCEQFVCATKKMDLWSVPKCLVIHLKRFSAGEYY 943
Query: 822 KNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
+K + +V++P + +D+ KY+ Y L+A+S H G LGGGHYTA+A V
Sbjct: 944 SHKDERYVDYPDV-IDIGKYIVGPHPGCTKYQLYAVSEHMGSLGGGHYTAHAVV 996
>gi|387219077|gb|AFJ69247.1| ubiquitinspecific protease [Nannochloropsis gaditana CCMP526]
Length = 879
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 134/222 (60%), Gaps = 6/222 (2%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLR 377
L GL NLGNTCF+N+ LQCL HTP L +YFL Y ++N N LG G A + LL+
Sbjct: 40 LVGLHNLGNTCFLNAPLQCLSHTPILTEYFLSRAYLRDVNLHNILGTQGRCAQLYATLLQ 99
Query: 378 KLWSSGRA---AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
+LW+ +V PRA + + F+G++QHD+QELLAFLL L EDLNRVK+K Y
Sbjct: 100 ELWAETGGVPRSVNPRAIRDLIGAQG-LFTGHDQHDAQELLAFLLSTLSEDLNRVKKKSY 158
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
IE DS GRPD E+A+ W NH R SL+ +F GQYK+T CP C+ VS F+PF L
Sbjct: 159 IEQPDSDGRPDHELADIWWHNHFKRELSLVAALFTGQYKTTTACPTCNYVSARFEPFTVL 218
Query: 495 TLPLPSTVTRTMTVTVFYANGS-GLPMPFTVTLMKHGCCKDL 535
LPLP R ++V A+ P+ +V + K G D+
Sbjct: 219 QLPLPEETHRNISVLYVPADQEIQTPVHLSVQVSKQGSMADV 260
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 66/252 (26%)
Query: 687 EDLCSREL----SFQLSLTDERISSC-------------KPIQKDSILKPGKHIKVLLDW 729
E +C E+ F+L L S+C P D +L V +DW
Sbjct: 534 ESVCGGEIPRPWGFRLRLVTTEGSTCCRCAWKESCLGCLIPASPDYVLTLHVGEAVAVDW 593
Query: 730 TDDV--HELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCP 787
V ++ P+ + VH + ++ E +SL +CLD + EE L D YC
Sbjct: 594 HVSVVKEHMHVPTLVAS--QVHPSLLRHRREEAEGLSLQACLDVCMREEALA--DEVYCS 649
Query: 788 QCKEHRQ-ATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKD 846
+CK H+ A +K +LW LP +L+ HLKRF +++ + KL+ V FP+ +LDL+ Y+ S
Sbjct: 650 RCKAHQSGARRKEELWRLPPLLIIHLKRFQFTQQSRRKLNARVRFPLDDLDLAPYLASAA 709
Query: 847 GESYV------------------------------------------YDLFAISNHYGGL 864
Y L+AI +H G L
Sbjct: 710 TAGAGHAGKEHVSKASHSSSSLNAPPPTPSLASAGSSCCLSSASSSRYTLYAIIHHVGAL 769
Query: 865 GGGHYTAYAKVN 876
GHY + +VN
Sbjct: 770 QAGHYVSTIRVN 781
>gi|123438389|ref|XP_001309979.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121891729|gb|EAX97049.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1803
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 130/223 (58%), Gaps = 1/223 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ G +NLGNTC+ NS +QC++H+ L ++ LGD + D+IN NPLGM G+L F L
Sbjct: 177 GMIGCKNLGNTCYFNSGIQCIMHSLPLTRFLLGDEWRDDINETNPLGMKGKLVRQFAALT 236
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+ W A++P K +FAPQF+GY Q D EL+ F+LDG+HEDLNR + KP +E
Sbjct: 237 AREWLGEEIALSPDGLKSVTGQFAPQFAGYQQQDPHELIMFMLDGIHEDLNRCRTKPMVE 296
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
D E + E W NHK RNDS++VD+F GQ +S +CP C ++ FDP++ ++L
Sbjct: 297 QVIGDSTNDLETSREAWHNHKLRNDSIVVDLFHGQLRSRCICPQCGLTTVVFDPYVAISL 356
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILAL 539
P+ + + + + TV + ++ KD A+
Sbjct: 357 PISPPNQKVVDILFIPYDMQTAHKWLTVKVPRNASVKDYEDAV 399
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R++ ++L C F EE L ++ W+CP C+EH A KK+D+W P +LV LKRF +
Sbjct: 1610 REQPVTLEQCFKYFKQEETLDEENTWFCPHCREHVMANKKMDIWSCPKLLVLQLKRFETT 1669
Query: 819 RYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKV 875
K D V FP + LD+ ++ +S VY L+ +S H+G L GGH TA A V
Sbjct: 1670 ETGSVKDDRLVKFPNI-LDMKDHIVGPKPKSTVYKLYGVSEHFGSLTGGHCTAKATV 1725
>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
Length = 1213
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 127/194 (65%), Gaps = 17/194 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
GL GL+N+GNTC+MNS +QCL T LA++F G Y IN +NP+G G LA A G+L+
Sbjct: 787 GLTGLKNMGNTCYMNSTIQCLSATIPLARFFKDGSYRRAINRQNPMGTQGVLADAVGELI 846
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY-I 435
+ LW+ VAP +F+ + RFAPQF G +QHDSQE LAFLLDGLHEDLN V +KP +
Sbjct: 847 KVLWTETYNFVAPVSFRDAICRFAPQFRGTDQHDSQEFLAFLLDGLHEDLNFVVKKPRPV 906
Query: 436 EMKDSGGRPDEEVANEC----------WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
EM P+ E A E W+ + RN+S+IV+ FQGQY++ L C C K S
Sbjct: 907 EMT-----PEREAALESLPTQVASEKEWQIYTRRNNSVIVNWFQGQYRNRLQCLTCGKTS 961
Query: 486 ITFDPFMYLTLPLP 499
T+D FMYL+LPLP
Sbjct: 962 TTYDTFMYLSLPLP 975
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 21/140 (15%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K+R E +SL CLDAF+ EE L + W CP+CK R+ATK+L L LP +L+ H KRFS
Sbjct: 977 KSRSE-VSLQQCLDAFVKEEVLEKSEAWNCPRCKTRRKATKRLTLSRLPPILLIHFKRFS 1035
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYM--------------------KSKDGESYVYDLFA 856
+ +LDT V +P+ +LDL+ Y+ + SY YDL+A
Sbjct: 1036 FKGPFSERLDTVVRYPLSSLDLTNYLPPPLPPATANLYNVKPETVGPTASSSSYRYDLYA 1095
Query: 857 ISNHYGGLGGGHYTAYAKVN 876
+SNH+G L GHYTA+ K N
Sbjct: 1096 VSNHFGSLSSGHYTAFVKNN 1115
>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
intestinalis]
Length = 1094
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 1/188 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G+ GL GL+NLGN+C+MNS LQC+ + LA+Y L D Y+ ++N N +G G +A +F
Sbjct: 753 GKGRGLCGLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANKIGHGGRVAESF 812
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
LLR +WSS + P FK + F+GY Q DSQE L LLDGLHEDLN+ Q
Sbjct: 813 SVLLRAVWSSKYEYIVPSDFKSIIGTINSSFAGYTQEDSQEFLMLLLDGLHEDLNKAPQS 872
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
Y E D+ DEE A WK HK RN+S+IV++ +GQ+K+T+ C C K S FDPFM
Sbjct: 873 EYKEEPDNDALDDEEAAQMAWKYHKKRNESIIVELLKGQFKATVKCLHCGKASRKFDPFM 932
Query: 493 YLTLPLPS 500
YL+LPLP+
Sbjct: 933 YLSLPLPN 940
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 737 YDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQAT 796
+DP LP+ +K+ S++ L +F E + D W+CP CK R A
Sbjct: 928 FDPFMYLSLPLPNKSA-----------SIYDILKSFQRVEQMTGSDRWHCPNCKTLRDAV 976
Query: 797 KKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFA 856
+ +++W LP VL+ H KRF ++ ++K+ T +++P+ LDL+ ++ K Y+LFA
Sbjct: 977 RSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPMTQLDLTPFISGKQRRPK-YNLFA 1035
Query: 857 ISNHYG-GLGGGHYTAYAK 874
+S+H G GL GHYTA K
Sbjct: 1036 VSHHQGAGLDSGHYTASCK 1054
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
S N G L GL+NLGNTC+MNS LQCL +TP LA+YF + Y +IN N LG
Sbjct: 710 SLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSNLLGHK 769
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE+A FG +++ LW+ ++P+ FK + + QF+GY+ DSQELL FL+DGLHED
Sbjct: 770 GEVAEEFGCIMKALWTGQYKCISPKDFKITIGKINEQFAGYSHQDSQELLLFLMDGLHED 829
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LN+ + + +++ D + A+ W HK N+S+IV +FQGQ+KST+ C C K S
Sbjct: 830 LNKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVSLFQGQFKSTVQCLTCQKKS 889
Query: 486 ITFDPFMYLTLPLPST 501
TF+ FMYL+LPLPST
Sbjct: 890 RTFEAFMYLSLPLPST 905
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL C+ AF EE L + + C CK R ATKK+++W LP +L+ HLKRFS+ +
Sbjct: 909 SLKDCIKAFAKEEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEGRWRQ 968
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL +V+FP+ +LDLS Y+ S Y+LF +SNHYGGL GGHYTAY K
Sbjct: 969 KLQAYVDFPLESLDLSPYVIGPKS-SKKYNLFGVSNHYGGLDGGHYTAYCK 1018
>gi|71022651|ref|XP_761555.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
gi|46101424|gb|EAK86657.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
Length = 1198
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 123/192 (64%), Gaps = 7/192 (3%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
K GL GL+NLGN+C+MNS LQCL T LA++ L G Y IN NPLG G+LA A
Sbjct: 838 KIGLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKTAINRTNPLGTQGQLATALAG 897
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP- 433
L+ +W A V+P F+ +ARFAP F GY+QHDSQE LA LLDGLHEDLN V +P
Sbjct: 898 LVHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVTTRPA 957
Query: 434 YIEMKDSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
IEM + P + + + W ++ RNDSL+VD FQGQ+++ L C C K S T+
Sbjct: 958 AIEMTPARENELETLPQQIASIKEWGIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTY 1017
Query: 489 DPFMYLTLPLPS 500
+ F YL+LP+PS
Sbjct: 1018 EAFTYLSLPVPS 1029
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 17/129 (13%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
++L CLDAF+ EE L DMW C +CK R+ATK+L + LP VL+ HLKRFS+
Sbjct: 1036 VALQQCLDAFVREEVLDKGDMWNCSRCKRPRKATKRLSISRLPRVLLIHLKRFSFKGPFT 1095
Query: 823 NKLDTFVNFPI-LNLDLSKYMKS----------------KDGESYVYDLFAISNHYGGLG 865
+K+DT V FP+ LDL+ YM Y+YDL+A ++H+G L
Sbjct: 1096 DKIDTTVTFPVNTALDLTNYMPPPLPPGAAAAAGVKESLSQQPPYLYDLYAATHHFGSLN 1155
Query: 866 GGHYTAYAK 874
GHYTA K
Sbjct: 1156 TGHYTATVK 1164
>gi|340373937|ref|XP_003385496.1| PREDICTED: hypothetical protein LOC100638383 [Amphimedon
queenslandica]
Length = 1278
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
GL GL+NLGNTCFM+S +QCL TP L +YF G Y ++N NPLG G LA F L+
Sbjct: 943 GLTGLRNLGNTCFMSSVIQCLCATPPLVKYFFNGQYRADLNRSNPLGSGGILAEEFYILV 1002
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+W +AP FK +++ AP F+G QHDSQE L +LLDGLHEDLN+V K Y+E
Sbjct: 1003 AAIWLGKFRYIAPLEFKNTVSQVAPYFAGNEQHDSQEFLVYLLDGLHEDLNKVLVKSYVE 1062
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+ D+ G PD + W+ HK RN+S+I+D+F G KST+ C C K + F+PF+ L++
Sbjct: 1063 LPDTDGVPDPVAVEQAWQAHKKRNNSIIIDLFHGLLKSTITCLSCGKKKVMFEPFVSLSV 1122
Query: 497 PLP 499
P+P
Sbjct: 1123 PIP 1125
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
S C F +E + + W+CPQCK R + K L +W LP +L+ H KRF ++
Sbjct: 1132 SYHDCFKLFTAKERMTGTNKWFCPQCKASRDSEKTLFIWRLPPILLLHFKRFQDKGTVRE 1191
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTA 871
KL T ++FPI +LDL+ Y+ + Y L+AISNH G L GHYTA
Sbjct: 1192 KLSTSISFPIESLDLNSYVVGPR-PTNQYSLYAISNHTGSLQSGHYTA 1238
>gi|297846186|ref|XP_002890974.1| hypothetical protein ARALYDRAFT_336304 [Arabidopsis lyrata subsp.
