Query 002812
Match_columns 877
No_of_seqs 340 out of 2406
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 02:36:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002812.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002812hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 7E-162 2E-166 1472.3 88.6 850 5-875 64-962 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 3E-158 1E-162 1447.5 75.5 849 4-874 5-903 (909)
3 2xdt_A Endoplasmic reticulum a 100.0 9E-157 3E-161 1430.7 87.3 842 5-872 4-891 (897)
4 1z5h_A Tricorn protease intera 100.0 2E-142 6E-147 1286.5 67.5 773 14-862 1-777 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 2.4E-97 8E-102 896.8 54.6 723 6-780 9-790 (867)
6 3b34_A Aminopeptidase N; prote 100.0 2E-88 6.9E-93 815.6 62.1 708 6-764 32-793 (891)
7 3ebh_A PFA-M1, M1 family amino 100.0 1.2E-88 3.9E-93 811.4 59.4 704 11-759 11-789 (889)
8 3cia_A Cold-active aminopeptid 100.0 7.9E-82 2.7E-86 740.4 26.3 528 6-620 18-561 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 3.2E-80 1.1E-84 727.1 31.8 448 7-477 6-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 1.5E-79 5E-84 722.9 23.6 528 7-620 21-589 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 3.1E-73 1.1E-77 641.1 44.4 398 457-874 1-410 (419)
12 4fgm_A Aminopeptidase N family 100.0 1.8E-27 6.3E-32 275.4 21.2 297 155-460 119-451 (597)
13 2y3u_A Collagenase, collagenas 82.7 2.3 7.8E-05 49.9 8.0 107 232-340 338-469 (785)
14 1u4g_A Elastase, pseudolysin; 81.3 52 0.0018 33.8 18.9 98 234-342 73-175 (301)
15 1bqb_A Protein (aureolysin); h 81.2 4.6 0.00016 41.6 8.8 107 234-341 67-178 (301)
16 3cqb_A Probable protease HTPX 75.2 2.7 9.3E-05 36.2 4.3 68 240-318 27-99 (107)
17 4ger_A Gentlyase metalloprotea 73.1 25 0.00084 36.2 11.4 108 233-351 62-176 (304)
18 3dnz_A Thermolysin; hydrolase, 71.8 12 0.00042 38.6 8.9 102 233-342 69-177 (316)
19 2vqx_A Metalloproteinase; ther 70.4 32 0.0011 36.0 11.8 101 233-342 89-197 (341)
20 1lsh_A Lipovitellin (LV-1N, LV 67.4 16 0.00056 45.1 10.4 191 550-763 355-557 (1056)
21 3nqx_A MCP-02, secreted metall 64.7 37 0.0013 34.8 10.6 99 234-342 74-176 (306)
22 2qk1_A Protein STU2; STU2P, XM 55.4 95 0.0032 30.8 12.0 98 566-673 29-135 (249)
23 2ejq_A Hypothetical protein TT 51.7 5.2 0.00018 35.7 1.5 44 279-325 68-111 (130)
24 1r55_A ADAM 33; metalloproteas 38.4 24 0.00083 34.4 4.1 14 301-314 135-148 (214)
25 1bud_A Protein (acutolysin A); 34.8 42 0.0014 32.1 5.2 13 302-314 133-145 (197)
26 1yp1_A FII; FII hydrolase; 1.9 34.5 41 0.0014 32.3 5.0 13 302-314 135-147 (202)
27 2w15_A Zinc metalloproteinase 34.2 45 0.0015 32.0 5.3 14 301-314 135-148 (202)
28 3c37_A Peptidase, M48 family; 33.5 53 0.0018 32.9 5.8 19 299-317 97-115 (253)
29 3isy_A Bsupi, intracellular pr 32.4 2.5E+02 0.0085 24.4 10.0 26 88-113 81-106 (120)
30 2ero_A VAP-1, vascular apoptos 29.0 59 0.002 35.4 5.7 14 301-314 145-158 (427)
31 1atl_A Atrolysin C; metalloend 27.2 41 0.0014 32.3 3.6 13 302-314 136-148 (202)
32 1qua_A Acutolysin-C, hemorrhag 26.4 43 0.0015 32.0 3.6 13 302-314 135-147 (197)
33 2c9r_A COPC, copper resistance 26.2 2E+02 0.0069 24.0 7.3 22 86-108 64-85 (102)
34 1kuf_A Atrolysin E, metallopro 24.6 43 0.0015 32.2 3.2 14 301-314 137-150 (203)
35 1lyq_A PCOC copper resistance 23.9 2.2E+02 0.0074 23.9 7.1 22 86-108 66-87 (104)
36 3k7n_A K-like; SVMP, hydrolase 22.7 87 0.003 33.6 5.4 14 301-314 138-151 (397)
37 3ltj_A Alpharep-4; protein eng 22.7 3.7E+02 0.013 24.7 9.7 89 660-761 28-116 (201)
38 3s51_A Protein FACI, fanconi a 22.5 1.7E+02 0.0057 36.3 8.2 140 549-689 39-184 (1308)
39 2e3x_A Coagulation factor X-ac 22.4 43 0.0015 36.5 3.0 14 301-314 138-151 (427)
40 3iuk_A Uncharacterized protein 21.5 1.2E+02 0.0043 34.1 6.6 54 407-460 495-554 (562)
41 2dw0_A Catrocollastatin; apopt 20.9 55 0.0019 35.5 3.4 14 301-314 136-149 (419)
42 3k7l_A Atragin; SVMP, metallop 20.6 86 0.003 34.0 4.9 14 301-314 143-156 (422)
43 3e11_A Predicted zincin-like m 20.2 55 0.0019 28.2 2.6 35 278-314 68-102 (114)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=6.7e-162 Score=1472.27 Aligned_cols=850 Identities=34% Similarity=0.599 Sum_probs=772.8
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCC-cccccceeEEEe
Q 002812 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS-KQALEPTKVELV 83 (877)
Q Consensus 5 ~~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~-~~~~~~~~~~~~ 83 (877)
-.++|||.+++|.||+|.|++++++.+|+|+|+|++++.++++.|+||+++|+|+++.+....+... ..........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4579999999999999999999999999999999999999999999999999999999864321000 001112222333
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeeeeeeeccCCCCCCceeeccCCCCCceEEEE
Q 002812 84 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 161 (877)
Q Consensus 84 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l 161 (877)
..+.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678889999999999 99999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEEcCCcccce-eecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHHH
Q 002812 162 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 240 (877)
Q Consensus 162 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 240 (877)
+|++|++|+|+|||++.++ ...+++++++|+.+||||+|++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678999999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002812 241 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 320 (877)
Q Consensus 241 ~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 320 (877)
+.+++++||++||+|||++|+|+|++|+|..||||||||++|+|..+++++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHHHHhhhcccCCCCceeeecCCcchhhccccccccchhhHHH
Q 002812 321 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 400 (877)
Q Consensus 321 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl 400 (877)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666567889999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 002812 401 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 453 (877)
Q Consensus 401 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~ 453 (877)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.||++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCCEEEEEEEeeccCCCC---------CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccc
Q 002812 454 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 524 (877)
Q Consensus 454 ~~~g~P~l~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (877)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+..++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875432 23589999999987654445577776666666542
Q ss_pred cCCCCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHc--cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCC
Q 002812 525 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 602 (877)
Q Consensus 525 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 602 (877)
.+ +||++|.++.||||||||+++|.+|+++|.. ..||+.||||||+|+|+||++|.++|+.+|++++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 8999999999999999999999999999975 3699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002812 603 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 681 (877)
Q Consensus 603 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~ 681 (877)
+|+||.++++.|..+.+++... .++.+..|++|+++++.|+++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 24578899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002812 682 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 761 (877)
Q Consensus 682 a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 761 (877)
|+++|++|++++....||||+|.+|||++++ ++++|++||++|++++++.||..+|.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999998643 48899999999999999999999999999999999999999999
Q ss_pred ccCc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc
Q 002812 762 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP 836 (877)
Q Consensus 762 l~~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~~ 836 (877)
++++ ||.||...++. ++.| |+.++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++..
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~ 924 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ 924 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence 9874 89999999998 8877 99999999999999999999854 689999999999999999999999999987654
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002812 837 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 875 (877)
Q Consensus 837 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~ 875 (877)
...+++++++|+|+.|++|++++.+. |.+||+.|++.
T Consensus 925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~ 962 (967)
T 3se6_A 925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH 962 (967)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence 34689999999999999999999999 99999998753
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=3.1e-158 Score=1447.54 Aligned_cols=849 Identities=33% Similarity=0.563 Sum_probs=763.9
Q ss_pred cCCCCcCCCCceeeEEEEEEEecCCC-----CeEEEEEEEEEEEECCCCEEEEEeCCceeeEE----EEeeccCcCCccc
Q 002812 4 FKGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKQA 74 (877)
Q Consensus 4 ~~~~~rLp~~~~p~~Y~l~l~~~~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~~~~~~~~~~~~~ 74 (877)
+-+++|||.+++|+||+|.|+++++. .+|+|+|+|++++.++++.|+||+++|+|... .+... +....
T Consensus 5 P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~---~~~~~ 81 (909)
T 4fke_A 5 PWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV---GDSQV 81 (909)
T ss_dssp GGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES---TTCCC
T ss_pred CcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC---CCcce
Confidence 45789999999999999999998653 57999999999999999999999999999763 23221 12233
Q ss_pred ccceeEEEecCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeeccCCeeeeeeeeccCCCCCCceeeccCCC
Q 002812 75 LEPTKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEP 153 (877)
Q Consensus 75 ~~~~~~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep 153 (877)
.......++...+.++|.++++|++| .|+|+|.|+|++++++.|||++.|.++|..+++++|||||++||+||||||||
T Consensus 82 ~~~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP 161 (909)
T 4fke_A 82 PEIDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEP 161 (909)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCST
T ss_pred ecccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCcc
Confidence 45567788889999999999999999 89999999999999999999999998888999999999999999999999999
Q ss_pred CCceEEEEEEEeCCCCeEEcCCccccee----ecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCC
Q 002812 154 ACKATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVG 229 (877)
Q Consensus 154 ~~ka~f~l~i~~p~~~~~~sn~~~~~~~----~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~ 229 (877)
++||+|+|+|++|++|+|+|||++.++. .++++++++|+++||||+|++||+||+|+.++..+.+|+++++|++|+
T Consensus 162 ~~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~ 241 (909)
T 4fke_A 162 AMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPN 241 (909)
T ss_dssp TSCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHH
T ss_pred ccceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecc
Confidence 9999999999999999999999988653 246799999999999999999999999999887778899999999998
Q ss_pred ccc--hHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHH
Q 002812 230 KAN--QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVA 307 (877)
Q Consensus 230 ~~~--~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~ia 307 (877)
..+ +++++++.+.+++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|++++.++...++.++.+||
T Consensus 242 ~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~via 321 (909)
T 4fke_A 242 AIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIA 321 (909)
T ss_dssp HHHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHH
Confidence 644 467999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HHhhhcccCCCCceeee---cCCcch
Q 002812 308 HELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGE 383 (877)
Q Consensus 308 HElaHqWfGnlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~---~~~~~~ 383 (877)
||+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.+
T Consensus 322 HElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~ 401 (909)
T 4fke_A 322 HELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQ 401 (909)
T ss_dssp HHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHH
T ss_pred HHHHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhh
Confidence 99999999999999999999999999999999999999999999888877665 67889999999999875 667888
Q ss_pred hhccccccccchhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC--------CHHHHHHHhhcC
Q 002812 384 IDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQ 455 (877)
Q Consensus 384 ~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~--------~l~~~~~~W~~~ 455 (877)
++..|+.++|.||++|||||+..||++.|+++|+.|+++|+|++++++|||++|++++|. ++++||++|+.|
T Consensus 402 i~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q 481 (909)
T 4fke_A 402 ISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQ 481 (909)
T ss_dssp HHTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSS
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCcccc
Confidence 999999999999999999999999999999999999999999999999999999998864 599999999999
Q ss_pred CCcceEEEEEeCCEEEEEEEeeccCCCC-------CCCeeEEEEEEEECcccceeeEEeec-cceEEEecccccccccCC
Q 002812 456 KGYPVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKE 527 (877)
Q Consensus 456 ~g~P~l~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 527 (877)
+|||+|+|+++++. ++|+||...... .+..|+|||++++...... ..++.. ......+.. ..