lyrata]
gi|297336816|gb|EFH67233.1| hypothetical protein ARALYDRAFT_336304 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 173/327 (52%), Gaps = 58/327 (17%)
Query: 414 LLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYK 473
+L+ LLDGLH+DLN+++Q+ YIE K S G EVA E WKN+K + DSLIVD F GQ
Sbjct: 1 MLSSLLDGLHKDLNKLQQETYIEAKYSEGLLINEVAVEAWKNYKDQIDSLIVDAFHGQSS 60
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCK 533
ST++C C K S FDPF L LPL R++ VTVF NGS LP+P+TV + K+G
Sbjct: 61 STMICQDCGKTSFKFDPFKSLLLPLVG--FRSIMVTVFDGNGSNLPIPYTVIVAKNGVFN 118
Query: 534 DLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK 593
DL A+S C L E L L++V ++ +F NP +L+S+I+D +++V YRF+ G+
Sbjct: 119 DLSKAISDVCLLNSQERLELSQVDEYK--SYFVNPLDLLSTIEDTDYLVGYRFNLVNKGR 176
Query: 594 --IKLEIVNRWQEKSASDYLKGSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRT 651
KLE+ + +E + + Y L++E LSG DID V L+SPLRR
Sbjct: 177 ELFKLEVYHG-EEDTCNTYT---------------LQKETLSGIDIDACVKILMSPLRR- 219
Query: 652 YSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCKPI 711
G ++ LP SF L L D R SS +P+
Sbjct: 220 --------GHDDSELP---------------------------SFSLLLADFRASSFEPL 244
Query: 712 QKDSILKPGKHIKVLLDWTDDVHELYD 738
+ S++ P KV L W V + D
Sbjct: 245 ESYSLVTPSAVTKVFLKWNQKVGDFED 271
>gi|361127959|gb|EHK99914.1| putative ubiquitin carboxyl-terminal hydrolase 12 [Glarea
lozoyensis 74030]
Length = 1172
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 154/275 (56%), Gaps = 17/275 (6%)
Query: 326 GNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSG- 383
GN + C+ +L +YFL G E+N +NPLG HG +ALA+ LL +++
Sbjct: 282 GNGRELVEQRDCVRSVEELTKYFLSGTAKKELNYDNPLGNHGNVALAYQRLLEEMYKEPV 341
Query: 384 RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSG-- 441
A+ APR FK + ++AP FSGY Q DSQE L FLLDGL EDL+RVK+KPYIE DS
Sbjct: 342 PASTAPRQFKTTIGKYAPSFSGYGQQDSQEFLGFLLDGLQEDLSRVKKKPYIEKPDSTDE 401
Query: 442 --GRPD--EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLP 497
PD E+A + W+ K R+DS+I D+F G YKSTLVCP CSKVSITFDPF LTL
Sbjct: 402 MINNPDLIREMAAKVWEITKLRDDSVIADLFTGMYKSTLVCPECSKVSITFDPFNNLTLQ 461
Query: 498 LPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI---DEGLLLA 554
LP + + FY + P+ ++ + K G I A+ ++ E L A
Sbjct: 462 LP--IENSWQHNAFYFPLNDPPVTISIDMDKQGT----IFAMKQFISKRVGVPPERLFAA 515
Query: 555 EVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRK 589
E + + ++ F++ I ++ +V Y + K
Sbjct: 516 EEFKSKFYKIFKDKQVASEEISSNDVLVVYEIEDK 550
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 103/166 (62%), Gaps = 16/166 (9%)
Query: 725 VLLDWTDDVHE-LYDPS---------YIKDLPVVHKTGFTVKKT-----RQEAISLFSCL 769
+++DW D E L+D + +P + KK R+ I+L CL
Sbjct: 861 IVVDWHPDAWEALFDGTPGDTMRGCDTTSSIPTLPDPELEAKKAARQTRRKNGITLEDCL 920
Query: 770 DAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFV 829
+ F EE L D WYCP+CKEHR+A+KK +LW PD+L+ HLKRFS S ++KLD V
Sbjct: 921 NEFGKEEILSEMDTWYCPRCKEHRRASKKFELWRTPDILIMHLKRFSSSAMRRDKLDVMV 980
Query: 830 NFPILNLDL-SKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
NFP+ LDL S+ ++++DG+ +YDL A+ +H+GGLGGGHYTA+AK
Sbjct: 981 NFPVEGLDLTSRVIETQDGKQEIYDLIAVDDHWGGLGGGHYTAFAK 1026
>gi|351710270|gb|EHB13189.1| Ubiquitin carboxyl-terminal hydrolase 31, partial [Heterocephalus
glaber]
Length = 1188
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 242/593 (40%), Gaps = 129/593 (21%)
Query: 365 HGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
GE+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HE
Sbjct: 20 QGEVTEQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQHDAQEFLLWLLDRVHE 79
Query: 425 DLNRV----KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
DLN Q P ++ P+ C + + ++FQ QY+S+L CP
Sbjct: 80 DLNHAVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPH 131
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALS 540
C K S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 132 CQKQSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVS 191
Query: 541 TACCLKIDEGLL-----------------LAEVYNHQIFRFFENP----AELISSIKD-- 577
+ D+ +L L V+ FE P E I S +
Sbjct: 192 METKIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIH 251
Query: 578 ------------DEHIV--AYRFDRKQGG-----------KIKLEIVNRWQEKSASDYLK 612
D H + A + KQG KI L + NR
Sbjct: 252 LNNNLNHLKFGLDHHRLSSATQTTAKQGKMDQPTTRAGSDKIVLLVCNR--------ACT 303
Query: 613 GSERKLFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGFL-PEVID 671
G + K FG P V +LE+ D+ ++L ++ FL P V
Sbjct: 304 GQQGKRFGLPFVLHLEKT----IAWDLLQKEILEKMKY--------------FLRPTVCI 345
Query: 672 ELSNSHNESVETAELEDLCSRELSFQLSLTDER-ISSCKPIQKDSILKPGKHIKVLLDWT 730
++ V + L +E T ER + SC P H+K++++W
Sbjct: 346 QVCPFSLRVVSVVGITYLLPQEEQPLCHPTVERALKSCGPGGT-------AHVKLVVEWD 398
Query: 731 DDVHELY----DPSYIKDLPVVHKTGFTVKKTRQ---EAISLFSCLDAFLTEEPLGPDDM 783
+ + + YI D V ++K R + +L C + EE L PDD
Sbjct: 399 KETKDFLFVNTEDEYIPDSESVR-----LQKERHHQPQTCTLSQCFQLYTKEERLAPDDA 453
Query: 784 WYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLS---- 839
W CP CK+ +Q + L LW LPDVL+ HLKRF + KL V FP+ LD++
Sbjct: 454 WRCPHCKQLQQGSITLSLWTLPDVLIIHLKRFRQEGDKRMKLQNMVKFPLTGLDMTPHVV 513
Query: 840 ------------------KYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y +D E Y+YDL+A+ NH+G + GGHYTAY K
Sbjct: 514 KRSQSSWSLPSHWSPWRRPYGLGRDPEDYIYDLYAVCNHHGTMQGGHYTAYCK 566
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL +TP LA YF + Y D+IN N LG GE+A F
Sbjct: 738 GSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 797
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 798 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 857
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 858 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 917
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 918 YLSLPLASTSKCTL 931
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 930 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 989
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 990 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1043
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS-DEINTENPLGMH 365
S N G L GL+NLGNTC+MNS LQCL +TP +A+YF +Y ++IN N LG
Sbjct: 729 SLNPTFGGMGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYLEDINRSNILGHK 788
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE A FG +++ LW+ ++PR FK + + QF+GY+Q DSQELL FL+DGLHED
Sbjct: 789 GEFAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAGYDQQDSQELLLFLMDGLHED 848
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LN+ K + +++ D+ A+ W HK N+S+IV +FQGQ+KST+ C C + S
Sbjct: 849 LNKADNKKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQGQFKSTVQCSTCHRKS 908
Query: 486 ITFDPFMYLTLPLPST 501
TF+ FMYL+LPL ST
Sbjct: 909 RTFETFMYLSLPLAST 924
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL CL F EE L ++ +C CK HR +TKKL++W +P +L+ HLKRFSY K
Sbjct: 928 SLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQ 987
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ NLDL++Y+ Y L+ +SNHYGGL GGHYTAY K
Sbjct: 988 KLQTTVDFPLDNLDLTQYVIGPKQTLKRYYLYGVSNHYGGLDGGHYTAYCK 1038
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL +TP LA YF + Y D+IN N LG GE+A F
Sbjct: 739 GSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 798
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 799 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 858
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 859 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 918
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 919 YLSLPLASTSKCTL 932
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 931 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 990
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 991 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1044
>gi|242068361|ref|XP_002449457.1| hypothetical protein SORBIDRAFT_05g013830 [Sorghum bicolor]
gi|241935300|gb|EES08445.1| hypothetical protein SORBIDRAFT_05g013830 [Sorghum bicolor]
Length = 276
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 696 FQLSLTDERISSCKPIQK--DSILKPGKHIKVL--LDWTDDVHELYDPSYIKDLPVVHKT 751
FQL L D+ S I+K D+I P + + ++W + + D +++ LP V
Sbjct: 34 FQLQLIDD---SNTVIEKSNDAIRVPQSSLATVFFINWLKEDLKKIDTHHLEYLPEVFMY 90
Query: 752 GFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFH 811
G K+TR EA+SL++CLDAFL EEPL P+DMWYCP+CKE RQA+KKLDLW LP+VLV H
Sbjct: 91 GPPAKRTRGEALSLYACLDAFLREEPLVPEDMWYCPRCKEQRQASKKLDLWRLPEVLVIH 150
Query: 812 LKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKS-KDGESYVYDLFAISNHYGGLGGGHYT 870
LKRFS+SR K KL+TFVNFPI +LDL+ Y+ + K E +Y+L+A+SNHYG + GHYT
Sbjct: 151 LKRFSFSRSTKQKLETFVNFPIHDLDLTNYIANKKSSERQIYELYAVSNHYGNMASGHYT 210
Query: 871 AYAKV 875
A+ K+
Sbjct: 211 AHIKL 215
>gi|443913588|gb|ELU36169.1| ubiquitin-specific protease [Rhizoctonia solani AG-1 IA]
Length = 337
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 130/223 (58%), Gaps = 48/223 (21%)
Query: 320 AGLQNLG-NTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLR 377
A L + G NTC MNSALQCL H P+L +YFL G Y E+N +NPLGM G++A FG+
Sbjct: 18 ANLSHSGSNTCVMNSALQCLTHIPELEEYFLSGLYKQELNYDNPLGMQGQIANVFGN--- 74
Query: 378 KLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI-- 435
+ APR FK L +FAP FSGY QHD+Q+ L FLL GLH+DLNRV + PY+
Sbjct: 75 -----STNSYAPREFKHTLGKFAPAFSGYQQHDTQQFLGFLLGGLHKDLNRVLKNPYVKK 129
Query: 436 -EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV---------- 484
E + GG ++ VA E W+ +K RN S+IVD+FQ YKSTLV P CSKV
Sbjct: 130 PEWPEEGGN-EKAVAKETWEGYKKRNKSIIVDLFQSMYKSTLVYPECSKVSLTILPRVVC 188
Query: 485 ------------------------SITFDPFMYLTLPLPSTVT 503
SITFDPFMYLTLPLP T T
Sbjct: 189 SCIRLDNDLCTSLLKVLIAFLVQISITFDPFMYLTLPLPVTKT 231
>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
rubripes]
Length = 1082
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 127/196 (64%), Gaps = 1/196 (0%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMH 365
S N + G L GL+NLGNTC+MNS LQCL + P L +YF +Y D+IN N LG
Sbjct: 737 SLNPSFGGLGASLTGLRNLGNTCYMNSVLQCLCNAPALTEYFNNNYYMDDINRSNILGHK 796
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
G++A FG +++ LWS ++PR FK + + QFSGY Q DSQELL FL+DGLHED
Sbjct: 797 GDVAEEFGVIMKALWSGLYKCISPRDFKITIGKINEQFSGYEQQDSQELLLFLMDGLHED 856
Query: 426 LNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVS 485
LN+ + + +++ D+ A+ W+ HK N+S+IV +FQGQ+KST+ C C + S
Sbjct: 857 LNKADNRKRYKEEENDHLDDQTAADVAWRKHKLLNESIIVALFQGQFKSTVQCLTCHRKS 916
Query: 486 ITFDPFMYLTLPLPST 501
TF+ FMYL+LPL ST
Sbjct: 917 RTFETFMYLSLPLAST 932
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL CL F EE L ++ +C CK HR +TKKL++W +P +L+ HLKRFSY K
Sbjct: 936 SLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQ 995
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ +LDL++Y+ Y L+A+SNHYGGL GGHYTAY K
Sbjct: 996 KLQTSVDFPLDSLDLAQYVIGPKQSLKRYSLYAVSNHYGGLDGGHYTAYCK 1046
>gi|118367493|ref|XP_001016960.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298727|gb|EAR96715.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1170
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 126/222 (56%), Gaps = 22/222 (9%)
Query: 300 DMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
D+ YN + GL G+ NLGNTCF+NSALQCL++ L YFL D ++ E+NT
Sbjct: 54 DIHQSKQRYNELTDQDPLGLVGISNLGNTCFINSALQCLLNVQPLMDYFLSDLHNQEVNT 113
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
NPLG G++ AF DL+ +W + P+ F + +F+ F +Q DSQE L FL
Sbjct: 114 NNPLGSKGKVTYAFADLVNMIWCQNNKYIVPKVFLNTIQQFSAIFGDGSQQDSQEFLIFL 173
Query: 419 LDGLHE---------------------DLNRVKQKPYIEMKDSGGRPDEEVANECWKNHK 457
LD LHE DLNRVK+KP IE KD E A E WKN+
Sbjct: 174 LDLLHEVKKQRLFKLIVSATSIFLYKKDLNRVKKKPAIEDKDYQSDQYETYAAESWKNYL 233
Query: 458 ARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
RN S++VD+FQGQ KSTL C VC VS FD FMYL++P+P
Sbjct: 234 LRNKSIVVDLFQGQLKSTLKCLVCETVSHKFDTFMYLSVPIP 275
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 42/154 (27%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
IS+ C++ F EE L + W C CK+ +TKK+DLW P++L+ HLKRFS+++ +
Sbjct: 286 ISIEDCIEEFTKEEKLDKSEWWLCTSCKKRTPSTKKIDLWKTPNILIIHLKRFSFTKENR 345
Query: 823 NKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI------------------------- 857
K++ F++F I DLS+ + K+ +YDLF++
Sbjct: 346 GKINKFIDFKITQFDLSQKVSGKEKMRPIYDLFSVCFKLDNTQANVYLIGTISKNKVLKL 405
Query: 858 -----------------SNHYGGLGGGHYTAYAK 874
NH G LGGGHYTAYAK
Sbjct: 406 LYIKITIKNILTLQFVKQNHSGNLGGGHYTAYAK 439
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL +TP LA YF + Y D+IN N LG GE+A F
Sbjct: 662 GSGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 721
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 722 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 781
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 782 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 841
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 842 YLSLPLASTSKCTL 855
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 854 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 913
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 914 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 967
>gi|224007525|ref|XP_002292722.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971584|gb|EED89918.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2129
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 137/245 (55%), Gaps = 22/245 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
G+ GL N+GNTC++NS++QCL HTP L YF Y +INT NP+G G LA AF L+
Sbjct: 1336 GIVGLYNMGNTCYLNSSVQCLSHTPILRDYFTSKAYLRDINTTNPMGHQGRLAQAFAVLV 1395
Query: 377 RKLWSSG---------------------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
LW ++ P++FK + + F G QHD+QELL
Sbjct: 1396 NNLWKKSDDRNGPLKKINPNTASASPLNAPSLTPKSFKEAIGKSNDIFVGNEQHDAQELL 1455
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLL G+ EDLNR+ +KPYIE+ DS GRPD E+A+ W H R S+I +F GQYKS+
Sbjct: 1456 AFLLSGMSEDLNRITEKPYIELPDSDGRPDAELADIWWAIHMKRELSIIEALFAGQYKSS 1515
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
L C +C S F+ F YL LPLP ++ ++ S M ++V + G D+
Sbjct: 1516 LTCKICKYESARFESFSYLQLPLPEDDHVSIQCVLYPIQESKDIMKYSVRVRHDGSVNDV 1575
Query: 536 ILALS 540
++AL+
Sbjct: 1576 LVALA 1580
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 39/149 (26%)
Query: 762 AISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYL 821
+I+L CLD+F EE + PD +C +C+E R TK+L++W P +++ HLKRF ++ +
Sbjct: 1909 SITLEECLDSFAEEEKI-PDT--FCSRCQELRVQTKRLNIWRFPPMVIIHLKRFQFTETM 1965
Query: 822 KNKLDTFVNFPILNLDLSKYM------KSKDGESY------------------------- 850
K KL V FPI LDLS+ + +SK Y
Sbjct: 1966 KRKLRDLVVFPIEGLDLSRIVAPSSEQESKTNGKYENGSGDANAVEFNGGSFHPLSHNNS 2025
Query: 851 -----VYDLFAISNHYGGLGGGHYTAYAK 874
+YDL+ + +H G + GGHY A K
Sbjct: 2026 GRTQSIYDLYGVVHHQGAMQGGHYVASLK 2054
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 19 PCTPDEERQIVQDLKNQ------------SDLDLKEGNLYFLISTRWYRSWERYVCGDEP 66
P + E+ I+ ++K + S G +++I+ W+R+W+ Y G
Sbjct: 1026 PASSSTEKHIIDEIKRRHKYRYPRTRDGSSQPRGPSGTAWYVINAEWWRTWKHYTEGKAG 1085
Query: 67 SIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVP 126
D + R+ IDN+ ++ SE L +++ L +D+ LV
Sbjct: 1086 DGD-------------AARSYVLSKIDNNMLL------SEQGILSLKQGLHWKRDFELVE 1126
Query: 127 QQVWEKLFCWYKGGPALPRKMI 148
VW L W+ GGP +PR ++
Sbjct: 1127 PLVWSALQAWWDGGPPIPRYVV 1148
>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Gallus gallus]
Length = 1125
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA+YF + Y D+IN N LG GE+A F
Sbjct: 778 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEF 837
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 838 GVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 897
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 898 KRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 957
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 958 YLSLPLASTSKCTL 971
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 970 TLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1029
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K
Sbjct: 1030 KLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCK 1080
>gi|403414636|emb|CCM01336.1| predicted protein [Fibroporia radiculosa]
Length = 1176
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 125/190 (65%), Gaps = 6/190 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G +GL+NLGNTC+MNS +QCL T A++F G + +N NP+G G LA AF ++L
Sbjct: 816 GTSGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKSAVNMMNPMGTKGNLAHAFANIL 875
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI- 435
R +W ++P F+ L ++APQF G QHDSQE L FLLDGLHEDLNRV QKP I
Sbjct: 876 RDMWQGELQCLSPVTFRRSLCQYAPQFGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQID 935
Query: 436 ---EMKDSGGRPDEEVANEC-WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
E + R ++A+E W+ + RNDSL+VD FQGQ+++ L C C K S T++ F
Sbjct: 936 STPEREAELERLPTQIASEQEWQIWRMRNDSLVVDFFQGQFRNRLECLTCHKTSTTYNTF 995
Query: 492 MYLTLPLPST 501
MYLTLP+P++
Sbjct: 996 MYLTLPIPTS 1005
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 18/128 (14%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+SL CLDAF+ EE + D W CP CK R+ATK L L LP VL+ HLKRFS +
Sbjct: 1011 VSLSHCLDAFVKEEVMEKSDAWNCPHCKTLRKATKNLSLSRLPPVLLIHLKRFSSKGHFT 1070
Query: 823 NKLDTFVNFPILNLDLSKYMKSK------------------DGESYVYDLFAISNHYGGL 864
+K++TFV++P+ LDL+ YM Y YDL+ ++NH+G L
Sbjct: 1071 DKIETFVDYPLRGLDLTNYMPPPLPPGVNAGPQMPRDDPRAQIPPYRYDLYGVTNHFGTL 1130
Query: 865 GGGHYTAY 872
GHYTA+
Sbjct: 1131 SSGHYTAF 1138
>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Gallus gallus]
Length = 1116
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA+YF + Y D+IN N LG GE+A F
Sbjct: 769 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEF 828
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 829 GVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 888
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 889 KRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 948
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 949 YLSLPLASTSKCTL 962
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 961 TLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1020
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K
Sbjct: 1021 KLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCK 1071
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GL NLGNTC++N+ALQCL +TP L YFL + EIN LG +G++ FG L+
Sbjct: 79 GLVGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHEKEINPNAFLGSNGQITSQFGKLI 138
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
LW + + + P F ++ +FA QF+ Q DS E LAFLLD LHEDLNRV +KPYI+
Sbjct: 139 LDLWQTDQNFIEPIDFINEIGQFAEQFADGTQQDSHEFLAFLLDILHEDLNRVIKKPYIK 198
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
KD EE + E WK + RN S+IVD+FQGQ KSTL C VC VS F+ F +L++
Sbjct: 199 EKDYNCEKHEEYSKESWKEYLMRNKSIIVDLFQGQTKSTLKCLVCGSVSHKFEAFQFLSV 258
Query: 497 PLPSTVTRTMTVTV 510
P+P+ + + +
Sbjct: 259 PVPANKSHNEIINL 272
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 82/121 (67%)
Query: 757 KTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFS 816
K+ E I+L C+ F EE L ++ WYC +CK++R++TK++DLW LP++L+ HLKRF
Sbjct: 264 KSHNEIINLSECIQEFTKEEYLDQNEWWYCFKCKKNRKSTKQIDLWKLPNILIIHLKRFR 323
Query: 817 YSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVN 876
+ + +K K+ FV+FPI N DL Y + + +YDLFAISNH G L GHYTAYAK
Sbjct: 324 FDKNIKAKIKNFVDFPIQNFDLQPYTIGRQRDQPIYDLFAISNHEGNLSSGHYTAYAKNR 383
Query: 877 A 877
A
Sbjct: 384 A 384
>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Sarcophilus harrisii]
Length = 1069
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 722 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEF 781
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QFSGY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 782 GIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNR 841
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 842 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 901
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 902 YLSLPLASTSKCTL 915
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 914 TLQDCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQ 973
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 974 KLQTSVDFPLENLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCKNAA 1027
>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
troglodytes]
gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
troglodytes]
gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
troglodytes]
gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
gorilla]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8 [Papio anubis]
Length = 1109
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 762 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 821
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 822 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 881
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 882 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 941
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 942 YLSLPLASTSKCTL 955
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 954 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1013
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1014 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1067
>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 773 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 832
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 833 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 892
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 893 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 952
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 953 YLSLPLASTSKCTL 966
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 965 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1024
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1025 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1078
>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
troglodytes]
Length = 1012
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 665 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 724
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 725 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 784
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 844
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 845 YLSLPLASTSKCTL 858
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 857 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 916
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 917 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 970