T Consensus 482 ~G~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~ 551 (909)
T 4fke_A 482 MGFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQD-HYWLRDVSQAQNDLFK-------TA 551 (909)
T ss_dssp CSCEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECC-CEEECSCSEEECGGGC-------CC
T ss_pred CCCcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccc-eEEeeccccceeeecc-------CC
Confidence 99999999887765 678888764321 1347999999987643322 233332 222222221 22
Q ss_pred CCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHcc--CCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHH
Q 002812 528 GDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYT 605 (877)
Q Consensus 528 ~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~ 605 (877)
.+ +||++|.++.||||||||+++|.+|+++|..+ .||+.||+|||+|+|+||++|.++++.+|+++.||++|++|.
T Consensus 552 ~~--~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~ 629 (909)
T 4fke_A 552 SD--DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYM 629 (909)
T ss_dssp TT--CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHH
T ss_pred CC--CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHH
Confidence 34 89999999999999999999999999999754 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002812 606 VLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNE 681 (877)
Q Consensus 606 ~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lr~~i~~~ac~~g~~~c~~~ 681 (877)
||.++++.|..+..++.+ ++.+..|++|+++++.++++++|+... .++++..+.+|..++.+||..|+++|++.
T Consensus 630 ~w~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~ 707 (909)
T 4fke_A 630 PWQAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENL 707 (909)
T ss_dssp HHHHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999876 447899999999999999999965432 35788999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002812 682 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 761 (877)
Q Consensus 682 a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 761 (877)
|+++|++|++++++++||||+|.+|||++ +++|+.++|++++++|+++++.+||..+|.||||++|+++|+++|+++
T Consensus 708 a~~~f~~~~~~~~~~~i~~dlr~~vy~~~---~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~ 784 (909)
T 4fke_A 708 AKTLFDQWMSDPENNPIHPNLRSTIYCNA---IAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYT 784 (909)
T ss_dssp HHHHHHHHHTCTTSCCSCTTTHHHHHHHH---HHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCCCcCCHHHHHHHHHHH---HHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 99999999998777889999999988875 458999999999999999999999999999999999999999999999
Q ss_pred ccC-cCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCC-
Q 002812 762 LSS-EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK- 835 (877)
Q Consensus 762 l~~-~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~- 835 (877)
+++ .||+||...++. ++.| |+.++|+|+++||+.|.++|+++ +.++++|..+++.|+|+++++++++||+.++.
T Consensus 785 l~~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~ 864 (909)
T 4fke_A 785 LNPDLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDV 864 (909)
T ss_dssp TCTTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSS
T ss_pred hCCCCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCcc
Confidence 987 499999999999 8777 99999999999999999999855 67999999999999999999999999998764
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhc
Q 002812 836 --PYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAY 874 (877)
Q Consensus 836 --~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~ 874 (877)
+...+++++++|+|+.|++|++++.+. |.+||++|..
T Consensus 865 ~~~~~~~~~~~~le~i~~n~~w~~~~~~~--i~~wL~~n~s 903 (909)
T 4fke_A 865 GFGSGTRALEQALEKTKANIKWVKENKEV--VLNWFIEHSS 903 (909)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhcCc
Confidence 356789999999999999999999999 9999998854
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=9e-157 Score=1430.71 Aligned_cols=842 Identities=32% Similarity=0.582 Sum_probs=770.3
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccc--cceeEEE
Q 002812 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQAL--EPTKVEL 82 (877)
Q Consensus 5 ~~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~--~~~~~~~ 82 (877)
-.++|||.+++|.||+|.|++|+++.+|+|+++|++++.++++.|+||+.+|+|.++.+.+..+ ..+ ....+..
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~----~~~~~~~~~~~~ 79 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG----ERLSEEPLQVLE 79 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC--------CEEEECEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC----cccccccceeEE
Confidence 4679999999999999999999999999999999999998899999999999999999864211 122 3344566
Q ss_pred ecCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeeeeeeeccCCCCCCceeeccCCCCCceEEE
Q 002812 83 VEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFK 160 (877)
Q Consensus 83 ~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~ 160 (877)
+..++.++|.++++|.+| .++|+|.|+|.+++.+.|||++.|.+ +|+.+++++|||||.+||+||||||+|++||+|+
T Consensus 80 ~~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~ 159 (897)
T 2xdt_A 80 HPRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFS 159 (897)
T ss_dssp ETTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEE
T ss_pred cCCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEE
Confidence 777889999999999999 79999999999999999999999965 6888899999999999999999999999999999
Q ss_pred EEEEeCCCCeEEcCCccccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHH
Q 002812 161 ITLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALN 239 (877)
Q Consensus 161 l~i~~p~~~~~~sn~~~~~~~-~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~ 239 (877)
|+|++|++|+|+|||++.++. ..+++++++|+.++|||+|++||+||+|+.++..+.+|+++++|++|+..++++++++
T Consensus 160 itI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~ 239 (897)
T 2xdt_A 160 IKIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALD 239 (897)
T ss_dssp EEEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHH
T ss_pred EEEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHH
Confidence 999999999999999988763 4567899999999999999999999999998865677999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCcc
Q 002812 240 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 319 (877)
Q Consensus 240 ~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlV 319 (877)
.+.+++++|+++||+|||++|+|+|++|+|..||||||||++|+|..+++++..++...++.++.+||||+|||||||+|
T Consensus 240 ~~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlV 319 (897)
T 2xdt_A 240 AAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLV 319 (897)
T ss_dssp HHHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTE
T ss_pred HHHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 99999999999999999999999999999999999999999999999999999888888899999999999999999999
Q ss_pred ccCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHHHHhhhcccCCCCceeeecCCcchhhccccccccchhhHH
Q 002812 320 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV 399 (877)
Q Consensus 320 t~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~v 399 (877)
||+||+|+|||||||+|++++++++.+|+|.++..|......++..|+..++||+..++.+|.++...|+.++|.||++|
T Consensus 320 T~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~v 399 (897)
T 2xdt_A 320 TMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACI 399 (897)
T ss_dssp EESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHH
T ss_pred ccCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHH
Confidence 99999999999999999999999999999988888855555778889999999999999999999999999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc-------------------c--------CCCHHHHHHHh
Q 002812 400 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSW 452 (877)
Q Consensus 400 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------~--------~~~l~~~~~~W 452 (877)
||||+..||++.|+++|+.|+++|+|++++++|||++|+++ + |.|+++||++|
T Consensus 400 l~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W 479 (897)
T 2xdt_A 400 LNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTW 479 (897)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999999995 5 89999999999
Q ss_pred hcCCCcceEEEEEeCCEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCC
Q 002812 453 TKQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGD 529 (877)
Q Consensus 453 ~~~~g~P~l~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (877)
++|+|||+++|++++++++|+|+||..++.. ....|+|||+|.+.+.+....+|+..++.++.++. .+
T Consensus 480 ~~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~ 550 (897)
T 2xdt_A 480 TLQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV 550 (897)
T ss_dssp HSSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC
T ss_pred hcCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC
Confidence 9999999999999988999999999876532 24589999999876554445678877666665531 34
Q ss_pred CCceEEecCCceeEEEEEcCHHHHHHHHHHHHc--cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHH
Q 002812 530 NGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVL 607 (877)
Q Consensus 530 ~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w 607 (877)
+||++|.++.|||||+||+++|+.|+++|.. ..|++.+|||||+|+|+||++|.++|+.+|+|++||++|++|.||
T Consensus 551 --~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w 628 (897)
T 2xdt_A 551 --EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPV 628 (897)
T ss_dssp --SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHH
T ss_pred --ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHH
Confidence 7999999999999999999999999999975 369999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccChhHH---HHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 002812 608 SNLITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASK 684 (877)
Q Consensus 608 ~~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~a~~ 684 (877)
.++++.|..|.+++...+ .+ ..|++|+++++.++++++||+. ++++.++++|..++.+||.+|+++|++.|++
T Consensus 629 ~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~ 704 (897)
T 2xdt_A 629 FQGLNELIPMYKLMEKRD--MNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEG 704 (897)
T ss_dssp HHHHHHHHHHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCh--hhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999999999999987632 45 7899999999999999999987 6789999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccC
Q 002812 685 RFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS 764 (877)
Q Consensus 685 ~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~ 764 (877)
+|++|++++..+.||||+|.+|||+++ |++++|++||++|+++++++||..+|.||||++|+++|+++|++++++
T Consensus 705 ~f~~~~~~~~~~~i~~~lr~~vy~~~~-----g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~ 779 (897)
T 2xdt_A 705 YFRKWKESNGNLSLPVDVTLAVFAVGA-----QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKG 779 (897)
T ss_dssp HHHHHHHTTTCSCCCHHHHHHHHHHHT-----TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCcCCCCcchhhhEEEEec-----CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCC
Confidence 999999876556899999999998863 789999999999999999999999999999999999999999999975
Q ss_pred -cCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCC-chH
Q 002812 765 -EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCK-PYI 838 (877)
Q Consensus 765 -~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~-~~~ 838 (877)
.|+.||...++. ++.| |+.++|+|+++||+.|.++||++ +.+.+++..+++.|+|+++++++++||+.++. +..