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
garnettii]
Length = 1087
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 740 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 799
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 800 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 859
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A + W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 860 KRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 919
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 920 YLSLPLASTSKCTL 933
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 932 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 991
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 992 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1045
>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
Length = 1012
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 665 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 724
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 725 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 784
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 844
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 845 YLSLPLASTSKCTL 858
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 857 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 916
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 917 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 970
>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Sarcophilus harrisii]
Length = 1100
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 753 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEF 812
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QFSGY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 813 GIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNR 872
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 873 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 932
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 933 YLSLPLASTSKCTL 946
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 945 TLQDCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1004
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1005 KLQTSVDFPLENLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCKNAA 1058
>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|343426659|emb|CBQ70188.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Sporisorium
reilianum SRZ2]
Length = 1184
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 121/191 (63%), Gaps = 7/191 (3%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
K GL GL+NLGN+C+MNS LQCL T LA++ L G Y IN NPLG G+LA A
Sbjct: 821 KIGLTGLKNLGNSCYMNSTLQCLSATTPLARFLLDGSYKQAINRTNPLGTQGQLATALAG 880
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP- 433
L+ +W A V+P F+ +ARFAP F GY+QHDSQE LA LLDGLHEDLN V +P
Sbjct: 881 LVHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTRPA 940
Query: 434 YIEMKDSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+EM P + + + W ++ RNDSL+VD FQGQ+++ L C C K S T+
Sbjct: 941 AVEMTPERENELETLPQQIASVKEWSIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTY 1000
Query: 489 DPFMYLTLPLP 499
+ F YL+LP+P
Sbjct: 1001 EAFTYLSLPVP 1011
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 86/150 (57%), Gaps = 25/150 (16%)
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
LPV H G V K ++L CLDAF+ EE L DMW CP+C++ R+ATK+L + L
Sbjct: 1008 LPVPHGRG--VGK-----VALQQCLDAFVREEVLDKADMWNCPRCRKPRKATKRLSISRL 1060
Query: 805 PDVLVFHLKRFSYSRYLKNKLDTFVNFPILN-LDLSKYMKS--------KDGE------- 848
P +L+ HLKRFS+ +K+DT V FP + LDL+ YM K G
Sbjct: 1061 PQILLIHLKRFSFKGPFTDKIDTTVTFPTNSALDLTNYMPPPLPPGTVVKGGNVAVSQSQ 1120
Query: 849 --SYVYDLFAISNHYGGLGGGHYTAYAKVN 876
Y+YDL+A+++H+G L GHYTA + N
Sbjct: 1121 VPPYLYDLYAVTHHFGSLNTGHYTATIRSN 1150
>gi|47230636|emb|CAF99829.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMH 365
S N + G L GL+NLGNTC+MNS LQCL +TP L +YF +Y D+IN N LG
Sbjct: 673 SLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPALTEYFNNNYYMDDINRSNILGHK 732
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE+A FG +++ LW+ ++PR FK + + QF+GY+Q DSQELL FL+DGLHED
Sbjct: 733 GEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHED 792
Query: 426 LNRV---KQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
LN+ +K Y E +++ D+ A++ W HK N+S+IV +FQGQ+KST+ C C
Sbjct: 793 LNKAPADNRKRYKE-EENDHLDDQTAADQAWSKHKLLNESIIVALFQGQFKSTVQCLTCH 851
Query: 483 KVSITFDPFMYLTLPLPST 501
+ S TF+ FMYL+LPL ST
Sbjct: 852 RKSRTFETFMYLSLPLAST 870
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR--------- 814
SL CL F EE L ++ +C CK HR +TKKL++W +P +L+ HLKR
Sbjct: 874 SLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRSVPLVLYAF 933
Query: 815 -----------------FSYSRYLKNKLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAI 857
FSY K KL T V+FP+ +LDL++Y+ Y L+ +
Sbjct: 934 VCVFFSCKNKISIFLCRFSYEGRWKQKLQTSVDFPLDSLDLAQYVIGPKHSLKRYSLYGV 993
Query: 858 SNHYGGLGGGHYTAYAK 874
SNHYGGL GGHYTAY K
Sbjct: 994 SNHYGGLDGGHYTAYCK 1010
>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1012
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 665 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 724
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 725 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 784
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 844
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 845 YLSLPLASTSKCTL 858
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 857 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 916
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 917 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 970
>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
lupus familiaris]
Length = 1116
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 769 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 828
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 829 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 888
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 889 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 948
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 949 YLSLPLASTSKCTL 962
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 961 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1020
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1021 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1074
>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
catus]
Length = 1087
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 740 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 799
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 800 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 859
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 860 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 919
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 920 YLSLPLASTSKCTL 933
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 932 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 991
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 992 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1045
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 770 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 829
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 830 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 889
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 890 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 949
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 950 YLSLPLASTSKCTL 963
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 962 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1021
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1022 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1075
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 665 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 724
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 725 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 784
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 844
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 845 YLSLPLASTSKCTL 858
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 857 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 916
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 917 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 970
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 769 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 828
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 829 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 888
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 889 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 948
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 949 YLSLPLASTSKCTL 962
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 961 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1020
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1021 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1074
>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Nomascus leucogenys]
gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Nomascus leucogenys]
gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Nomascus leucogenys]
Length = 1117
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 770 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 829
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 830 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 889
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 890 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 949
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 950 YLSLPLASTSKCTL 963
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 962 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1021
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1022 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1075
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA+YF + Y D+IN N LG GE+A F
Sbjct: 777 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSNFLGHKGEVAEEF 836
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 837 GVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 896
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 897 KRYKEENNDHLDDLRAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 956
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 957 YLSLPLASTSKCTL 970
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 969 TLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1028
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K
Sbjct: 1029 KLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCK 1079
>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
leucogenys]
Length = 1011
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 664 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 723
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 724 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 783
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 784 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 843