T Consensus 780 ~~i~~qd~~~~~~~v~~n~~g~~~~~~~~~~n~~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~ 859 (897)
T 2xdt_A 780 DKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQ 859 (897)
T ss_dssp SSSCGGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHHTGGGTTT
T ss_pred CCCcHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccchh
Confidence 599999999998 8776 99999999999999999999854 67899999999999999999999999998643 356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 002812 839 ARTLRQSIERVQINAKWVESIRNEGHLAEAVKEL 872 (877)
Q Consensus 839 ~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~ 872 (877)
.+++++++|+|+.|++|++++.+. |.+||+++
T Consensus 860 ~~~~~~~le~i~~n~~w~~~~~~~--i~~wl~~~ 891 (897)
T 2xdt_A 860 LRCVQQTIETIEENIGWMDKNFDK--IRVWLQSE 891 (897)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHhh
Confidence 789999999999999999999999 99999987
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=1.8e-142 Score=1286.50 Aligned_cols=773 Identities=32% Similarity=0.557 Sum_probs=702.1
Q ss_pred ceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEecCCeEEEEEe
Q 002812 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVEADEILVLEF 93 (877)
Q Consensus 14 ~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l 93 (877)
|+|.||+|.|++++++.+|+|+|+| + ++++.|+||+.+|+|++|.+++ .+..+.++. +.++|.+
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g----------~~~~~~~~~--~~l~i~~ 64 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNG----------RDTAFTYDG--QTVRAPG 64 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETT----------EECCCEECS--SEEEECC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEec----------eeccEEEEC--CEEEEEe
Confidence 6899999999999999999999999 3 6789999999999999998853 122334443 3777766
Q ss_pred CCCcCCceEEEEEEEEeeecCCCcceEEeeeccCCeeeeeeeeccCCCCCCceeeccCCCCCceEEEEEEEeCCCCeEEc
Q 002812 94 AETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALS 173 (877)
Q Consensus 94 ~~~l~~g~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l~i~~p~~~~~~s 173 (877)
+ +|.++|+|.|+|.+++.+.|+|++.|. ++++.|||||.+||+||||||+|++||+|+|+|++|++|+|+|
T Consensus 65 ~----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lS 135 (780)
T 1z5h_A 65 D----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAIS 135 (780)
T ss_dssp C----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEE
T ss_pred C----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEe
Confidence 4 388999999999999999999999876 6789999999999999999999999999999999999999999
Q ss_pred CCcccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHHHHHHHHHHHHHHhC
Q 002812 174 NMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFA 253 (877)
Q Consensus 174 n~~~~~~~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg 253 (877)
||++.++ ..+++++++|+.+||||+|++||+||+|+.++..+. |+++++|++|+ ++++++++.+.+++++|+++||
T Consensus 136 N~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg 211 (780)
T 1z5h_A 136 NMPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFG 211 (780)
T ss_dssp SSCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHS
T ss_pred CCccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhC
Confidence 9998765 456788999999999999999999999999886554 89999999998 6779999999999999999999
Q ss_pred CCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccCcCchhhHhhHH
Q 002812 254 VPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGF 333 (877)
Q Consensus 254 ~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGf 333 (877)
+|||++|+|+|++|+|+.|||||||+++|+|..++++ +.++...++.++.+||||+|||||||+|||+||+|+||||||
T Consensus 212 ~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGf 290 (780)
T 1z5h_A 212 IPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESF 290 (780)
T ss_dssp SCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHH
T ss_pred CCCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHH
Confidence 9999999999999999999999999999999999998 667778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCcchhhHHHHHHHHH-HHhhhcccCCCCceeeecCCcchhhccccccccchhhHHHHHHHHhhCHHHH
Q 002812 334 ATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECF 412 (877)
Q Consensus 334 a~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F 412 (877)
|+|++++++++.+|+|.++.+|..... .++..|+..++||+..++.++.+++..|+.++|.||++|||||+..||++.|
T Consensus 291 A~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F 370 (780)
T 1z5h_A 291 ATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEF 370 (780)
T ss_dssp HHHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHH
Confidence 999999999999999998888876654 6788899999999999888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCCEEEEEEEeeccCCCCCCCeeEEEE
Q 002812 413 QRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPI 492 (877)
Q Consensus 413 ~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl 492 (877)
+++|+.|+++|+|++++++|||+++++++|.|+++||++|++|+|+|+++|++++++++|+|+||..++ ..+..|+|||
T Consensus 371 ~~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi 449 (780)
T 1z5h_A 371 RKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPV 449 (780)
T ss_dssp HHHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEE
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEE
Confidence 999999999999999999999999999999999999999999999999999998889999999998765 3345899999
Q ss_pred EEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHccCCChhhHHH
Q 002812 493 TLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFG 572 (877)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~ 572 (877)
++ +.++. .... +..+ ++.++. + +||++|.++.|||||+||+++|..|+++| ..|++.+|+|
T Consensus 450 ~~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~ 510 (780)
T 1z5h_A 450 NI-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIG 510 (780)
T ss_dssp EE-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHH
T ss_pred EE-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHH
Confidence 99 43332 2334 5543 344532 2 69999999999999999999999999998 4689999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccC
Q 002812 573 ILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK 652 (877)
Q Consensus 573 li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~ 652 (877)
||+|+|+|+++|.++++.+|+|+.||++|++|.||.++++.|..+.++ . +.|++|+++++.++++++| ..
T Consensus 511 li~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~ 580 (780)
T 1z5h_A 511 LVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK 580 (780)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC
Confidence 999999999999999999999999999999999999999999888765 2 2488999999999999999 32
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcC
Q 002812 653 PGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRET 732 (877)
Q Consensus 653 ~~~~~~~~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~ 732 (877)
+++.+..+|..++++||.+|+++|++ |+++|++| +.||||+|.+|||++++ +|++ |++|+++|+++
T Consensus 581 --~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~~~---~g~~--~~~l~~~~~~~ 646 (780)
T 1z5h_A 581 --QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAYAL---VTGD--LKGLLEKFRSV 646 (780)
T ss_dssp --CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHHHH---HTCC--HHHHHHHHHSC
T ss_pred --CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHHHH---cCcH--HHHHHHHHhcC
Confidence 78999999999999999999999999 99999998 25999999999887654 6776 99999999999
Q ss_pred CCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCcCCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCCcchHHH
Q 002812 733 DLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRF 809 (877)
Q Consensus 733 ~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~~~l~~~ 809 (877)
++++||..++.||||++|+++++++|++++++.++.||...++. ++.| |++++|+|+++||+.|.+++++.+.+.++
T Consensus 647 ~~~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~~ 726 (780)
T 1z5h_A 647 DRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRT 726 (780)
T ss_dssp CSHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHHHHHHHHHHHCSSSHHHHH
T ss_pred CCHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 99999999999999999999999999999986799999999988 8666 99999999999999999999866788999
Q ss_pred HHHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcCh
Q 002812 810 ISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNE 862 (877)
Q Consensus 810 v~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~ 862 (877)
+..+ +.++|++ ++++++||+.++.++..+++++++|+|+.|++|++++.+.
T Consensus 727 i~~~-~~~~t~~-~~~~~~f~~~~~~~~~~~~~~~~~e~i~~n~~w~~~~~~~ 777 (780)
T 1z5h_A 727 VEMM-IPVIGLD-HPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQT 777 (780)
T ss_dssp HHHH-HHHHHHH-CTTHHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhh-hccCCHH-HHHHHHHHccCCCccHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999 9999999 9999999998776778899999999999999999998765
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=2.4e-97 Score=896.82 Aligned_cols=723 Identities=18% Similarity=0.238 Sum_probs=576.5
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEecC
Q 002812 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVEA 85 (877)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (877)
.++|+|...+| ||+|+++++++...++|+++|++. .+++.|+||+.+ +|.+|++++. . ..+..+
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~----------~--~~~~~~ 72 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA----------A--ADYVLE 72 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE----------E--CCCEEE
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe----------e--cceEee
Confidence 56788876666 899999999988888888777643 447899999999 9999998531 1 223334
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEEeee--cCCCcceEEeeeccCCeeeeeeeeccCCCCCCceeeccCCCCCceEEEEEE
Q 002812 86 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 163 (877)
Q Consensus 86 ~~~l~i~l~~~l~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l~i 163 (877)
++.++|. +|++|.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|
T Consensus 73 ~~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itI 141 (867)
T 2gtq_A 73 GETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTI 141 (867)
T ss_dssp TTEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEE
T ss_pred CCEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEE
Confidence 5677775 45568999999999864 34668999874 27789999999999999999999999999999
Q ss_pred EeCCC-C-eEEcCCccccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecc--c--CCCeEEEEEEcCCccchHHH
Q 002812 164 DVPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--T--SDGIKVRVYCQVGKANQGKF 236 (877)
Q Consensus 164 ~~p~~-~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~--~--~~g~~v~v~~~~~~~~~~~~ 236 (877)
++|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|+.++.. + ..++++++|++|+..+.+++
T Consensus 142 t~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 221 (867)
T 2gtq_A 142 VADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGF 221 (867)
T ss_dssp EEETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHH
T ss_pred EEccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHH
Confidence 99997 6 899999988764 3567889999999999999999999999988742 2 23589999999999989999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhc
Q 002812 237 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 316 (877)
Q Consensus 237 ~l~~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 316 (877)
+++.+++++++|+++||+|||++|+++|++|+|..||||||||++|++..+++++..++...++.+..+||||+||||||
T Consensus 222 al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfG 301 (867)
T 2gtq_A 222 AVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTG 301 (867)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999988777777888999999999999999
Q ss_pred CccccCcCchhhHhhHHHHHHHHHHHhhhCcch-hhHHHHHHHHHHHhhhcccCCCCceeeecCCcchhhccccccccch
Q 002812 317 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRK 395 (877)
Q Consensus 317 nlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~K 395 (877)
|+|||+||+++|||||||+|++..+.....+.. ............++..|+...+||+.. .++.++++.|+.++|.|
T Consensus 302 nlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~K 379 (867)
T 2gtq_A 302 NRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEK 379 (867)
T ss_dssp TTBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHH
T ss_pred cEEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhH
Confidence 999999999999999999999988887766532 111111111113466788888999864 34566788899999999
Q ss_pred hhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEe--CC--EEE
Q 002812 396 GASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KLE 471 (877)
Q Consensus 396 g~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~--~~--~~~ 471 (877)
|++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|++. .+ +++
T Consensus 380 Ga~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~ 458 (867)
T 2gtq_A 380 GAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELT 458 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999996 79999999999999975 34 488
Q ss_pred EEEEeeccCCCCCCCeeEEEEEEEECc--ccc-----------eeeEEeeccceEEEecccccccccCCCCCCceEEecC
Q 002812 472 LEQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNV 538 (877)
Q Consensus 472 l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~ 538 (877)
|+|++|...+..+...|+|||++.+.+ +.. ...++++.++.++.++.+ ... .|+.+|.
T Consensus 459 l~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r 529 (867)
T 2gtq_A 459 VKQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLR 529 (867)
T ss_dssp EEEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEEST
T ss_pred EEEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecC
Confidence 999998655544455899999997643 211 123567777788888742 123 6999999
Q ss_pred CceeEEEEEcCHHHHHHHHHHHHccCCChhhHHHH---HHHHHHH-----HHcCCC-C-HHHHHHHHHhcc-CCC-cHHH
Q 002812 539 NQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTV 606 (877)
Q Consensus 539 ~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~E~-~~~~ 606 (877)
+..+++||+|+-..+. |...+.... ++.+|.+. +.|...+ +++|.. + ++.++++++++. +|+ ++.+
T Consensus 530 ~fs~~~~l~~~~~~~~-l~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 607 (867)
T 2gtq_A 530 GFSAPVHLNYPYSDDD-LLLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAF 607 (867)
T ss_dssp TCCSSCEEECCCCHHH-HHHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHH
T ss_pred CCCccEEEECCCCHHH-HHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHH
Confidence 9999999997655543 233333222 48888766 8888888 677866 7 889999998865 777 9999
Q ss_pred HHHHHH--HHHHHHHHHhccChhH----HHHHHH-HHHHH---HHHHHHHc-----C-CccCCCCCHHHHHHHHHHHHHH
Q 002812 607 LSNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTAL 670 (877)
Q Consensus 607 w~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lr~~i~~~a 670 (877)
|..++. .+..|...+..-++.. .+.+++ +...+ +.++|+++ | |+..+ ++...+.||..++.++
T Consensus 608 ~a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l 686 (867)
T 2gtq_A 608 KALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFV 686 (867)
T ss_dssp HHHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHH
Confidence 999998 5667766432222322 233444 44445 88888877 7 87654 7788899999999999
Q ss_pred HhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCC
Q 002812 671 ALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPD 750 (877)
Q Consensus 671 c~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d 750 (877)
|..| ++|++.|+++|++...+ .+..++.|| +++.. .+.++++.++.++++|+++....+|..++. ||+++
T Consensus 687 ~~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~~---~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~ 756 (867)
T 2gtq_A 687 LRAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNGN---ESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRR 756 (867)
T ss_dssp HHHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTTC---CSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCS
T ss_pred HhcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHhc---CcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCC
Confidence 9999 99999999999976433 334566677 33332 223567789999999998888888888777 68899
Q ss_pred HHHHHHHHHHhccC--cCC-cccceeeee-eccc
Q 002812 751 VNIVLEVLNFLLSS--EVR-SQDAVYGLA-VSIE 780 (877)
Q Consensus 751 ~~ll~~~L~~~l~~--~i~-~qd~~~~~~-v~~~ 780 (877)
|+++++++.++.++ +++ +++...++. ++.|
T Consensus 757 ~~~~~~v~~l~~~~~f~~~npn~~r~l~~~~~~n 790 (867)
T 2gtq_A 757 SDTLQQVRTALQHPKFSLENPNKARSLIGSFSRN 790 (867)
T ss_dssp TTHHHHHHHHTTSTTCCTTCHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHhhCcCCCcCCchHHHHHHHHHhhC
Confidence 99999999999887 444 444444444 4433
No 6
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=2e-88 Score=815.58 Aligned_cols=708 Identities=20% Similarity=0.249 Sum_probs=526.7
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEecC
Q 002812 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVEA 85 (877)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (877)
.++|+|...+| ||+|.++++++..+++|+++|++... +++.|+||+.+|+|.+|.+++. ... .++.+
T Consensus 32 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~----------~l~-~y~~~ 98 (891)
T 3b34_A 32 HDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE----------PWT-AWKEE 98 (891)
T ss_dssp GGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE----------ECC-SEEEE
T ss_pred hhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE----------Ecc-eEEee
Confidence 45677776665 89999999998889999988887655 5788999999999999998531 110 34444
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEEeee--cCCCcceEEeeeccCCeeeeeeeeccCCCCCCceeeccCCCCCceEEEEEE
Q 002812 86 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 163 (877)
Q Consensus 86 ~~~l~i~l~~~l~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l~i 163 (877)
++.|+|. +| |+.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|
T Consensus 99 ~~~L~I~---~l-p~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI 166 (891)
T 3b34_A 99 EGALVIS---NL-PERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKI 166 (891)
T ss_dssp TTEEEEC---SC-CSEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEE
T ss_pred CCEEEEE---eC-CCeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEE
Confidence 5678775 34 36899999999864 34568999874 27789999999999999999999999999999
Q ss_pred EeCCC-C-eEEcCCccccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecc--cC--CCeEEEEEEcCCccchHHH
Q 002812 164 DVPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKF 236 (877)
Q Consensus 164 ~~p~~-~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~--~~--~g~~v~v~~~~~~~~~~~~ 236 (877)
++|++ | +++|||+++++. ..+++++++|+.++|||+|++||+||+|+.++.. +. +++++++|++|+..+.+++
T Consensus 167 ~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 246 (891)
T 3b34_A 167 IADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPW 246 (891)
T ss_dssp EEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHH
T ss_pred EeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHH
Confidence 99997 6 899999988764 3677889999999999999999999999988742 22 3489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhc
Q 002812 237 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 316 (877)
Q Consensus 237 ~l~~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 316 (877)
+++.+.+++++||++||+|||++|+++|++|+|..|||||||+++|++..+++++..++...++.+..+||||+||||||
T Consensus 247 al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFG 326 (891)
T 3b34_A 247 AMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTG 326 (891)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999988777777888999999999999999
Q ss_pred CccccCcCchhhHhhHHHHHHHHHHHhhhCcch-hhHHHHHHHHH-HHhhhcccCCCCceeeecCCcchhhccccccccc
Q 002812 317 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 394 (877)
Q Consensus 317 nlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~ 394 (877)
|+|||+||+|+|||||||+|++..+.....+.. ..... ..... .++..|+...+||+.. .++.++++.|+.++|.
T Consensus 327 NlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~~~~~-~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 403 (891)
T 3b34_A 327 NRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINN-VRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVYE 403 (891)
T ss_dssp TTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHHH
T ss_pred CCCcccchhhceehHHHHHHHHHHHHHHHhCHHHHHHHH-HHHHHHhhhhhhccccCCCCcc--ccccccccccccchhh
Confidence 999999999999999999999988887776532 11111 11111 2366788888999864 2355678889999999
Q ss_pred hhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeC----C--
Q 002812 395 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E-- 468 (877)
Q Consensus 395 Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~----~-- 468 (877)
||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++++|+|+++|++++ +
T Consensus 404 KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~ 482 (891)
T 3b34_A 404 KGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQY 482 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCEE
Confidence 999999999999999999999999999999999999999999999999999985 799999999999998752 3
Q ss_pred EEEEEEEeeccCCCCCCCeeEEEEEEEECc--ccc----------eeeEEeeccceEEEecccccccccCCCCCCceEEe
Q 002812 469 KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKL 536 (877)
Q Consensus 469 ~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~ 536 (877)
+++|+|+|+...+......|+|||++.+.+ +.. ...++++.++.++.++.+ ... .|+.+
T Consensus 483 ~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~l 553 (891)
T 3b34_A 483 TLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPAL 553 (891)
T ss_dssp EEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEEE
T ss_pred EEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEEE
Confidence 589999998655444456899999997643 211 124677788888888742 123 69999
Q ss_pred cCCceeEEEEEcCHHHHHHHHHHHHccCCChhhHHHHHHHHHHHHH--------cCC-CC-HHHHHHHHHh-ccCCC-cH
Q 002812 537 NVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCM--------ARQ-QT-LTSLLTLMAS-YSEET-EY 604 (877)
Q Consensus 537 N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~--------~g~-l~-~~~~l~l~~~-l~~E~-~~ 604 (877)
|.+..|||||+||..+|.++.. +.. .-++.+|.+.+.+++.... .|. +. ...+++.+.. |..+. |.
T Consensus 554 ~~~~s~~~~v~~~~~~~~l~~~-l~~-d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (891)
T 3b34_A 554 LCEFSAPVKLEYKWSDQQLTFL-MRH-ARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDP 631 (891)
T ss_dssp STTCCSSCEEECCCCHHHHHHH-HHH-CSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCH
T ss_pred cCCCcceEEEeCCCCHHHHHHH-Hhh-CCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcCH
Confidence 9999999999999988877653 332 3357888887777766433 222 12 2446665544 33322 32
Q ss_pred HHHHHHHH--HHHHHHHHHhccChhHHHH--------HHHHHHHHHHHHHHHcCCccC---CCCCHHHHHHHHHHHHHHH
Q 002812 605 TVLSNLIT--ISYKIGRIAADARPELLDY--------LKQFFISLFQNSAEKLGWDSK---PGESHLDALLRGEIFTALA 671 (877)
Q Consensus 605 ~~w~~~~~--~l~~l~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~lg~~~~---~~~~~~~~~lr~~i~~~ac 671 (877)
..-..++. ....|...+..-+|+.... +..-+...+..+|+++- ... ..++.-.+.||..++..+|
T Consensus 632 ~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~ 710 (891)
T 3b34_A 632 ALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFLA 710 (891)
T ss_dssp HHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22222221 1223333322222332222 22223344466666653 211 1233456899999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 002812 672 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 751 (877)
Q Consensus 672 ~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~ 751 (877)
..+.++..+.|.+.|+.- + + --|-.. .+.+++..-....++..+...++++.....-+|--.+.| ++..+
T Consensus 711 ~~~~~~~~~~~~~~~~~a--~-n----mtd~~~-al~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa--~~~~~ 780 (891)
T 3b34_A 711 FGETHLADVLVSKQFHEA--N-N----MTDALA-ALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQA--TSPAA 780 (891)
T ss_dssp TSCHHHHHHHHHHHHHHC--S-S----HHHHHH-HHHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHH--TCCCT
T ss_pred hCCCchHHHHHHHHHhhC--C-C----hHHHHH-HHHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHh--CCCCc
Confidence 988777777888888752 1 1 112222 222332210012345566777777655444455555555 45555
Q ss_pred HHHHHHHHHhccC
Q 002812 752 NIVLEVLNFLLSS 764 (877)
Q Consensus 752 ~ll~~~L~~~l~~ 764 (877)
+.+.++-.+.-.+
T Consensus 781 ~~~~~v~~l~~h~ 793 (891)
T 3b34_A 781 NVLETVRGLLQHR 793 (891)
T ss_dssp THHHHHHHHTTCT
T ss_pred cHHHHHHHHhcCC
Confidence 5677666654444
No 7
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.2e-88 Score=811.39 Aligned_cols=704 Identities=19% Similarity=0.251 Sum_probs=508.5
Q ss_pred CCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEecCCeEEE
Q 002812 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVEADEILV 90 (877)
Q Consensus 11 p~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 90 (877)
|..+...||+|.+++++++..++|+++|++...++++.|+||+.+|+|.+|.+++. .+... ..+..+++.++
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~-------~l~~~-~~~~~~~~~L~ 82 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK-------KLVEG-EEYTYDNEFLT 82 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE-------ECCBT-TTEEECSSEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE-------EcCcc-cceEecCCEEE
Confidence 55688899999999999999999999999887666789999999999999998532 11110 02444567899
Q ss_pred EEeCCCcCCceEEEEEEEEeee--cCCCcceEEeeeccCCeeeeeeeeccCCCCCCceeeccCCCCCceEEEEEEEeCCC
Q 002812 91 LEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE 168 (877)
Q Consensus 91 i~l~~~l~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l~i~~p~~ 168 (877)
|.++. ++.+.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|++|++
T Consensus 83 I~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~ 153 (889)
T 3ebh_A 83 IFSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKE 153 (889)
T ss_dssp ECGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETT
T ss_pred EecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEccc
Confidence 98764 5445999999999985 34678999874 2788999999999999999999999999999999997
Q ss_pred -C-eEEcCCccccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecc-----cCCCeEEEEEEcCCccchHHHHHHH
Q 002812 169 -L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH-----TSDGIKVRVYCQVGKANQGKFALNV 240 (877)
Q Consensus 169 -~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~-----~~~g~~v~v~~~~~~~~~~~~~l~~ 240 (877)
| +++|||+++++. ..+++++++|..++|||+|++||+||+|+.++.. ...++++++|++|+..+.++++++.
T Consensus 154 ~~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~ 233 (889)
T 3ebh_A 154 KYPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALEC 233 (889)
T ss_dssp TCCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHH
T ss_pred cCeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHH
Confidence 8 579999988764 4677889999999999999999999999987642 2234899999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002812 241 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 320 (877)
Q Consensus 241 ~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 320 (877)
+++++++||++||+|||++|+++|++|+|..||||||||++|++..+++++..++...++.+..+||||+|||||||+||
T Consensus 234 ~~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT 313 (889)
T 3ebh_A 234 LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVT 313 (889)
T ss_dssp HHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBE
T ss_pred HHHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 99999999999999999999999999999999999999999999999999887777778889999999999999999999
Q ss_pred cCcCchhhHhhHHHHHHHHHHHhhhCcchh-hHHHHHHHHHHHhhhcccCCCCceeeecCCcchhhccccccccchhhHH
Q 002812 321 MEWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV 399 (877)
Q Consensus 321 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~v 399 (877)
|+||+|+|||||||+|++.++.....+... ...........++..|+...+||+.. .++.+++..|+.++|.||++|
T Consensus 314 ~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~v 391 (889)
T 3ebh_A 314 LRDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEV 391 (889)
T ss_dssp ESSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHH
T ss_pred ecccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHH
Confidence 999999999999999999887776654321 11111111113466788888899864 234567889999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhcc-------CCCHHHHHHHhhcCCCcceEEEEEeC----C
Q 002812 400 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E 468 (877)
Q Consensus 400 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~-------~~~l~~~~~~W~~~~g~P~l~v~~~~----~ 468 (877)
||||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|++. |++|++|+|+|+|+|++++ +
T Consensus 392 LrML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~ 470 (889)
T 3ebh_A 392 MRMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKK 470 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTT
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCC
Confidence 999999999999999999999999999999999999999999 999996 6899999999999999764 2
Q ss_pred --EEEEEEEeeccCCCCCCCeeEEEEEEEECcc---cc---eeeEEeeccceEEEecccccccccCCCCCCceEEecCCc
Q 002812 469 --KLELEQSQFLSSGSPGDGQWIVPITLCCGSY---DV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQ 540 (877)
Q Consensus 469 --~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~ 540 (877)
+++|+|.++...+......|+|||++...+. .. ...+.++.+++++.++.+. .. .+..+|.+.
T Consensus 471 ~~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~f 541 (889)
T 3ebh_A 471 QYSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGF 541 (889)
T ss_dssp EEEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTC
T ss_pred EEEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCC
Confidence 6899998876655555668999999977432 21 2346778888899987532 22 477899999
Q ss_pred eeEEEEEcC--HHHHHHHHHHHHccCCChhhHHHH--------HHHHHHHHHcC---------CCCH-HHHHHHHHhc-c
Q 002812 541 TGFYRVKYD--KDLAARLGYAIEMKQLSETDRFGI--------LDDHFALCMAR---------QQTL-TSLLTLMASY-S 599 (877)
Q Consensus 541 ~gyyRV~Yd--~~~w~~l~~~l~~~~i~~~~Ra~l--------i~D~~~la~~g---------~l~~-~~~l~l~~~l-~ 599 (877)
.+++|++|+ .+.+..|... +. ++.+|..- +-+...-...| .... ..+++.+..+ .