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 844 YLSLPLASTSKCTL 857
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 856 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 915
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 916 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 969
>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
domestica]
Length = 1102
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 755 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEF 814
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QFSGY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 815 GIIMKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNR 874
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 875 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 934
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 935 YLSLPLASTSKCTL 948
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 947 TLQDCLRLFSKEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1006
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ +LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1007 KLQTSVDFPLESLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCKNAA 1060
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 552 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 611
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 612 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 671
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 672 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 731
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 732 YLSLPLASTSKCTL 745
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 744 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 803
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 804 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 857
>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
familiaris]
Length = 1010
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 663 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 722
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 723 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 782
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 783 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 842
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 843 YLSLPLASTSKCTL 856
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 855 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 914
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 915 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 968
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus
rotundus]
Length = 1116
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 769 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 828
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 829 GIIMKALWTGQYRYISPKDFKTTIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 888
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 889 KRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAFM 948
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 949 YLSLPLASTSKCTL 962
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 961 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1020
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1021 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1074
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 664 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 723
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 724 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 783
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 784 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 843
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 844 YLSLPLASTSKCTL 857
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 856 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 915
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 916 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 969
>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
Length = 1088
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 741 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 800
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 801 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 860
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 861 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 920
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 921 YLSLPLASTSKCTL 934
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 933 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 992
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ +LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 993 KLQTSVDFPLESLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1046
>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora
B]
Length = 1166
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 16/195 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G +GL+NLGNTC+MNS +QCL T ++F G + + +N NPLG G LA AF +L
Sbjct: 806 GTSGLKNLGNTCYMNSTIQCLSATVPFTRFFTEGRWKNAVNMVNPLGTKGALAHAFASIL 865
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R++W + P F+ + +APQFSG QHDSQE L LLDGLHEDLNRV KP+ E
Sbjct: 866 REMWQGENQCLTPVTFRRSVCTYAPQFSGSEQHDSQEFLTSLLDGLHEDLNRVLHKPHTE 925
Query: 437 MKDSGGRPDEE---------VANEC-WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
P++E +A+E W+ ++ RNDSL+VD FQGQ+++ L C C K S
Sbjct: 926 PT-----PEQEAELERLPVQIASEREWQIYRMRNDSLVVDFFQGQFRNRLECLTCHKTST 980
Query: 487 TFDPFMYLTLPLPST 501
T++ FMYLTLP+PST
Sbjct: 981 TYNAFMYLTLPIPST 995
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 18/128 (14%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+SL CLDAF+ EE + D W CP CK R+ATK+L L LP VL+ HLKRFS
Sbjct: 1001 VSLQQCLDAFVKEEVMEKSDAWNCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFT 1060
Query: 823 NKLDTFVNFPILNLDLSKYMK-------------SKDG-----ESYVYDLFAISNHYGGL 864
+K++T V+FP+ LDL+ YM S+D Y YDL+A++NH+G L
Sbjct: 1061 DKVETVVDFPLRGLDLTNYMPPPLPPGVGGGPSISRDDPRCQMPPYRYDLYAVTNHFGTL 1120
Query: 865 GGGHYTAY 872
GGHYTA+
Sbjct: 1121 SGGHYTAF 1128
>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
catus]
Length = 1010
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 663 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 722
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 723 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 782
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 783 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 842
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 843 YLSLPLASTSKCTL 856
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 855 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 914
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 915 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 968
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL +TP LA+YF + Y ++IN N LG GE+A F
Sbjct: 744 GLGASLTGLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHNILGHKGEVAEEF 803
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++PR FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 804 GVIMKALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHEDLNKADNR 863
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D+ A+ W HK N+S+IV +FQGQ+KST+ C C + S TF+ FM
Sbjct: 864 KRYKEEENDHLDDQTGADLAWSKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFM 923
Query: 493 YLTLPLPST 501
YL+LPL ST
Sbjct: 924 YLSLPLAST 932
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL CL F EE L ++ +C CK HR +TKKL++W +P +L+ HLKRFSY K
Sbjct: 936 SLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQ 995
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDL++Y+ Y+L+ +SNHYGGL GGHYTAY K A
Sbjct: 996 KLQTSVDFPLDNLDLAQYVIGPKQSLKRYNLYGVSNHYGGLDGGHYTAYCKNAA 1049
>gi|397567796|gb|EJK45783.1| hypothetical protein THAOC_35581 [Thalassiosira oceanica]
Length = 578
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGN+C+MNS LQC+ + YFL GDY E+N NPLG G +A A+G L
Sbjct: 198 GTVGLHNLGNSCYMNSILQCINQIKPITGYFLEGDYQKELNKANPLGSGGRVATAYGSFL 257
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
+W + VAPR K ++ FA QF+ QHDSQE +L+DGLHEDLNRV++KPY+E
Sbjct: 258 NDIWGGEYSVVAPRILKQTVSMFAQQFNNNYQHDSQEFCQYLMDGLHEDLNRVREKPYVE 317
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
++ G D + A E W+ H R+DS+ VD QG ++S L CP C K SI FD + ++L
Sbjct: 318 AVEAFGMEDGKAAVESWRKHLLRHDSIFVDYTQGMHRSHLTCPACGKESIKFDVYSSISL 377
Query: 497 PL 498
P+
Sbjct: 378 PI 379
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 86/177 (48%), Gaps = 29/177 (16%)
Query: 721 KHIKVLLDWTDDVH--ELYDPSYIKD-----------LPVVHKTGFTVKKTRQEAISLFS 767
+H + +D+T +H L P+ K+ LP+V K ++ L +
Sbjct: 340 RHDSIFVDYTQGMHRSHLTCPACGKESIKFDVYSSISLPIV------PAKEGSSSVPLKA 393
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY-------SRY 820
CLD F E L + WYCP CK H A K + LW PDV+V H+KRF++ +
Sbjct: 394 CLDQFAVGEQLDEHNAWYCPSCKRHVCALKHIQLWNTPDVIVLHMKRFTFEKCPDEDGKI 453
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSKDGESY--VYDLFAISNHYGGLG-GGHYTAYAK 874
++ K++ V+FPI LDLS Y+ E VY LF +S H G GHYTA +
Sbjct: 454 IRRKIEETVDFPIDRLDLSPYVYGPKYEDAPPVYRLFGVSEHTGATANSGHYTATVR 510
>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1114
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 6/186 (3%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
+GL+NLGNTC+MNS +QCL T A++F G + + +N NPLG G LALAF ++L +
Sbjct: 750 SGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPLGTKGNLALAFSNILYE 809
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+ S + P AF+ + APQFSG QHDSQE L+FLLDGLHEDLNRV QKP+ E+
Sbjct: 810 MAHSELPHLTPNAFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPHYEVT 869
Query: 439 DSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P + + + W ++ RNDSL+VD FQGQ+++ + C C K S T++ FMY
Sbjct: 870 PEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYNTFMY 929
Query: 494 LTLPLP 499
LTLP+P
Sbjct: 930 LTLPIP 935
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 24/134 (17%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWY--CPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRY 820
+SL SCLDAF+ EE L D WY CP CK R+ATK+L L LP +L+ HLKRFS+
Sbjct: 943 VSLQSCLDAFVKEEILENTDAWYVHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGP 1002
Query: 821 LKNKLDTFVNFPILNLDLSKYMKSK----------------------DGESYVYDLFAIS 858
+K++T V+FP+ LDL+ YM Y YDL+ ++
Sbjct: 1003 FTDKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVT 1062
Query: 859 NHYGGLGGGHYTAY 872
NH+G L GGHYTA+
Sbjct: 1063 NHFGTLSGGHYTAF 1076
>gi|443897977|dbj|GAC75315.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1070
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 122/191 (63%), Gaps = 7/191 (3%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGD 374
K GL GL+NLGN+C+MNS LQCL T LA++ L G Y IN NPLG G+LA+A
Sbjct: 713 KIGLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKQAINRTNPLGTQGQLAMALAG 772
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKP- 433
L+ +W A V+P F+ +ARFAP F GY+QHDSQE LA LLDGLHEDLN V +P
Sbjct: 773 LIHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTRPA 832