T Consensus 542 sa~v~l~~~~~~~~l~~l~~~---d~-d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 617 (889)
T 3ebh_A 542 SAPVYIEDQLTDEERILLLKY---DS-DAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLE 617 (889)
T ss_dssp CSSSEEECCCCHHHHHHHHHH---CS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHT
T ss_pred CceEEEeCCCCHHHHHHHHhh---CC-ChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHc
Confidence 999999976 5544443332 11 22333211 11111100111 1111 2234433332 2
Q ss_pred CC-CcHHHHHHHHHHH--HHHHHHHhccChhH--------HHHHHHHHHHHHHHHHHHcC------------CccCCCCC
Q 002812 600 EE-TEYTVLSNLITIS--YKIGRIAADARPEL--------LDYLKQFFISLFQNSAEKLG------------WDSKPGES 656 (877)
Q Consensus 600 ~E-~~~~~w~~~~~~l--~~l~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~lg------------~~~~~~~~ 656 (877)
.+ -|...-..++..- ..|...+..-+|+. ...+..-+...+..+|+++. +.. ..+.
T Consensus 618 ~~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 696 (889)
T 3ebh_A 618 DPHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQ 696 (889)
T ss_dssp CTTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHH
T ss_pred CCCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHH
Confidence 21 1222222221110 11111111001111 11111222222233333321 111 1234
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHH
Q 002812 657 HLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQ 736 (877)
Q Consensus 657 ~~~~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ 736 (877)
.-.+.||..++.++|..+.++..+.|.+.|+. . .-.-|-+.+.+++.. ...++..+...+++++..-.-
T Consensus 697 ~~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~--------a-nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~ 765 (889)
T 3ebh_A 697 MNMRTLRNTLLSLLSKAQYPNILNEIIEHSKS--------P-YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLL 765 (889)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHHHHHHHHTTC--------S-CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHHHhcCChhHHHHHHHHHhh--------c-ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchh
Confidence 56689999999999999988877777776642 1 223344444444432 122334566666666555555
Q ss_pred HHHHHHHHhCCCCC-HHHHHHHHH
Q 002812 737 EKTRILSSLASCPD-VNIVLEVLN 759 (877)
Q Consensus 737 ek~~~l~aL~cs~d-~~ll~~~L~ 759 (877)
+|--.+.|.+...| -+.++++++
T Consensus 766 dkwf~~qa~~~~~~~~~~v~~l~~ 789 (889)
T 3ebh_A 766 QEWLKTVSRSDRKDIYEILKKLEN 789 (889)
T ss_dssp HHHHHHHHTCCCTTHHHHHHHHHH
T ss_pred hHhHHHhhCCCCcCHHHHHHHHhc
Confidence 77777777554444 234444443
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=7.9e-82 Score=740.39 Aligned_cols=528 Identities=18% Similarity=0.280 Sum_probs=419.4
Q ss_pred CCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEec
Q 002812 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVE 84 (877)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (877)
..+|||..+.|.||+|.|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+....| ...+..+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g-----~~~~~~~~~~~ 92 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQG-----QWVKVNYDLAK 92 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTC-----CEEEECEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCC-----CccceeEEecC
Confidence 3479999999999999999999999999999999999886 79999999999999998832101 01122333332
Q ss_pred ----CCeEEEEEeCCCcCCceEEEEEEEEeeecCCCcceEEeee-ccCCeeeeeeeeccCCCCCCceeeccCCCCCceEE
Q 002812 85 ----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKATF 159 (877)
Q Consensus 85 ----~~~~l~i~l~~~l~~g~~~l~i~y~g~l~~~~~G~y~~~y-~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f 159 (877)
.++.++|.++ ++.++|+|.|+|.++. .|++...+ ..+|..++++.|||||.+||+||||||+|++||+|
T Consensus 93 ~~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf 166 (605)
T 3cia_A 93 RDDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTY 166 (605)
T ss_dssp ECSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEE
T ss_pred ccccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEE
Confidence 3467778764 3789999999998654 46654332 23566788889999999999999999999999999
Q ss_pred EEEEEeCCCCeEEcCCcccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHH
Q 002812 160 KITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALN 239 (877)
Q Consensus 160 ~l~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~ 239 (877)
+++|++|++|+|+|||....+...++ +++|+.++|||+|++||+||+|+..+ .|+++++|++|+..+.++++++
T Consensus 167 ~i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~ 240 (605)
T 3cia_A 167 TARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFD 240 (605)
T ss_dssp EEEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHST
T ss_pred EEEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHH
Confidence 99999999999998875433322333 68999999999999999999999876 3678999999999888999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEec-CCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCc
Q 002812 240 VAVKTLELYKEYFAVPYSLPKLDMIAIP-DFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 318 (877)
Q Consensus 240 ~~~~~l~~~e~~fg~~yp~~kld~v~~p-~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnl 318 (877)
.+.+++++|+++|| |||++|+|+|++| +|+.|||||||+ +|.+..++.++. .+..+||||+|||||||+
T Consensus 241 ~~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnl 310 (605)
T 3cia_A 241 DTQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNL 310 (605)
T ss_dssp THHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTT
T ss_pred HHHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhccc
Confidence 99999999999999 9999999999995 999999999997 566666776543 145799999999999999
Q ss_pred cccCcCchhhHhhHHHHHHHHHHHhhhCcchhh--HHHHHHHHH-HHhhhccc-CCCCceeeecCCcchhhccccccccc
Q 002812 319 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYR 394 (877)
Q Consensus 319 Vt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~-~~~~p~~~~~~~~~~~~~~f~~i~Y~ 394 (877)
||++||+|+|||||||+|++++++++.+|++.. ...+....+ ..+ +.+ ..++|+..++. ..+++..|+.++|.
T Consensus 311 VT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~ 387 (605)
T 3cia_A 311 VTNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYV 387 (605)
T ss_dssp EEESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHH
T ss_pred cccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchh
Confidence 999999999999999999999999999887532 111111111 222 444 66789776554 24567789999999
Q ss_pred hhhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC----CHHH-HHHHhhcCCCcceEEEEEeCCE
Q 002812 395 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEK 469 (877)
Q Consensus 395 Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~----~l~~-~~~~W~~~~g~P~l~v~~~~~~ 469 (877)
||++||+||+..+|++.|+++|+.|+++|++++++++|||+++++++|. ++.. +|++|++++|+|+++|+.+.+.
T Consensus 388 KGa~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~ 467 (605)
T 3cia_A 388 KGQLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNA 467 (605)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHH
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchH
Confidence 9999999999999999999999999999999999999999999999874 5655 7999999999999987654310
Q ss_pred EEEEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCCceeEEEEEcC
Q 002812 470 LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYD 549 (877)
Q Consensus 470 ~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd 549 (877)
+. + ...-..-|+.... ....+.|++|+
T Consensus 468 ~~--~------------------------~~~l~~~w~~~~~---------------------------~~~~~~~~~~~ 494 (605)
T 3cia_A 468 FK--V------------------------IDKQINQLVTDEL---------------------------TLEQLPTAQWT 494 (605)
T ss_dssp HH--H------------------------HHHHTCCTTTTSS---------------------------CCSCSGGGGCC
T ss_pred HH--H------------------------HHHHHHHHHhcCC---------------------------CccccchhhCC
Confidence 00 0 0000000111100 00112389999
Q ss_pred HHHHHHHHHHHHccCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHH
Q 002812 550 KDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRI 620 (877)
Q Consensus 550 ~~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~ 620 (877)
..+|..+.+.|.. .|+ .+|+++|||+|+|+.++.. ++.++.++++.++.++.+|..+...|..+.++
T Consensus 495 ~~~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr~ 561 (605)
T 3cia_A 495 LHEWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMAKYLKSIGRR 561 (605)
T ss_dssp SHHHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHHHHHHHcCCc
Confidence 9999999999976 788 9999999999998877654 68899999999999999999988877665443
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=3.2e-80 Score=727.13 Aligned_cols=448 Identities=25% Similarity=0.389 Sum_probs=384.8
Q ss_pred CCcCCCCc-eeeEEEEEEEecCCCCeEEEEEEEEEEEECC-CCEEEEEeCCceeeEEEEeeccCcCCccccc-ceeEEEe
Q 002812 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKQALE-PTKVELV 83 (877)
Q Consensus 7 ~~rLp~~~-~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~-~~~~~~~ 83 (877)
.+..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+++.. +. ......+
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~-------~~~~~~~~~~ 78 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQE-------VKYALGERQS 78 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEE-------CCEEECCCCG
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEE-------cceecccccc
Confidence 45678776 7999999999999999999999999999887 5899999999999999985421 11 0011123
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeec-cCCeeeeeeeeccCCCCCCceeeccCCCCCceEEEE
Q 002812 84 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 161 (877)
Q Consensus 84 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~-~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l 161 (877)
..++.++|.++.+|.+| .++|+|.|+|+++.. |++...+. .+|..++++.|||||.+||+||||||+|++||+|++
T Consensus 79 ~~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i 156 (608)
T 3u9w_A 79 YKGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTA 156 (608)
T ss_dssp GGCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEE
T ss_pred ccCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEE
Confidence 45678999999999999 999999999987554 45544443 357778899999999999999999999999999999
Q ss_pred EEEeCCCCeEEcCCcccceee---cCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHH
Q 002812 162 TLDVPSELVALSNMPVIDEKV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFAL 238 (877)
Q Consensus 162 ~i~~p~~~~~~sn~~~~~~~~---~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l 238 (877)
+|++|++++|+|||++.++.. ++++++++|..++|||+||+||+||+|+..+ .|+++++|++|+..+.+++++
T Consensus 157 ~I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~~~ 232 (608)
T 3u9w_A 157 EVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAYEF 232 (608)
T ss_dssp EEEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHHHT
T ss_pred EeeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHHHH
Confidence 999999999999999876532 3568899999999999999999999998765 367889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcC
Q 002812 239 NVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 317 (877)
Q Consensus 239 ~~~~~~l~~~e~~fg~~yp~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 317 (877)
+.+.++|++||++|| |||++++++|++ |+|+.||||||||++++++.++.+.. +..+||||+|||||||
T Consensus 233 ~~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGn 302 (608)
T 3u9w_A 233 SETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGN 302 (608)
T ss_dssp TTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTT
T ss_pred HHHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcC
Confidence 999999999999999 999999999888 79999999999999999996655443 4568999999999999
Q ss_pred ccccCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HHhhhcccCCCCceeeecCCcchh--hccccccccc
Q 002812 318 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAISYR 394 (877)
Q Consensus 318 lVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~--~~~f~~i~Y~ 394 (877)
+||++||+|+|||||||+|++++++++++|++.....+..... .....|.+..+||+..++.++.++ +..|+.++|.
T Consensus 303 lVT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~ 382 (608)
T 3u9w_A 303 LVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYE 382 (608)
T ss_dssp TEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHH
T ss_pred cCccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHh
Confidence 9999999999999999999999999999998766555544433 334567788899988877666554 4579999999
Q ss_pred hhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----HHHhhcCCCcceEEEEEeC--
Q 002812 395 KGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE-- 467 (877)
Q Consensus 395 Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~~~W~~~~g~P~l~v~~~~-- 467 (877)
||+++||||+..|| ++.|+++||.|+++|+|++++++|||+++++++|.+++.+ |++|++++|+|+|+|+++.