Query: 434 YIEMKDSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITF 488
+EM P + + + W ++ RNDSL+VD FQGQ+++ L C C K S T+
Sbjct: 833 AVEMTPEREAQLETLPQQVASVKEWAIYRMRNDSLVVDWFQGQFRNKLTCLTCGKTSTTY 892
Query: 489 DPFMYLTLPLP 499
+ + YL+LP+P
Sbjct: 893 EAYTYLSLPVP 903
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 85/158 (53%), Gaps = 23/158 (14%)
Query: 730 TDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQC 789
T +E Y +Y+ LPV H G V K +SL CLDAF+ EE L DMW CP+C
Sbjct: 888 TSTTYEAY--TYLS-LPVPHGRG--VGK-----VSLEQCLDAFVREEVLDKADMWNCPRC 937
Query: 790 KEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLD-TFVNFPILNLDLSKYMKS---- 844
+ R+ATK+L + LP +L+ HLKRFS+ +K+D T +DL+ YM +
Sbjct: 938 NKPRKATKRLSISRLPQILLIHLKRFSFKGPFTDKIDTTVTFPTTTPMDLTNYMPAPLPP 997
Query: 845 --------KDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
Y YDL+A+++H+G L GHYTA K
Sbjct: 998 GSGQVESGSQRPPYRYDLYAVTHHFGSLNTGHYTATVK 1035
>gi|298714959|emb|CBJ33989.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 323
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 125/184 (67%), Gaps = 4/184 (2%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLLRK 378
AGLQNLGNTCFMNSALQCL + LA YFLG D+ EIN N LG G +A AFG L
Sbjct: 24 AGLQNLGNTCFMNSALQCLFNCEALADYFLGFDWKREINRGNFLGHKGLMASAFGSLAND 83
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV--KQKPYIE 436
+W S +A++ P FK ++ P F+GY Q D QE LAFLLD +HEDLNRV + Y+E
Sbjct: 84 MWRSDKASLRPGDFKTQVGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPNADRKYVE 143
Query: 437 MKDSGGRPDEE-VANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
K++ EE VA + WK + RN S+IVD+FQGQ +S L C VC + S+TFDPFMYL+
Sbjct: 144 AKEAKEGEAEEMVAMQAWKGYLERNRSIIVDLFQGQLRSALQCSVCGRRSVTFDPFMYLS 203
Query: 496 LPLP 499
+PLP
Sbjct: 204 VPLP 207
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
ISL +C+ F EE L D+ WYC CK+H++ATKKLDLW +P VL+ HLKRF+ S
Sbjct: 236 ISLEACIRMFCEEEVLDGDNAWYCSNCKKHQRATKKLDLWKVPPVLIVHLKRFAGS---- 291
Query: 823 NKLDTFVNFPILNLDLSKYMKS 844
+K+ + V FP+ LDLS+ +KS
Sbjct: 292 SKISSLVTFPLEGLDLSEVVKS 313
>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1030
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 6/186 (3%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
+GL+NLGNTC+MNS +QCL T A++F G + + +N NPLG G LALAF ++L +
Sbjct: 668 SGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPLGTKGNLALAFSNILYE 727
Query: 379 LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMK 438
+ S + P AF+ + APQFSG QHDSQE L+FLLDGLHEDLNRV QKP+ E+
Sbjct: 728 MAHSELPHLTPNAFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPHYEVT 787
Query: 439 DSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P + + + W ++ RNDSL+VD FQGQ+++ + C C K S T++ FMY
Sbjct: 788 PEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYNTFMY 847
Query: 494 LTLPLP 499
LTLP+P
Sbjct: 848 LTLPIP 853
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 22/132 (16%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+SL SCLDAF+ EE L D W+CP CK R+ATK+L L LP +L+ HLKRFS+
Sbjct: 861 VSLQSCLDAFVKEEILENTDAWHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGPFT 920
Query: 823 NKLDTFVNFPILNLDLSKYMKSK----------------------DGESYVYDLFAISNH 860
+K++T V+FP+ LDL+ YM Y YDL+ ++NH
Sbjct: 921 DKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVTNH 980
Query: 861 YGGLGGGHYTAY 872
+G L GGHYTA+
Sbjct: 981 FGTLSGGHYTAF 992
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 6/189 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G +GL+NLGNTC+MNS +QCL T +++F G + +N NP+G G LALAF ++L
Sbjct: 842 GTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANIL 901
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R +W ++P F+ + APQFSG QHDSQE L+FLLDGLHEDLNR+ QK IE
Sbjct: 902 RDMWQGEGGTLSPVTFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRILQKRNIE 961
Query: 437 MKDSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
P + + + W+ ++ R+DSLIVD FQGQY++ + C C K S T++ F
Sbjct: 962 STPEREAELEKLPTQIASEQEWQIYRMRDDSLIVDFFQGQYRNRMECLTCHKTSTTYNTF 1021
Query: 492 MYLTLPLPS 500
MYLTLP+P+
Sbjct: 1022 MYLTLPIPT 1030
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 18/136 (13%)
Query: 755 VKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKR 814
+ R ++L C+DAF+ EE + D W CP CK R+ATK+L L LP VL+ HLKR
Sbjct: 1028 IPTGRASKVTLQHCIDAFVKEEVMEKSDAWNCPHCKALRKATKQLSLSRLPPVLLIHLKR 1087
Query: 815 FSYSRYLKNKLDTFVNFPILNLDLSKYMK-------------SKDG-----ESYVYDLFA 856
FS +K++TFV FP+ LDL+ YM S D Y YDL+A
Sbjct: 1088 FSAKGPFTDKIETFVEFPLKGLDLTNYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYA 1147
Query: 857 ISNHYGGLGGGHYTAY 872
++NH+G L GHYTA+
Sbjct: 1148 VTNHFGTLSTGHYTAF 1163
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 218 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 277
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 278 GIIMKALWTGQYRYISPKDFKITVGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 337
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 338 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 397
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 398 YLSLPLASTSKCTL 411
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 410 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 469
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 470 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 523
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 47 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 106
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 107 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 166
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 167 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 226
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 227 YLSLPLASTSKCTL 240
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 239 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 298
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 299 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 352
>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
Length = 1026
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 118/188 (62%), Gaps = 6/188 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G +GL+NLGNTC+MNS +QCL T +++F G + +N NP+G G LA AF ++L
Sbjct: 667 GTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANIL 726
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R +W ++P F+ L +APQF G QHDSQE L FLLDGLHEDLNRV QKP IE
Sbjct: 727 RDMWQGEMQCLSPVTFRRSLCMYAPQFGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQIE 786
Query: 437 MKDSGGR-----PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
P + + W+ + RNDSL+VD FQGQ+++ L C C K S T++ F
Sbjct: 787 TTPEREAELERLPTQIAREQEWQIWRMRNDSLVVDFFQGQFRNRLECLTCHKTSTTYNTF 846
Query: 492 MYLTLPLP 499
MYLTLP+P
Sbjct: 847 MYLTLPIP 854
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 18/132 (13%)
Query: 759 RQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYS 818
R +SL+ CLDAF+ EE + D W CP CK R+ATK L L LP VL+ HLKRFS
Sbjct: 857 RGSKVSLYQCLDAFVKEEVMEKSDAWNCPHCKALRKATKNLSLSRLPPVLLIHLKRFSSK 916
Query: 819 RYLKNKLDTFVNFPILNLDLSKYM-------------KSKDG-----ESYVYDLFAISNH 860
+ +K++TFV++PI +LDL+ YM S+D Y YDL+ ++NH
Sbjct: 917 GHFTDKIETFVDYPIRSLDLTNYMPPPLPPGVDMGLQPSRDDPRAQVPPYRYDLYGVTNH 976
Query: 861 YGGLGGGHYTAY 872
+G L GHYTA+
Sbjct: 977 FGTLSSGHYTAF 988
>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
Length = 1118
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S F+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRAFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 963 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1022
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1023 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1076
>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
Length = 1110
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 763 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSNFLGHKGEVAEEF 822
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 823 GVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 882
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D A W HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 883 KRYKEENNDHLDDLRAAELAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 942
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 943 YLSLPLASTSKCTL 956
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 955 TLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1014
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K
Sbjct: 1015 KLQTSVDFPLETLDLSQYVIGPKNNLKRYNLFSVSNHYGGLDGGHYTAYCK 1065
>gi|334323386|ref|XP_003340388.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Monodelphis
domestica]
Length = 1100
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 160/622 (25%), Positives = 256/622 (41%), Gaps = 148/622 (23%)
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALA 371
K G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+
Sbjct: 98 KARPPGTQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGHYQA-------WPGRAEVTEQ 150
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
L+R LW+ Y H S E
Sbjct: 151 LAGLVRSLWTQD----------------------YTPHLSVEF----------------- 171
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
KP E P + + N ++ S + + FQ QY+S+L CP C K S TFDPF
Sbjct: 172 KPQPE-------PSKNLVQTLSSNQPSQRQSFVQNHFQAQYRSSLTCPHCQKQSNTFDPF 224
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEG- 550
+ ++LP+PS TR++ VT+ + + S + ++ G L ++T + +EG
Sbjct: 225 LCVSLPIPSCQTRSLNVTLVFQSKSQM-------FLRIGLAVPLFSTVATLRKMIAEEGK 277
Query: 551 -----LLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAYR------FDRKQGGKIKLEI 598
++L E++ R FF+ E ++ I D +++ A++ + ++ L +
Sbjct: 278 ISANEVVLVELHPSGFQRSFFDE--EDLNCISDGDNVYAFQAPLSPIWGTPNAERVGLPL 335
Query: 599 VNRWQEKSASDYLKGSERKL----------------FGAPLVTYLEEEHLSGADIDIAVS 642
+ + S GS K+ FG PL+ E+ +S V
Sbjct: 336 LPQTSTLSTESLTSGSGSKVLILLCNLVGSGHKAKRFGPPLLMR-EDRAISWDQFQQQVF 394
Query: 643 KLLSPLRRTYSSAKAHGGKENGFLPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTD 702
+ L + S ++ G +V L ++CS LS D
Sbjct: 395 STIQCLMKKEVSLQSLGSLF-----------------AVRVVGLSNVCSY-----LSPQD 432
Query: 703 ERISSCKPIQKD-SILKPG--KHIKVLLDWTDDVHELY----DPSYIKDLPVVHKTGFTV 755
R +++ + +PG HIK+ ++W EL+ ++D P V
Sbjct: 433 GRPLFHWAVERSLKLSRPGGPPHIKLAIEWDKTTKELFFGNIQEEVVQDAPSVQ---LQQ 489
Query: 756 KKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRF 815
+ Q + +L C + EE L PDD W CP CK +Q KL LW LPD+L+ HLKRF
Sbjct: 490 QAHLQPSCTLNECFQLYTKEEQLAPDDAWKCPHCKILQQGMVKLSLWTLPDILIIHLKRF 549
Query: 816 SYSRYLKNKLDTFVNFPILNLDLSKYMKSKD-GES----------------------YVY 852
+NKL T V FP+ L+++ ++ + G+ ++Y
Sbjct: 550 CQVGERRNKLSTLVKFPLFGLNMAPHVAKRSLGQEHLMNSWPSWEQASCLPNNCSFDFLY 609
Query: 853 DLFAISNHYGGLGGGHYTAYAK 874
DL+A+ NH+G + GGHYTAY +
Sbjct: 610 DLYAVCNHHGSMQGGHYTAYCR 631
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 57 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 116
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 117 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 176
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 177 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 236