T Consensus 383 KGa~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~ 462 (608)
T 3u9w_A 383 KGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTL 462 (608)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeecccc
Confidence 99999999999998 7889999999999999999999999999999999999888 9999999999999998765
Q ss_pred --CEEEEEEEee
Q 002812 468 --EKLELEQSQF 477 (877)
Q Consensus 468 --~~~~l~Q~rf 477 (877)
+.+.++|+++
T Consensus 463 ~~~~~~l~q~~~ 474 (608)
T 3u9w_A 463 TNACIALSQRWI 474 (608)
T ss_dssp THHHHHHHHHHH
T ss_pred ccceeeHHhHHh
Confidence 2466667543
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=1.5e-79 Score=722.89 Aligned_cols=528 Identities=18% Similarity=0.283 Sum_probs=410.3
Q ss_pred CCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECC----CCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEE
Q 002812 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVEL 82 (877)
Q Consensus 7 ~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~ 82 (877)
.+|+|..+.|.||+|.|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+++ ....+..
T Consensus 21 ~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g----------~~~~~~~ 90 (632)
T 2xq0_A 21 TLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDG----------SKADFQI 90 (632)
T ss_dssp CCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETT----------EECCEEE
T ss_pred cccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECC----------eecceEE
Confidence 479999999999999999999999999999999999877 89999999999999998842 1122333
Q ss_pred ec----CCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeee-ccCCeeeeeeeeccCCCCCCceeeccCCCCCc
Q 002812 83 VE----ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACK 156 (877)
Q Consensus 83 ~~----~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y-~~~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~k 156 (877)
+. .++.++|.++++ | .++|+|.|+|.++. .|++.... ..+|. ++++.|||||.+||+||||||+|++|
T Consensus 91 ~~~~~~~~~~l~I~l~~~---g~~~~l~I~Y~g~~~~--~gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~K 164 (632)
T 2xq0_A 91 EQRKEPLGSRLVINNASC---NDNFTLNIQFRTTDKC--TALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVK 164 (632)
T ss_dssp CCCBTTTBCCEEEECCCS---SSEEEEEEEEEECTTC--SSEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCC
T ss_pred cccccccCcEEEEEecCC---CCEEEEEEEEeeecCc--CcceeecccccCCC-ceEEEeccccCCcceeeeecCCcccc
Confidence 32 356788998776 6 99999999998765 35543222 22455 78889999999999999999999999
Q ss_pred eEEEEEEEeCCCCeEEcCCcccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHH
Q 002812 157 ATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKF 236 (877)
Q Consensus 157 a~f~l~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~ 236 (877)
|+|+++|++| ++|++||.++.+...++ .+++|+.++|||+|++||+||+|+..+. |+++++|++|+..+.+++
T Consensus 165 atf~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~ 237 (632)
T 2xq0_A 165 STFTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQW 237 (632)
T ss_dssp EEEEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHH
T ss_pred eEEEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHH
Confidence 9999999999 98886654433322122 2789999999999999999999998762 567999999998888889
Q ss_pred HHH-HHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 002812 237 ALN-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 314 (877)
Q Consensus 237 ~l~-~~~~~l~~~e~~fg~~yp~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 314 (877)
+++ .+.+++++|+++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ....+||||+||||
T Consensus 238 ~~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqW 307 (632)
T 2xq0_A 238 EFENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSW 307 (632)
T ss_dssp HHTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHH
Confidence 998 99999999999999 999999999999 59999999999985 55555665543 14579999999999
Q ss_pred hcCccccCcCchhhHhhHHHHHHHHHHHhhhCcchhh--HHHHHHHHH-HHhhhcccCCCCc---eeeecCCcchhhccc
Q 002812 315 FGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIF 388 (877)
Q Consensus 315 fGnlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---~~~~~~~~~~~~~~f 388 (877)
|||+||++||+|+|||||||+|++++++++.+|++.. ...+..... .+ +|++..++| +...+.++.+++..|
T Consensus 308 fGnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f 385 (632)
T 2xq0_A 308 SGNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAF 385 (632)
T ss_dssp BTTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGC
T ss_pred hcCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhc
Confidence 9999999999999999999999999999999998642 211111111 22 255556678 434443345667889
Q ss_pred cccccchhhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCChHHHHHHHHhccC---CCHHH-HHHHhhcCCCcceEEE
Q 002812 389 DAISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISV 463 (877)
Q Consensus 389 ~~i~Y~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~---~~l~~-~~~~W~~~~g~P~l~v 463 (877)
+.++|.||++|||||+..||+ +.|+++|+.|+++|+|++++++|||+++++++| .+++. +|++|++++|+|+ ++
T Consensus 386 ~~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~ 464 (632)
T 2xq0_A 386 STVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RP 464 (632)
T ss_dssp SSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CC
T ss_pred cchhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-Cc
Confidence 999999999999999999999 999999999999999999999999999999987 46776 7999999999999 76
Q ss_pred EEeCCE----EEEEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCC
Q 002812 464 KVKEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 539 (877)
Q Consensus 464 ~~~~~~----~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 539 (877)
+.+.+. ..+ +.| |....+ ..... .. .+ . .++. . ++-
T Consensus 465 ~~~~~~~~~~~~l-~~~-----------w~~~~~---~~~~~-~~--~~--~---~~~~---------~---d~~----- 504 (632)
T 2xq0_A 465 HFITALADNVYQL-ADK-----------WVEMAQ---HLKTT-ED--FR--S---EFNA---------I---DIK----- 504 (632)
T ss_dssp CCCCHHHHHHHHH-HHH-----------HHHHTT---TCCSH-HH--HH--H---HCCG---------G---GGT-----
T ss_pred CCCchHHHHHHHH-HHH-----------HHhccc---ccccc-cc--cc--c---CCCH---------H---HHh-----
Confidence 544310 011 111 211000 00000 00 00 0 0110 1 111
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHcc------------CCChhhHHHHHHHHHH--HHHcCCCCHHHHHHHHHhccCCCcHH
Q 002812 540 QTGFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEYT 605 (877)
Q Consensus 540 ~~gyyRV~Yd~~~w~~l~~~l~~~------------~i~~~~Ra~li~D~~~--la~~g~l~~~~~l~l~~~l~~E~~~~ 605 (877)
+|+...|..+.+.|..+ .|+ .+|+++|||+|+ |+.++ +.++.++.++++.++....
T Consensus 505 -------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~--n~ei~~~~~~~~~~~~~~~ 574 (632)
T 2xq0_A 505 -------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQ--NAEVVFKMFKFQIFAKLQE 574 (632)
T ss_dssp -------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCC--CHHHHHHHHHHHHHTTCGG
T ss_pred -------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCc--CHHHHHHHHHHHHhcCChh
Confidence 77899999999998742 366 889999999998 65555 4488999999998999999
Q ss_pred HHHHHHHHHHHHHHH
Q 002812 606 VLSNLITISYKIGRI 620 (877)
Q Consensus 606 ~w~~~~~~l~~l~~~ 620 (877)
+|..+...|..+.++
T Consensus 575 ~~~~~~~~l~~~gr~ 589 (632)
T 2xq0_A 575 EYKHLADWLGTVGRM 589 (632)
T ss_dssp GHHHHHHHTTTCCCH
T ss_pred HHHHHHHHHHHcCCe
Confidence 999988877655444
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-73 Score=641.13 Aligned_cols=398 Identities=22% Similarity=0.381 Sum_probs=356.8
Q ss_pred CcceEEEEEeCCEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCce
Q 002812 457 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 533 (877)
Q Consensus 457 g~P~l~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 533 (877)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|++++.+....+||+.++.++.++. ++ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999986543 23589999999987655445678877766666532 44 79
Q ss_pred EEecCCceeEEEEEcCHHHHHHHHHHHHc--cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHH
Q 002812 534 IKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 611 (877)
Q Consensus 534 i~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~ 611 (877)
|++|.+++||||||||+++|++|+++|.. ..||+.||+|||+|+|+||++|+++|+.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 99999999999999999999999999975 4899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh
Q 002812 612 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 690 (877)
Q Consensus 612 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~ 690 (877)
+.|..|.+++...+ ++.+..|++|+++++.|+++++||+. ++++.++++|..++.+||.+|+++|+++|+++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 45789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCc-CCcc
Q 002812 691 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQ 769 (877)
Q Consensus 691 ~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~~~-i~~q 769 (877)
+++..+.||||+|.+|||++++ . +++|++||++|+++++++||..++.||||++|+++++++|+++++++ ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~~---~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGAQ---S--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHTT---S--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeeeC---C--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 8754447999999999998754 3 88999999999999999999999999999999999999999999886 6999
Q ss_pred cceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCch-HHHHHHH
Q 002812 770 DAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKPY-IARTLRQ 844 (877)
Q Consensus 770 d~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~~~-~~~~~~~ 844 (877)
|...++. ++.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++.++ ..+++++
T Consensus 303 D~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e~~~Ff~~~~~~~~~~~~~~q 382 (419)
T 3rjo_A 303 EFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQ 382 (419)
T ss_dssp GHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHTTTTC-CCCHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9999998 8877 99999999999999999999854 7899999999999999999999999999987654 6799999
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHhhc
Q 002812 845 SIERVQINAKWVESIRNEGHLAEAVKELAY 874 (877)
Q Consensus 845 ~le~i~~ni~W~~~~~~~~~i~~wl~~~~~ 874 (877)
++|+|+.|++|++++.+. |.+||+++..
T Consensus 383 ale~i~~ni~W~~~~~~~--v~~wL~~~~~ 410 (419)
T 3rjo_A 383 TIETIEENIGWMDKNFDK--IRVWLQSEKL 410 (419)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhhH
Confidence 999999999999999999 9999988743
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.95 E-value=1.8e-27 Score=275.45 Aligned_cols=297 Identities=14% Similarity=0.152 Sum_probs=202.2
Q ss_pred CceEEEEEEEeCCC---CeEEcCCcccceeecCCeEEEEEEeCC---CCcceEEEEEEeeeeeeecccCCCeEEEEEEcC
Q 002812 155 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTVSYQESP---IMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 228 (877)
Q Consensus 155 ~ka~f~l~i~~p~~---~~~~sn~~~~~~~~~~~~~~~~f~~t~---~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~ 228 (877)
...+++++|..|++ |.+.+.++....... +.. +|.... -+.+ -+.+|+|...+- +..|+++++....
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~--~f~a~~yd~LvDs---Pv~~G~~~~~~~-~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SWG--CFRADNYDALIDY---PFLIGDLTIEEF-IAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SSE--EEEESSHHHHTTC---CEEEESCEEEEE-EETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cce--EEEcCCHHHHhcc---hhcccCcEEEEe-ccCCeEEEEEEEc
Confidence 34668999999999 999888876543211 222 233210 0111 145789987663 4568888876554
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccce--eeecccccccCCCChhHHHHHHHHH
Q 002812 229 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAANKQRVATV 305 (877)
Q Consensus 229 ~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~-p~~~~g~mE~~gli--~~~e~~ll~~~~~~~~~~~~~~~~~ 305 (877)
......+..+..+++++++++++|| |||+++++++.. ++...|||||.+.. ++++..+.......+.........+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4444568888999999999999999 999999999865 45688999998864 4565533322221233455667899
Q ss_pred HHHHHHHHHhcCcccc-----------CcCchhhHhhHHHHHHHHHHHhhhC--cchhhHHHHHHHHHHHhhhcccCCCC
Q 002812 306 VAHELAHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLRLDGLAESH 372 (877)
Q Consensus 306 iaHElaHqWfGnlVt~-----------~~w~d~WL~EGfa~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~ 372 (877)
++||++|||||+.|+| +||+++||+||||+|++.++..... ....... .+......+........+
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~-~l~~~i~~~~~~~gr~~~ 349 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLK-LLGDTLSRVERGAGQYQQ 349 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHH-HHHHHHHHHHHSGGGGTC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHH-HHHHHHHHhhcCCCcccc
Confidence 9999999999988865 4579999999999999988775532 2211111 111212122111111222
Q ss_pred ceeeec-------CCcchhhccccccccchhhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCChHHHHHHHH
Q 002812 373 PIEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALE 438 (877)
Q Consensus 373 p~~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~ 438 (877)
|+.... ..+++.........|.||++|++||+..|++ +.|+++||.|+++|.. ++++++||.++++
T Consensus 350 sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e 429 (597)
T 4fgm_A 350 SVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLN 429 (597)
T ss_dssp CHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHH
T ss_pred ChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHH
Confidence 222100 0111111112234699999999999888865 4799999999999874 6889999999999
Q ss_pred hccCCCHHHHHHHhhcCCCcce
Q 002812 439 EGSGEPVNKLMNSWTKQKGYPV 460 (877)
Q Consensus 439 ~~~~~~l~~~~~~W~~~~g~P~ 460 (877)
+++|.|+.+|+++|+++++.|-
T Consensus 430 ~~sG~dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 430 QYPGIDISDFLKDALYNKESLS 451 (597)
T ss_dssp TSTTCCCHHHHHHHHHSCSCCC
T ss_pred HhcCcCHHHHHHHHHhCCCCcc
Confidence 9999999999999999998753
No 13
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=82.72 E-value=2.3 Score=49.86 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=57.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCCCC------CCccEEEecCC---CC-----c-ccccccceeeeccc-ccccCCCCh
Q 002812 232 NQGKFALNVAVKTLELYKEYFAVPYSL------PKLDMIAIPDF---AA-----G-AMENYGLVTYRETA-LLYDDQHSA 295 (877)
Q Consensus 232 ~~~~~~l~~~~~~l~~~e~~fg~~yp~------~kld~v~~p~~---~~-----g-~mE~~gli~~~e~~-ll~~~~~~~ 295 (877)
++++.+...++..=..|...+|...|. .++++|+..+- .. | .-.|-|+-+-+... +-|... .
T Consensus 338 ~~~~~~~~a~k~~e~~Fh~vl~t~~p~~~~~~~~~L~Vvvf~s~~dY~~~~~lfg~~TdNGG~YleG~~~f~aYe~~--~ 415 (785)
T 2y3u_A 338 EKIKRLYWASREVKSQFHRVVGNDKALEVGNADDVLTMKIFNSPEEYKFNTNINGVSTDNGGLYIEPRGTFYTYERT--P 415 (785)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCSCSSSSCGGGSEEEEEESSHHHHTHHHHHHCCCCSSSCEEEGGGTEEEEECCC--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCeEEEEEECCHHHHhhcccccCCcCCCceEEEeCCceEEEEecc--C
Confidence 445555555555556678888876765 36888887431 10 0 11222311111110 111110 0
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCccccCcCc---------hhhHhhHHHHHHHHH
Q 002812 296 AANKQRVATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 340 (877)
Q Consensus 296 ~~~~~~~~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfa~y~~~~ 340 (877)
......+..++.||++|.-=|-..-+..|. -.|+.||||+||+..
T Consensus 416 ~~si~nLee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 416 QQSIFSLEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp TTCSSCHHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ccceEeecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 001112345789999999855444444443 579999999999854
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=81.31 E-value=52 Score=33.78 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCccccc--c--cceeeecccccccCCCChhHHHHHHHHHHHHH
Q 002812 234 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 309 (877)
Q Consensus 234 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 309 (877)
+-.|.-.+.++.+||.+.|| .-++. ..++..-.+.. ..+| | ..++|....-.+.+. .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id-~~l~~~Vhyg~-~y~NAfWdG~~M~fGDG~~~~~p~--------~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLT-HKLYMKVHYGR-SVENAYWDGTAMLFGDGATMFYPL--------VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEESCTT-TCCCEEECSSCEEECCCCSSBSCS--------CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCC-CceEEEEecCC-CccCcEecCcEEEeeCCCcccccc--------cccceeeec
Confidence 34455577899999999999 56765 24444333321 2222 2 233443321111111 125789999
Q ss_pred HHHHHhcCccccCcCchhh-HhhHHHHHHHHHHH
Q 002812 310 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 342 (877)
Q Consensus 310 laHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~~ 342 (877)
++|--........-..+.- |||||+..++..+.
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 9998877765555444444 89999999996643
No 15
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=81.16 E-value=4.6 Score=41.61 Aligned_cols=107 Identities=23% Similarity=0.335 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCC-cccccccceeeecccccccCCCChh-HHHHHHHHHHHHH
Q 002812 234 GKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-GAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 309 (877)
Q Consensus 234 ~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~p~~~~-g~mE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 309 (877)
+-.|...+..+.+||.+.|| .-++.- ..++..=.+.. ++-.++.-.++..+.+.|....... .....-..+++||
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NAfWdg~~m~fGdGdg~~f~~~~~~lDVv~HE 145 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHE 145 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCcEEcCCEEEEEcCCCcccCCcccccceeeee
Confidence 33466678899999999999 556642 33433222211 1001111112222223332221000 0000124789999
Q ss_pred HHHHHhcCccccCcCchhh-HhhHHHHHHHHHH
Q 002812 310 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLA 341 (877)
Q Consensus 310 laHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~ 341 (877)
++|--........--.+.. |||||+..++...
T Consensus 146 ~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 146 ITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 9997655444443333333 8999999999753
No 16
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.20 E-value=2.7 Score=36.21 Aligned_cols=68 Identities=19% Similarity=0.220 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcc--ccc---ccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 002812 240 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGA--MEN---YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 314 (877)
Q Consensus 240 ~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~--mE~---~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 314 (877)
...++++-+.+..|++. ++ +..+++-...| +.. -+.|.+... ++- ......++.++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~--v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~------~l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PT--VAIYDSADINAFATGAKRDDSLVAVSTG-LLH------NMTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CE--EEEECCSSEEEEEECCC--CCEEEEEHH-HHH------HSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--Ce--EEEEECCCcCEEEEecCCCCCEEEEcHH-HHh------hCCHHHHHHHHHHHHHHHH
Confidence 34555556666777653 44 44444322222 221 133544443 221 1134568999999999976
Q ss_pred hcCc
Q 002812 315 FGNL 318 (877)
Q Consensus 315 fGnl 318 (877)
-++.
T Consensus 96 ~~h~ 99 (107)
T 3cqb_A 96 NGDM 99 (107)
T ss_dssp TTCE
T ss_pred CCCH
Confidence 5543
No 17
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=73.12 E-value=25 Score=36.15 Aligned_cols=108 Identities=24% Similarity=0.255 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEe---cCCCCcccccccceeeeccc-ccccCCCChhHHHHHHHHHH
Q 002812 233 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 306 (877)
Q Consensus 233 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~---p~~~~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 306 (877)
.+..|...+.++.+||.+.|| .-++.- +.++.. ..-...|.=+...++|..-. ..+.+-. .-..++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAFS-------GDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCGG-------GSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCccccccc-------cccchh
Confidence 355577788999999999999 566642 333332 11111232333345554421 1111110 124789
Q ss_pred HHHHHHHHhcCccccCcCchh-hHhhHHHHHHHHHHHhhhCcchhh
Q 002812 307 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAADSLFPEWKI 351 (877)
Q Consensus 307 aHElaHqWfGnlVt~~~w~d~-WL~EGfa~y~~~~~~~~~~~~~~~ 351 (877)
+||++|--........--.+. =|||+|+..+...+- .++|.+
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWli 176 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLV 176 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCcee
Confidence 999999765544333322222 389999999997765 245544
No 18
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=71.82 E-value=12 Score=38.60 Aligned_cols=102 Identities=19% Similarity=0.131 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCC--CccEEEecCCC---Ccccccccceeeeccc-ccccCCCChhHHHHHHHHHH
Q 002812 233 QGKFALNVAVKTLELYKEYFAVPYSLP--KLDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 306 (877)
Q Consensus 233 ~~~~~l~~~~~~l~~~e~~fg~~yp~~--kld~v~~p~~~---~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 306 (877)
.+..|...+..+.+||.+.|| .-++. -+.++..=.+. ..|.=+...++|..-. ..+.+-. .-..++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLS-------GGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCGG-------GCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCccccccc-------ccccce
Confidence 345677788999999999999 56664 23444332221 1222223344444421 1111110 124789
Q ss_pred HHHHHHHHhcCccccCcCchh-hHhhHHHHHHHHHHH
Q 002812 307 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 342 (877)
Q Consensus 307 aHElaHqWfGnlVt~~~w~d~-WL~EGfa~y~~~~~~ 342 (877)
+||+.|--........--.+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999765544333332333 389999999986654
No 19
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=70.43 E-value=32 Score=35.97 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCCccccc--c--cceeeeccc-ccccCCCChhHHHHHHHHH
Q 002812 233 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMEN--Y--GLVTYRETA-LLYDDQHSAAANKQRVATV 305 (877)
Q Consensus 233 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~p~~~~g~mE~--~--gli~~~e~~-ll~~~~~~~~~~~~~~~~~ 305 (877)
.+..+...+..+.+||.+.|| .-++.- ..++..=.+.. ..+| | ..++|..-. ..+.+-. .-..+
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~-~y~NAfWdG~~M~fGDG~g~~f~~~~-------~~lDV 159 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYGK-EYQNAFWNGQQMVFGDGDGEIFNRFT-------IAIDV 159 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCSS-SCCCEEECSSCEEECCCCSSSBCCTT-------SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecCC-CccCceecCcEeEeeCCCCcccCCcc-------cchhh
Confidence 345566678899999999999 445532 33443322211 1121 2 133333221 0111100 12478
Q ss_pred HHHHHHHHHhcCccccCcCchhh-HhhHHHHHHHHHHH
Q 002812 306 VAHELAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 342 (877)
Q Consensus 306 iaHElaHqWfGnlVt~~~w~d~W-L~EGfa~y~~~~~~ 342 (877)
++||++|--.........-.+.- |||||+.+|+..+.
T Consensus 160 v~HEltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 160 VGHALAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 99999997665444443333433 99999999997653
No 20
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=67.35 E-value=16 Score=45.11 Aligned_cols=191 Identities=15% Similarity=0.145 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHccCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHh-cc---CCCcHHHHHHHHHHHHHHHHHHhcc-
Q 002812 550 KDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS-YS---EETEYTVLSNLITISYKIGRIAADA- 624 (877)
Q Consensus 550 ~~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~-l~---~E~~~~~w~~~~~~l~~l~~~~~~~- 624 (877)
......|.+.+..++++..+.++++.-+.++. . +-...++.+.- +. ...+..+|.+++-.+..+-+.+...
T Consensus 355 ~~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~---~-Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~ 430 (1056)
T 1lsh_A 355 SEALLFLKRTLASEQLTSAEATQIVASTLSNQ---Q-ATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANT 430 (1056)
T ss_dssp HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC---C-CCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHhhccC---C-CCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccC
Confidence 34556666667778898888777777444332 2 33333443332 22 2356778888877777766554322
Q ss_pred ---ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCC--CCCCCC
Q 002812 625 ---RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLP 699 (877)
Q Consensus 625 ---~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~~~~--~~~~i~ 699 (877)
+++....+.+++. ..+++ + + ..-+...+..++.+|++..+. .+..++.+. .....|
T Consensus 431 ~~c~~~~v~~i~~~l~----~~~~~-------~-~---~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~ 491 (1056)
T 1lsh_A 431 VSCPDELLQPLHDLLS----QSSDR-------A-K---EEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYS 491 (1056)
T ss_dssp SSCCGGGTHHHHHHHH----HHHHT-------T-C---HHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSC
T ss_pred CCCCHHHHHHHHHHHH----HHHhc-------C-C---hHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccc
Confidence 1222223333322 22211 1 1 233456777788888886544 344555431 112345
Q ss_pred cchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHH-HHH-HHHHhCCCCCHHHHHHHHHHhcc
Q 002812 700 PDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE-KTR-ILSSLASCPDVNIVLEVLNFLLS 763 (877)
Q Consensus 700 ~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~e-k~~-~l~aL~cs~d~~ll~~~L~~~l~ 763 (877)
..+|.+...++-+....-....-+-++..|.+...+.| |.. ++..|-|.++...++++.+.+..