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 237 YLSLPLASTSKCTL 250
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 249 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 308
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 309 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 362
>gi|328863265|gb|EGG12365.1| ubiquitin-specific protease [Melampsora larici-populina 98AG31]
Length = 1194
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 129/200 (64%), Gaps = 7/200 (3%)
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHG 366
+N++ + + G+ GL+NLGNTC+MNS LQC+ T LA++F G Y IN NPLG G
Sbjct: 856 FNSSFEDGQVGMTGLKNLGNTCYMNSTLQCISATIPLARFFKDGSYKRCINRVNPLGTKG 915
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
LA +L+R +WS+ V+P F+ + RFAPQF G +QHD+QE L FLLDGLHEDL
Sbjct: 916 ALAETVAELVRMMWSAQYTFVSPTIFREAICRFAPQFRGSDQHDAQEFLGFLLDGLHEDL 975
Query: 427 NRVKQKPY-IEMKDSG-----GRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
N V KP IEM + P + + W+ +K R++S+IV++FQGQY+S L C
Sbjct: 976 NLVTHKPAPIEMSSAREAELEALPTQLASAREWEIYKRRDNSVIVELFQGQYRSRLQCLT 1035
Query: 481 CSKVSITFDPFMYLTLPLPS 500
C S T++ FMYL+LP+P+
Sbjct: 1036 CGTTSTTYNTFMYLSLPIPT 1055
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 23/130 (17%)
Query: 763 ISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK 822
+SL CLDAFL EE + DD W CP+CK R+ATK+L + LP +L+ HLKRFS+
Sbjct: 1062 VSLTQCLDAFLKEEIMEKDDAWNCPKCKTRRKATKRLSIARLPPILLIHLKRFSFKGPFS 1121
Query: 823 NKLDTFVNFPILNLDLSKYMKSK-----------------------DGESYVYDLFAISN 859
+KL+ FV +P+ LDL+ Y+ + G S VYDL+A+ N
Sbjct: 1122 DKLEAFVQYPLYGLDLTNYIPAPLESLNNHHPSKKSSSKNGGGGGGGGPSTVYDLYAVCN 1181
Query: 860 HYGGLGGGHY 869
H+G L GH+
Sbjct: 1182 HFGSLSSGHW 1191
>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
Length = 1106
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDY-SDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF +Y D+IN N LG GE+A F
Sbjct: 759 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQDDINRSNLLGHKGEVAEEF 818
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 819 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 878
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C + S TF+ FM
Sbjct: 879 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHRKSRTFEAFM 938
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 939 YLSLPLASTSKCTL 952
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 73/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 951 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1010
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y LF++SNHYGGL GGHYTAY K A
Sbjct: 1011 KLQTSVDFPLENLDLSQYVIGPKHSLKKYSLFSVSNHYGGLDGGHYTAYCKNAA 1064
>gi|164655843|ref|XP_001729050.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
gi|159102939|gb|EDP41836.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
Length = 808
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
GL GL+N G TC+MN+ +QCL + LAQY L G Y INT+NPLG G LA AF LL
Sbjct: 451 GLTGLRNFGQTCYMNATIQCLSASVLLAQYLLDGTYKRAINTQNPLGTRGALANAFASLL 510
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK-PYI 435
R LWS +VAP AF+ + +FAP F G Q DSQE L FLLDGLHEDLN V Q+ P +
Sbjct: 511 RALWSEQSVSVAPTAFREAIGQFAPAFRGNEQQDSQEFLMFLLDGLHEDLNLVVQRPPAL 570
Query: 436 EMKDSG----GRPDEEVANEC-WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
E+ ++ R +++A+ W ++ RNDS++VD FQGQ ++ L C C SIT++
Sbjct: 571 ELGEAQQAELSRLPQQLASVAEWSLYRRRNDSIVVDTFQGQLRNQLTCLTCGHTSITYNA 630
Query: 491 FMYLTLPLPS 500
FM L+LP+P+
Sbjct: 631 FMSLSLPVPT 640
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 15/128 (11%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL+ C+DAF+ EE L + W+CP+CK+ R++TK+L L LP VL+ HLKRF++ N
Sbjct: 648 SLYQCMDAFVREEVLEKGNAWHCPKCKKPRRSTKRLSLARLPPVLIIHLKRFTFRGPASN 707
Query: 824 KLDTFVNFPILNLDLSKYMKS--KDGES-------------YVYDLFAISNHYGGLGGGH 868
K++T V F LDLS +M G S Y+YDLFA+++H+G L GH
Sbjct: 708 KIETPVVFATDALDLSNFMPPPLPPGTSVRGIPISESQRPPYLYDLFAVTHHFGTLHSGH 767
Query: 869 YTAYAKVN 876
YTA +
Sbjct: 768 YTASVRTQ 775
>gi|431896007|gb|ELK05425.1| Ubiquitin carboxyl-terminal hydrolase 8 [Pteropus alecto]
Length = 1022
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y ++IN N LG GE+A F
Sbjct: 767 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYHEDINRSNLLGHKGEVAEEF 826
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 827 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 886
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 887 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 946
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 947 YLSLPLASTSKCTL 960
>gi|340505013|gb|EGR31392.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 399
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 127/190 (66%), Gaps = 5/190 (2%)
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ GL GL NL NTCF+NSA+QCL + L Y + + + ++N NPLG G+LA+++ +
Sbjct: 37 QKGLTGLLNLTNTCFLNSAIQCLSNIEKLTFYMISNQFIKDLNINNPLGTKGQLAVSYSN 96
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAP----QFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
L++++W V+P K + + QFSG+NQ DSQELL F+LDGLHEDLNR+K
Sbjct: 97 LIKQIWQGTEPYVSPIQIKKIIEKKNKKIHCQFSGFNQQDSQELLNFILDGLHEDLNRIK 156
Query: 431 QKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
KP IE + G DE A + N+K RNDS+I D+ GQ+KSTL+CP C K+SITFDP
Sbjct: 157 NKPIIENIEYQGGNDELYAERFFMNYKQRNDSIICDLMLGQFKSTLMCPDCRKISITFDP 216
Query: 491 FMYLTLPLPS 500
+M +++P+P
Sbjct: 217 YMTISVPVPQ 226
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 737 YDPSYIKDLPV--VHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQ 794
+DP +PV + + +++ Q S++ C++ F+ EE L + WYC C EH+
Sbjct: 214 FDPYMTISVPVPQIRQINLSLQWNCQNTFSIYDCINEFVQEEILQKGNEWYCNICGEHKL 273
Query: 795 ATKKLDLWMLPDVLVFHLKRFSYSRYLK-----------NKLDTFVNFPILNLDLSKYMK 843
A KK++++ P++L+ HLKRF K K+ + V+FPI NL+L ++
Sbjct: 274 AKKKIEIYQTPEILILHLKRFKVGTVNKYGGKYFVEQEGKKITSLVDFPIENLNLEDFVL 333
Query: 844 SKDGESYVYDLFAISNHYGGLGGGHYTAYA 873
+K S VY+LFA+S H G GGHYT A
Sbjct: 334 NKKQISNVYNLFAVSQHLGEAAGGHYTTMA 363
>gi|320167272|gb|EFW44171.1| Usp8 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1162
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 141/263 (53%), Gaps = 28/263 (10%)
Query: 264 SRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG-GLAGL 322
S SS I P+ T G + G+S ++ M ++ G G GL GL
Sbjct: 824 SPSSDMIGTSPSFQQ-QTAGRSPSTRSGTSPSASVMYGSPSAAPVQSSAYGGVGDGLTGL 882
Query: 323 QNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWS 381
+NLGNTCFMNS LQCL HT + YF+ + + ++N N LG G LA +F +LLR LW
Sbjct: 883 RNLGNTCFMNSMLQCLSHTMPVTAYFISNKFRQDVNRYNRLGRGGILAESFSELLRNLWL 942
Query: 382 SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR---VKQKPYIEMK 438
+P F G + RF PQF+G QHDSQELLAFLLDGLHEDLN K + +
Sbjct: 943 QRFRCFSPSDFLGAVCRFGPQFAGGEQHDSQELLAFLLDGLHEDLNTKGLTKNNQQLITQ 1002
Query: 439 DSGGR----------------------PDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
G R P E A W+ +K RNDS+IVD+FQG +KS++
Sbjct: 1003 SDGTRALVAALPNRDQQEEEDEARRNMPVELRAERAWQRYKQRNDSVIVDMFQGLFKSSI 1062
Query: 477 VCPVCSKVSITFDPFMYLTLPLP 499
C VC SITF PFM+L+LP+P
Sbjct: 1063 QCDVCRHASITFSPFMFLSLPIP 1085
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L C++ F E + ++ W+C +C++HR A K L LW LP VL+ H KRF Y ++
Sbjct: 1092 TLADCIELFTRSERIDGENQWFCERCRQHRSAVKSLQLWKLPPVLLIHFKRFYYDGPWRD 1151
Query: 824 KLDTFVNFPI 833
KL +V FP+
Sbjct: 1152 KLHHYVEFPL 1161
>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
porcellus]
Length = 1077
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 730 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 789
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 790 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 849
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C + S TF+ FM
Sbjct: 850 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHRKSRTFEAFM 909
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 910 YLSLPLASTSKCTL 923
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 922 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 981
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 982 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1035
>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
(Silurana) tropicalis]
Length = 1059
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 307 SYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMH 365
S N G L GL+NLGNTC+MNS LQCL +TP L +YF + Y IN N LG
Sbjct: 705 SLNPVFGGAGPALTGLRNLGNTCYMNSILQCLCNTPHLIEYFNNNFYQAHINRSNLLGHK 764
Query: 366 GELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHED 425
GE+A FG ++R LW+ ++P+ FK + + QF+GY DSQELL FL+DGLHED
Sbjct: 765 GEVAEEFGCIMRALWTGQYKYISPKDFKITIGKINEQFAGYTHQDSQELLLFLMDGLHED 824
Query: 426 LN-RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
LN + + + +++ D + A+ W HK N+S+IV +FQGQ+KST+ C C K
Sbjct: 825 LNKKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVALFQGQFKSTVQCLTCQKK 884
Query: 485 SITFDPFMYLTLPLPST 501
S TF+ FMYL+LPLPST
Sbjct: 885 SRTFEAFMYLSLPLPST 901
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
SL C+ AF EE L + + C CK R ATKK+++W LP +L+ HLKRFS+ +
Sbjct: 905 SLQDCIKAFAKEEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEGRWRQ 964
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL ++V+FP+ +LDLS+Y+ Y+LF +SNHYGGL GGHYTAY K
Sbjct: 965 KLQSYVDFPLESLDLSQYVIGPKN-VKTYNLFGVSNHYGGLDGGHYTAYCK 1014
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 140 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 199
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 200 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 259
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 260 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 319
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 320 YLSLPLASTSKCTL 333
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 332 TLQDCLRLFSKEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 391
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 392 KLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 445
>gi|324501057|gb|ADY40477.1| Ubiquitin carboxyl-terminal hydrolase 32 [Ascaris suum]
Length = 1248
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 245/551 (44%), Gaps = 119/551 (21%)
Query: 14 GGSCLPCTPDE---ERQIVQDLKNQSDLD-LKEGNLYFLISTRWYRSWERYVCGDEPSID 69
G CL P++ E IV K + L+ E N+ +S W+R W +
Sbjct: 285 GHICLGLRPNKAEVELTIVSGFKERIGLESFAEWNV---VSAEWWREWVYAL-------- 333
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNG--------SSEGDDLEVRRNLEEGQD 121
R++ P PI+NS I+ + S G+ +R L+EG+D
Sbjct: 334 -------------MSRSKVP-PINNSAIVASKAKNDWASKVPSLSGEGAPLRPGLQEGKD 379
Query: 122 YVLVPQQVWEKLFCWY----KGGPALPRKMISEGIVNEKR-------VEVFXLCLKLIDS 170
+ ++ +W L W+ + G +LPR+++ V+ VE++ L L ++
Sbjct: 380 FEVLAPCLWRSLLRWHGSAAREGVSLPRRVVPSSYVDPSSRTPSLPTVELYPLTLLILRH 439
Query: 171 RDNSQTVIR------LSKKASTRQL-YEKVC----------------KLRGIEQEKARIW 207
S ++ S K+S RQ + VC +LR + E AR+W
Sbjct: 440 STASGGWLQSAFEWNASVKSSMRQSPWCSVCMSRSNTVGEVLSLLINQLRISDMESARLW 499
Query: 208 DY-FNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRS 266
+ ++S LD TL D + +LLE++ D++ P E SR
Sbjct: 500 AIEIDGKKSRKLLDKDSLTLHDLKIVSFAQLLLELR----------NADMSW-PEEVSR- 547
Query: 267 SLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLG 326