T Consensus 492 ~rvr~aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~ 557 (1056)
T 1lsh_A 492 TRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRR 557 (1056)
T ss_dssp HHHHHHHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhh
Confidence 56664333333221111112356678888876654444 444 33344467788888887776654
No 21
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=64.74 E-value=37 Score=34.82 Aligned_cols=99 Identities=15% Similarity=0.152 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCC---CcccccccceeeecccccccCCCChhHHHHHHHHHHHHHH
Q 002812 234 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 310 (877)
Q Consensus 234 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~p~~~---~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 310 (877)
+..|.-.+..+.+||.+.|| .-|+. ..++..-.+. ..|.=+...++|..-.-.+.+- . -..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~-~-------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL-V-------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS-C-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc-c-------ccchhhhhh
Confidence 44455577899999999999 56665 3444332221 1222233345554432211111 1 247899999
Q ss_pred HHHHhcCccccCcC-chhhHhhHHHHHHHHHHH
Q 002812 311 AHQWFGNLVTMEWW-THLWLNEGFATWVSYLAA 342 (877)
Q Consensus 311 aHqWfGnlVt~~~w-~d~WL~EGfa~y~~~~~~ 342 (877)
.|--.........- .--=|||||+..++..+.
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 99776543332221 123489999999986543
No 22
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=55.37 E-value=95 Score=30.79 Aligned_cols=98 Identities=10% Similarity=0.122 Sum_probs=64.7
Q ss_pred ChhhHHHHHHHHHH-HHHc--C----CCCHHHHHHHH-HhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHH-HHH
Q 002812 566 SETDRFGILDDHFA-LCMA--R----QQTLTSLLTLM-ASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFF 636 (877)
Q Consensus 566 ~~~~Ra~li~D~~~-la~~--g----~l~~~~~l~l~-~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~ 636 (877)
.-.+|..-+..+.. ++.. . ..+|..+++.+ +.|.++.+..+-..++..+..|.+-+.. ..|. .|.
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~ 102 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYV 102 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHH
Confidence 35667777777777 6542 1 34677778744 4566888999888888888887755531 2466 899
Q ss_pred HHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhc
Q 002812 637 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL 673 (877)
Q Consensus 637 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~ 673 (877)
..++.+++++++- . ...........+..++...
T Consensus 103 ~~llp~ll~~l~d-k---k~~V~~aa~~al~~i~~~~ 135 (249)
T 2qk1_A 103 SLVFTPLLDRTKE-K---KPSVIEAIRKALLTICKYY 135 (249)
T ss_dssp HHHHHHHHHGGGC-C---CHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHHHc
Confidence 9999999999972 2 1233344455555555555
No 23
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=51.70 E-value=5.2 Score=35.66 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=25.1
Q ss_pred ceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccccCcCc
Q 002812 279 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWT 325 (877)
Q Consensus 279 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~ 325 (877)
+++|+...+-+-. +...-...+..++.||+||.+ |.|-..+.|+
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHhf-e~lag~~gls 111 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHHL-ESLAGRDDLV 111 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHHH-HHHHTTC---
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHHH-HhhcccCCCC
Confidence 5566665332222 223345568999999999985 5455554444
No 24
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=38.43 E-value=24 Score=34.38 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999996
No 25
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=34.78 E-value=42 Score=32.06 Aligned_cols=13 Identities=54% Similarity=0.774 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 002812 302 VATVVAHELAHQW 314 (877)
Q Consensus 302 ~~~~iaHElaHqW 314 (877)
.+.++||||+|++
T Consensus 133 ~a~~~AHElGH~l 145 (197)
T 1bud_A 133 VAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhc
Confidence 6889999999995
No 26
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=34.49 E-value=41 Score=32.33 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 002812 302 VATVVAHELAHQW 314 (877)
Q Consensus 302 ~~~~iaHElaHqW 314 (877)
.+.++||||+|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 27
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=34.25 E-value=45 Score=32.03 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999995
No 28
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=33.52 E-value=53 Score=32.88 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 002812 299 KQRVATVVAHELAHQWFGN 317 (877)
Q Consensus 299 ~~~~~~~iaHElaHqWfGn 317 (877)
...++.+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 4568999999999975544
No 29
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=32.43 E-value=2.5e+02 Score=24.35 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=19.9
Q ss_pred EEEEEeCCCcCCceEEEEEEEEeeec
Q 002812 88 ILVLEFAETLPTGMGVLAIGFEGVLN 113 (877)
Q Consensus 88 ~l~i~l~~~l~~g~~~l~i~y~g~l~ 113 (877)
...+.++.++.||.|+|+..+.|+..
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEET
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeec
Confidence 34556777788899999999998764
No 30
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=28.96 E-value=59 Score=35.37 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999996
No 31
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=27.23 E-value=41 Score=32.35 Aligned_cols=13 Identities=38% Similarity=0.672 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 002812 302 VATVVAHELAHQW 314 (877)
Q Consensus 302 ~~~~iaHElaHqW 314 (877)
.+.++||||+|++
T Consensus 136 ~a~~~AHElGHnl 148 (202)
T 1atl_A 136 MGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eEEEehhhhcccc
Confidence 6789999999995
No 32
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=26.44 E-value=43 Score=31.98 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 002812 302 VATVVAHELAHQW 314 (877)
Q Consensus 302 ~~~~iaHElaHqW 314 (877)
.+.++||||+|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 33
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=26.21 E-value=2e+02 Score=24.02 Aligned_cols=22 Identities=9% Similarity=0.098 Sum_probs=15.7
Q ss_pred CeEEEEEeCCCcCCceEEEEEEE
Q 002812 86 DEILVLEFAETLPTGMGVLAIGF 108 (877)
Q Consensus 86 ~~~l~i~l~~~l~~g~~~l~i~y 108 (877)
...+.+.++ +|.+|.|+|.-+-
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wrv 85 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWRA 85 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777775 8999988765443
No 34
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=24.60 E-value=43 Score=32.20 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|..
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36889999999995
No 35
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=23.85 E-value=2.2e+02 Score=23.91 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=15.7
Q ss_pred CeEEEEEeCCCcCCceEEEEEEE
Q 002812 86 DEILVLEFAETLPTGMGVLAIGF 108 (877)
Q Consensus 86 ~~~l~i~l~~~l~~g~~~l~i~y 108 (877)
...+.+.++ +|.+|.|+|.-+-
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wrv 87 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWRA 87 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777776 8999988765443
No 36
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=22.74 E-value=87 Score=33.65 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999984
No 37
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=22.70 E-value=3.7e+02 Score=24.71 Aligned_cols=89 Identities=20% Similarity=0.209 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHH
Q 002812 660 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 739 (877)
Q Consensus 660 ~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~ 739 (877)
...|...+..++..+.++++....+.+ .+ -++..|.....++.. .|+......+.+... ..++.-|.
T Consensus 28 ~~vr~~A~~~L~~~~~~~~~~~L~~~l----~~-----~~~~vr~~a~~~L~~---~~~~~~~~~L~~~l~-d~~~~vr~ 94 (201)
T 3ltj_A 28 YYVRRAAAYALGKIGDERAVEPLIKAL----KD-----EDAWVRRAAADALGQ---IGDERAVEPLIKALK-DEDGWVRQ 94 (201)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHHT----TC-----SSHHHHHHHHHHHHH---HCCGGGHHHHHHHTT-CSSHHHHH
T ss_pred HHHHHHHHHHHHhcCChhHHHHHHHHH----cC-----CCHHHHHHHHHHHHh---hCCHHHHHHHHHHHc-CCCHHHHH
Confidence 356777777777888766655544333 22 146677654444332 456666777777654 45677888
Q ss_pred HHHHHhCCCCCHHHHHHHHHHh
Q 002812 740 RILSSLASCPDVNIVLEVLNFL 761 (877)
Q Consensus 740 ~~l~aL~cs~d~~ll~~~L~~~ 761 (877)
..+.+|+...++..+..++..+
T Consensus 95 ~a~~aL~~~~~~~~~~~L~~~l 116 (201)
T 3ltj_A 95 SAAVALGQIGDERAVEPLIKAL 116 (201)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHT
T ss_pred HHHHHHHHhCcHHHHHHHHHHH
Confidence 8888888877777676666654
No 38
>3s51_A Protein FACI, fanconi anemia group I protein homolog; DNA repair, DNA binding protein; 3.30A {Mus musculus} PDB: 3s4z_A* 3s4w_A
Probab=22.55 E-value=1.7e+02 Score=36.34 Aligned_cols=140 Identities=9% Similarity=-0.011 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHccC-CC----hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhc
Q 002812 549 DKDLAARLGYAIEMKQ-LS----ETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAAD 623 (877)
Q Consensus 549 d~~~w~~l~~~l~~~~-i~----~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~ 623 (877)
+..+|..|.+.+-.+. .+ ..-|.++..-...+...|.++...+.+++..|..|-+..|=.......+..-+.++.
T Consensus 39 ~~~~~~~ll~~i~~~~~~s~~~~~~~r~~v~~~~~~~l~~~~l~~~~~~dii~~L~~el~~lp~~~Lv~l~~~~v~~ir~ 118 (1308)
T 3s51_A 39 KGRAVGTLLRAVLKGSPCSEEDGALRRYKIYSCCIQLVESGDLQQDVASEIIGLLMLEVHHFPGPLLVDLASDFVGAVRE 118 (1308)
T ss_dssp CHHHHHTHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHS
T ss_pred CCccHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHc
Confidence 3456777777665432 22 234778888889999999999999999999999988777766666666665555553
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHh
Q 002812 624 ARPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLG-HKETLNEASKRFHAF 689 (877)
Q Consensus 624 ~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g-~~~c~~~a~~~f~~~ 689 (877)
.++.. ..+++.+-..+..+..+-+.-...+....-...+..+++..|... ++.|+-....+|++.
T Consensus 119 g~~~~-~~wldLLP~~Ls~L~~~~~~i~~g~~e~sG~Eyk~~iI~~Lcs~~W~~~~li~l~~mFrDv 184 (1308)
T 3s51_A 119 DRLVN-GKSLELLPIILTALATKKEVLACGKGDLNGEEYKRQLIDTLCSVRWPQRYMIQLTSVFKDV 184 (1308)
T ss_dssp CCCSC-STTTTHHHHHHHHHHTCCSCCSSSSCCCCHHHHHHHHHHHHHHSCCCTTTHHHHHHHGGGS
T ss_pred CCccc-CcHHHHHHHHHHHHHcccchhhcCCCccchHHHHHHHHHHHHhcCCcHHHHHHHHHHHHcC
Confidence 32222 223333333333332221111111122344577888888888865 445666666666554
No 39
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=22.44 E-value=43 Score=36.52 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
.++.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999995
No 40
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=21.48 E-value=1.2e+02 Score=34.06 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=32.2
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcce
Q 002812 407 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 460 (877)
Q Consensus 407 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~ 460 (877)
+.++.-..-+.+|+.. |..+.....++.+..++..|.|++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777631 22222234455556666667899998777776666664
No 41
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=20.90 E-value=55 Score=35.54 Aligned_cols=14 Identities=43% Similarity=0.710 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
.++.++||||+|++
T Consensus 136 ~~a~t~AHElGHnl 149 (419)
T 2dw0_A 136 VVAVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999996
No 42
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=20.56 E-value=86 Score=33.99 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 002812 301 RVATVVAHELAHQW 314 (877)
Q Consensus 301 ~~~~~iaHElaHqW 314 (877)
..+.++||||+|..
T Consensus 143 ~~a~t~AHElGHnl 156 (422)
T 3k7l_A 143 MVAITMAHEMGHNL 156 (422)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHc
Confidence 46889999999984
No 43
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.24 E-value=55 Score=28.23 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=22.6
Q ss_pred cceeeecccccccCCCChhHHHHHHHHHHHHHHHHHH
Q 002812 278 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 314 (877)
Q Consensus 278 gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 314 (877)
-+++||....-.- .+...-...+..++.||+||..
T Consensus 68 rI~lYR~Pi~~~~--~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 68 RIIIYRNTICALC--ETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEHHHHHHTC--SSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEehHHHHHHh--CChhHHHHHHHHHHHHHHHHHc
Confidence 3666776632222 2334455668899999999984
Done!