L I GG + S+ +G D G+ G+ N+G
Sbjct: 548 -LEIGGGDSESS------------------------EGED------PPSGKGVTGIYNMG 576
Query: 327 NTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRA 385
NTC+MNSA+QCL +T L +YF+ G + ++ + G +AL +G ++ +LWS +
Sbjct: 577 NTCYMNSAIQCLSNTKPLTEYFIEGRHKQDMKKLS--STKGTVALEYGSVVAELWSGKKR 634
Query: 386 AVAPRAFKGKL-ARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRP 444
+AP + + A F+ QHD QE L+ LLD LHEDLNRV KPY+E+ DS GRP
Sbjct: 635 NIAPIKLRDAISANAGGVFAERTQHDCQEFLSILLDLLHEDLNRVVNKPYVELTDSNGRP 694
Query: 445 DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
D VA E W H R S+IVD+F GQ +S L C VC +S FD F L LP+P
Sbjct: 695 DVVVAKEAWDAHMRREQSIIVDLFTGQLRSLLTCTVCESLSSRFDAFTCLQLPIPIDHLL 754
Query: 505 TMTVTVFYANG 515
+ V V +G
Sbjct: 755 LIPVVVVKRDG 765
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 610 YLKGSERK----LFGAPLVTYLEEEHLSGADIDIAVSKLLSPLRRTYSSAKAHGGKENGF 665
YL G+ R LFG PLV +G ++ V +S + S ++ +
Sbjct: 949 YLLGAARGCTICLFGVPLVIRFSPGKTTGTELYEEVWFQVSRFLQNGPSDRSQRTRGTN- 1007
Query: 666 LPEVIDELSNSHNESVETAELEDLCSRELSFQLSLTDERISSCK----PIQKDSILKPGK 721
ID E + + DLC + SF+ C+ P D I +
Sbjct: 1008 --RAIDA-----GEDIRSGYPFDLCMVDASFEWCSRCSWACFCRGCVLPRTGDVINE--S 1058
Query: 722 HIKVLLDWTDDVHELYDPSYIKDLPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPD 781
+ V +DW L ++ L ++ + A SL SCL F E L D
Sbjct: 1059 LVAVAVDWKPTALYLRYQHSVELLCCDDESVLRAWEVHYRACSLISCLSDFTRPELL--D 1116
Query: 782 DMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSY----SRYLKNKLDTFVNFPILNLD 837
+ YC +C K L +W LP +L+ H KRF Y R++K+ V+FP+ +LD
Sbjct: 1117 EPIYCKKCNLKTPTKKSLSIWRLPRILIIHFKRFVYVDAERRWMKSS--KVVDFPLWDLD 1174
Query: 838 LSKYMKSKDG-ESYVYDLFAISNHYGGLGGGHYTAYAK 874
LS+++ +D +S Y+ FAI+NHYG + GHY AYA+
Sbjct: 1175 LSQWVLDQDAFDSAKYNCFAIANHYGAMASGHYVAYAR 1212
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 185 bits (470), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y ++IN N LG GE+A F
Sbjct: 770 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSNLLGHKGEVAEEF 829
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 830 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 889
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 890 KRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 949
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 950 YLSLPLASTSKCTL 963
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 962 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 1021
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDL++Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 1022 KLQTSVDFPLENLDLAQYVIGPKNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1075
>gi|403331641|gb|EJY64779.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1514
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 237/539 (43%), Gaps = 75/539 (13%)
Query: 19 PCTPDEERQ-IVQDLKNQSDLD------LKEGNLYFLISTRWYRSWERYVCGDEPSIDNI 71
P DEER+ I+ L N ++ L + +++I +Y +W N+
Sbjct: 315 PSDEDEEREAILSALNNNHSVEGFIQDHLDTEDTFYVIEKNFYEAWTM----------NV 364
Query: 72 SFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWE 131
F + ++ D+I N + +L ++ L G ++LVP+ V+
Sbjct: 365 GFVDDKSYIIKKEKI---------DVIDNASLMEPMHELRIKDELAYGDKFILVPRFVFY 415
Query: 132 KLFCWYKGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSR---DNSQTV-----IRLSKK 183
L WYK + RK+IS ++ + +F + S +SQ+V + +
Sbjct: 416 PLSKWYKMTKVIERKVISYKTDKKRALNLFKQRKSVTGSMIIAGSSQSVPDPFFKTIGET 475
Query: 184 ASTRQLYEKVCKLRGIEQ--EKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV 241
++Y K I + E+ + N++ DQ +L+ D+ E+
Sbjct: 476 TFELEVYPKFFYYERITEKGERPHLKALVNQK--------IDQNYVKKVLKSDKLPFYEM 527
Query: 242 QVDNGISMDSTGNDLALV--------------------PIEPSRSSLTIAGGPALSNGHT 281
V + D D+++ +E + IA G + +
Sbjct: 528 LVSRKQTFDDILKDISVTFKENYKRGRLWIEDQVISGAKLETTLEEYGIAIGQVIYVEYA 587
Query: 282 TGYRFNQYPG-------SSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSA 334
+ NQ+P SS T G K E GL NLGNTC+MNSA
Sbjct: 588 N--QNNQWPTDKVSAAPSSGNKTISTHPSGPSDGGVIKNVEDYRTVGLYNLGNTCYMNSA 645
Query: 335 LQCLVHTPDLAQYFLGD--YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
LQCL +T +YF+ + Y ++N +N LG GELA F L++K++ G V P+ F
Sbjct: 646 LQCLANTKFFYEYFIQEKRYMKQMNIKNKLGHQGELASNFAQLMQKMYLEGGRVVIPKEF 705
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
KG +A + QF+GY+Q DSQE L FLLDGLHE+LN +KPY E +S R E+ E
Sbjct: 706 KGAIATISEQFAGYDQQDSQEFLFFLLDGLHEELNLRLEKPYAENPNSDDRKIVELGLEQ 765
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
W N R+ S I +F GQ KSTL C C+K+S TFD F + L LP + V ++
Sbjct: 766 WSNTLRRDWSFIFFLFYGQLKSTLNCQKCNKISTTFDIFTNIPLSLPEPSKILLNVVIY 824
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 710 PIQKDSILKPGKHIKVLLDWTDDVHEL-YDPSYIKDLPVVHKTGFTVKKTRQE-AISLFS 767
P +D I K I + ++W V E Y+P + V+H K+ E ++L
Sbjct: 1160 PPTEDFIDDFVKQIHLAIEWNSSVIEDDYNP---QSNEVIHHPSTQDKQIIDEDQVNLED 1216
Query: 768 CLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKNKLDT 827
CL F E + D YC CKE + KKL+++ P +L+ LKRF ++ +NKL+T
Sbjct: 1217 CLRKFHEVEEISEKDNIYCSTCKEPQSHLKKLEIFRPPPILIVQLKRFKFNNQSRNKLNT 1276
Query: 828 FVNFPILNLDLSKYMKSKD--GESYV---YDLFAISNHYGGLGGGHYTAYAK 874
V FP+ NLD+S ++ D S + YDL+A+ NHYG L GHY + K
Sbjct: 1277 LVEFPLYNLDVSTFVTDVDFLNNSDIEQKYDLYAMINHYGNLSFGHYISIVK 1328
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA+YF + Y +IN N LG GE+A F
Sbjct: 740 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEEF 799
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QFSGY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 800 GVIMKALWAGQYKYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNR 859
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D A W HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 860 KRYKEENNDHLDDSSAAEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAFM 919
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL S+ T+
Sbjct: 920 YLSLPLASSSKCTL 933
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 72/111 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC CK R + KK+++W LP VL+ HLKRFSY K
Sbjct: 932 TLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 991
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAK 874
KL T V+FP+ LDLS+Y+ Y+LF++SNHYGGL GGHYTAY K
Sbjct: 992 KLQTSVDFPLETLDLSQYVIGPKTSLKRYNLFSVSNHYGGLDGGHYTAYCK 1042
>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1173
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTC+MNS +QCL T +++F G + +N NP+G G LA AF ++L
Sbjct: 813 GTTGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANIL 872
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI- 435
R++W ++P F+ L APQFSG QHDSQE L+FLLDGLHEDLNR+ KP +
Sbjct: 873 REMWQGEHGTLSPVPFRRSLCSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRILAKPQVV 932
Query: 436 ---EMKDSGGRPDEEVANEC-WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
E + R ++A+E W+ ++ R+DSL+VD FQGQY++ + C C K S T++ F
Sbjct: 933 STPEREAELERLPTQIASEQEWQIYRMRDDSLVVDFFQGQYRNRMECLTCHKTSTTYNTF 992
Query: 492 MYLTLPLP 499
MYLTLP+P
Sbjct: 993 MYLTLPVP 1000
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 25/146 (17%)
Query: 745 LPVVHKTGFTVKKTRQEAISLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWML 804
LPV K+G + L C+DAF+ EE + D W+CP CK R+ATK+L L L
Sbjct: 997 LPVPPKSG-------NAKVPLQQCIDAFVKEEVMDKSDAWHCPHCKTLRKATKRLSLSRL 1049
Query: 805 PDVLVFHLKRFSYSRYLKNKLDTFVNFPILNLDLSKYMKSK------------------D 846
P VL+ HLKRFS +K++T V FP+ LDL+ YM
Sbjct: 1050 PPVLLIHLKRFSAKGPFTDKIETTVEFPLKGLDLTNYMPPPLPPGVSGGSPVQPDDPRYQ 1109
Query: 847 GESYVYDLFAISNHYGGLGGGHYTAY 872
Y YDL+ ++NH+G L GHYTA+
Sbjct: 1110 NPPYRYDLYGVTNHFGSLSTGHYTAF 1135
>gi|392576694|gb|EIW69824.1| hypothetical protein TREMEDRAFT_30214 [Tremella mesenterica DSM 1558]
Length = 1221
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 122/190 (64%), Gaps = 8/190 (4%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
GL GL+NLG TC+MNS +QCL T A+ FL G Y +N NPLG G LA AFGDLL
Sbjct: 874 GLTGLKNLGATCYMNSTIQCLSATYPFARLFLDGGYKKMVNVSNPLGTKGVLAKAFGDLL 933
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYN-QHDSQELLAFLLDGLHEDLNRVKQKPY- 434
LW + P+ F+ + FAPQF+ N QHDSQE L+F+LDGLHEDLNRV KP
Sbjct: 934 HALWEEQYHFLTPKTFRASITAFAPQFTATNEQHDSQEFLSFVLDGLHEDLNRVLVKPPP 993
Query: 435 IEMKDSGGRPDE----EVANEC-WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFD 489
+EM E EVA+E W+ ++ R+DS IVD+FQGQY++ L C C K S T+D
Sbjct: 994 VEMTPEREHALETLSPEVASEKEWQIYRMRDDSFIVDLFQGQYRNRLECLTCGKTSTTYD 1053
Query: 490 PFMYLTLPLP 499
FMY++L +P
Sbjct: 1054 AFMYMSLQIP 1063
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 769 LDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLK-NKLDT 827
+D F+ E + DD WYCP+CK R+A+K L + LP VL+ LKRFS L +K D
Sbjct: 1075 IDEFVETEIIDKDDAWYCPRCKVPRRASKTLTIARLPPVLLIQLKRFSTKDGLFWDKSDA 1134
Query: 828 FVNFPILNLDLSKYMKSK---------DGESYV----YDLFAISNHYGGLGGGHYTAYAK 874
+ FP+ NLDLS+Y+ + D + V YD +A+SNH G L GHYTAY K
Sbjct: 1135 HIVFPLKNLDLSRYVPPRMSTGREDLGDPRTQVAPFKYDCYAVSNHIGTLSSGHYTAYVK 1194
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 728 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 787
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+G +Q DSQELL FL+DGLHEDLN+ +
Sbjct: 788 GIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNR 847
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 848 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 907
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 908 YLSLPLASTSKCTL 921
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 920 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 979
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 980 KLQTSVDFPLENLDLSQYVIGPKSSLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1033
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 732 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 791
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+G +Q DSQELL FL+DGLHEDLN+ +
Sbjct: 792 GIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNR 851
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 852 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 911
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 912 YLSLPLASTSKCTL 925
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 74/114 (64%)
Query: 764 SLFSCLDAFLTEEPLGPDDMWYCPQCKEHRQATKKLDLWMLPDVLVFHLKRFSYSRYLKN 823
+L CL F EE L ++ +YC C+ R + KK+++W LP VL+ HLKRFSY K
Sbjct: 924 TLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 983
Query: 824 KLDTFVNFPILNLDLSKYMKSKDGESYVYDLFAISNHYGGLGGGHYTAYAKVNA 877
KL T V+FP+ NLDLS+Y+ Y+LF++SNHYGGL GGHYTAY K A
Sbjct: 984 KLQTSVDFPLENLDLSQYVIGPKSSLKKYNLFSVSNHYGGLDGGHYTAYCKNAA 1037
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,589,670,877
Number of Sequences: 23463169
Number of extensions: 651818483
Number of successful extensions: 1527790
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4840
Number of HSP's successfully gapped in prelim test: 3188
Number of HSP's that attempted gapping in prelim test: 1498123
Number of HSP's gapped (non-prelim): 20164
length of query: 877
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 725
effective length of database: 8,792,793,679
effective search space: 6374775417275
effective search space used: 6374775417275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)